Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70355.t1 | XP_003630054.2 | 97.2 | 432 | 12 | 0 | 1 | 432 | 44 | 475 | 4.60E-232 | 813.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70355.t1 | E9L7A5 | 85.2 | 419 | 62 | 0 | 8 | 426 | 55 | 473 | 2.1e-201 | 703.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70355.t1 | G7LAD1 | 97.2 | 432 | 12 | 0 | 1 | 432 | 44 | 475 | 3.3e-232 | 813.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene70355 | -0.824373 | 8.36E-54 | -1.69E-46 |
| MS.gene056899 | MS.gene70355 | 0.813676 | 2.27E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70355 | MS.gene031869 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70355.t1 | MTR_8g091280 | 97.222 | 432 | 12 | 0 | 1 | 432 | 44 | 475 | 0.0 | 861 |
| MS.gene70355.t1 | MTR_7g106830 | 86.574 | 432 | 55 | 1 | 4 | 432 | 42 | 473 | 0.0 | 766 |
| MS.gene70355.t1 | MTR_1807s0010 | 39.394 | 396 | 236 | 2 | 32 | 426 | 7 | 399 | 1.02e-88 | 275 |
| MS.gene70355.t1 | MTR_3g072670 | 31.026 | 390 | 245 | 10 | 40 | 423 | 72 | 443 | 5.40e-51 | 178 |
| MS.gene70355.t1 | MTR_3g072680 | 30.645 | 372 | 236 | 9 | 59 | 424 | 46 | 401 | 2.66e-49 | 172 |
| MS.gene70355.t1 | MTR_1g087760 | 31.593 | 383 | 226 | 11 | 59 | 423 | 30 | 394 | 1.98e-42 | 154 |
| MS.gene70355.t1 | MTR_4g011820 | 29.661 | 354 | 220 | 10 | 87 | 432 | 62 | 394 | 1.23e-40 | 149 |
| MS.gene70355.t1 | MTR_3g072690 | 29.499 | 339 | 183 | 10 | 59 | 395 | 11 | 295 | 2.33e-36 | 135 |
| MS.gene70355.t1 | MTR_8g061360 | 24.607 | 382 | 253 | 11 | 58 | 420 | 42 | 407 | 2.66e-23 | 101 |
| MS.gene70355.t1 | MTR_2g090615 | 23.377 | 385 | 255 | 14 | 56 | 420 | 46 | 410 | 1.21e-17 | 85.1 |
| MS.gene70355.t1 | MTR_8g101750 | 23.174 | 397 | 270 | 13 | 54 | 427 | 46 | 430 | 2.39e-17 | 84.0 |
| MS.gene70355.t1 | MTR_2g008430 | 24.615 | 325 | 207 | 12 | 58 | 357 | 72 | 383 | 1.32e-16 | 82.0 |
| MS.gene70355.t1 | MTR_8g098930 | 22.691 | 379 | 255 | 16 | 78 | 432 | 80 | 444 | 1.49e-15 | 79.0 |
| MS.gene70355.t1 | MTR_6g463260 | 22.427 | 379 | 260 | 13 | 72 | 429 | 166 | 531 | 6.28e-15 | 77.0 |
| MS.gene70355.t1 | MTR_8g101820 | 22.959 | 392 | 264 | 15 | 54 | 427 | 46 | 417 | 1.22e-12 | 69.7 |
| MS.gene70355.t1 | MTR_4g092620 | 23.385 | 325 | 211 | 10 | 58 | 357 | 91 | 402 | 2.45e-12 | 68.9 |
| MS.gene70355.t1 | MTR_7g079080 | 23.684 | 342 | 232 | 12 | 72 | 396 | 73 | 402 | 8.95e-12 | 67.0 |
| MS.gene70355.t1 | MTR_4g097540 | 20.557 | 287 | 201 | 6 | 110 | 371 | 105 | 389 | 2.24e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70355.t1 | AT2G22250 | 79.104 | 402 | 84 | 0 | 25 | 426 | 68 | 469 | 0.0 | 671 |
| MS.gene70355.t1 | AT2G22250 | 79.104 | 402 | 84 | 0 | 25 | 426 | 68 | 469 | 0.0 | 671 |
| MS.gene70355.t1 | AT2G22250 | 79.104 | 402 | 84 | 0 | 25 | 426 | 21 | 422 | 0.0 | 671 |
| MS.gene70355.t1 | AT1G77670 | 31.026 | 390 | 245 | 10 | 40 | 423 | 65 | 436 | 6.43e-55 | 189 |
| MS.gene70355.t1 | AT1G80360 | 28.612 | 353 | 224 | 9 | 87 | 432 | 62 | 393 | 2.44e-37 | 140 |
| MS.gene70355.t1 | AT1G80360 | 28.612 | 353 | 224 | 9 | 87 | 432 | 62 | 393 | 2.44e-37 | 140 |
| MS.gene70355.t1 | AT1G80360 | 28.612 | 353 | 224 | 9 | 87 | 432 | 62 | 393 | 2.44e-37 | 140 |
| MS.gene70355.t1 | AT1G80360 | 28.612 | 353 | 224 | 9 | 87 | 432 | 62 | 393 | 2.44e-37 | 140 |
| MS.gene70355.t1 | AT4G28420 | 23.896 | 385 | 252 | 12 | 57 | 419 | 61 | 426 | 2.10e-23 | 102 |
| MS.gene70355.t1 | AT5G36160 | 21.535 | 404 | 289 | 10 | 36 | 421 | 17 | 410 | 1.06e-22 | 100 |
| MS.gene70355.t1 | AT2G24850 | 24.198 | 405 | 263 | 14 | 40 | 420 | 33 | 417 | 1.30e-22 | 100 |
| MS.gene70355.t1 | AT2G20610 | 24.021 | 383 | 262 | 10 | 58 | 424 | 68 | 437 | 8.29e-22 | 97.8 |
| MS.gene70355.t1 | AT5G53970 | 22.310 | 381 | 273 | 9 | 53 | 420 | 30 | 400 | 8.60e-20 | 91.3 |
| MS.gene70355.t1 | AT4G28420 | 23.988 | 321 | 209 | 11 | 57 | 355 | 61 | 368 | 1.91e-19 | 90.1 |
| MS.gene70355.t1 | AT2G20610 | 23.647 | 351 | 239 | 10 | 58 | 392 | 68 | 405 | 1.22e-17 | 85.1 |
| MS.gene70355.t1 | AT4G28410 | 22.500 | 400 | 261 | 13 | 58 | 431 | 70 | 446 | 4.50e-17 | 83.6 |
| MS.gene70355.t1 | AT4G23600 | 22.067 | 358 | 225 | 13 | 89 | 420 | 73 | 402 | 9.25e-16 | 79.3 |
| MS.gene70355.t1 | AT4G28410 | 25.287 | 261 | 175 | 8 | 58 | 303 | 70 | 325 | 5.99e-15 | 76.6 |
| MS.gene70355.t1 | AT2G13810 | 25.000 | 344 | 209 | 13 | 84 | 404 | 103 | 420 | 9.53e-15 | 76.3 |
| MS.gene70355.t1 | AT3G61510 | 22.384 | 344 | 239 | 12 | 94 | 420 | 94 | 426 | 4.01e-14 | 74.7 |
| MS.gene70355.t1 | AT1G01480 | 25.688 | 218 | 139 | 6 | 94 | 292 | 95 | 308 | 5.25e-14 | 74.3 |
| MS.gene70355.t1 | AT1G62960 | 23.565 | 331 | 218 | 12 | 85 | 394 | 202 | 518 | 5.75e-14 | 74.3 |
| MS.gene70355.t1 | AT4G23600 | 21.683 | 309 | 222 | 10 | 121 | 420 | 1 | 298 | 2.16e-13 | 71.2 |
| MS.gene70355.t1 | AT4G26200 | 24.186 | 215 | 147 | 5 | 94 | 293 | 102 | 315 | 4.80e-13 | 71.2 |
| MS.gene70355.t1 | AT4G23600 | 21.118 | 322 | 216 | 12 | 89 | 392 | 73 | 374 | 3.49e-11 | 65.1 |
Find 115 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGCCAACCTTGCCATTTC+TGG | 0.079416 | 4.2:-10542849 | None:intergenic |
| ATGCAGCAACTCCTGCTTTC+TGG | 0.151985 | 4.2:-10543710 | None:intergenic |
| GCAATTTGTCATAAGCTTAA+AGG | 0.163237 | 4.2:+10541852 | MS.gene70355:CDS |
| TCATTATTCCAGCTCCATTT+TGG | 0.216900 | 4.2:+10542817 | MS.gene70355:CDS |
| CAAGAAGTTTGGGATTTAAA+AGG | 0.233222 | 4.2:-10542914 | None:intergenic |
| AATTCTAATGTTCCAGCATT+AGG | 0.242169 | 4.2:-10541822 | None:intergenic |
| ATTCTAATGTTCCAGCATTA+GGG | 0.292089 | 4.2:-10541821 | None:intergenic |
| TATTGAATTTAGTTCACTTC+AGG | 0.297595 | 4.2:+10543672 | MS.gene70355:intron |
| GCAAAGCTTGTATGCGTTGC+GGG | 0.302503 | 4.2:-10543199 | None:intergenic |
| TCTGGGTAACTGACCCAAAA+TGG | 0.303684 | 4.2:-10542831 | None:intergenic |
| CTTGTTCCAGGGAGTGCATT+TGG | 0.321486 | 4.2:+10544172 | MS.gene70355:CDS |
| CTACAGGTAGCACTTGTTCC+AGG | 0.326666 | 4.2:+10544160 | MS.gene70355:intron |
| GATCAGATTGTTGTTACTAA+TGG | 0.334270 | 4.2:+10541994 | MS.gene70355:CDS |
| CTCAAAATCCGATTCTGAAT+TGG | 0.336223 | 4.2:+10541453 | MS.gene70355:CDS |
| GGAAAAGAAGCTGAGGGATT+TGG | 0.338146 | 4.2:+10544004 | MS.gene70355:CDS |
| AGCAAAGCACCCCAGGCTTC+TGG | 0.348641 | 4.2:+10543043 | MS.gene70355:CDS |
| TATTCTCTACAGCTGCTTGT+AGG | 0.360055 | 4.2:-10544240 | None:intergenic |
| TGGCGGCTTGGATATATTGC+TGG | 0.367266 | 4.2:+10543485 | MS.gene70355:CDS |
| ACAGATCCTGTCGGGTTAGA+TGG | 0.370302 | 4.2:-10542981 | None:intergenic |
| TGCAGCAACTCCTGCTTTCT+GGG | 0.375768 | 4.2:-10543709 | None:intergenic |
| CCGGCAGCCAAGCGAATAAC+AGG | 0.376297 | 4.2:-10541574 | None:intergenic |
| TGTCGATATCTGTTGGATAA+AGG | 0.377700 | 4.2:+10544052 | MS.gene70355:CDS |
| CGGCCAACCTTGCCATTTCT+GGG | 0.386197 | 4.2:-10542848 | None:intergenic |
| ATTGATTTCAGCTCCTATTA+CGG | 0.395214 | 4.2:+10543983 | MS.gene70355:CDS |
| GGGATTTAAAAGGAAATTGT+TGG | 0.397371 | 4.2:-10542904 | None:intergenic |
| CTGCTGTAATAAAATGCTTC+GGG | 0.411183 | 4.2:-10543508 | None:intergenic |
| TTGGGTCAGTTACCCAGAAA+TGG | 0.412108 | 4.2:+10542836 | MS.gene70355:CDS |
| CCTGTTATTCGCTTGGCTGC+CGG | 0.414314 | 4.2:+10541574 | MS.gene70355:CDS |
| AAAGCAGGAGTTGCTGCATT+AGG | 0.419874 | 4.2:+10543714 | MS.gene70355:CDS |
| ATTGAATTTAGTTCACTTCA+GGG | 0.420218 | 4.2:+10543673 | MS.gene70355:intron |
| TGGCGTTCCTGTTATTCGCT+TGG | 0.434147 | 4.2:+10541567 | MS.gene70355:CDS |
| ATGCTGGAACATTAGAATTA+CGG | 0.438442 | 4.2:+10541826 | MS.gene70355:CDS |
| ACTGCTGTAATAAAATGCTT+CGG | 0.441560 | 4.2:-10543509 | None:intergenic |
| GCAATGACGGGTTGGCGGCT+TGG | 0.443014 | 4.2:+10543473 | MS.gene70355:CDS |
| ACCGCGGGTGTATCAAAATC+AGG | 0.445970 | 4.2:-10541601 | None:intergenic |
| ATCAACTTCCAATTCAGAAT+CGG | 0.450108 | 4.2:-10541461 | None:intergenic |
| CCTTTGCAATGACGGGTTGG+CGG | 0.450458 | 4.2:+10543468 | MS.gene70355:CDS |
| ATTCTCTACAGCTGCTTGTA+GGG | 0.452436 | 4.2:-10544239 | None:intergenic |
| CCGCAGGCCTTTGCAATGAC+GGG | 0.465375 | 4.2:+10543461 | MS.gene70355:intron |
| TAGAGAACGAAGGGATTACT+TGG | 0.471008 | 4.2:+10543785 | MS.gene70355:CDS |
| GTGATTGCAGTTTGCTCACC+GGG | 0.475286 | 4.2:+10542042 | MS.gene70355:CDS |
| CGAATCAACATACCTGACTT+TGG | 0.475879 | 4.2:-10543541 | None:intergenic |
| ACCGCAGGCCTTTGCAATGA+CGG | 0.477256 | 4.2:+10543460 | MS.gene70355:intron |
| TTAGTAACAACAATCTGATC+AGG | 0.481417 | 4.2:-10541991 | None:intergenic |
| AGCTGCTTGTAGGGTGGGAA+GGG | 0.483431 | 4.2:-10544230 | None:intergenic |
| AACAGAACTCTAACTGTGAA+TGG | 0.487843 | 4.2:+10543241 | MS.gene70355:CDS |
| TAGGATACACAGATCCTGTC+GGG | 0.490141 | 4.2:-10542989 | None:intergenic |
| GTCTCTCTGTCGATATCTGT+TGG | 0.490859 | 4.2:+10544045 | MS.gene70355:CDS |
| GTAATAGCGACAGTTCTTGA+AGG | 0.496768 | 4.2:-10541517 | None:intergenic |
| GCCACTGCTCTTGTTCAAGC+TGG | 0.498280 | 4.2:+10541547 | MS.gene70355:CDS |
| CAGCTGCTTGTAGGGTGGGA+AGG | 0.499588 | 4.2:-10544231 | None:intergenic |
| CGTTTCCCAAAATGAGCACC+GGG | 0.499708 | 4.2:+10541395 | None:intergenic |
| AGTCGGAAAGATCCAAAGTC+AGG | 0.515039 | 4.2:+10543529 | MS.gene70355:CDS |
| GCTTTCTGGGATATACTACT+AGG | 0.517919 | 4.2:-10543696 | None:intergenic |
| TCTACAGCTGCTTGTAGGGT+GGG | 0.517951 | 4.2:-10544235 | None:intergenic |
| GTATAACTTTACCAGAAGCC+TGG | 0.521516 | 4.2:-10543054 | None:intergenic |
| AGTGATTGCAGTTTGCTCAC+CGG | 0.523981 | 4.2:+10542041 | MS.gene70355:CDS |
| TATAACTTTACCAGAAGCCT+GGG | 0.526263 | 4.2:-10543053 | None:intergenic |
| ACGTTTCCCAAAATGAGCAC+CGG | 0.529984 | 4.2:+10541394 | None:intergenic |
| CTCTACAGCTGCTTGTAGGG+TGG | 0.533083 | 4.2:-10544236 | None:intergenic |
| GGAGTTGCTGCATTAGGACT+AGG | 0.535279 | 4.2:+10543720 | MS.gene70355:CDS |
| ACAAGGTATACCCCTAATGC+TGG | 0.536420 | 4.2:+10541810 | MS.gene70355:CDS |
| TTACCCAGAAATGGCAAGGT+TGG | 0.540508 | 4.2:+10542845 | MS.gene70355:CDS |
| TAACTGACCCAAAATGGAGC+TGG | 0.543528 | 4.2:-10542825 | None:intergenic |
| TGTTAAAATATCTGAACCAC+AGG | 0.548557 | 4.2:+10543833 | MS.gene70355:CDS |
| AGGCCTTTGCAATGACGGGT+TGG | 0.554930 | 4.2:+10543465 | MS.gene70355:intron |
| AGATTGTAGCAAAGCACCCC+AGG | 0.557592 | 4.2:+10543036 | MS.gene70355:CDS |
| TTGCATCTTTACCGAAAATG+TGG | 0.558238 | 4.2:+10543218 | MS.gene70355:CDS |
| CAAAGCTTGTATGCGTTGCG+GGG | 0.560240 | 4.2:-10543198 | None:intergenic |
| ACATTACTCACCTCATCTCC+CGG | 0.560555 | 4.2:-10542060 | None:intergenic |
| AGTAGTATATCCCAGAAAGC+AGG | 0.566034 | 4.2:+10543699 | MS.gene70355:CDS |
| TCTTCTGTTCTGCTCCACCC+CGG | 0.567889 | 4.2:-10541413 | None:intergenic |
| GGGATGCCGCATAAGAGATA+CGG | 0.568342 | 4.2:-10544210 | None:intergenic |
| ATTGACGTTGGAAGAATCAC+AGG | 0.568374 | 4.2:-10542879 | None:intergenic |
| ATATCTGTTGGATAAAGGCC+AGG | 0.568797 | 4.2:+10544057 | MS.gene70355:CDS |
| TCGTCACCAAATGCACTCCC+TGG | 0.571993 | 4.2:-10544178 | None:intergenic |
| AAATTGTTGGATATTGACGT+TGG | 0.572136 | 4.2:-10542891 | None:intergenic |
| CCGCCAACCCGTCATTGCAA+AGG | 0.572920 | 4.2:-10543468 | None:intergenic |
| TGTTCACCATCTAACCCGAC+AGG | 0.575722 | 4.2:+10542975 | MS.gene70355:CDS |
| TGTATCAAAATCAGGTTCAC+CGG | 0.576041 | 4.2:-10541593 | None:intergenic |
| TACAGGTAGCACTTGTTCCA+GGG | 0.580306 | 4.2:+10544161 | MS.gene70355:intron |
| GCATTAGGACTAGGCTATGC+CGG | 0.581439 | 4.2:+10543729 | MS.gene70355:CDS |
| ACTAGGCTATGCCGGTGGGG+AGG | 0.582975 | 4.2:+10543737 | MS.gene70355:CDS |
| TGCAAAGCTTGTATGCGTTG+CGG | 0.587218 | 4.2:-10543200 | None:intergenic |
| AAGTGCAGCAGAGGTAAGAG+AGG | 0.587270 | 4.2:-10544278 | None:intergenic |
| AGCTAAGCAGAGTATTACTC+AGG | 0.591051 | 4.2:+10542017 | MS.gene70355:CDS |
| AATACCTCGGCAATAACCGC+GGG | 0.593217 | 4.2:-10541616 | None:intergenic |
| TTAGGATACACAGATCCTGT+CGG | 0.593757 | 4.2:-10542990 | None:intergenic |
| AAGAATCACAGGTGTTGCAT+CGG | 0.596920 | 4.2:-10542868 | None:intergenic |
| AGTTTGCTCACCGGGAGATG+AGG | 0.598945 | 4.2:+10542050 | MS.gene70355:CDS |
| GGTAGAAACAGCCTCCCCAC+CGG | 0.605264 | 4.2:-10543748 | None:intergenic |
| ATATTAAACAAGTGCAGCAG+AGG | 0.613245 | 4.2:-10544287 | None:intergenic |
| GAAAGCGTTTAGAGAACGAA+GGG | 0.615579 | 4.2:+10543776 | MS.gene70355:CDS |
| CTATTACGGAAAAGAAGCTG+AGG | 0.615986 | 4.2:+10543997 | MS.gene70355:CDS |
| TATTACGGAAAAGAAGCTGA+GGG | 0.619913 | 4.2:+10543998 | MS.gene70355:CDS |
| TAGGACTAGGCTATGCCGGT+GGG | 0.621853 | 4.2:+10543733 | MS.gene70355:CDS |
| TGGGGAGGCTGTTTCTACCA+TGG | 0.623436 | 4.2:+10543752 | MS.gene70355:CDS |
| AAATACCTCGGCAATAACCG+CGG | 0.623880 | 4.2:-10541617 | None:intergenic |
| GGGATTAATGCAATTCGTGA+AGG | 0.627742 | 4.2:+10541783 | MS.gene70355:CDS |
| TTCTAATGTTCCAGCATTAG+GGG | 0.630270 | 4.2:-10541820 | None:intergenic |
| TCAGTTACCCAGAAATGGCA+AGG | 0.632651 | 4.2:+10542841 | MS.gene70355:CDS |
| TCCCAAAATGAGCACCGGGG+TGG | 0.635586 | 4.2:+10541399 | None:intergenic |
| TTCTCTAAACGCTTTCACCA+TGG | 0.637703 | 4.2:-10543769 | None:intergenic |
| TACACCCGCGGTTATTGCCG+AGG | 0.640881 | 4.2:+10541612 | MS.gene70355:CDS |
| CAGATATCGACAGAGAGACT+CGG | 0.642319 | 4.2:-10544041 | None:intergenic |
| AAAGCTTGTATGCGTTGCGG+GGG | 0.643467 | 4.2:-10543197 | None:intergenic |
| TTGCATCCGTATCTCTTATG+CGG | 0.655090 | 4.2:+10544204 | MS.gene70355:CDS |
| TTAGGACTAGGCTATGCCGG+TGG | 0.656689 | 4.2:+10543732 | MS.gene70355:CDS |
| GCCAGCTTGAACAAGAGCAG+TGG | 0.668141 | 4.2:-10541548 | None:intergenic |
| GGTTTGACAGCATTAACACG+TGG | 0.682883 | 4.2:-10541496 | None:intergenic |
| CAATTCGTGAAGGATACACA+AGG | 0.683943 | 4.2:+10541793 | MS.gene70355:CDS |
| AGGACTAGGCTATGCCGGTG+GGG | 0.684712 | 4.2:+10543734 | MS.gene70355:CDS |
| TGAAAGCGTTTAGAGAACGA+AGG | 0.691237 | 4.2:+10543775 | MS.gene70355:CDS |
| ATAACTTTACCAGAAGCCTG+GGG | 0.763746 | 4.2:-10543052 | None:intergenic |
| GTTTCCCAAAATGAGCACCG+GGG | 0.831303 | 4.2:+10541396 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATTATACTATTATTATTT+AGG | + | chr4.2:10542091-10542110 | MS.gene70355:intron | 10.0% |
| !!! | TTAATACTTAATAACATTTT+TGG | - | chr4.2:10542270-10542289 | None:intergenic | 10.0% |
| !!! | ATTTTTTATACGAATATTTC+AGG | + | chr4.2:10542794-10542813 | MS.gene70355:intron | 15.0% |
| !!! | TTATTATTTAGGATAAACAT+CGG | + | chr4.2:10542102-10542121 | MS.gene70355:intron | 15.0% |
| !! | AATAAACTAGAAACAACTTA+TGG | - | chr4.2:10541718-10541737 | None:intergenic | 20.0% |
| !! | AATTCAAATTGAAAATACCT+CGG | - | chr4.2:10541632-10541651 | None:intergenic | 20.0% |
| !! | AGAATAACTATTAAAGGAAT+AGG | - | chr4.2:10543882-10543901 | None:intergenic | 20.0% |
| !! | TAAAGTGAGTAAAAGATATA+AGG | - | chr4.2:10542516-10542535 | None:intergenic | 20.0% |
| !! | TTACAGAATTATGTTTGATT+TGG | + | chr4.2:10542725-10542744 | MS.gene70355:intron | 20.0% |
| !!! | AAGGATTTTACAAAAATGAA+AGG | - | chr4.2:10542497-10542516 | None:intergenic | 20.0% |
| !!! | ACTTAATAACATTTTTGGAT+GGG | - | chr4.2:10542265-10542284 | None:intergenic | 20.0% |
| !!! | ATCTCTTCAAGTAAATTTTT+AGG | - | chr4.2:10543011-10543030 | None:intergenic | 20.0% |
| !!! | CTGTATTATATGGTTTTATT+TGG | + | chr4.2:10541889-10541908 | MS.gene70355:intron | 20.0% |
| !!! | TAAAACAGTTTAAAATCATC+AGG | - | chr4.2:10543441-10543460 | None:intergenic | 20.0% |
| !!! | TACTTAATAACATTTTTGGA+TGG | - | chr4.2:10542266-10542285 | None:intergenic | 20.0% |
| !!! | TTAGTTTTATTACTTGTGTA+TGG | + | chr4.2:10541749-10541768 | MS.gene70355:intron | 20.0% |
| ! | AAAATCATCAGGATAAAATC+TGG | - | chr4.2:10543430-10543449 | None:intergenic | 25.0% |
| ! | ACAACTATTAAGATCTTAAG+AGG | - | chr4.2:10543131-10543150 | None:intergenic | 25.0% |
| ! | ACATGGAGAATAACTATTAA+AGG | - | chr4.2:10543888-10543907 | None:intergenic | 25.0% |
| ! | ATGTTCTCTTTCTATCATAA+TGG | + | chr4.2:10543289-10543308 | MS.gene70355:intron | 25.0% |
| ! | TCAAGATAATGCATAGAATA+AGG | - | chr4.2:10543580-10543599 | None:intergenic | 25.0% |
| ! | TGGATTAATTATATGAGATG+TGG | + | chr4.2:10541909-10541928 | MS.gene70355:intron | 25.0% |
| ! | TGTAGATTATGAAATAAGCA+TGG | + | chr4.2:10543397-10543416 | MS.gene70355:intron | 25.0% |
| ! | TTTGATTGTGCTGTATTATA+TGG | + | chr4.2:10541879-10541898 | MS.gene70355:intron | 25.0% |
| !! | ATTGAATTTAGTTCACTTCA+GGG | + | chr4.2:10543673-10543692 | MS.gene70355:intron | 25.0% |
| !! | TATTGAATTTAGTTCACTTC+AGG | + | chr4.2:10543672-10543691 | MS.gene70355:intron | 25.0% |
| !! | TCTTGACTTTTCAGTAATTT+TGG | - | chr4.2:10542943-10542962 | None:intergenic | 25.0% |
| !! | TTTTGTCATAATGAAAACCT+AGG | + | chr4.2:10542332-10542351 | MS.gene70355:intron | 25.0% |
| !!! | AAAAGTTTTAGCGAAATTGA+TGG | + | chr4.2:10543810-10543829 | MS.gene70355:CDS | 25.0% |
| !!! | TACATTTTACGTTTTTTGAG+AGG | + | chr4.2:10542658-10542677 | MS.gene70355:intron | 25.0% |
| AAATTGTTGGATATTGACGT+TGG | - | chr4.2:10542894-10542913 | None:intergenic | 30.0% | |
| AATTCTAATGTTCCAGCATT+AGG | - | chr4.2:10541825-10541844 | None:intergenic | 30.0% | |
| ACTGCTGTAATAAAATGCTT+CGG | - | chr4.2:10543512-10543531 | None:intergenic | 30.0% | |
| ACTTATGGACATGTTATAAG+TGG | - | chr4.2:10541703-10541722 | None:intergenic | 30.0% | |
| ATCAACTTCCAATTCAGAAT+CGG | - | chr4.2:10541464-10541483 | None:intergenic | 30.0% | |
| ATGCTGGAACATTAGAATTA+CGG | + | chr4.2:10541826-10541845 | MS.gene70355:CDS | 30.0% | |
| ATGCTTCAATGTATTCAACT+TGG | + | chr4.2:10543096-10543115 | MS.gene70355:intron | 30.0% | |
| ATTCTAATGTTCCAGCATTA+GGG | - | chr4.2:10541824-10541843 | None:intergenic | 30.0% | |
| GATTATGAAATAAGCATGGA+TGG | + | chr4.2:10543401-10543420 | MS.gene70355:intron | 30.0% | |
| GCAATTTGTCATAAGCTTAA+AGG | + | chr4.2:10541852-10541871 | MS.gene70355:CDS | 30.0% | |
| GGGATTTAAAAGGAAATTGT+TGG | - | chr4.2:10542907-10542926 | None:intergenic | 30.0% | |
| GTTTGTATTCAATGAGCAAA+AGG | - | chr4.2:10542573-10542592 | None:intergenic | 30.0% | |
| TAAAATACTGCTAGTATACC+TGG | - | chr4.2:10544078-10544097 | None:intergenic | 30.0% | |
| TGTTAAAATATCTGAACCAC+AGG | + | chr4.2:10543833-10543852 | MS.gene70355:CDS | 30.0% | |
| TTAGTAACAACAATCTGATC+AGG | - | chr4.2:10541994-10542013 | None:intergenic | 30.0% | |
| TTTCTATCATAATGGTATCG+AGG | + | chr4.2:10543297-10543316 | MS.gene70355:intron | 30.0% | |
| ! | AAGCATTTTATTACAGCAGT+CGG | + | chr4.2:10543512-10543531 | MS.gene70355:CDS | 30.0% |
| ! | AATGCATCAAAGATTTTCCT+AGG | - | chr4.2:10542352-10542371 | None:intergenic | 30.0% |
| ! | AATTTTGGACTCAAGAAGTT+TGG | - | chr4.2:10542928-10542947 | None:intergenic | 30.0% |
| ! | ACTTGATTTCTGTTTGAGTT+GGG | + | chr4.2:10543599-10543618 | MS.gene70355:intron | 30.0% |
| ! | ATACTTTCTTTTCTCTTGCA+GGG | + | chr4.2:10543944-10543963 | MS.gene70355:intron | 30.0% |
| ! | ATTGATTTCAGCTCCTATTA+CGG | + | chr4.2:10543983-10544002 | MS.gene70355:CDS | 30.0% |
| ! | ATTTTAAACTGTTTTACCGC+AGG | + | chr4.2:10543445-10543464 | MS.gene70355:intron | 30.0% |
| ! | ATTTTGGACTCAAGAAGTTT+GGG | - | chr4.2:10542927-10542946 | None:intergenic | 30.0% |
| ! | CAAGAAGTTTGGGATTTAAA+AGG | - | chr4.2:10542917-10542936 | None:intergenic | 30.0% |
| ! | GATCAGATTGTTGTTACTAA+TGG | + | chr4.2:10541994-10542013 | MS.gene70355:CDS | 30.0% |
| ! | TAACATTGTGTTTTGTCTAC+AGG | + | chr4.2:10544144-10544163 | MS.gene70355:intron | 30.0% |
| ! | TATACTTTCTTTTCTCTTGC+AGG | + | chr4.2:10543943-10543962 | MS.gene70355:intron | 30.0% |
| ! | TTACTTGTGTATGGTAATGT+AGG | + | chr4.2:10541758-10541777 | MS.gene70355:intron | 30.0% |
| ! | TTCTATCATAATGGTATCGA+GGG | + | chr4.2:10543298-10543317 | MS.gene70355:intron | 30.0% |
| ! | TTTTGACAATGTGTCGTAAT+TGG | + | chr4.2:10541933-10541952 | MS.gene70355:intron | 30.0% |
| !! | AACTGTGAATGGATTTTCTA+AGG | + | chr4.2:10543252-10543271 | MS.gene70355:CDS | 30.0% |
| !! | ATAGCTTTGAAGAAAGAGAA+AGG | - | chr4.2:10543357-10543376 | None:intergenic | 30.0% |
| !! | GTTTCTAGTTTATTCGAACA+TGG | + | chr4.2:10541724-10541743 | MS.gene70355:intron | 30.0% |
| !! | TCTTAATAGTTGTTTTGTGC+AGG | + | chr4.2:10543138-10543157 | MS.gene70355:intron | 30.0% |
| AAAGGAATAGGCAGATAAAC+TGG | - | chr4.2:10543870-10543889 | None:intergenic | 35.0% | |
| AACAGAACTCTAACTGTGAA+TGG | + | chr4.2:10543241-10543260 | MS.gene70355:CDS | 35.0% | |
| ATACCGAATCAACAAATCGT+AGG | - | chr4.2:10542193-10542212 | None:intergenic | 35.0% | |
| ATCATCAGGATAAAATCTGG+AGG | - | chr4.2:10543427-10543446 | None:intergenic | 35.0% | |
| CTATGCTGCATTTCACAATA+TGG | + | chr4.2:10543373-10543392 | MS.gene70355:intron | 35.0% | |
| CTCAAAATCCGATTCTGAAT+TGG | + | chr4.2:10541453-10541472 | MS.gene70355:CDS | 35.0% | |
| CTGCTGTAATAAAATGCTTC+GGG | - | chr4.2:10543511-10543530 | None:intergenic | 35.0% | |
| GACAGAAAAGTGACAAAACA+TGG | - | chr4.2:10543905-10543924 | None:intergenic | 35.0% | |
| GACTTGATTTCTGTTTGAGT+TGG | + | chr4.2:10543598-10543617 | MS.gene70355:intron | 35.0% | |
| GCTAATAGCCTAATCATCTA+TGG | - | chr4.2:10542412-10542431 | None:intergenic | 35.0% | |
| TACCGAATCAACAAATCGTA+GGG | - | chr4.2:10542192-10542211 | None:intergenic | 35.0% | |
| TAGAATAAGGCTGACAAATG+TGG | - | chr4.2:10543567-10543586 | None:intergenic | 35.0% | |
| TAGTCCAAAACCAAACCAAA+TGG | - | chr4.2:10542633-10542652 | None:intergenic | 35.0% | |
| TATAACTTTACCAGAAGCCT+GGG | - | chr4.2:10543056-10543075 | None:intergenic | 35.0% | |
| TATTACGGAAAAGAAGCTGA+GGG | + | chr4.2:10543998-10544017 | MS.gene70355:CDS | 35.0% | |
| TCGGTATTTATGCACTGAAT+TGG | + | chr4.2:10542206-10542225 | MS.gene70355:intron | 35.0% | |
| TGACCTTCAATATGAAGTGT+TGG | + | chr4.2:10544107-10544126 | MS.gene70355:intron | 35.0% | |
| TGTATCAAAATCAGGTTCAC+CGG | - | chr4.2:10541596-10541615 | None:intergenic | 35.0% | |
| TGTCGATATCTGTTGGATAA+AGG | + | chr4.2:10544052-10544071 | MS.gene70355:CDS | 35.0% | |
| TTATGCACTGAATTGGCATT+GGG | + | chr4.2:10542213-10542232 | MS.gene70355:intron | 35.0% | |
| TTCTAATGTTCCAGCATTAG+GGG | - | chr4.2:10541823-10541842 | None:intergenic | 35.0% | |
| TTCTGAATTCTGATGCCATT+TGG | + | chr4.2:10542615-10542634 | MS.gene70355:intron | 35.0% | |
| TTGCATCTTTACCGAAAATG+TGG | + | chr4.2:10543218-10543237 | MS.gene70355:CDS | 35.0% | |
| TTTATGCACTGAATTGGCAT+TGG | + | chr4.2:10542212-10542231 | MS.gene70355:intron | 35.0% | |
| ! | AATTCTGATGCCATTTGGTT+TGG | + | chr4.2:10542620-10542639 | MS.gene70355:intron | 35.0% |
| ! | AGAGTTCTGTTCCACATTTT+CGG | - | chr4.2:10543232-10543251 | None:intergenic | 35.0% |
| ! | CATTATTCCAGCTCCATTTT+GGG | + | chr4.2:10542818-10542837 | MS.gene70355:CDS | 35.0% |
| ! | TCATTATTCCAGCTCCATTT+TGG | + | chr4.2:10542817-10542836 | MS.gene70355:CDS | 35.0% |
| ! | TTAAACATGTGGTGATGTCA+TGG | - | chr4.2:10542165-10542184 | None:intergenic | 35.0% |
| !! | AACCCTACGATTTGTTGATT+CGG | + | chr4.2:10542187-10542206 | MS.gene70355:intron | 35.0% |
| !! | GTAATTGGTTGATTTTGCAG+AGG | + | chr4.2:10541948-10541967 | MS.gene70355:intron | 35.0% |
| AGTAGTATATCCCAGAAAGC+AGG | + | chr4.2:10543699-10543718 | MS.gene70355:CDS | 40.0% | |
| ATAAAACGCGTCAGCTACTA+AGG | - | chr4.2:10543655-10543674 | None:intergenic | 40.0% | |
| ATAACTACTTAGCGCGTGTT+TGG | + | chr4.2:10542126-10542145 | MS.gene70355:intron | 40.0% | |
| ATAACTTTACCAGAAGCCTG+GGG | - | chr4.2:10543055-10543074 | None:intergenic | 40.0% | |
| ATATCTGTTGGATAAAGGCC+AGG | + | chr4.2:10544057-10544076 | MS.gene70355:CDS | 40.0% | |
| ATCAGAATTCAGAACAGTGC+AGG | - | chr4.2:10542609-10542628 | None:intergenic | 40.0% | |
| ATTCTCTACAGCTGCTTGTA+GGG | - | chr4.2:10544242-10544261 | None:intergenic | 40.0% | |
| ATTGACGTTGGAAGAATCAC+AGG | - | chr4.2:10542882-10542901 | None:intergenic | 40.0% | |
| CAATTCGTGAAGGATACACA+AGG | + | chr4.2:10541793-10541812 | MS.gene70355:CDS | 40.0% | |
| CGAATCAACATACCTGACTT+TGG | - | chr4.2:10543544-10543563 | None:intergenic | 40.0% | |
| CTATTACGGAAAAGAAGCTG+AGG | + | chr4.2:10543997-10544016 | MS.gene70355:CDS | 40.0% | |
| GCACCAACACTTCATATTGA+AGG | - | chr4.2:10544113-10544132 | None:intergenic | 40.0% | |
| GGGATTAATGCAATTCGTGA+AGG | + | chr4.2:10541783-10541802 | MS.gene70355:CDS | 40.0% | |
| GTAATAGCGACAGTTCTTGA+AGG | - | chr4.2:10541520-10541539 | None:intergenic | 40.0% | |
| GTATAACTTTACCAGAAGCC+TGG | - | chr4.2:10543057-10543076 | None:intergenic | 40.0% | |
| GTGATAACTGTTCTATCCTC+TGG | + | chr4.2:10542383-10542402 | MS.gene70355:intron | 40.0% | |
| TAATCATCTATGGCATCCAG+AGG | - | chr4.2:10542402-10542421 | None:intergenic | 40.0% | |
| TAGAGAACGAAGGGATTACT+TGG | + | chr4.2:10543785-10543804 | MS.gene70355:CDS | 40.0% | |
| TATTCTCTACAGCTGCTTGT+AGG | - | chr4.2:10544243-10544262 | None:intergenic | 40.0% | |
| TCTGGATGCCATAGATGATT+AGG | + | chr4.2:10542401-10542420 | MS.gene70355:intron | 40.0% | |
| TTAGGATACACAGATCCTGT+CGG | - | chr4.2:10542993-10543012 | None:intergenic | 40.0% | |
| TTCTCTAAACGCTTTCACCA+TGG | - | chr4.2:10543772-10543791 | None:intergenic | 40.0% | |
| TTGCATCCGTATCTCTTATG+CGG | + | chr4.2:10544204-10544223 | MS.gene70355:CDS | 40.0% | |
| ! | AAGAATCACAGGTGTTGCAT+CGG | - | chr4.2:10542871-10542890 | None:intergenic | 40.0% |
| ! | AGCTAAGCAGAGTATTACTC+AGG | + | chr4.2:10542017-10542036 | MS.gene70355:CDS | 40.0% |
| ! | CTCAGCTTCTTTTCCGTAAT+AGG | - | chr4.2:10543999-10544018 | None:intergenic | 40.0% |
| ! | TGTGTATGGTAATGTAGGCT+GGG | + | chr4.2:10541763-10541782 | MS.gene70355:intron | 40.0% |
| ! | TTGTGTATGGTAATGTAGGC+TGG | + | chr4.2:10541762-10541781 | MS.gene70355:intron | 40.0% |
| !! | GAAAGCGTTTAGAGAACGAA+GGG | + | chr4.2:10543776-10543795 | MS.gene70355:CDS | 40.0% |
| !! | GCTTTCTGGGATATACTACT+AGG | - | chr4.2:10543699-10543718 | None:intergenic | 40.0% |
| !! | GTTGATTTTGCAGAGGAGAA+TGG | + | chr4.2:10541955-10541974 | MS.gene70355:intron | 40.0% |
| !! | TAACATTTTTGGATGGGCGT+TGG | - | chr4.2:10542259-10542278 | None:intergenic | 40.0% |
| !! | TGAAAGCGTTTAGAGAACGA+AGG | + | chr4.2:10543775-10543794 | MS.gene70355:CDS | 40.0% |
| !!! | GATGCCATTTGGTTTGGTTT+TGG | + | chr4.2:10542626-10542645 | MS.gene70355:intron | 40.0% |
| AAAGCAGGAGTTGCTGCATT+AGG | + | chr4.2:10543714-10543733 | MS.gene70355:CDS | 45.0% | |
| AAATACCTCGGCAATAACCG+CGG | - | chr4.2:10541620-10541639 | None:intergenic | 45.0% | |
| ACAAGGTATACCCCTAATGC+TGG | + | chr4.2:10541810-10541829 | MS.gene70355:CDS | 45.0% | |
| ACATTACTCACCTCATCTCC+CGG | - | chr4.2:10542063-10542082 | None:intergenic | 45.0% | |
| ACTGGATGAATTTGCACCTG+TGG | - | chr4.2:10543852-10543871 | None:intergenic | 45.0% | |
| AGTCGGAAAGATCCAAAGTC+AGG | + | chr4.2:10543529-10543548 | MS.gene70355:CDS | 45.0% | |
| CAGATATCGACAGAGAGACT+CGG | - | chr4.2:10544044-10544063 | None:intergenic | 45.0% | |
| CGTAGGGTTGCTTAAACATG+TGG | - | chr4.2:10542176-10542195 | None:intergenic | 45.0% | |
| GGAAAAGAAGCTGAGGGATT+TGG | + | chr4.2:10544004-10544023 | MS.gene70355:CDS | 45.0% | |
| GGTTTGACAGCATTAACACG+TGG | - | chr4.2:10541499-10541518 | None:intergenic | 45.0% | |
| GTCTCTCTGTCGATATCTGT+TGG | + | chr4.2:10544045-10544064 | MS.gene70355:CDS | 45.0% | |
| TAACTGACCCAAAATGGAGC+TGG | - | chr4.2:10542828-10542847 | None:intergenic | 45.0% | |
| TACAGGTAGCACTTGTTCCA+GGG | + | chr4.2:10544161-10544180 | MS.gene70355:intron | 45.0% | |
| TAGGATACACAGATCCTGTC+GGG | - | chr4.2:10542992-10543011 | None:intergenic | 45.0% | |
| TCAGTTACCCAGAAATGGCA+AGG | + | chr4.2:10542841-10542860 | MS.gene70355:CDS | 45.0% | |
| TCTGGGTAACTGACCCAAAA+TGG | - | chr4.2:10542834-10542853 | None:intergenic | 45.0% | |
| TGCAAAGCTTGTATGCGTTG+CGG | - | chr4.2:10543203-10543222 | None:intergenic | 45.0% | |
| TTACCCAGAAATGGCAAGGT+TGG | + | chr4.2:10542845-10542864 | MS.gene70355:CDS | 45.0% | |
| TTGGGTCAGTTACCCAGAAA+TGG | + | chr4.2:10542836-10542855 | MS.gene70355:CDS | 45.0% | |
| ! | AGTGATTGCAGTTTGCTCAC+CGG | + | chr4.2:10542041-10542060 | MS.gene70355:CDS | 45.0% |
| !! | ACCTGATTTTGATACACCCG+CGG | + | chr4.2:10541600-10541619 | MS.gene70355:CDS | 45.0% |
| !! | CTGTTTGAGTTGGGATACTG+TGG | + | chr4.2:10543608-10543627 | MS.gene70355:intron | 45.0% |
| AAAGCTTGTATGCGTTGCGG+GGG | - | chr4.2:10543200-10543219 | None:intergenic | 50.0% | |
| AAGTGCAGCAGAGGTAAGAG+AGG | - | chr4.2:10544281-10544300 | None:intergenic | 50.0% | |
| AATACCTCGGCAATAACCGC+GGG | - | chr4.2:10541619-10541638 | None:intergenic | 50.0% | |
| ACCGCGGGTGTATCAAAATC+AGG | - | chr4.2:10541604-10541623 | None:intergenic | 50.0% | |
| ATGCAGCAACTCCTGCTTTC+TGG | - | chr4.2:10543713-10543732 | None:intergenic | 50.0% | |
| CAAAGCTTGTATGCGTTGCG+GGG | - | chr4.2:10543201-10543220 | None:intergenic | 50.0% | |
| CTACAGGTAGCACTTGTTCC+AGG | + | chr4.2:10544160-10544179 | MS.gene70355:intron | 50.0% | |
| GCAAAGCTTGTATGCGTTGC+GGG | - | chr4.2:10543202-10543221 | None:intergenic | 50.0% | |
| GCATTAGGACTAGGCTATGC+CGG | + | chr4.2:10543729-10543748 | MS.gene70355:CDS | 50.0% | |
| GGAGTTGCTGCATTAGGACT+AGG | + | chr4.2:10543720-10543739 | MS.gene70355:CDS | 50.0% | |
| GGGATGCCGCATAAGAGATA+CGG | - | chr4.2:10544213-10544232 | None:intergenic | 50.0% | |
| TCTACAGCTGCTTGTAGGGT+GGG | - | chr4.2:10544238-10544257 | None:intergenic | 50.0% | |
| TGCAGCAACTCCTGCTTTCT+GGG | - | chr4.2:10543712-10543731 | None:intergenic | 50.0% | |
| TGGCGTTCCTGTTATTCGCT+TGG | + | chr4.2:10541567-10541586 | MS.gene70355:CDS | 50.0% | |
| TGTTCACCATCTAACCCGAC+AGG | + | chr4.2:10542975-10542994 | MS.gene70355:CDS | 50.0% | |
| ! | ACAGATCCTGTCGGGTTAGA+TGG | - | chr4.2:10542984-10543003 | None:intergenic | 50.0% |
| ! | AGATTGTAGCAAAGCACCCC+AGG | + | chr4.2:10543036-10543055 | MS.gene70355:CDS | 50.0% |
| ! | CTTGTTCCAGGGAGTGCATT+TGG | + | chr4.2:10544172-10544191 | MS.gene70355:CDS | 50.0% |
| ! | GTGATTGCAGTTTGCTCACC+GGG | + | chr4.2:10542042-10542061 | MS.gene70355:CDS | 50.0% |
| ! | TGGCGGCTTGGATATATTGC+TGG | + | chr4.2:10543485-10543504 | MS.gene70355:CDS | 50.0% |
| ACCGCAGGCCTTTGCAATGA+CGG | + | chr4.2:10543460-10543479 | MS.gene70355:intron | 55.0% | |
| AGCTGCTTGTAGGGTGGGAA+GGG | - | chr4.2:10544233-10544252 | None:intergenic | 55.0% | |
| CCTGTTATTCGCTTGGCTGC+CGG | + | chr4.2:10541574-10541593 | MS.gene70355:CDS | 55.0% | |
| CTCTACAGCTGCTTGTAGGG+TGG | - | chr4.2:10544239-10544258 | None:intergenic | 55.0% | |
| GCCACTGCTCTTGTTCAAGC+TGG | + | chr4.2:10541547-10541566 | MS.gene70355:CDS | 55.0% | |
| GCCAGCTTGAACAAGAGCAG+TGG | - | chr4.2:10541551-10541570 | None:intergenic | 55.0% | |
| TAGGACTAGGCTATGCCGGT+GGG | + | chr4.2:10543733-10543752 | MS.gene70355:CDS | 55.0% | |
| TCGTCACCAAATGCACTCCC+TGG | - | chr4.2:10544181-10544200 | None:intergenic | 55.0% | |
| TCTTCTGTTCTGCTCCACCC+CGG | - | chr4.2:10541416-10541435 | None:intergenic | 55.0% | |
| TTAGGACTAGGCTATGCCGG+TGG | + | chr4.2:10543732-10543751 | MS.gene70355:CDS | 55.0% | |
| ! | AGTTTGCTCACCGGGAGATG+AGG | + | chr4.2:10542050-10542069 | MS.gene70355:CDS | 55.0% |
| ! | CGGCCAACCTTGCCATTTCT+GGG | - | chr4.2:10542851-10542870 | None:intergenic | 55.0% |
| ! | TCGGCCAACCTTGCCATTTC+TGG | - | chr4.2:10542852-10542871 | None:intergenic | 55.0% |
| !! | AGGCCTTTGCAATGACGGGT+TGG | + | chr4.2:10543465-10543484 | MS.gene70355:intron | 55.0% |
| !! | CCTTTGCAATGACGGGTTGG+CGG | + | chr4.2:10543468-10543487 | MS.gene70355:CDS | 55.0% |
| !! | TGGGGAGGCTGTTTCTACCA+TGG | + | chr4.2:10543752-10543771 | MS.gene70355:CDS | 55.0% |
| AGGACTAGGCTATGCCGGTG+GGG | + | chr4.2:10543734-10543753 | MS.gene70355:CDS | 60.0% | |
| CAGCTGCTTGTAGGGTGGGA+AGG | - | chr4.2:10544234-10544253 | None:intergenic | 60.0% | |
| CCCGTCATTGCAAAGGCCTG+CGG | - | chr4.2:10543464-10543483 | None:intergenic | 60.0% | |
| CCGCAGGCCTTTGCAATGAC+GGG | + | chr4.2:10543461-10543480 | MS.gene70355:intron | 60.0% | |
| CCGCCAACCCGTCATTGCAA+AGG | - | chr4.2:10543471-10543490 | None:intergenic | 60.0% | |
| CCGGCAGCCAAGCGAATAAC+AGG | - | chr4.2:10541577-10541596 | None:intergenic | 60.0% | |
| GGTAGAAACAGCCTCCCCAC+CGG | - | chr4.2:10543751-10543770 | None:intergenic | 60.0% | |
| TACACCCGCGGTTATTGCCG+AGG | + | chr4.2:10541612-10541631 | MS.gene70355:CDS | 60.0% | |
| ! | AGCAAAGCACCCCAGGCTTC+TGG | + | chr4.2:10543043-10543062 | MS.gene70355:CDS | 60.0% |
| ACTAGGCTATGCCGGTGGGG+AGG | + | chr4.2:10543737-10543756 | MS.gene70355:CDS | 65.0% | |
| !! | GCAATGACGGGTTGGCGGCT+TGG | + | chr4.2:10543473-10543492 | MS.gene70355:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 10541406 | 10544306 | 10541406 | ID=MS.gene70355 |
| chr4.2 | mRNA | 10541406 | 10544306 | 10541406 | ID=MS.gene70355.t1;Parent=MS.gene70355 |
| chr4.2 | exon | 10541406 | 10541633 | 10541406 | ID=MS.gene70355.t1.exon1;Parent=MS.gene70355.t1 |
| chr4.2 | CDS | 10541406 | 10541633 | 10541406 | ID=cds.MS.gene70355.t1;Parent=MS.gene70355.t1 |
| chr4.2 | exon | 10541780 | 10541873 | 10541780 | ID=MS.gene70355.t1.exon2;Parent=MS.gene70355.t1 |
| chr4.2 | CDS | 10541780 | 10541873 | 10541780 | ID=cds.MS.gene70355.t1;Parent=MS.gene70355.t1 |
| chr4.2 | exon | 10541968 | 10542071 | 10541968 | ID=MS.gene70355.t1.exon3;Parent=MS.gene70355.t1 |
| chr4.2 | CDS | 10541968 | 10542071 | 10541968 | ID=cds.MS.gene70355.t1;Parent=MS.gene70355.t1 |
| chr4.2 | exon | 10542816 | 10543064 | 10542816 | ID=MS.gene70355.t1.exon4;Parent=MS.gene70355.t1 |
| chr4.2 | CDS | 10542816 | 10543064 | 10542816 | ID=cds.MS.gene70355.t1;Parent=MS.gene70355.t1 |
| chr4.2 | exon | 10543160 | 10543273 | 10543160 | ID=MS.gene70355.t1.exon5;Parent=MS.gene70355.t1 |
| chr4.2 | CDS | 10543160 | 10543273 | 10543160 | ID=cds.MS.gene70355.t1;Parent=MS.gene70355.t1 |
| chr4.2 | exon | 10543467 | 10543550 | 10543467 | ID=MS.gene70355.t1.exon6;Parent=MS.gene70355.t1 |
| chr4.2 | CDS | 10543467 | 10543550 | 10543467 | ID=cds.MS.gene70355.t1;Parent=MS.gene70355.t1 |
| chr4.2 | exon | 10543684 | 10543854 | 10543684 | ID=MS.gene70355.t1.exon7;Parent=MS.gene70355.t1 |
| chr4.2 | CDS | 10543684 | 10543854 | 10543684 | ID=cds.MS.gene70355.t1;Parent=MS.gene70355.t1 |
| chr4.2 | exon | 10543965 | 10544078 | 10543965 | ID=MS.gene70355.t1.exon8;Parent=MS.gene70355.t1 |
| chr4.2 | CDS | 10543965 | 10544078 | 10543965 | ID=cds.MS.gene70355.t1;Parent=MS.gene70355.t1 |
| chr4.2 | exon | 10544166 | 10544306 | 10544166 | ID=MS.gene70355.t1.exon9;Parent=MS.gene70355.t1 |
| chr4.2 | CDS | 10544166 | 10544306 | 10544166 | ID=cds.MS.gene70355.t1;Parent=MS.gene70355.t1 |
| Gene Sequence |
| Protein sequence |
