Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70153.t1 | XP_003630391.1 | 98.1 | 516 | 10 | 0 | 1 | 516 | 84 | 599 | 3.20E-296 | 1026.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70153.t1 | Q9STW5 | 65.8 | 517 | 171 | 5 | 1 | 515 | 89 | 601 | 1.3e-194 | 680.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70153.t1 | A0A072TTW0 | 98.1 | 516 | 10 | 0 | 1 | 516 | 1 | 516 | 2.3e-296 | 1026.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055636 | MS.gene70153 | -0.801452 | 8.95E-49 | -1.69E-46 |
| MS.gene058323 | MS.gene70153 | -0.80249 | 5.47E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene70153 | -0.801633 | 8.21E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70153.t1 | MTR_8g095090 | 98.062 | 516 | 10 | 0 | 1 | 516 | 84 | 599 | 0.0 | 1052 |
| MS.gene70153.t1 | MTR_8g095090 | 98.062 | 516 | 10 | 0 | 1 | 516 | 1 | 516 | 0.0 | 1051 |
| MS.gene70153.t1 | MTR_2g005730 | 67.773 | 512 | 160 | 4 | 1 | 510 | 90 | 598 | 0.0 | 716 |
| MS.gene70153.t1 | MTR_4g088500 | 52.682 | 522 | 230 | 7 | 1 | 508 | 96 | 614 | 0.0 | 527 |
| MS.gene70153.t1 | MTR_8g095140 | 47.945 | 511 | 229 | 9 | 1 | 507 | 100 | 577 | 7.53e-156 | 456 |
| MS.gene70153.t1 | MTR_8g095110 | 47.601 | 521 | 234 | 7 | 1 | 516 | 89 | 575 | 8.97e-155 | 454 |
| MS.gene70153.t1 | MTR_8g097210 | 45.009 | 531 | 257 | 10 | 1 | 505 | 1 | 522 | 9.97e-151 | 441 |
| MS.gene70153.t1 | MTR_8g097210 | 45.009 | 531 | 257 | 10 | 1 | 505 | 95 | 616 | 3.85e-149 | 441 |
| MS.gene70153.t1 | MTR_3g084930 | 43.820 | 534 | 264 | 11 | 1 | 505 | 91 | 617 | 3.18e-142 | 423 |
| MS.gene70153.t1 | MTR_8g095150 | 44.814 | 511 | 234 | 10 | 1 | 507 | 87 | 553 | 3.00e-138 | 410 |
| MS.gene70153.t1 | MTR_8g095130 | 45.791 | 487 | 232 | 9 | 31 | 512 | 11 | 470 | 2.64e-137 | 405 |
| MS.gene70153.t1 | MTR_2g005730 | 65.306 | 294 | 97 | 4 | 1 | 292 | 90 | 380 | 1.62e-131 | 389 |
| MS.gene70153.t1 | MTR_8g105700 | 42.664 | 518 | 239 | 10 | 1 | 505 | 80 | 552 | 4.09e-129 | 387 |
| MS.gene70153.t1 | MTR_2g017740 | 41.506 | 518 | 242 | 9 | 1 | 505 | 95 | 564 | 2.68e-121 | 367 |
| MS.gene70153.t1 | MTR_7g116350 | 41.372 | 452 | 165 | 12 | 65 | 508 | 443 | 802 | 2.03e-89 | 291 |
| MS.gene70153.t1 | MTR_4g027860 | 39.828 | 349 | 174 | 8 | 170 | 505 | 79 | 404 | 5.40e-73 | 237 |
| MS.gene70153.t1 | MTR_4g027880 | 46.835 | 79 | 42 | 0 | 1 | 79 | 87 | 165 | 7.56e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70153.t1 | AT4G24290 | 65.764 | 517 | 171 | 5 | 1 | 515 | 89 | 601 | 0.0 | 696 |
| MS.gene70153.t1 | AT4G24290 | 65.764 | 517 | 171 | 5 | 1 | 515 | 89 | 601 | 0.0 | 696 |
| MS.gene70153.t1 | AT1G28380 | 51.238 | 525 | 235 | 10 | 1 | 511 | 92 | 609 | 1.65e-169 | 493 |
| MS.gene70153.t1 | AT1G14780 | 43.071 | 534 | 271 | 12 | 1 | 505 | 89 | 618 | 8.38e-136 | 407 |
| MS.gene70153.t1 | AT1G29690 | 41.333 | 525 | 226 | 9 | 1 | 505 | 97 | 559 | 1.37e-124 | 376 |
| MS.gene70153.t1 | AT4G24290 | 59.200 | 250 | 96 | 4 | 1 | 246 | 89 | 336 | 2.81e-96 | 296 |
Find 145 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTACTTGGTGGAATAAA+TGG | 0.173122 | 4.1:+7575212 | MS.gene70153:CDS |
| TTCAGGTTCATTGAGAAATA+TGG | 0.209882 | 4.1:+7573779 | MS.gene70153:intron |
| AACAGGCCTTCGATTGTATT+TGG | 0.219951 | 4.1:+7576733 | MS.gene70153:CDS |
| ACATCGTAAATAGAGATTTA+TGG | 0.220471 | 4.1:-7575255 | None:intergenic |
| AGGCAATGGGCCCCTGTATT+TGG | 0.223085 | 4.1:+7576021 | MS.gene70153:CDS |
| CACAAGATTTGCCTGGTTAC+TGG | 0.270535 | 4.1:+7577266 | MS.gene70153:CDS |
| TCCTGCAGTTGGAATGTCTT+AGG | 0.286470 | 4.1:-7576809 | None:intergenic |
| ATCTTTACAGTTCAGTTTCA+TGG | 0.289052 | 4.1:+7576089 | MS.gene70153:CDS |
| CCTGGTTACTGGGTTGTGTC+GGG | 0.291638 | 4.1:+7577277 | MS.gene70153:CDS |
| GCTGTAGTTGGGGTGAAAAT+AGG | 0.301197 | 4.1:+7573809 | MS.gene70153:CDS |
| CTGTAGTTGGGGTGAAAATA+GGG | 0.304438 | 4.1:+7573810 | MS.gene70153:CDS |
| TCAACAAACTTCAGAAGTTT+AGG | 0.306525 | 4.1:-7577220 | None:intergenic |
| CACTTTGAAGTGGGAGAAAC+TGG | 0.314393 | 4.1:+7576965 | MS.gene70153:CDS |
| CTGCTTTGCATATATTATAT+CGG | 0.324889 | 4.1:-7573837 | None:intergenic |
| TACAATCGAAGGCCTGTTAC+AGG | 0.329460 | 4.1:-7576728 | None:intergenic |
| ACATGGCAGACGAATTATTC+AGG | 0.339855 | 4.1:+7573909 | MS.gene70153:CDS |
| TGATGCAGTTCTTCAATTGC+TGG | 0.340098 | 4.1:-7575976 | None:intergenic |
| AGGAAAGAAAAGTAATTGTT+TGG | 0.366018 | 4.1:+7576757 | MS.gene70153:CDS |
| GGGAGGATAGGTGCTGTAAA+TGG | 0.370254 | 4.1:-7576784 | None:intergenic |
| TGCAAGAGGAAAGGTGGAAA+TGG | 0.378051 | 4.1:+7575104 | MS.gene70153:CDS |
| CCTGGCTTGACTCAGAAATC+TGG | 0.389891 | 4.1:+7577073 | MS.gene70153:CDS |
| CCACCAAGTAGAGATGTAAT+TGG | 0.395115 | 4.1:-7575203 | None:intergenic |
| GCCTGGTTACTGGGTTGTGT+CGG | 0.401562 | 4.1:+7577276 | MS.gene70153:CDS |
| CCAGGAGAACCATCCCATTC+CGG | 0.402482 | 4.1:-7577055 | None:intergenic |
| CTCTGCGACTTCTTCCTATC+AGG | 0.407497 | 4.1:-7576060 | None:intergenic |
| GTAGGAATGAAGCCTGTAAC+AGG | 0.410479 | 4.1:+7576716 | MS.gene70153:CDS |
| GGCATTTAATTCAAAAGAAA+AGG | 0.411840 | 4.1:+7573964 | MS.gene70153:CDS |
| AGGGCCTCCTGTGCCTGCTC+AGG | 0.416486 | 4.1:+7577195 | MS.gene70153:CDS |
| CCGGAATGGGATGGTTCTCC+TGG | 0.421354 | 4.1:+7577055 | MS.gene70153:CDS |
| GGACAATGGACTAGGATTCC+TGG | 0.425003 | 4.1:+7574676 | MS.gene70153:CDS |
| CCCATTCCGGCGCTCTCACA+CGG | 0.430776 | 4.1:-7577042 | None:intergenic |
| AACCAGGAGGTGTCACTGTC+TGG | 0.436200 | 4.1:+7573077 | MS.gene70153:CDS |
| ACAAGATTTGCCTGGTTACT+GGG | 0.437969 | 4.1:+7577267 | MS.gene70153:CDS |
| GCAGGCACAGGAGGCCCTCC+AGG | 0.439934 | 4.1:-7577190 | None:intergenic |
| TTGTCATCGTAGGGTTCAAC+AGG | 0.442295 | 4.1:-7576923 | None:intergenic |
| GTATTTGGTGAGCTTGCCCT+TGG | 0.446594 | 4.1:+7576036 | MS.gene70153:CDS |
| TAACTTTCTGTCTCTTCATC+CGG | 0.447066 | 4.1:-7577370 | None:intergenic |
| TCTTTACAGTTCAGTTTCAT+GGG | 0.453459 | 4.1:+7576090 | MS.gene70153:CDS |
| GCAAGAGGAAAGGTGGAAAT+GGG | 0.457669 | 4.1:+7575105 | MS.gene70153:CDS |
| ACGTCCGATGGCTGTGGTGG+CGG | 0.457757 | 4.1:-7577145 | None:intergenic |
| AATGACATTGATATTACATC+AGG | 0.457909 | 4.1:-7575176 | None:intergenic |
| AGGGCAAGCTCACCAAATAC+AGG | 0.462328 | 4.1:-7576033 | None:intergenic |
| CTCTACTTGGTGGAATAAAT+GGG | 0.463188 | 4.1:+7575213 | MS.gene70153:CDS |
| ATCATGGGATCCCGCTGCAC+TGG | 0.464186 | 4.1:+7573274 | MS.gene70153:CDS |
| GGACAAAATAACGCTAATGA+TGG | 0.464451 | 4.1:+7573941 | MS.gene70153:CDS |
| ACTGAAACGCAGAATTGAAA+TGG | 0.467660 | 4.1:-7573115 | None:intergenic |
| CTGGTTACTGGGTTGTGTCG+GGG | 0.469376 | 4.1:+7577278 | MS.gene70153:CDS |
| CAGGTTGAGACAAAACAGTT+TGG | 0.471428 | 4.1:-7575157 | None:intergenic |
| AACAAGCTGTTCCTTCATCA+TGG | 0.471704 | 4.1:+7573258 | MS.gene70153:CDS |
| AAGTACCTTGCCAGTGCAGC+GGG | 0.471772 | 4.1:-7573284 | None:intergenic |
| GACAAAATAACGCTAATGAT+GGG | 0.475381 | 4.1:+7573942 | MS.gene70153:CDS |
| CCCGTGTGAGAGCGCCGGAA+TGG | 0.475856 | 4.1:+7577041 | MS.gene70153:CDS |
| TATGGAACCCATGCTGTAGT+TGG | 0.476255 | 4.1:+7573797 | MS.gene70153:CDS |
| CCGTGTGAGAGCGCCGGAAT+GGG | 0.478499 | 4.1:+7577042 | MS.gene70153:CDS |
| CCTGCAGTTGGAATGTCTTA+GGG | 0.480519 | 4.1:-7576808 | None:intergenic |
| CTCTTCATCCGGTAAAATCA+TGG | 0.483292 | 4.1:-7577359 | None:intergenic |
| GAATTATTCAGGGGCCAGGC+TGG | 0.483653 | 4.1:+7573920 | MS.gene70153:CDS |
| CTGTCTGGTAAGATTCCAAC+AGG | 0.484770 | 4.1:+7573092 | MS.gene70153:CDS |
| ATGGAACCCATGCTGTAGTT+GGG | 0.484856 | 4.1:+7573798 | MS.gene70153:CDS |
| GATGTGTTTACATAGAGCTT+AGG | 0.487249 | 4.1:-7576114 | None:intergenic |
| GTTTCAGCTTCCAAGGCAAT+GGG | 0.490214 | 4.1:+7576008 | MS.gene70153:CDS |
| AAATATTTACCTCTGTTTCA+CGG | 0.491033 | 4.1:-7574718 | None:intergenic |
| AGTTTCAGCTTCCAAGGCAA+TGG | 0.494982 | 4.1:+7576007 | MS.gene70153:CDS |
| CCCGACACAACCCAGTAACC+AGG | 0.503851 | 4.1:-7577277 | None:intergenic |
| GATGACAACGCTGTTGTGAC+TGG | 0.505109 | 4.1:+7576938 | MS.gene70153:CDS |
| AATACAGGGGCCCATTGCCT+TGG | 0.505547 | 4.1:-7576018 | None:intergenic |
| AGAACGTAAATATTATGAAA+AGG | 0.509241 | 4.1:+7576865 | MS.gene70153:CDS |
| GGCCTTCGATTGTATTTGGA+AGG | 0.513342 | 4.1:+7576737 | MS.gene70153:CDS |
| TGGTTACTGGGTTGTGTCGG+GGG | 0.513759 | 4.1:+7577279 | MS.gene70153:CDS |
| GATTAGTCTCGTCCTGCAGT+TGG | 0.514559 | 4.1:-7576820 | None:intergenic |
| TACCAGACAGTGACACCTCC+TGG | 0.517330 | 4.1:-7573079 | None:intergenic |
| ATGTCTTAGGGAGGGAGGAT+AGG | 0.518519 | 4.1:-7576796 | None:intergenic |
| GGTGCCTGAGCAGGCACAGG+AGG | 0.519880 | 4.1:-7577199 | None:intergenic |
| ATAATATTTACGTTCTGAAG+AGG | 0.520688 | 4.1:-7576858 | None:intergenic |
| TGTAGTTGGGGTGAAAATAG+GGG | 0.521680 | 4.1:+7573811 | MS.gene70153:CDS |
| ACATTTACGTCCGATGGCTG+TGG | 0.522565 | 4.1:-7577151 | None:intergenic |
| TTCCTTCCAAATACAATCGA+AGG | 0.523301 | 4.1:-7576739 | None:intergenic |
| AGACGAATTATTCAGGGGCC+AGG | 0.525443 | 4.1:+7573916 | MS.gene70153:CDS |
| TTTATGAGGGACAATGGACT+AGG | 0.526501 | 4.1:+7574668 | MS.gene70153:CDS |
| GACTGGTGCTCACTTTGAAG+TGG | 0.527063 | 4.1:+7576955 | MS.gene70153:CDS |
| ATACCAATTACATCTCTACT+TGG | 0.528757 | 4.1:+7575200 | MS.gene70153:CDS |
| CCAGATTTCTGAGTCAAGCC+AGG | 0.528793 | 4.1:-7577073 | None:intergenic |
| CCCTAAGACATTCCAACTGC+AGG | 0.531837 | 4.1:+7576808 | MS.gene70153:CDS |
| AGAAGTTTAGGTGCCTGAGC+AGG | 0.531964 | 4.1:-7577208 | None:intergenic |
| CCAATTACATCTCTACTTGG+TGG | 0.533413 | 4.1:+7575203 | MS.gene70153:CDS |
| TTTATGTGCAAGAGGAAAGG+TGG | 0.534940 | 4.1:+7575098 | MS.gene70153:CDS |
| TTAGGTGCCTGAGCAGGCAC+AGG | 0.536783 | 4.1:-7577202 | None:intergenic |
| ACCAAGAGTCTTGCTTTCGA+TGG | 0.538520 | 4.1:+7573170 | MS.gene70153:CDS |
| AGAGGACCACAAGATTTGCC+TGG | 0.539438 | 4.1:+7577259 | MS.gene70153:CDS |
| GATGTCAGAGCAGTTCAACC+AGG | 0.542518 | 4.1:+7573061 | None:intergenic |
| AGCTTGCCCTTGGTCCTGAT+AGG | 0.545252 | 4.1:+7576046 | MS.gene70153:CDS |
| ATTTACCTCTGTTTCACGGT+AGG | 0.545369 | 4.1:-7574714 | None:intergenic |
| CTTGGTGGAATAAATGGGAG+TGG | 0.546225 | 4.1:+7575218 | MS.gene70153:CDS |
| AGGATTGAGCTTGAATGTCC+AGG | 0.547656 | 4.1:-7574694 | None:intergenic |
| GAGTTCACATTTACGTCCGA+TGG | 0.548325 | 4.1:-7577157 | None:intergenic |
| TTTCACCCCAACTACAGCAT+GGG | 0.554948 | 4.1:-7573804 | None:intergenic |
| GGGAGAAACTGGTCTGAAGA+AGG | 0.557980 | 4.1:+7576976 | MS.gene70153:CDS |
| AACTCTGCTTTATACCCTGG+AGG | 0.559576 | 4.1:+7577175 | MS.gene70153:CDS |
| GTGAGAGCGCCGGAATGGGA+TGG | 0.561426 | 4.1:+7577046 | MS.gene70153:CDS |
| GCAGAATTGAAATGGCCTGT+TGG | 0.563332 | 4.1:-7573107 | None:intergenic |
| TGCATCCCGTGTGAGAGCGC+CGG | 0.564781 | 4.1:+7577036 | MS.gene70153:CDS |
| GGGATCCCGCTGCACTGGCA+AGG | 0.568140 | 4.1:+7573279 | MS.gene70153:CDS |
| GCCATCGAAAGCAAGACTCT+TGG | 0.568546 | 4.1:-7573171 | None:intergenic |
| GCTGCCGCCACCACAGCCAT+CGG | 0.569256 | 4.1:+7577141 | MS.gene70153:CDS |
| CCCCAGTTTATGAGGGACAA+TGG | 0.569449 | 4.1:+7574662 | MS.gene70153:intron |
| ACAAGCTGTTCCTTCATCAT+GGG | 0.571304 | 4.1:+7573259 | MS.gene70153:CDS |
| CATGGCAGACGAATTATTCA+GGG | 0.572428 | 4.1:+7573910 | MS.gene70153:CDS |
| AACTTCTTGTAGGTCGATGT+AGG | 0.574111 | 4.1:+7576698 | MS.gene70153:intron |
| GCAGCGGGATCCCATGATGA+AGG | 0.574310 | 4.1:-7573269 | None:intergenic |
| TATGAGAGAAGCTCTTCCAC+TGG | 0.578760 | 4.1:-7576889 | None:intergenic |
| GTGAACTCTGCTTTATACCC+TGG | 0.583406 | 4.1:+7577172 | MS.gene70153:CDS |
| CAGTTTGGCACCACTCATTG+TGG | 0.583966 | 4.1:-7575142 | None:intergenic |
| GGCAAGGCTTTATGTCGAGA+AGG | 0.584563 | 4.1:+7577300 | MS.gene70153:CDS |
| CACAACAGCGTTGTCATCGT+AGG | 0.586709 | 4.1:-7576933 | None:intergenic |
| GAGCTTCTCTCATATTTGCA+CGG | 0.587829 | 4.1:+7576898 | MS.gene70153:CDS |
| AAGTTTATGTGCAAGAGGAA+AGG | 0.589600 | 4.1:+7575095 | MS.gene70153:CDS |
| GGGCAAGCTCACCAAATACA+GGG | 0.595006 | 4.1:-7576032 | None:intergenic |
| ATATAAAGTTTATGTGCAAG+AGG | 0.596880 | 4.1:+7575090 | MS.gene70153:CDS |
| AAAATCTCAGCCACAATGAG+TGG | 0.599869 | 4.1:+7575132 | MS.gene70153:CDS |
| CAGGCACAGGAGGCCCTCCA+GGG | 0.600964 | 4.1:-7577189 | None:intergenic |
| TGCTATGTTGTAGAGTGTGA+TGG | 0.603492 | 4.1:-7573198 | None:intergenic |
| ACAACAGCGTTGTCATCGTA+GGG | 0.605251 | 4.1:-7576932 | None:intergenic |
| AAAGTACCTTGCCAGTGCAG+CGG | 0.617410 | 4.1:-7573285 | None:intergenic |
| ACTGGTGCTCACTTTGAAGT+GGG | 0.625192 | 4.1:+7576956 | MS.gene70153:CDS |
| TTTACGTCCGATGGCTGTGG+TGG | 0.625886 | 4.1:-7577148 | None:intergenic |
| CCATTCCGGCGCTCTCACAC+GGG | 0.626310 | 4.1:-7577041 | None:intergenic |
| ACTCTGCTTTATACCCTGGA+GGG | 0.628094 | 4.1:+7577176 | MS.gene70153:CDS |
| CAGTTGGAATGTCTTAGGGA+GGG | 0.629873 | 4.1:-7576804 | None:intergenic |
| GCTCTATGTAAACACATCAC+CGG | 0.630530 | 4.1:+7576119 | MS.gene70153:CDS |
| GCAGTTGGAATGTCTTAGGG+AGG | 0.632346 | 4.1:-7576805 | None:intergenic |
| GTAGTTGGGGTGAAAATAGG+GGG | 0.632775 | 4.1:+7573812 | MS.gene70153:CDS |
| ACTTCTTCCTATCAGGACCA+AGG | 0.634932 | 4.1:-7576053 | None:intergenic |
| AATATTATGAAAAGGTCCAG+TGG | 0.637646 | 4.1:+7576873 | MS.gene70153:CDS |
| CAGTAACCAGGCAAATCTTG+TGG | 0.638344 | 4.1:-7577265 | None:intergenic |
| TTGGAATGTCTTAGGGAGGG+AGG | 0.641738 | 4.1:-7576801 | None:intergenic |
| TGTACATCAGAAGGTTGGAG+AGG | 0.642552 | 4.1:-7573872 | None:intergenic |
| ACAAAATAACGCTAATGATG+GGG | 0.646611 | 4.1:+7573943 | MS.gene70153:CDS |
| CTTCTTCCTATCAGGACCAA+GGG | 0.648164 | 4.1:-7576052 | None:intergenic |
| GCAAGGCTTTATGTCGAGAA+GGG | 0.657734 | 4.1:+7577301 | MS.gene70153:CDS |
| TGGAACCCATGCTGTAGTTG+GGG | 0.658404 | 4.1:+7573799 | MS.gene70153:CDS |
| TCAATCCTACCGTGAAACAG+AGG | 0.667846 | 4.1:+7574709 | MS.gene70153:CDS |
| GTCAGAGCAGTTCAACCAGG+AGG | 0.677917 | 4.1:+7573064 | MS.gene70153:CDS |
| GACACAACAGAAATGACTAG+AGG | 0.699740 | 4.1:+7577241 | MS.gene70153:CDS |
| GGCAAGCTCACCAAATACAG+GGG | 0.700077 | 4.1:-7576031 | None:intergenic |
| ATGGCAGACGAATTATTCAG+GGG | 0.728348 | 4.1:+7573911 | MS.gene70153:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTAAAAATTATAGAATAAC+AGG | - | chr4.1:7575601-7575620 | None:intergenic | 15.0% |
| !! | TTAAATAAGTAAATGACTAA+AGG | - | chr4.1:7575299-7575318 | None:intergenic | 15.0% |
| !! | TTTCTTTCAAAAGAATATTT+AGG | + | chr4.1:7573450-7573469 | MS.gene70153:intron | 15.0% |
| !!! | AAAAATTTAACTTGAGATTT+TGG | - | chr4.1:7576488-7576507 | None:intergenic | 15.0% |
| !!! | TAAAATTATTTTCCTTACTA+GGG | + | chr4.1:7575008-7575027 | MS.gene70153:intron | 15.0% |
| !!! | TTTTATAATTTATATTGCTG+TGG | + | chr4.1:7574852-7574871 | MS.gene70153:intron | 15.0% |
| !! | AAACCTGATAAAAAGAAAAT+AGG | - | chr4.1:7574810-7574829 | None:intergenic | 20.0% |
| !! | AAATAATATATCTCCCATTA+AGG | - | chr4.1:7574536-7574555 | None:intergenic | 20.0% |
| !! | AACTAATTCAAAAGCTTAAA+CGG | + | chr4.1:7576215-7576234 | MS.gene70153:intron | 20.0% |
| !! | AATCTTCCATAAAAGAATAA+TGG | - | chr4.1:7575740-7575759 | None:intergenic | 20.0% |
| !! | AGAACGTAAATATTATGAAA+AGG | + | chr4.1:7576865-7576884 | MS.gene70153:CDS | 20.0% |
| !! | AGAATAAAAGAAAAAAGAAC+CGG | - | chr4.1:7574002-7574021 | None:intergenic | 20.0% |
| !! | GTAGATATCAAGATTTATTT+GGG | + | chr4.1:7574291-7574310 | MS.gene70153:intron | 20.0% |
| !! | TAGATATCAAGATTTATTTG+GGG | + | chr4.1:7574292-7574311 | MS.gene70153:intron | 20.0% |
| !! | TATATCATGTTATATGTTAG+AGG | + | chr4.1:7574336-7574355 | MS.gene70153:intron | 20.0% |
| !! | TCAAAAAATTTATACATCTG+CGG | - | chr4.1:7575355-7575374 | None:intergenic | 20.0% |
| !! | TGTAGATATCAAGATTTATT+TGG | + | chr4.1:7574290-7574309 | MS.gene70153:intron | 20.0% |
| !!! | AGTTTGTATTTGTTGATTTT+AGG | + | chr4.1:7574208-7574227 | MS.gene70153:intron | 20.0% |
| !!! | ATTTTTCCAATAAAATTGTC+AGG | + | chr4.1:7576502-7576521 | MS.gene70153:intron | 20.0% |
| !!! | CTAAAATTATTTTCCTTACT+AGG | + | chr4.1:7575007-7575026 | MS.gene70153:intron | 20.0% |
| !!! | CTTTTATTCTCTTTGATTTA+AGG | + | chr4.1:7574012-7574031 | MS.gene70153:intron | 20.0% |
| !!! | GGTAATGTAATTTTTTGTTT+AGG | - | chr4.1:7574599-7574618 | None:intergenic | 20.0% |
| !!! | GTTTGTATTTGTTGATTTTA+GGG | + | chr4.1:7574209-7574228 | MS.gene70153:intron | 20.0% |
| ! | AAATATTTACCTCTGTTTCA+CGG | - | chr4.1:7574721-7574740 | None:intergenic | 25.0% |
| ! | AAATGTTAGAATGAATCCAA+AGG | + | chr4.1:7574509-7574528 | MS.gene70153:intron | 25.0% |
| ! | AACATGATATAGAATGCTAA+AGG | - | chr4.1:7574327-7574346 | None:intergenic | 25.0% |
| ! | AATGACATTGATATTACATC+AGG | - | chr4.1:7575179-7575198 | None:intergenic | 25.0% |
| ! | AATGGGAGATATATTATTTC+TGG | + | chr4.1:7574537-7574556 | MS.gene70153:intron | 25.0% |
| ! | ACATAAGTTCATAACACATA+AGG | - | chr4.1:7573412-7573431 | None:intergenic | 25.0% |
| ! | ACATCGTAAATAGAGATTTA+TGG | - | chr4.1:7575258-7575277 | None:intergenic | 25.0% |
| ! | ACATGATATAGAATGCTAAA+GGG | - | chr4.1:7574326-7574345 | None:intergenic | 25.0% |
| ! | AGGAAAGAAAAGTAATTGTT+TGG | + | chr4.1:7576757-7576776 | MS.gene70153:CDS | 25.0% |
| ! | ATATAAAGTTTATGTGCAAG+AGG | + | chr4.1:7575090-7575109 | MS.gene70153:CDS | 25.0% |
| ! | ATGATTAATGAGAAAATCAC+AGG | - | chr4.1:7576305-7576324 | None:intergenic | 25.0% |
| ! | ATTAGTAGTAGTAATTGTGT+GGG | - | chr4.1:7575545-7575564 | None:intergenic | 25.0% |
| ! | ATTCCACTGAAAAATTATGT+CGG | + | chr4.1:7575505-7575524 | MS.gene70153:intron | 25.0% |
| ! | CAAAGATAAAAACAAGCAAT+TGG | - | chr4.1:7576180-7576199 | None:intergenic | 25.0% |
| ! | CTGCTTTGCATATATTATAT+CGG | - | chr4.1:7573840-7573859 | None:intergenic | 25.0% |
| ! | CTTATGTGATTAATAAGAGA+TGG | + | chr4.1:7573425-7573444 | MS.gene70153:intron | 25.0% |
| ! | GAATAAAAGAAAAAAGAACC+GGG | - | chr4.1:7574001-7574020 | None:intergenic | 25.0% |
| ! | GGCATTTAATTCAAAAGAAA+AGG | + | chr4.1:7573964-7573983 | MS.gene70153:CDS | 25.0% |
| ! | TACAAATGTGGAGAATTATA+TGG | + | chr4.1:7576665-7576684 | MS.gene70153:intron | 25.0% |
| ! | TATTAGTAGTAGTAATTGTG+TGG | - | chr4.1:7575546-7575565 | None:intergenic | 25.0% |
| ! | TGATGTACAGAAAAAATTGA+AGG | + | chr4.1:7573886-7573905 | MS.gene70153:CDS | 25.0% |
| ! | TGATTAATGAGAAAATCACA+GGG | - | chr4.1:7576304-7576323 | None:intergenic | 25.0% |
| ! | TTTGTATTTGAAAAGTTCCT+GGG | + | chr4.1:7574926-7574945 | MS.gene70153:intron | 25.0% |
| !! | GTTTAAGCTTTTGAATTAGT+TGG | - | chr4.1:7576216-7576235 | None:intergenic | 25.0% |
| !! | TCTTTTAACCATGATTTTAC+CGG | + | chr4.1:7577351-7577370 | MS.gene70153:CDS | 25.0% |
| !! | TCTTTTCATTGTATCATTTC+AGG | + | chr4.1:7573762-7573781 | MS.gene70153:intron | 25.0% |
| !! | TTGCCTATTTTCTTTTTATC+AGG | + | chr4.1:7574804-7574823 | MS.gene70153:intron | 25.0% |
| !! | TTTAGGACATGCAAAAATAA+AGG | + | chr4.1:7573467-7573486 | MS.gene70153:intron | 25.0% |
| !!! | AATTTTTTCTGTACATCAGA+AGG | - | chr4.1:7573884-7573903 | None:intergenic | 25.0% |
| !!! | ATAATATTTACGTTCTGAAG+AGG | - | chr4.1:7576861-7576880 | None:intergenic | 25.0% |
| !!! | ATAATTTTTCAGTGGAATGT+TGG | - | chr4.1:7575503-7575522 | None:intergenic | 25.0% |
| !!! | CAATTGCTTGTTTTTATCTT+TGG | + | chr4.1:7576178-7576197 | MS.gene70153:intron | 25.0% |
| AAAGATGTATATGTGATGCA+AGG | - | chr4.1:7576440-7576459 | None:intergenic | 30.0% | |
| AAGAGACAGAAAGTTATTGA+GGG | + | chr4.1:7577377-7577396 | MS.gene70153:CDS | 30.0% | |
| AAGATGTATATGTGATGCAA+GGG | - | chr4.1:7576439-7576458 | None:intergenic | 30.0% | |
| AATATTATGAAAAGGTCCAG+TGG | + | chr4.1:7576873-7576892 | MS.gene70153:CDS | 30.0% | |
| AATTTATATTGCTGTGGAAC+TGG | + | chr4.1:7574858-7574877 | MS.gene70153:intron | 30.0% | |
| ACAAAATAACGCTAATGATG+GGG | + | chr4.1:7573943-7573962 | MS.gene70153:CDS | 30.0% | |
| ACAGAAAAAATTGAAGGACA+TGG | + | chr4.1:7573892-7573911 | MS.gene70153:CDS | 30.0% | |
| ACCTAAAATGTTTAACGAGA+AGG | - | chr4.1:7575065-7575084 | None:intergenic | 30.0% | |
| ACGTTGCAAAATTACAAATG+TGG | + | chr4.1:7576653-7576672 | MS.gene70153:intron | 30.0% | |
| ATACCAATTACATCTCTACT+TGG | + | chr4.1:7575200-7575219 | MS.gene70153:CDS | 30.0% | |
| ATAGCTAAACATAAAGCAAG+AGG | - | chr4.1:7573343-7573362 | None:intergenic | 30.0% | |
| ATCTTTACAGTTCAGTTTCA+TGG | + | chr4.1:7576089-7576108 | MS.gene70153:CDS | 30.0% | |
| ATGAGAAACAAATACTGTTG+TGG | + | chr4.1:7575806-7575825 | MS.gene70153:intron | 30.0% | |
| CATTTACATGAGAAATGTTG+TGG | - | chr4.1:7573707-7573726 | None:intergenic | 30.0% | |
| CCTAAAATGTTTAACGAGAA+GGG | - | chr4.1:7575064-7575083 | None:intergenic | 30.0% | |
| CTAAAATGTTTAACGAGAAG+GGG | - | chr4.1:7575063-7575082 | None:intergenic | 30.0% | |
| CTTTGTATTTGAAAAGTTCC+TGG | + | chr4.1:7574925-7574944 | MS.gene70153:intron | 30.0% | |
| GACAAAATAACGCTAATGAT+GGG | + | chr4.1:7573942-7573961 | MS.gene70153:CDS | 30.0% | |
| GCAAACAACGAAAAAATTCA+AGG | - | chr4.1:7573671-7573690 | None:intergenic | 30.0% | |
| TAAAATGTTTAACGAGAAGG+GGG | - | chr4.1:7575062-7575081 | None:intergenic | 30.0% | |
| TAAGATAACAAGATAATCCC+TGG | + | chr4.1:7574243-7574262 | MS.gene70153:intron | 30.0% | |
| TAGCTAAACATAAAGCAAGA+GGG | - | chr4.1:7573342-7573361 | None:intergenic | 30.0% | |
| TCAACAAACTTCAGAAGTTT+AGG | - | chr4.1:7577223-7577242 | None:intergenic | 30.0% | |
| TCTTTACAGTTCAGTTTCAT+GGG | + | chr4.1:7576090-7576109 | MS.gene70153:CDS | 30.0% | |
| ! | ACAACTCCTGACAATTTTAT+TGG | - | chr4.1:7576511-7576530 | None:intergenic | 30.0% |
| ! | ACTGTATTTTATGTTTCCGA+GGG | + | chr4.1:7576403-7576422 | MS.gene70153:intron | 30.0% |
| ! | AGATCTTTTTATTGAAGACC+AGG | - | chr4.1:7574264-7574283 | None:intergenic | 30.0% |
| ! | GATCTTTTTATTGAAGACCA+GGG | - | chr4.1:7574263-7574282 | None:intergenic | 30.0% |
| ! | TGAAGAACTGCATCAATTTT+TGG | + | chr4.1:7575984-7576003 | MS.gene70153:CDS | 30.0% |
| ! | TGTTCGCCATTATTCTTTTA+TGG | + | chr4.1:7575731-7575750 | MS.gene70153:intron | 30.0% |
| ! | TTCAGGTTCATTGAGAAATA+TGG | + | chr4.1:7573779-7573798 | MS.gene70153:intron | 30.0% |
| ! | TTCTTTTAAACTCTTGTGCA+AGG | - | chr4.1:7575904-7575923 | None:intergenic | 30.0% |
| ! | TTGTATTGATGAAGACACTT+GGG | + | chr4.1:7576576-7576595 | MS.gene70153:intron | 30.0% |
| !! | ATTAAGCAGAAGAGTGTTTA+TGG | - | chr4.1:7574962-7574981 | None:intergenic | 30.0% |
| !!! | GTTGTTACTTTTCTGAATAC+TGG | + | chr4.1:7574157-7574176 | MS.gene70153:intron | 30.0% |
| AAAAAATTCAAGGCTCTTCC+TGG | - | chr4.1:7573661-7573680 | None:intergenic | 35.0% | |
| AACAAGCATAGGTGACAATA+AGG | - | chr4.1:7574778-7574797 | None:intergenic | 35.0% | |
| AAGTTTATGTGCAAGAGGAA+AGG | + | chr4.1:7575095-7575114 | MS.gene70153:CDS | 35.0% | |
| ACATTTCGTTTCAAAGCCTA+TGG | + | chr4.1:7575318-7575337 | MS.gene70153:intron | 35.0% | |
| ACTGAAACGCAGAATTGAAA+TGG | - | chr4.1:7573118-7573137 | None:intergenic | 35.0% | |
| AGCTAAACATAAAGCAAGAG+GGG | - | chr4.1:7573341-7573360 | None:intergenic | 35.0% | |
| ATGAATCCAAAGGACCTTAA+TGG | + | chr4.1:7574519-7574538 | MS.gene70153:intron | 35.0% | |
| CATAACAGTGGAATTGATGT+CGG | - | chr4.1:7575461-7575480 | None:intergenic | 35.0% | |
| GAAGAGACAGAAAGTTATTG+AGG | + | chr4.1:7577376-7577395 | MS.gene70153:CDS | 35.0% | |
| GACAATAAGGATCATGTAGT+TGG | - | chr4.1:7574765-7574784 | None:intergenic | 35.0% | |
| GATGTGTTTACATAGAGCTT+AGG | - | chr4.1:7576117-7576136 | None:intergenic | 35.0% | |
| GCATCTTTCTGTACTAAGAT+AGG | + | chr4.1:7576329-7576348 | MS.gene70153:intron | 35.0% | |
| GGACAAAATAACGCTAATGA+TGG | + | chr4.1:7573941-7573960 | MS.gene70153:CDS | 35.0% | |
| GTAGGACAGAAAGGAATTTA+TGG | + | chr4.1:7574392-7574411 | MS.gene70153:intron | 35.0% | |
| TAACTTTCTGTCTCTTCATC+CGG | - | chr4.1:7577373-7577392 | None:intergenic | 35.0% | |
| TCAATTCCACTGTTATGCTA+TGG | + | chr4.1:7575464-7575483 | MS.gene70153:intron | 35.0% | |
| TCCTACCATCTACAATGTAA+GGG | - | chr4.1:7574378-7574397 | None:intergenic | 35.0% | |
| TGAATCCAAAGGACCTTAAT+GGG | + | chr4.1:7574520-7574539 | MS.gene70153:intron | 35.0% | |
| TTCCTTCCAAATACAATCGA+AGG | - | chr4.1:7576742-7576761 | None:intergenic | 35.0% | |
| TTGATCCCTTACATTGTAGA+TGG | + | chr4.1:7574370-7574389 | MS.gene70153:intron | 35.0% | |
| TTTATGGTAACAGAAAACCC+AGG | - | chr4.1:7574946-7574965 | None:intergenic | 35.0% | |
| ! | AATTCTGCGTTTCAGTTTTC+AGG | + | chr4.1:7573122-7573141 | MS.gene70153:CDS | 35.0% |
| ! | ATTTTTAATCGCTGCTCACT+AGG | + | chr4.1:7573361-7573380 | MS.gene70153:intron | 35.0% |
| ! | CCCTTCTCGTTAAACATTTT+AGG | + | chr4.1:7575061-7575080 | MS.gene70153:intron | 35.0% |
| ! | CTCTACTTGGTGGAATAAAT+GGG | + | chr4.1:7575213-7575232 | MS.gene70153:CDS | 35.0% |
| ! | GAAAAGGTTTAAAGCTTTCC+CGG | + | chr4.1:7573980-7573999 | MS.gene70153:intron | 35.0% |
| ! | GACTGTATTTTATGTTTCCG+AGG | + | chr4.1:7576402-7576421 | MS.gene70153:intron | 35.0% |
| ! | GAGGAAAGTATAAGTTATGC+TGG | - | chr4.1:7574634-7574653 | None:intergenic | 35.0% |
| ! | GTTGTATTGATGAAGACACT+TGG | + | chr4.1:7576575-7576594 | MS.gene70153:intron | 35.0% |
| ! | TAGAGAAACTCGTGTTTTCT+TGG | + | chr4.1:7575410-7575429 | MS.gene70153:intron | 35.0% |
| ! | TCTCAACTTTTATCAGCACT+CGG | + | chr4.1:7577101-7577120 | MS.gene70153:CDS | 35.0% |
| ! | TCTCTACTTGGTGGAATAAA+TGG | + | chr4.1:7575212-7575231 | MS.gene70153:CDS | 35.0% |
| ! | TTTTCTGTACATCAGAAGGT+TGG | - | chr4.1:7573880-7573899 | None:intergenic | 35.0% |
| ! | TTTTTAATCGCTGCTCACTA+GGG | + | chr4.1:7573362-7573381 | MS.gene70153:intron | 35.0% |
| !! | ACACCGACATAATTTTTCAG+TGG | - | chr4.1:7575511-7575530 | None:intergenic | 35.0% |
| !! | TCACGAAGTATTGTTGACTA+AGG | - | chr4.1:7574124-7574143 | None:intergenic | 35.0% |
| !! | TCGTTAAACATTTTAGGTGC+AGG | + | chr4.1:7575067-7575086 | MS.gene70153:intron | 35.0% |
| !! | TTACTTTTCTGAATACTGGC+AGG | + | chr4.1:7574161-7574180 | MS.gene70153:intron | 35.0% |
| AAAATCTCAGCCACAATGAG+TGG | + | chr4.1:7575132-7575151 | MS.gene70153:CDS | 40.0% | |
| AAACATAAAGCAAGAGGGGA+GGG | - | chr4.1:7573337-7573356 | None:intergenic | 40.0% | |
| AACAAGCTGTTCCTTCATCA+TGG | + | chr4.1:7573258-7573277 | MS.gene70153:CDS | 40.0% | |
| AACAGGCCTTCGATTGTATT+TGG | + | chr4.1:7576733-7576752 | MS.gene70153:CDS | 40.0% | |
| AACTTCTTGTAGGTCGATGT+AGG | + | chr4.1:7576698-7576717 | MS.gene70153:intron | 40.0% | |
| ACAAGATTTGCCTGGTTACT+GGG | + | chr4.1:7577267-7577286 | MS.gene70153:CDS | 40.0% | |
| ACAAGCTGTTCCTTCATCAT+GGG | + | chr4.1:7573259-7573278 | MS.gene70153:CDS | 40.0% | |
| ACATGGCAGACGAATTATTC+AGG | + | chr4.1:7573909-7573928 | MS.gene70153:CDS | 40.0% | |
| ACGAGTTTCTCTAACAAACC+AGG | - | chr4.1:7575403-7575422 | None:intergenic | 40.0% | |
| ACGATGTAAGCAACTAAGCA+CGG | + | chr4.1:7575271-7575290 | MS.gene70153:intron | 40.0% | |
| ACTGACCTCAAACTTCTTGT+AGG | + | chr4.1:7576688-7576707 | MS.gene70153:intron | 40.0% | |
| ATCGACCTACAAGAAGTTTG+AGG | - | chr4.1:7576696-7576715 | None:intergenic | 40.0% | |
| ATGGCAGACGAATTATTCAG+GGG | + | chr4.1:7573911-7573930 | MS.gene70153:CDS | 40.0% | |
| ATTCGCAGACCCTTTATGAA+AGG | + | chr4.1:7573617-7573636 | MS.gene70153:intron | 40.0% | |
| ATTTACCTCTGTTTCACGGT+AGG | - | chr4.1:7574717-7574736 | None:intergenic | 40.0% | |
| CATGGCAGACGAATTATTCA+GGG | + | chr4.1:7573910-7573929 | MS.gene70153:CDS | 40.0% | |
| CCAATTACATCTCTACTTGG+TGG | + | chr4.1:7575203-7575222 | MS.gene70153:CDS | 40.0% | |
| CCACCAAGTAGAGATGTAAT+TGG | - | chr4.1:7575206-7575225 | None:intergenic | 40.0% | |
| CTCTTCATCCGGTAAAATCA+TGG | - | chr4.1:7577362-7577381 | None:intergenic | 40.0% | |
| CTGGTTTATCTGCAGTTAGA+AGG | - | chr4.1:7575960-7575979 | None:intergenic | 40.0% | |
| CTGTAGTTGGGGTGAAAATA+GGG | + | chr4.1:7573810-7573829 | MS.gene70153:CDS | 40.0% | |
| CTTAAACGGTTGTGTGAAGA+CGG | + | chr4.1:7576229-7576248 | MS.gene70153:intron | 40.0% | |
| GACACAACAGAAATGACTAG+AGG | + | chr4.1:7577241-7577260 | MS.gene70153:CDS | 40.0% | |
| GAGCTTCTCTCATATTTGCA+CGG | + | chr4.1:7576898-7576917 | MS.gene70153:CDS | 40.0% | |
| GATGTTCCATAGCATAACAG+TGG | - | chr4.1:7575473-7575492 | None:intergenic | 40.0% | |
| GCTCTATGTAAACACATCAC+CGG | + | chr4.1:7576119-7576138 | MS.gene70153:CDS | 40.0% | |
| GGCAATGCAAAAACAAGCAT+AGG | - | chr4.1:7574789-7574808 | None:intergenic | 40.0% | |
| GTAATGCTGCTCTCTCTATA+TGG | + | chr4.1:7576141-7576160 | MS.gene70153:intron | 40.0% | |
| GTCCTACCATCTACAATGTA+AGG | - | chr4.1:7574379-7574398 | None:intergenic | 40.0% | |
| TAAACATAAAGCAAGAGGGG+AGG | - | chr4.1:7573338-7573357 | None:intergenic | 40.0% | |
| TATAGAGAGAGCAGCATTAC+CGG | - | chr4.1:7576141-7576160 | None:intergenic | 40.0% | |
| TATCTCCCATTAAGGTCCTT+TGG | - | chr4.1:7574528-7574547 | None:intergenic | 40.0% | |
| TCCATTGTCCCTCATAAACT+GGG | - | chr4.1:7574666-7574685 | None:intergenic | 40.0% | |
| TCCCTTACATTGTAGATGGT+AGG | + | chr4.1:7574374-7574393 | MS.gene70153:intron | 40.0% | |
| TGATGCAGTTCTTCAATTGC+TGG | - | chr4.1:7575979-7575998 | None:intergenic | 40.0% | |
| TGCGGTATTAGTGATTCCAT+AGG | - | chr4.1:7575337-7575356 | None:intergenic | 40.0% | |
| TGCTATGTTGTAGAGTGTGA+TGG | - | chr4.1:7573201-7573220 | None:intergenic | 40.0% | |
| TGTAGTTGGGGTGAAAATAG+GGG | + | chr4.1:7573811-7573830 | MS.gene70153:CDS | 40.0% | |
| TTGTAGATGGTAGGACAGAA+AGG | + | chr4.1:7574383-7574402 | MS.gene70153:intron | 40.0% | |
| TTTATGTGCAAGAGGAAAGG+TGG | + | chr4.1:7575098-7575117 | MS.gene70153:CDS | 40.0% | |
| TTTCATAAAGGGTCTGCGAA+TGG | - | chr4.1:7573618-7573637 | None:intergenic | 40.0% | |
| ! | AACACTGATTGACATCGGTA+GGG | - | chr4.1:7573589-7573608 | None:intergenic | 40.0% |
| ! | ACCAGAACACTGATTGACAT+CGG | - | chr4.1:7573594-7573613 | None:intergenic | 40.0% |
| ! | CAGGTTGAGACAAAACAGTT+TGG | - | chr4.1:7575160-7575179 | None:intergenic | 40.0% |
| ! | TGTTGTGGCTGTAGTTTTCT+AGG | + | chr4.1:7575821-7575840 | MS.gene70153:intron | 40.0% |
| ! | TTATGCTGGCTGTTAGCATA+GGG | - | chr4.1:7574620-7574639 | None:intergenic | 40.0% |
| ! | TTGTTGCGTTTTCCCTAGTA+AGG | - | chr4.1:7575023-7575042 | None:intergenic | 40.0% |
| ! | TTTATCAGCACTCGGTTTTC+AGG | + | chr4.1:7577109-7577128 | MS.gene70153:CDS | 40.0% |
| ! | TTTATGAGGGACAATGGACT+AGG | + | chr4.1:7574668-7574687 | MS.gene70153:CDS | 40.0% |
| !! | CGTTTCAGTTTTCAGGAGTT+TGG | + | chr4.1:7573129-7573148 | MS.gene70153:CDS | 40.0% |
| !!! | TGAAAGAGCGCTCGTTTTAT+AGG | - | chr4.1:7574059-7574078 | None:intergenic | 40.0% |
| !!! | TTTTGGAGTTTCAGCTTCCA+AGG | + | chr4.1:7576001-7576020 | MS.gene70153:CDS | 40.0% |
| AAACTACCCAAAGGAGTGGA+GGG | - | chr4.1:7575660-7575679 | None:intergenic | 45.0% | |
| AACATAAAGCAAGAGGGGAG+GGG | - | chr4.1:7573336-7573355 | None:intergenic | 45.0% | |
| AACTCTGCTTTATACCCTGG+AGG | + | chr4.1:7577175-7577194 | MS.gene70153:CDS | 45.0% | |
| ACAACAGCGTTGTCATCGTA+GGG | - | chr4.1:7576935-7576954 | None:intergenic | 45.0% | |
| ACCAAGAGTCTTGCTTTCGA+TGG | + | chr4.1:7573170-7573189 | MS.gene70153:CDS | 45.0% | |
| ACCACTGTCAAACTACCCAA+AGG | - | chr4.1:7575669-7575688 | None:intergenic | 45.0% | |
| ACCGATGTCAATCAGTGTTC+TGG | + | chr4.1:7573590-7573609 | MS.gene70153:intron | 45.0% | |
| ACTCTGCTTTATACCCTGGA+GGG | + | chr4.1:7577176-7577195 | MS.gene70153:CDS | 45.0% | |
| ACTTCTTCCTATCAGGACCA+AGG | - | chr4.1:7576056-7576075 | None:intergenic | 45.0% | |
| AGGATTGAGCTTGAATGTCC+AGG | - | chr4.1:7574697-7574716 | None:intergenic | 45.0% | |
| AGTTTCAGCTTCCAAGGCAA+TGG | + | chr4.1:7576007-7576026 | MS.gene70153:CDS | 45.0% | |
| ATAAACTGGGGGGAAAAGAG+AGG | - | chr4.1:7574653-7574672 | None:intergenic | 45.0% | |
| ATGGAACCCATGCTGTAGTT+GGG | + | chr4.1:7573798-7573817 | MS.gene70153:CDS | 45.0% | |
| ATTGTCCCTCATAAACTGGG+GGG | - | chr4.1:7574663-7574682 | None:intergenic | 45.0% | |
| CACAAGATTTGCCTGGTTAC+TGG | + | chr4.1:7577266-7577285 | MS.gene70153:CDS | 45.0% | |
| CAGTAACCAGGCAAATCTTG+TGG | - | chr4.1:7577268-7577287 | None:intergenic | 45.0% | |
| CAGTTGGAATGTCTTAGGGA+GGG | - | chr4.1:7576807-7576826 | None:intergenic | 45.0% | |
| CATTGTCCCTCATAAACTGG+GGG | - | chr4.1:7574664-7574683 | None:intergenic | 45.0% | |
| CCATTGTCCCTCATAAACTG+GGG | - | chr4.1:7574665-7574684 | None:intergenic | 45.0% | |
| CCTGCAGTTGGAATGTCTTA+GGG | - | chr4.1:7576811-7576830 | None:intergenic | 45.0% | |
| CTGTCTGGTAAGATTCCAAC+AGG | + | chr4.1:7573092-7573111 | MS.gene70153:CDS | 45.0% | |
| CTTCTTCCTATCAGGACCAA+GGG | - | chr4.1:7576055-7576074 | None:intergenic | 45.0% | |
| CTTGGTGGAATAAATGGGAG+TGG | + | chr4.1:7575218-7575237 | MS.gene70153:CDS | 45.0% | |
| GAATACTGGCAGGTGAACTA+TGG | + | chr4.1:7574171-7574190 | MS.gene70153:intron | 45.0% | |
| GAGTTCACATTTACGTCCGA+TGG | - | chr4.1:7577160-7577179 | None:intergenic | 45.0% | |
| GCAAGAGGAAAGGTGGAAAT+GGG | + | chr4.1:7575105-7575124 | MS.gene70153:CDS | 45.0% | |
| GCAGAATTGAAATGGCCTGT+TGG | - | chr4.1:7573110-7573129 | None:intergenic | 45.0% | |
| GCTGTAGTTGGGGTGAAAAT+AGG | + | chr4.1:7573809-7573828 | MS.gene70153:CDS | 45.0% | |
| GGAGTGAGGCCTTTCATAAA+GGG | - | chr4.1:7573629-7573648 | None:intergenic | 45.0% | |
| GGCCTTCGATTGTATTTGGA+AGG | + | chr4.1:7576737-7576756 | MS.gene70153:CDS | 45.0% | |
| GTAGGAATGAAGCCTGTAAC+AGG | + | chr4.1:7576716-7576735 | MS.gene70153:CDS | 45.0% | |
| GTAGTTGGGGTGAAAATAGG+GGG | + | chr4.1:7573812-7573831 | MS.gene70153:CDS | 45.0% | |
| GTCCATTGTCCCTCATAAAC+TGG | - | chr4.1:7574667-7574686 | None:intergenic | 45.0% | |
| GTGAACTCTGCTTTATACCC+TGG | + | chr4.1:7577172-7577191 | MS.gene70153:CDS | 45.0% | |
| GTTTCAGCTTCCAAGGCAAT+GGG | + | chr4.1:7576008-7576027 | MS.gene70153:CDS | 45.0% | |
| TACAATCGAAGGCCTGTTAC+AGG | - | chr4.1:7576731-7576750 | None:intergenic | 45.0% | |
| TATGAGAGAAGCTCTTCCAC+TGG | - | chr4.1:7576892-7576911 | None:intergenic | 45.0% | |
| TATGGAACCCATGCTGTAGT+TGG | + | chr4.1:7573797-7573816 | MS.gene70153:CDS | 45.0% | |
| TCAATCCTACCGTGAAACAG+AGG | + | chr4.1:7574709-7574728 | MS.gene70153:CDS | 45.0% | |
| TCCTGCAGTTGGAATGTCTT+AGG | - | chr4.1:7576812-7576831 | None:intergenic | 45.0% | |
| TCCTTTGGGTAGTTTGACAG+TGG | + | chr4.1:7575665-7575684 | MS.gene70153:intron | 45.0% | |
| TGCAAGAGGAAAGGTGGAAA+TGG | + | chr4.1:7575104-7575123 | MS.gene70153:CDS | 45.0% | |
| TGCTAGATACACTGTTCTCC+TGG | + | chr4.1:7575382-7575401 | MS.gene70153:intron | 45.0% | |
| TGTACATCAGAAGGTTGGAG+AGG | - | chr4.1:7573875-7573894 | None:intergenic | 45.0% | |
| TGTCAAACTACCCAAAGGAG+TGG | - | chr4.1:7575664-7575683 | None:intergenic | 45.0% | |
| TTGGGTAGTTTGACAGTGGT+GGG | + | chr4.1:7575669-7575688 | MS.gene70153:intron | 45.0% | |
| TTGTCATCGTAGGGTTCAAC+AGG | - | chr4.1:7576926-7576945 | None:intergenic | 45.0% | |
| TTTCACCCCAACTACAGCAT+GGG | - | chr4.1:7573807-7573826 | None:intergenic | 45.0% | |
| TTTGGGTAGTTTGACAGTGG+TGG | + | chr4.1:7575668-7575687 | MS.gene70153:intron | 45.0% | |
| ! | CTTTTCCCCCCAGTTTATGA+GGG | + | chr4.1:7574655-7574674 | MS.gene70153:intron | 45.0% |
| ! | GAACACTGATTGACATCGGT+AGG | - | chr4.1:7573590-7573609 | None:intergenic | 45.0% |
| ! | GCAAGGCTTTATGTCGAGAA+GGG | + | chr4.1:7577301-7577320 | MS.gene70153:CDS | 45.0% |
| ! | GTTATGCTGGCTGTTAGCAT+AGG | - | chr4.1:7574621-7574640 | None:intergenic | 45.0% |
| ! | GTTTGACAGTGGTGGGAAAA+TGG | + | chr4.1:7575676-7575695 | MS.gene70153:intron | 45.0% |
| ! | TCTTTTCCCCCCAGTTTATG+AGG | + | chr4.1:7574654-7574673 | MS.gene70153:intron | 45.0% |
| ! | TTTTCACCCCAACTACAGCA+TGG | - | chr4.1:7573808-7573827 | None:intergenic | 45.0% |
| !! | ACTGGTGCTCACTTTGAAGT+GGG | + | chr4.1:7576956-7576975 | MS.gene70153:CDS | 45.0% |
| !! | AGATTTTGGTCGTCAACGCT+CGG | - | chr4.1:7576474-7576493 | None:intergenic | 45.0% |
| !! | CACTTTGAAGTGGGAGAAAC+TGG | + | chr4.1:7576965-7576984 | MS.gene70153:CDS | 45.0% |
| !! | TAGCGTTATTTTGTCCAGCC+TGG | - | chr4.1:7573937-7573956 | None:intergenic | 45.0% |
| !!! | TCATTTAATTTTTTAAAATT+GGG | + | chr4.1:7574433-7574452 | MS.gene70153:intron | 5.0% |
| !!! | TTCATTTAATTTTTTAAAAT+TGG | + | chr4.1:7574432-7574451 | MS.gene70153:intron | 5.0% |
| AACTACCCAAAGGAGTGGAG+GGG | - | chr4.1:7575659-7575678 | None:intergenic | 50.0% | |
| ACATTTACGTCCGATGGCTG+TGG | - | chr4.1:7577154-7577173 | None:intergenic | 50.0% | |
| AGAAGTTTAGGTGCCTGAGC+AGG | - | chr4.1:7577211-7577230 | None:intergenic | 50.0% | |
| AGACGAATTATTCAGGGGCC+AGG | + | chr4.1:7573916-7573935 | MS.gene70153:CDS | 50.0% | |
| AGAGGACCACAAGATTTGCC+TGG | + | chr4.1:7577259-7577278 | MS.gene70153:CDS | 50.0% | |
| AGGCTCTTCCTGGTTAAGAG+CGG | - | chr4.1:7573651-7573670 | None:intergenic | 50.0% | |
| AGGGCAAGCTCACCAAATAC+AGG | - | chr4.1:7576036-7576055 | None:intergenic | 50.0% | |
| ATGTCTTAGGGAGGGAGGAT+AGG | - | chr4.1:7576799-7576818 | None:intergenic | 50.0% | |
| CAAACTACCCAAAGGAGTGG+AGG | - | chr4.1:7575661-7575680 | None:intergenic | 50.0% | |
| CACAACAGCGTTGTCATCGT+AGG | - | chr4.1:7576936-7576955 | None:intergenic | 50.0% | |
| CAGTTTGGCACCACTCATTG+TGG | - | chr4.1:7575145-7575164 | None:intergenic | 50.0% | |
| CCAGATTTCTGAGTCAAGCC+AGG | - | chr4.1:7577076-7577095 | None:intergenic | 50.0% | |
| CCCCAGTTTATGAGGGACAA+TGG | + | chr4.1:7574662-7574681 | MS.gene70153:intron | 50.0% | |
| CCCTAAGACATTCCAACTGC+AGG | + | chr4.1:7576808-7576827 | MS.gene70153:CDS | 50.0% | |
| CTCTGCGACTTCTTCCTATC+AGG | - | chr4.1:7576063-7576082 | None:intergenic | 50.0% | |
| CTTGTGTGACAGAGCATGCT+AGG | - | chr4.1:7576279-7576298 | None:intergenic | 50.0% | |
| GATGACAACGCTGTTGTGAC+TGG | + | chr4.1:7576938-7576957 | MS.gene70153:CDS | 50.0% | |
| GCAGTTGGAATGTCTTAGGG+AGG | - | chr4.1:7576808-7576827 | None:intergenic | 50.0% | |
| GCCATCGAAAGCAAGACTCT+TGG | - | chr4.1:7573174-7573193 | None:intergenic | 50.0% | |
| GGCAAGCTCACCAAATACAG+GGG | - | chr4.1:7576034-7576053 | None:intergenic | 50.0% | |
| GGGAGTGAGGCCTTTCATAA+AGG | - | chr4.1:7573630-7573649 | None:intergenic | 50.0% | |
| GGGCAAGCTCACCAAATACA+GGG | - | chr4.1:7576035-7576054 | None:intergenic | 50.0% | |
| TGGAACCCATGCTGTAGTTG+GGG | + | chr4.1:7573799-7573818 | MS.gene70153:CDS | 50.0% | |
| TTGGAATGTCTTAGGGAGGG+AGG | - | chr4.1:7576804-7576823 | None:intergenic | 50.0% | |
| ! | AAAGTACCTTGCCAGTGCAG+CGG | - | chr4.1:7573288-7573307 | None:intergenic | 50.0% |
| ! | CCTGGCTTGACTCAGAAATC+TGG | + | chr4.1:7577073-7577092 | MS.gene70153:CDS | 50.0% |
| ! | GACTGGTGCTCACTTTGAAG+TGG | + | chr4.1:7576955-7576974 | MS.gene70153:CDS | 50.0% |
| ! | GGCAAGGCTTTATGTCGAGA+AGG | + | chr4.1:7577300-7577319 | MS.gene70153:CDS | 50.0% |
| ! | GGGAGAAACTGGTCTGAAGA+AGG | + | chr4.1:7576976-7576995 | MS.gene70153:CDS | 50.0% |
| ! | GGGAGGATAGGTGCTGTAAA+TGG | - | chr4.1:7576787-7576806 | None:intergenic | 50.0% |
| ! | GTATTTGGTGAGCTTGCCCT+TGG | + | chr4.1:7576036-7576055 | MS.gene70153:CDS | 50.0% |
| ! | GTGGTGGGAAAATGGAAACG+AGG | + | chr4.1:7575684-7575703 | MS.gene70153:intron | 50.0% |
| !! | ATTTTGGTCGTCAACGCTCG+GGG | - | chr4.1:7576472-7576491 | None:intergenic | 50.0% |
| !! | GATTAGTCTCGTCCTGCAGT+TGG | - | chr4.1:7576823-7576842 | None:intergenic | 50.0% |
| !! | GATTTTGGTCGTCAACGCTC+GGG | - | chr4.1:7576473-7576492 | None:intergenic | 50.0% |
| !! | GGACAATGGACTAGGATTCC+TGG | + | chr4.1:7574676-7574695 | MS.gene70153:CDS | 50.0% |
| AAGTACCTTGCCAGTGCAGC+GGG | - | chr4.1:7573287-7573306 | None:intergenic | 55.0% | |
| AATACAGGGGCCCATTGCCT+TGG | - | chr4.1:7576021-7576040 | None:intergenic | 55.0% | |
| AGCTTGCCCTTGGTCCTGAT+AGG | + | chr4.1:7576046-7576065 | MS.gene70153:CDS | 55.0% | |
| AGGCAATGGGCCCCTGTATT+TGG | + | chr4.1:7576021-7576040 | MS.gene70153:CDS | 55.0% | |
| ATAAAGCAAGAGGGGAGGGG+AGG | - | chr4.1:7573333-7573352 | None:intergenic | 55.0% | |
| CAAGGGTGAAACGAAGCCCT+CGG | - | chr4.1:7576422-7576441 | None:intergenic | 55.0% | |
| CCTGGTTACTGGGTTGTGTC+GGG | + | chr4.1:7577277-7577296 | MS.gene70153:CDS | 55.0% | |
| CGTCAACGCTCGGGGTTATT+GGG | - | chr4.1:7576464-7576483 | None:intergenic | 55.0% | |
| CTGGTTACTGGGTTGTGTCG+GGG | + | chr4.1:7577278-7577297 | MS.gene70153:CDS | 55.0% | |
| CTTCACCCCTCCACTCCTTT+GGG | + | chr4.1:7575651-7575670 | MS.gene70153:intron | 55.0% | |
| GAATTATTCAGGGGCCAGGC+TGG | + | chr4.1:7573920-7573939 | MS.gene70153:CDS | 55.0% | |
| GCCTGGTTACTGGGTTGTGT+CGG | + | chr4.1:7577276-7577295 | MS.gene70153:CDS | 55.0% | |
| GGCTCTTCCTGGTTAAGAGC+GGG | - | chr4.1:7573650-7573669 | None:intergenic | 55.0% | |
| GTCAGAGCAGTTCAACCAGG+AGG | + | chr4.1:7573064-7573083 | MS.gene70153:CDS | 55.0% | |
| TACCAGACAGTGACACCTCC+TGG | - | chr4.1:7573082-7573101 | None:intergenic | 55.0% | |
| TCGTCAACGCTCGGGGTTAT+TGG | - | chr4.1:7576465-7576484 | None:intergenic | 55.0% | |
| TGGTTACTGGGTTGTGTCGG+GGG | + | chr4.1:7577279-7577298 | MS.gene70153:CDS | 55.0% | |
| TTTACGTCCGATGGCTGTGG+TGG | - | chr4.1:7577151-7577170 | None:intergenic | 55.0% | |
| !! | AACCAGGAGGTGTCACTGTC+TGG | + | chr4.1:7573077-7573096 | MS.gene70153:CDS | 55.0% |
| ATCATGGGATCCCGCTGCAC+TGG | + | chr4.1:7573274-7573293 | MS.gene70153:CDS | 60.0% | |
| CCCGACACAACCCAGTAACC+AGG | - | chr4.1:7577280-7577299 | None:intergenic | 60.0% | |
| CCTCACTCCCGCTCTTAACC+AGG | + | chr4.1:7573640-7573659 | MS.gene70153:intron | 60.0% | |
| CCTGGTTAAGAGCGGGAGTG+AGG | - | chr4.1:7573643-7573662 | None:intergenic | 60.0% | |
| GCAGCGGGATCCCATGATGA+AGG | - | chr4.1:7573272-7573291 | None:intergenic | 60.0% | |
| GCTTCACCCCTCCACTCCTT+TGG | + | chr4.1:7575650-7575669 | MS.gene70153:intron | 60.0% | |
| TTAGGTGCCTGAGCAGGCAC+AGG | - | chr4.1:7577205-7577224 | None:intergenic | 60.0% | |
| !!! | TGTGGTGGCGGCAGCTTTTG+TGG | - | chr4.1:7577136-7577155 | None:intergenic | 60.0% |
| ACGTCCGATGGCTGTGGTGG+CGG | - | chr4.1:7577148-7577167 | None:intergenic | 65.0% | |
| ACTGGGTTGTGTCGGGGGCA+AGG | + | chr4.1:7577284-7577303 | MS.gene70153:CDS | 65.0% | |
| ! | TGCATCCCGTGTGAGAGCGC+CGG | + | chr4.1:7577036-7577055 | MS.gene70153:CDS | 65.0% |
| AGGGCCTCCTGTGCCTGCTC+AGG | + | chr4.1:7577195-7577214 | MS.gene70153:CDS | 70.0% | |
| CAGGCACAGGAGGCCCTCCA+GGG | - | chr4.1:7577192-7577211 | None:intergenic | 70.0% | |
| GCTGCCGCCACCACAGCCAT+CGG | + | chr4.1:7577141-7577160 | MS.gene70153:CDS | 70.0% | |
| GGTGCCTGAGCAGGCACAGG+AGG | - | chr4.1:7577202-7577221 | None:intergenic | 70.0% | |
| ! | GGGATCCCGCTGCACTGGCA+AGG | + | chr4.1:7573279-7573298 | MS.gene70153:CDS | 70.0% |
| GCAGGCACAGGAGGCCCTCC+AGG | - | chr4.1:7577193-7577212 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 7573062 | 7577396 | 7573062 | ID=MS.gene70153 |
| chr4.1 | mRNA | 7573062 | 7577396 | 7573062 | ID=MS.gene70153.t1;Parent=MS.gene70153 |
| chr4.1 | exon | 7573062 | 7573300 | 7573062 | ID=MS.gene70153.t1.exon1;Parent=MS.gene70153.t1 |
| chr4.1 | CDS | 7573062 | 7573300 | 7573062 | ID=cds.MS.gene70153.t1;Parent=MS.gene70153.t1 |
| chr4.1 | exon | 7573784 | 7573985 | 7573784 | ID=MS.gene70153.t1.exon2;Parent=MS.gene70153.t1 |
| chr4.1 | CDS | 7573784 | 7573985 | 7573784 | ID=cds.MS.gene70153.t1;Parent=MS.gene70153.t1 |
| chr4.1 | exon | 7574668 | 7574730 | 7574668 | ID=MS.gene70153.t1.exon3;Parent=MS.gene70153.t1 |
| chr4.1 | CDS | 7574668 | 7574730 | 7574668 | ID=cds.MS.gene70153.t1;Parent=MS.gene70153.t1 |
| chr4.1 | exon | 7575083 | 7575275 | 7575083 | ID=MS.gene70153.t1.exon4;Parent=MS.gene70153.t1 |
| chr4.1 | CDS | 7575083 | 7575275 | 7575083 | ID=cds.MS.gene70153.t1;Parent=MS.gene70153.t1 |
| chr4.1 | exon | 7575971 | 7576140 | 7575971 | ID=MS.gene70153.t1.exon5;Parent=MS.gene70153.t1 |
| chr4.1 | CDS | 7575971 | 7576140 | 7575971 | ID=cds.MS.gene70153.t1;Parent=MS.gene70153.t1 |
| chr4.1 | exon | 7576710 | 7577396 | 7576710 | ID=MS.gene70153.t1.exon6;Parent=MS.gene70153.t1 |
| chr4.1 | CDS | 7576710 | 7577396 | 7576710 | ID=cds.MS.gene70153.t1;Parent=MS.gene70153.t1 |
| Gene Sequence |
| Protein sequence |
