AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056899

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056899.t1 MTR_4g065060 90.802 424 23 3 1 424 1 408 2.28e-58 203
MS.gene056899.t1 MTR_4g065060 97.288 295 8 0 146 440 114 408 1.32e-18 89.4
MS.gene056899.t1 MTR_4g065060 97.153 281 8 0 178 458 114 394 3.81e-18 88.2
MS.gene056899.t1 MTR_4g065060 96.271 295 10 1 226 519 114 408 5.61e-17 84.3
MS.gene056899.t1 MTR_4g065060 96.271 295 10 1 194 487 114 408 7.07e-17 84.3
MS.gene056899.t1 MTR_4g065060 96.786 280 8 1 242 520 114 393 1.93e-16 82.8
MS.gene056899.t1 MTR_4g065060 95.374 281 12 1 258 537 114 394 2.25e-14 76.3
MS.gene056899.t1 MTR_4g065060 84.054 370 10 2 290 610 114 483 4.93e-14 75.1
MS.gene056899.t1 MTR_4g065093 87.838 370 10 3 1 346 1 359 1.64e-49 178
MS.gene056899.t1 MTR_0879s0010 99.259 135 1 0 129 263 25 159 8.00e-48 165
MS.gene056899.t1 MTR_0879s0010 99.259 135 1 0 145 279 25 159 8.00e-48 165
MS.gene056899.t1 MTR_0879s0010 97.778 135 3 0 97 231 25 159 1.92e-47 164
MS.gene056899.t1 MTR_0879s0010 97.778 135 3 0 113 247 25 159 1.92e-47 164
MS.gene056899.t1 MTR_0879s0010 97.778 135 3 0 161 295 25 159 1.92e-47 164
MS.gene056899.t1 MTR_0879s0010 97.778 135 3 0 177 311 25 159 1.92e-47 164
MS.gene056899.t1 MTR_0879s0010 97.037 135 4 0 193 327 25 159 1.38e-46 161
MS.gene056899.t1 MTR_0879s0010 97.037 135 4 0 225 359 25 159 2.08e-46 161
MS.gene056899.t1 MTR_0879s0010 96.296 135 5 0 209 343 25 159 2.90e-46 160
MS.gene056899.t1 MTR_0879s0010 97.015 134 4 0 322 455 26 159 3.82e-46 160
MS.gene056899.t1 MTR_0879s0010 97.778 135 3 0 305 439 25 159 6.19e-46 160
MS.gene056899.t1 MTR_0879s0010 97.037 135 4 0 241 375 25 159 9.62e-46 159
MS.gene056899.t1 MTR_0879s0010 96.296 135 5 0 257 391 25 159 1.34e-45 159
MS.gene056899.t1 MTR_0879s0010 96.296 135 5 0 289 423 25 159 1.48e-45 159
MS.gene056899.t1 MTR_0879s0010 96.296 135 4 1 385 518 25 159 2.55e-45 158
MS.gene056899.t1 MTR_0879s0010 94.815 135 7 0 273 407 25 159 3.54e-45 157
MS.gene056899.t1 MTR_0879s0010 97.778 135 2 1 401 534 25 159 6.68e-45 157
MS.gene056899.t1 MTR_0879s0010 97.778 135 2 1 417 550 25 159 6.68e-45 157
MS.gene056899.t1 MTR_0879s0010 96.947 131 4 0 85 215 29 159 1.75e-44 155
MS.gene056899.t1 MTR_0879s0010 95.556 135 5 1 337 470 25 159 2.23e-44 155
MS.gene056899.t1 MTR_0879s0010 95.556 135 5 1 353 486 25 159 2.23e-44 155
MS.gene056899.t1 MTR_0879s0010 94.815 135 6 1 369 502 25 159 3.10e-44 155
MS.gene056899.t1 MTR_0879s0010 95.489 133 6 0 464 596 25 157 1.09e-43 154
MS.gene056899.t1 MTR_0879s0010 73.596 178 28 2 22 199 1 159 2.39e-43 152
MS.gene056899.t1 MTR_0879s0010 94.815 135 6 1 433 566 25 159 9.76e-43 151
MS.gene056899.t1 MTR_0879s0010 94.815 135 6 1 449 582 25 159 9.76e-43 151
MS.gene056899.t1 MTR_0879s0010 92.248 129 8 1 480 608 25 151 1.38e-38 140
MS.gene056899.t1 MTR_2g098060 78.779 344 63 3 145 478 244 587 5.01e-21 97.8
MS.gene056899.t1 MTR_2g098060 79.942 344 61 5 273 608 244 587 2.43e-18 89.4
MS.gene056899.t1 MTR_2g098060 78.779 344 63 4 209 542 244 587 1.91e-17 86.3
MS.gene056899.t1 MTR_2g098060 83.819 309 43 3 97 399 280 587 5.16e-17 85.1
MS.gene056899.t1 MTR_2g098060 77.326 344 68 4 241 574 244 587 8.74e-16 81.3
MS.gene056899.t1 MTR_2g098060 83.860 285 39 3 89 367 304 587 6.81e-15 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 334 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGAGGGAGATGGAGGTGG+TGG 0.252384 4.2:-40078434 None:intergenic
GGTGGTGAGGGAGATGGTGG+AGG 0.278760 4.2:-40078389 None:intergenic
TTGTAGAAGTAGGGATGATA+TGG 0.291256 4.2:-40079898 None:intergenic
GGAGGGGACTTGTAAATATA+TGG 0.291542 4.2:-40079232 None:intergenic
GGTGGTGGAGATGGGGATGG+TGG 0.294924 4.2:-40078632 None:intergenic
GGTGGAGACTTGTAAATATA+AGG 0.296214 4.2:-40079853 None:intergenic
GGTGGAGATTTGTAATAGTA+TGG 0.296797 4.2:-40079757 None:intergenic
GGTGAAGGAGAAGGAGGAGG+AGG 0.305536 4.2:-40079631 None:intergenic
GGAGGTGAGGGTGATGGTGG+AGG 0.309292 4.2:-40078917 None:intergenic
GGAGGTGAGGGTGATGGTGG+AGG 0.309292 4.2:-40079109 None:intergenic
GGTGGTGATGGAGAGGGTGG+TGG 0.310558 4.2:-40078869 None:intergenic
GGTGAAGGTGACGGTGGTGG+AGG 0.313418 4.2:-40079250 None:intergenic
GGTGGAGATGGGGATGGTGG+AGG 0.314818 4.2:-40078629 None:intergenic
GGTGAGGGAGATGGTGGTGG+TGG 0.316702 4.2:-40078530 None:intergenic
GGTGGTGGTGAGGGAGATGG+TGG 0.316989 4.2:-40078392 None:intergenic
GAAAAGATGGGAACCTCAAT+TGG 0.317670 4.2:+40078107 None:intergenic
TGAAGGAGAAGGAGGAGGAG+GGG 0.322345 4.2:-40079629 None:intergenic
GGAGGTGAGGGAGATGGTGG+TGG 0.325391 4.2:-40078533 None:intergenic
GGAGATGGGGATGGTGGAGG+TGG 0.325730 4.2:-40078626 None:intergenic
GGAGATGGGGATGGTGGAGG+TGG 0.325730 4.2:-40079202 None:intergenic
GGAGGAGGAGAGGGAGATGG+AGG 0.328571 4.2:-40079493 None:intergenic
GGAGATGGGGACGGTGGAGG+TGG 0.329322 4.2:-40079394 None:intergenic
GGTGAGGGTGATGGTGGAGG+AGG 0.334367 4.2:-40078914 None:intergenic
GGTGAGGGTGATGGTGGAGG+AGG 0.334367 4.2:-40079106 None:intergenic
GGTGAGGGAGATGGTGGAGG+GGG 0.334955 4.2:-40078386 None:intergenic
GGAGGAGGAGAGGGAGATGG+AGG 0.338690 4.2:-40078440 None:intergenic
GGAGGAGGTGAAGGGGATGG+TGG 0.339500 4.2:-40078776 None:intergenic
GGAGGAGACTTGTAGAGATA+TGG 0.340357 4.2:-40079088 None:intergenic
GGTGGAGATGGGGACGGTGG+AGG 0.341699 4.2:-40079397 None:intergenic
GGAGGAGGTGAAGGAGATGG+TGG 0.345266 4.2:-40079685 None:intergenic
GGTGAAGGTGATGGTGGTGG+TGG 0.345927 4.2:-40078674 None:intergenic
GGTGGTGGTGATGGAGAGGG+TGG 0.349427 4.2:-40078872 None:intergenic
GGGGATGGAGACGGTGGAGG+TGG 0.351465 4.2:-40079535 None:intergenic
GGTGGTGACTTGTAAATATA+TGG 0.352312 4.2:-40078752 None:intergenic
AGAGGGAGATGGAGGTGGTG+GGG 0.354975 4.2:-40078432 None:intergenic
GGCGGGGACTTGTAGTAATA+TGG 0.358208 4.2:-40078299 None:intergenic
GGTGATGGAGAGGGTGGTGG+TGG 0.359475 4.2:-40078866 None:intergenic
GGAGGAGAGGGAGATGGAGG+TGG 0.362660 4.2:-40078437 None:intergenic
AGTGGTGGAGATGGGGATGG+TGG 0.365590 4.2:-40079208 None:intergenic
CATATGGAGGTGGTGGAGAT+GGG 0.365905 4.2:-40078640 None:intergenic
GGAGGAGGTGAAGGGGATGG+AGG 0.367986 4.2:-40078584 None:intergenic
GGAGGAGGTGAAGGGGATGG+AGG 0.367986 4.2:-40078968 None:intergenic
GGAGGAGGTGAAGGGGATGG+AGG 0.367986 4.2:-40079160 None:intergenic
GGGGAAGGAGATGGAGGAGG+TGG 0.370064 4.2:-40078482 None:intergenic
GGTGAAGGGGATGGTGGAGG+AGG 0.371881 4.2:-40079583 None:intergenic
GGAGGAGAAGGTGATGGTGG+GGG 0.372577 4.2:-40079301 None:intergenic
ACATATGGAGGTGGTGGAGA+TGG 0.372845 4.2:-40078641 None:intergenic
ACATATGGAGGTGGTGGAGA+TGG 0.372845 4.2:-40079409 None:intergenic
TGAAGGTGACGGTGGTGGAG+GGG 0.373341 4.2:-40079248 None:intergenic
GGAGGTGAAGGGGATGGAGG+TGG 0.377858 4.2:-40078581 None:intergenic
GGAGGTGAAGGGGATGGAGG+TGG 0.377858 4.2:-40078965 None:intergenic
GGAGGTGAAGGGGATGGAGG+TGG 0.377858 4.2:-40079157 None:intergenic
GGTGATTGAGAGGGTGGTGG+TGG 0.378827 4.2:-40079058 None:intergenic
GGGGAGGAGAAGGTGATGGT+GGG 0.378837 4.2:-40079303 None:intergenic
GGTGGTGGAGATGGGGACGG+TGG 0.379914 4.2:-40079400 None:intergenic
GTGGTGAGGGAGATGGTGGA+GGG 0.379943 4.2:-40078388 None:intergenic
GGTGGTGAAGGGGATGGTGG+AGG 0.380594 4.2:-40079586 None:intergenic
GGAGGTGAAGGGGATGGTGG+AGG 0.382346 4.2:-40078773 None:intergenic
GGTGGGGATGGAGACGGTGG+AGG 0.383179 4.2:-40079538 None:intergenic
ACATATGGAGGAGGAGGTGA+AGG 0.385781 4.2:-40078593 None:intergenic
ACATATGGAGGAGGAGGTGA+AGG 0.385781 4.2:-40078785 None:intergenic
ACGTATGGAGGAGGAGGTGA+AGG 0.385781 4.2:-40078977 None:intergenic
ACATATGGAGGAGGAGGTGA+AGG 0.385781 4.2:-40079169 None:intergenic
GGTGGTGGGGATGGAGACGG+TGG 0.393190 4.2:-40079541 None:intergenic
TGGTGAGGGAGATGGTGGAG+GGG 0.393919 4.2:-40078387 None:intergenic
GTGAAGGAGAAGGAGGAGGA+GGG 0.399151 4.2:-40079630 None:intergenic
GGAGGGGAAGGAGATGGAGG+AGG 0.403106 4.2:-40078485 None:intergenic
GGTGGAGATGGGGATGGTGG+AGG 0.403585 4.2:-40079205 None:intergenic
GGTGGGGACTTGTATATATA+TGG 0.403823 4.2:-40079280 None:intergenic
GGTGAAGGGGATGGAGGTGG+TGG 0.406527 4.2:-40078578 None:intergenic
GGTGAAGGGGATGGTGGAGG+TGG 0.406527 4.2:-40078770 None:intergenic
GGTGAAGGGGATGGAGGTGG+TGG 0.406527 4.2:-40078962 None:intergenic
GGTGAAGGGGATGGAGGTGG+TGG 0.406527 4.2:-40079154 None:intergenic
GGGAGGAGAAGGTGATGGTG+GGG 0.409387 4.2:-40079302 None:intergenic
GGTGAAGGAGATGGAGGAGG+TGG 0.410384 4.2:-40079010 None:intergenic
GGAGGTGGTGAAGGCGAAGG+AGG 0.412597 4.2:-40079829 None:intergenic
GGTTGTGGATAGTTGTTGTT+TGG 0.414073 4.2:-40078227 None:intergenic
GGAGGAGAAGGAGATGGAGG+GGG 0.415499 4.2:-40078725 None:intergenic
ACATAGGGTGGAGGAGGTGA+AGG 0.416691 4.2:-40079694 None:intergenic
TGACTTGGTGGTGTTGGTTG+TGG 0.416992 4.2:-40078242 None:intergenic
ATGTATGGAGGTGGTGGGGA+TGG 0.419852 4.2:-40079550 None:intergenic
GGAGGAGACTTATAAATGTA+TGG 0.422270 4.2:-40079565 None:intergenic
GGTGGAGGAGGAGAGGGAGA+TGG 0.423829 4.2:-40079496 None:intergenic
GGAGGTGAAGGAGATGGAGG+AGG 0.426391 4.2:-40078821 None:intergenic
GGTGATGGAGATGGTGGAGG+TGG 0.427255 4.2:-40079871 None:intergenic
ACATATGGAGGAGGAGGTGA+AGG 0.427767 4.2:-40079361 None:intergenic
TTTGGTTGGCCACCGTAGTA+AGG 0.427953 4.2:-40078209 None:intergenic
GGTGGTGGTGATGGAGATGA+TGG 0.430767 4.2:-40078323 None:intergenic
TTGTAGACATATGGAGGTGG+TGG 0.431336 4.2:-40078647 None:intergenic
TTGTAGACATATGGAGGTGG+TGG 0.431336 4.2:-40079415 None:intergenic
GGAGGAGAGGGAGATGGAGG+AGG 0.431356 4.2:-40079490 None:intergenic
ACATAGGGAGGTGGTGGTGA+TGG 0.431913 4.2:-40078332 None:intergenic
AGTAATATGGTGGGTATTTG+TGG 0.434244 4.2:-40078355 None:intergenic
GGAGGAGGAGGAGAGGGAGA+TGG 0.435249 4.2:-40078443 None:intergenic
CATATGGAGGTGGTGGAGAT+GGG 0.438957 4.2:-40079408 None:intergenic
GGAGGAGGAGGTGAAGGAGA+TGG 0.439724 4.2:-40079355 None:intergenic
ACATATGGTGGAGGAGGTGA+TGG 0.440797 4.2:-40079790 None:intergenic
GGATGATATGGAGGAGGTGA+TGG 0.440797 4.2:-40079886 None:intergenic
GACTTGTATATATATGGTGG+AGG 0.441231 4.2:-40079274 None:intergenic
GGTGAAGGAGATGGAGGAGG+TGG 0.442744 4.2:-40078818 None:intergenic
GAGAGGGAGATGGAGGTGGT+GGG 0.443280 4.2:-40078433 None:intergenic
GGAGGAGACTTGTAGACATA+TGG 0.443592 4.2:-40078896 None:intergenic
TGTCCATGACTTGGTGGTGT+TGG 0.444796 4.2:-40078248 None:intergenic
ACATATGGAGGAGGAGGAGA+GGG 0.445616 4.2:-40078449 None:intergenic
GGTGAAGGAGATGGAGGTGG+TGG 0.446054 4.2:-40079346 None:intergenic
TATATGGAAGTGGTGGAGAT+GGG 0.446136 4.2:-40079216 None:intergenic
ACATATGGTGGAGGAGGTGA+AGG 0.446612 4.2:-40079025 None:intergenic
GGAGGAGGTGGTGAAGGCGA+AGG 0.448436 4.2:-40079832 None:intergenic
ATATATGGAAGTGGTGGAGA+TGG 0.450056 4.2:-40079217 None:intergenic
GGGAGGAGAAGGAGATGGAG+GGG 0.451220 4.2:-40078726 None:intergenic
GGCGGTGAAGGTGAAGGAGG+TGG 0.453794 4.2:-40079730 None:intergenic
GTGGATAGTTGTTGTTTGGT+TGG 0.455208 4.2:-40078223 None:intergenic
GGTGGTGACTTGTAAACATA+TGG 0.458367 4.2:-40078464 None:intergenic
GGTGGTGACTTGTAGACATA+TGG 0.458367 4.2:-40078800 None:intergenic
GGAGGTGAAGGAGATGGAGG+TGG 0.460807 4.2:-40079349 None:intergenic
TTATAAATGTATGGAGGTGG+TGG 0.463045 4.2:-40079556 None:intergenic
GGAGGAGGTGAAGGAGATGG+AGG 0.465034 4.2:-40079016 None:intergenic
GGAGGTGAAGGAGATGGAGG+AGG 0.465294 4.2:-40079013 None:intergenic
GGAGGAGGAGGTGAAGGGGA+TGG 0.466788 4.2:-40078587 None:intergenic
GGAGGAGGAGGTGAAGGGGA+TGG 0.466788 4.2:-40078971 None:intergenic
GGAGGAGGAGGTGAAGGGGA+TGG 0.466788 4.2:-40079163 None:intergenic
ACATATGGTGGAGGAGGAGA+GGG 0.466900 4.2:-40079502 None:intergenic
GGGGAGGAGAAGGAGATGGA+GGG 0.466963 4.2:-40078727 None:intergenic
GGAGGTGAAGGAGATGGTGG+GGG 0.467415 4.2:-40079682 None:intergenic
GGTGGAGGAGGTGAAGGAGA+TGG 0.467454 4.2:-40079019 None:intergenic
AACATATGGAGGAGGAGGAG+AGG 0.472004 4.2:-40078450 None:intergenic
GGAGGAGGTGAAGGAGATGG+AGG 0.473503 4.2:-40079352 None:intergenic
GGAGGTGATTTGAAATAATA+CGG 0.474931 4.2:-40078278 None:intergenic
GTGAAGGTGACGGTGGTGGA+GGG 0.475345 4.2:-40079249 None:intergenic
CGGCGGTGAGTTGTAGAAGT+AGG 0.475471 4.2:-40079908 None:intergenic
ACATATGGAGGTGGTGGTGA+TGG 0.476567 4.2:-40078881 None:intergenic
GGTGGTGAAGGCGAAGGAGG+TGG 0.476727 4.2:-40079826 None:intergenic
GGAGGAGGCGGTGAAGGTGA+AGG 0.476801 4.2:-40079736 None:intergenic
CGTATGGAGGAGGAGGTGAA+GGG 0.476910 4.2:-40078976 None:intergenic
GGAGGTGACTTATATACATA+TGG 0.478117 4.2:-40079472 None:intergenic
GGTGATGGAGAAGGCAGTGG+TGG 0.479771 4.2:-40079775 None:intergenic
GGTGGAGATATGTAAACATA+TGG 0.480835 4.2:-40079661 None:intergenic
GGCGGTGACTTATAGACATA+TGG 0.482302 4.2:-40079805 None:intergenic
GGGTATTTGTGGACATAGGG+AGG 0.483568 4.2:-40078344 None:intergenic
GGTGGAGATTTGTAGACATA+TGG 0.483762 4.2:-40078656 None:intergenic
GGTGGTGATTGAGAGGGTGG+TGG 0.485057 4.2:-40079061 None:intergenic
GGTGGAGATTTGTAGACATA+TGG 0.485681 4.2:-40079424 None:intergenic
CATATGGAGGAGGAGGTGAA+GGG 0.486420 4.2:-40078592 None:intergenic
CATATGGAGGAGGAGGTGAA+GGG 0.486420 4.2:-40078784 None:intergenic
CATATGGAGGAGGAGGTGAA+GGG 0.486420 4.2:-40079168 None:intergenic
AAAAGATGGGAACCTCAATT+GGG 0.488179 4.2:+40078108 None:intergenic
GGAGGCGGTGAAGGTGAAGG+AGG 0.489233 4.2:-40079733 None:intergenic
GGAGGTGATGGAGAAGGCAG+TGG 0.489972 4.2:-40079778 None:intergenic
TTGTGGACATAGGGAGGTGG+TGG 0.492476 4.2:-40078338 None:intergenic
GGTGGACTCTTATAGACATA+TGG 0.494389 4.2:-40078512 None:intergenic
GTGATGGAGATGATGGAGGC+GGG 0.494501 4.2:-40078316 None:intergenic
GGAGGTGGTGGTGAGGGAGA+TGG 0.495550 4.2:-40078395 None:intergenic
TGGTGGGTATTTGTGGACAT+AGG 0.497850 4.2:-40078348 None:intergenic
GGAGGAGGTGATGGAGATGG+TGG 0.500019 4.2:-40079877 None:intergenic
AGGAGGTGAAGGAGATGGTG+GGG 0.500079 4.2:-40079683 None:intergenic
GGCTGCTGTCCATGACTTGG+TGG 0.500332 4.2:-40078254 None:intergenic
GAGGAGGTGAAGGAGATGGT+GGG 0.500361 4.2:-40079684 None:intergenic
GGTGGTGACTTGTAGACATA+TGG 0.500664 4.2:-40078608 None:intergenic
GGTGGTGACTTGTAGACATA+TGG 0.500664 4.2:-40079184 None:intergenic
GGTGGTGACTTGTAGACATA+TGG 0.500664 4.2:-40079376 None:intergenic
GGAGGTGGTGGGGATGGAGA+CGG 0.501952 4.2:-40079544 None:intergenic
GGTGAAGGCGAAGGAGGTGG+CGG 0.502144 4.2:-40079823 None:intergenic
GGTGAAGGTGAAGGAGGTGG+TGG 0.502928 4.2:-40079727 None:intergenic
GGAGGTGATGGAGATGGTGG+AGG 0.504065 4.2:-40079874 None:intergenic
GGTGGTGGTGATTGAGAGGG+TGG 0.505474 4.2:-40079064 None:intergenic
GACTTATATACATATGGTGG+AGG 0.507340 4.2:-40079466 None:intergenic
ATATGGAGGAGGAGGTGAAG+GGG 0.508545 4.2:-40078591 None:intergenic
ATATGGAGGAGGAGGTGAAG+GGG 0.508545 4.2:-40078783 None:intergenic
ATATGGAGGAGGAGGTGAAG+GGG 0.508545 4.2:-40079167 None:intergenic
GGGGACTTATAGACATATGG+AGG 0.509138 4.2:-40079610 None:intergenic
AACATATGGTGGAGGAGGAG+AGG 0.509273 4.2:-40079503 None:intergenic
ATGTAAACATATGGAGGTGG+GGG 0.509563 4.2:-40079652 None:intergenic
GACTTATAAATGTATGGAGG+TGG 0.510638 4.2:-40079559 None:intergenic
TAGTATGGAGGAGGCGGTGA+AGG 0.512001 4.2:-40079742 None:intergenic
GGTGGGTATTTGTGGACATA+GGG 0.513368 4.2:-40078347 None:intergenic
GGTGGAGGAGGTGAAGGAGA+TGG 0.513591 4.2:-40079688 None:intergenic
TAGAAGTAGGGATGATATGG+AGG 0.514878 4.2:-40079895 None:intergenic
TGGAGGTGGTGGTGATGGAG+AGG 0.517134 4.2:-40078876 None:intergenic
GGTGGGGACTTGTACACATA+TGG 0.517298 4.2:-40078416 None:intergenic
GATATGTAAACATATGGAGG+TGG 0.519941 4.2:-40079655 None:intergenic
GCTTAATAGACGGGAGGCGG+CGG 0.523448 4.2:-40079925 None:intergenic
GTATGGAGGAGGAGGTGAAG+GGG 0.523552 4.2:-40078975 None:intergenic
GGTGATGGAGATGATGGAGG+CGG 0.524817 4.2:-40078317 None:intergenic
GGAGACTTGTAGAGATATGG+AGG 0.525921 4.2:-40079085 None:intergenic
TTGTAAACATATGGAGGAGG+AGG 0.526271 4.2:-40078455 None:intergenic
GACTTATATACATATGGTGG+AGG 0.527219 4.2:-40078698 None:intergenic
TATGTAAACATATGGAGGTG+GGG 0.528032 4.2:-40079653 None:intergenic
TGGAGGTGGTGGTGATTGAG+AGG 0.528155 4.2:-40079068 None:intergenic
GGAGGGGACTTATAGACATA+TGG 0.529139 4.2:-40079613 None:intergenic
GACTTGTAAATATATGGAAG+TGG 0.529750 4.2:-40079226 None:intergenic
GGAGGTGGTGGTGATGGAGA+GGG 0.530046 4.2:-40078875 None:intergenic
AAGTAGGGATGATATGGAGG+AGG 0.531483 4.2:-40079892 None:intergenic
GGTGGACTCTTATAGACATA+TGG 0.531675 4.2:-40078848 None:intergenic
GGTGGACTCTTATAGACATA+TGG 0.531675 4.2:-40079040 None:intergenic
GGTGGTGACTTATATACATA+TGG 0.532162 4.2:-40078704 None:intergenic
TATAAATGTATGGAGGTGGT+GGG 0.533886 4.2:-40079555 None:intergenic
GACTCTTATAGACATATGGC+GGG 0.535191 4.2:-40078508 None:intergenic
GGCGGTGAGTTGTAGAAGTA+GGG 0.537723 4.2:-40079907 None:intergenic
ATATGTAAACATATGGAGGT+GGG 0.541271 4.2:-40079654 None:intergenic
CTTATATACATATGGTGGAG+GGG 0.542015 4.2:-40078696 None:intergenic
CTTATATACATATGGTGGAG+GGG 0.542015 4.2:-40079464 None:intergenic
GGTGGTGACTTGTAGACGTA+TGG 0.542315 4.2:-40078992 None:intergenic
TGGTGGTGACTTATAGACAT+AGG 0.542858 4.2:-40079710 None:intergenic
GGAGGAGGAGGTGAAGGGGA+TGG 0.543427 4.2:-40078779 None:intergenic
TTGTAAACATATGGTGGAGG+AGG 0.544236 4.2:-40079508 None:intergenic
GGAGACTTGTAAATATAAGG+AGG 0.544355 4.2:-40079850 None:intergenic
TTGTAGACATATGGAGGAGG+AGG 0.545371 4.2:-40078599 None:intergenic
TTGTAGACATATGGAGGAGG+AGG 0.545371 4.2:-40078791 None:intergenic
TTGTAGACATATGGAGGAGG+AGG 0.545371 4.2:-40079175 None:intergenic
TTGTAGACATATGGAGGAGG+AGG 0.545371 4.2:-40079367 None:intergenic
TTGTATATATATGGTGGAGG+GGG 0.545825 4.2:-40079271 None:intergenic
GACTTGTAAATATAAGGAGG+AGG 0.546595 4.2:-40079847 None:intergenic
GGAGATATGTAAACATATGG+AGG 0.546714 4.2:-40079658 None:intergenic
GTGACTTGTAAATATATGGT+GGG 0.547559 4.2:-40078748 None:intergenic
GGTGGAGGAGGTGATGGAGA+AGG 0.548539 4.2:-40079784 None:intergenic
GGTGGTGACTTGTAAACATA+TGG 0.550685 4.2:-40078944 None:intergenic
GGTGGTGACTTGTAAACATA+TGG 0.550685 4.2:-40079517 None:intergenic
ATATAAGGAGGAGGTGGTGA+AGG 0.551872 4.2:-40079838 None:intergenic
TTATAGACATATGGTGGAGG+AGG 0.553590 4.2:-40079031 None:intergenic
GGAGGTGGTGGAGATGGGGA+TGG 0.554842 4.2:-40078635 None:intergenic
TTATAGACATATGGTGGAGG+AGG 0.555153 4.2:-40079796 None:intergenic
GAAGCTTAATAGACGGGAGG+CGG 0.556683 4.2:-40079928 None:intergenic
TTATATACATATGGTGGAGG+GGG 0.558358 4.2:-40078695 None:intergenic
TTATATACATATGGTGGAGG+GGG 0.558358 4.2:-40079463 None:intergenic
ACATATGGAGGTGGTGGTGA+GGG 0.558414 4.2:-40078401 None:intergenic
TTGTAAATATAAGGAGGAGG+TGG 0.561781 4.2:-40079844 None:intergenic
TTGTAATAGTATGGAGGAGG+CGG 0.562367 4.2:-40079748 None:intergenic
TTGTAGAGATATGGAGGTGG+TGG 0.562650 4.2:-40079079 None:intergenic
GGTGGTGACTTGTAGACATA+GGG 0.564757 4.2:-40078560 None:intergenic
GGTGGTGACTTGTAGACATA+GGG 0.564757 4.2:-40079136 None:intergenic
TATTTGTGGACATAGGGAGG+TGG 0.564760 4.2:-40078341 None:intergenic
TAGCCGGAAGCTTAATAGAC+GGG 0.565192 4.2:-40079934 None:intergenic
TGACTTGTAGACATAGGGTG+GGG 0.567096 4.2:-40078555 None:intergenic
TGACTTGTAGACATAGGGTG+GGG 0.567096 4.2:-40079131 None:intergenic
TTGTAGACGTATGGAGGAGG+AGG 0.567202 4.2:-40078983 None:intergenic
ATATGGAGGTGGTGGAGATG+GGG 0.568036 4.2:-40078639 None:intergenic
GGTGGTGATGGAGATGATGG+AGG 0.570621 4.2:-40078320 None:intergenic
GACTTATAGACATATGGAGG+GGG 0.570913 4.2:-40079607 None:intergenic
TTATAGACATAGGGTGGAGG+AGG 0.570972 4.2:-40079700 None:intergenic
GGAGGTGGTGGAGATGGGGA+CGG 0.571316 4.2:-40079403 None:intergenic
GGAGATTTGTAATAGTATGG+AGG 0.572419 4.2:-40079754 None:intergenic
ATATGGAAGTGGTGGAGATG+GGG 0.572737 4.2:-40079215 None:intergenic
GGTGGTGACTTATAGACATA+GGG 0.574727 4.2:-40079709 None:intergenic
CGACTTATACACATAGGGTG+GGG 0.574788 4.2:-40079323 None:intergenic
GGAAGTGGTGGAGATGGGGA+TGG 0.575740 4.2:-40079211 None:intergenic
CTCTTATAGACATATGGTGG+AGG 0.580199 4.2:-40079034 None:intergenic
GGAGGTTTGTAGTAATATGG+TGG 0.580365 4.2:-40078365 None:intergenic
CAACCAACACCACCAAGTCA+TGG 0.580908 4.2:+40078245 MS.gene056899:CDS
TGGGAACCTCAATTGGGTTG+AGG 0.581398 4.2:+40078114 MS.gene056899:CDS
GGTGACTTGTAGACATAGGG+TGG 0.583598 4.2:-40078557 None:intergenic
GGTGACTTGTAGACATAGGG+TGG 0.583598 4.2:-40079133 None:intergenic
GACTTGTAGACGTATGGAGG+AGG 0.584231 4.2:-40078986 None:intergenic
GGTGACTTATATACATATGG+TGG 0.585455 4.2:-40078701 None:intergenic
CACATATGGAGGTGGTGGTG+AGG 0.585537 4.2:-40078402 None:intergenic
GGTGGCTGCTGTCCATGACT+TGG 0.586242 4.2:-40078257 None:intergenic
CTTGTATATATATGGTGGAG+GGG 0.586309 4.2:-40079272 None:intergenic
GACTCTTATAGACATATGGT+GGG 0.589353 4.2:-40078844 None:intergenic
GGAGGTGGTGGTGATTGAGA+GGG 0.591023 4.2:-40079067 None:intergenic
TTGTAAATATATGGAAGTGG+TGG 0.592685 4.2:-40079223 None:intergenic
GACTTATAGACATAGGGTGG+AGG 0.592695 4.2:-40079703 None:intergenic
ATATGGAGGTGGTGGAGATG+GGG 0.593973 4.2:-40079407 None:intergenic
GACTTGTAAACATATGGAGG+AGG 0.594464 4.2:-40078458 None:intergenic
GGAGACTTATAAATGTATGG+AGG 0.594651 4.2:-40079562 None:intergenic
GTGACTTGTAAACATATGGT+GGG 0.597296 4.2:-40078940 None:intergenic
GGACTCTTATAGACATATGG+TGG 0.598794 4.2:-40078845 None:intergenic
TGGTGGTGACTTGTAGACAT+AGG 0.599080 4.2:-40078561 None:intergenic
TGGTGGTGACTTGTAGACAT+AGG 0.599080 4.2:-40079137 None:intergenic
GACTTATAGACATATGGTGG+AGG 0.601276 4.2:-40079799 None:intergenic
ACTTGTATATATATGGTGGA+GGG 0.602918 4.2:-40079273 None:intergenic
ATAAATGTATGGAGGTGGTG+GGG 0.602924 4.2:-40079554 None:intergenic
GATTTGTAATAGTATGGAGG+AGG 0.604753 4.2:-40079751 None:intergenic
ATAGCCGGAAGCTTAATAGA+CGG 0.606609 4.2:-40079935 None:intergenic
GGGGACTTGTATATATATGG+TGG 0.606669 4.2:-40079277 None:intergenic
GGTGACTTATATACATATGG+TGG 0.607776 4.2:-40079469 None:intergenic
GATGATTATAAGCCTTACTA+CGG 0.608797 4.2:+40078197 MS.gene056899:CDS
GACTTGTAGAGATATGGAGG+TGG 0.609935 4.2:-40079082 None:intergenic
TGGTGGCGACTTATACACAT+AGG 0.610886 4.2:-40079329 None:intergenic
CTCTTATAGACATATGGTGG+GGG 0.611472 4.2:-40078842 None:intergenic
GACTTGTAAATATATGGTGG+GGG 0.612374 4.2:-40078746 None:intergenic
GGTGACTTGTAAACATATGG+TGG 0.614447 4.2:-40078941 None:intergenic
GGAGATTTGTAGACATATGG+AGG 0.615097 4.2:-40079421 None:intergenic
GGCGACTTATACACATAGGG+TGG 0.615360 4.2:-40079325 None:intergenic
GTGACTTGTAGACATAGGGT+GGG 0.616123 4.2:-40078556 None:intergenic
GTGACTTGTAGACATAGGGT+GGG 0.616123 4.2:-40079132 None:intergenic
TATGGAGGAGGTGATGGAGA+TGG 0.616963 4.2:-40079880 None:intergenic
GGTGACTTGTAAATATATGG+TGG 0.618003 4.2:-40078749 None:intergenic
GACTTGTAGACATATGGAGG+AGG 0.618035 4.2:-40078602 None:intergenic
GACTTGTAGACATATGGAGG+AGG 0.618035 4.2:-40078794 None:intergenic
GACTTGTAGACATATGGAGG+AGG 0.618035 4.2:-40079178 None:intergenic
GACTTGTAGACATATGGAGG+AGG 0.618035 4.2:-40079370 None:intergenic
TTGTAGACATATGGAGGTGG+TGG 0.619787 4.2:-40078887 None:intergenic
GAGGTTTGTAGTAATATGGT+GGG 0.621219 4.2:-40078364 None:intergenic
GACTTGTACACATATGGAGG+TGG 0.621373 4.2:-40078410 None:intergenic
CTCTTATAGACATATGGCGG+GGG 0.624877 4.2:-40078506 None:intergenic
GACTTATACACATAGGGTGG+GGG 0.625517 4.2:-40079322 None:intergenic
TGACTTGTAAATATATGGTG+GGG 0.626142 4.2:-40078747 None:intergenic
TTGTACACATATGGAGGTGG+TGG 0.626260 4.2:-40078407 None:intergenic
TGATGGAGATGATGGAGGCG+GGG 0.627645 4.2:-40078315 None:intergenic
GACTTGTAGACATATGGAGG+TGG 0.631827 4.2:-40078890 None:intergenic
GACTTGTAGACATAGGGTGG+GGG 0.632061 4.2:-40078554 None:intergenic
GACTTGTAGACATAGGGTGG+GGG 0.632061 4.2:-40079130 None:intergenic
GACTTGTAAACATATGGTGG+GGG 0.636564 4.2:-40078938 None:intergenic
CAAGTGCCTCAACCCAATTG+AGG 0.637677 4.2:-40078120 None:intergenic
GGACTCTTATAGACATATGG+CGG 0.638803 4.2:-40078509 None:intergenic
ACTTATATACATATGGTGGA+GGG 0.638845 4.2:-40078697 None:intergenic
ACTTATATACATATGGTGGA+GGG 0.638845 4.2:-40079465 None:intergenic
GCGACTTATACACATAGGGT+GGG 0.639267 4.2:-40079324 None:intergenic
ACTCTTATAGACATATGGTG+GGG 0.639633 4.2:-40078843 None:intergenic
GGACTCTTATAGACATATGG+TGG 0.640164 4.2:-40079037 None:intergenic
GCTATTGCGTAGATGAGTTG+AGG 0.641376 4.2:-40078143 None:intergenic
TGACTTGTAAACATATGGTG+GGG 0.645036 4.2:-40078939 None:intergenic
GGTGACTTGTAGACGTATGG+AGG 0.645452 4.2:-40078989 None:intergenic
ACTCTTATAGACATATGGCG+GGG 0.649556 4.2:-40078507 None:intergenic
GGTGGCGACTTATACACATA+GGG 0.651866 4.2:-40079328 None:intergenic
GACTTGTAAACATATGGTGG+AGG 0.655706 4.2:-40079511 None:intergenic
GGAGACTTGTAGACATATGG+AGG 0.661316 4.2:-40078893 None:intergenic
GGTGACTTGTAAACATATGG+AGG 0.662771 4.2:-40078461 None:intergenic
GGACTTATAGACATATGGAG+GGG 0.666867 4.2:-40079608 None:intergenic
GGTGACTTGTAGACATATGG+AGG 0.667802 4.2:-40078605 None:intergenic
GGTGACTTGTAGACATATGG+AGG 0.667802 4.2:-40078797 None:intergenic
GGTGACTTGTAGACATATGG+AGG 0.667802 4.2:-40079181 None:intergenic
GGTGACTTGTAGACATATGG+AGG 0.667802 4.2:-40079373 None:intergenic
GGTGACTTATAGACATAGGG+TGG 0.668915 4.2:-40079706 None:intergenic
GATTATAAGCCTTACTACGG+TGG 0.671792 4.2:+40078200 MS.gene056899:CDS
GGTGACTTGTAAACATATGG+TGG 0.672460 4.2:-40079514 None:intergenic
GGGACTTATAGACATATGGA+GGG 0.674944 4.2:-40079609 None:intergenic
GGGGACTTGTAGTAATATGG+AGG 0.679254 4.2:-40078296 None:intergenic
GGAGATTTGTAGACATATGG+AGG 0.679400 4.2:-40078653 None:intergenic
GATTTGTAGACATATGGAGG+TGG 0.695234 4.2:-40078650 None:intergenic
GATTTGTAGACATATGGAGG+TGG 0.695234 4.2:-40079418 None:intergenic
GGTGACTTATAGACATATGG+TGG 0.695241 4.2:-40079802 None:intergenic
CCGGAAGCTTAATAGACGGG+AGG 0.703393 4.2:-40079931 None:intergenic
GGGGACTTGTACACATATGG+AGG 0.711081 4.2:-40078413 None:intergenic
GGTGATTTGAAATAATACGG+TGG 0.783379 4.2:-40078275 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
ATATGTAAACATATGGAGGT+GGG - chr4.2:40079657-40079676 None:intergenic 30.0%
GACTTGTAAATATATGGAAG+TGG - chr4.2:40079229-40079248 None:intergenic 30.0%
GATGATTATAAGCCTTACTA+CGG + chr4.2:40078197-40078216 MS.gene056899:CDS 30.0%
TTGTAAATATATGGAAGTGG+TGG - chr4.2:40079226-40079245 None:intergenic 30.0%
! ACTTATATACATATGGTGGA+GGG - chr4.2:40078700-40078719 None:intergenic 30.0%
! ACTTGTATATATATGGTGGA+GGG - chr4.2:40079276-40079295 None:intergenic 30.0%
! GGAGGTGATTTGAAATAATA+CGG - chr4.2:40078281-40078300 None:intergenic 30.0%
! GTGACTTGTAAATATATGGT+GGG - chr4.2:40078751-40078770 None:intergenic 30.0%
! TGACTTGTAAATATATGGTG+GGG - chr4.2:40078750-40078769 None:intergenic 30.0%
ACTCTTATAGACATATGGTG+GGG - chr4.2:40078846-40078865 None:intergenic 35.0%
GACTCTTATAGACATATGGT+GGG - chr4.2:40078847-40078866 None:intergenic 35.0%
GACTTATAAATGTATGGAGG+TGG - chr4.2:40079562-40079581 None:intergenic 35.0%
GACTTATATACATATGGTGG+AGG - chr4.2:40078701-40078720 None:intergenic 35.0%
GACTTGTAAATATAAGGAGG+AGG - chr4.2:40079850-40079869 None:intergenic 35.0%
GACTTGTAAATATATGGTGG+GGG - chr4.2:40078749-40078768 None:intergenic 35.0%
GACTTGTATATATATGGTGG+AGG - chr4.2:40079277-40079296 None:intergenic 35.0%
GAGGTTTGTAGTAATATGGT+GGG - chr4.2:40078367-40078386 None:intergenic 35.0%
GATATGTAAACATATGGAGG+TGG - chr4.2:40079658-40079677 None:intergenic 35.0%
GATTTGTAATAGTATGGAGG+AGG - chr4.2:40079754-40079773 None:intergenic 35.0%
GGAGACTTATAAATGTATGG+AGG - chr4.2:40079565-40079584 None:intergenic 35.0%
GGAGACTTGTAAATATAAGG+AGG - chr4.2:40079853-40079872 None:intergenic 35.0%
GGAGATATGTAAACATATGG+AGG - chr4.2:40079661-40079680 None:intergenic 35.0%
GGAGATTTGTAATAGTATGG+AGG - chr4.2:40079757-40079776 None:intergenic 35.0%
GGAGGAGACTTATAAATGTA+TGG - chr4.2:40079568-40079587 None:intergenic 35.0%
GGAGGTGACTTATATACATA+TGG - chr4.2:40079475-40079494 None:intergenic 35.0%
GGTGACTTATATACATATGG+TGG - chr4.2:40078704-40078723 None:intergenic 35.0%
GGTGGAGACTTGTAAATATA+AGG - chr4.2:40079856-40079875 None:intergenic 35.0%
GGTGGAGATATGTAAACATA+TGG - chr4.2:40079664-40079683 None:intergenic 35.0%
GGTGGAGATTTGTAATAGTA+TGG - chr4.2:40079760-40079779 None:intergenic 35.0%
GGTGGTGACTTATATACATA+TGG - chr4.2:40078707-40078726 None:intergenic 35.0%
TATAAATGTATGGAGGTGGT+GGG - chr4.2:40079558-40079577 None:intergenic 35.0%
TATGTAAACATATGGAGGTG+GGG - chr4.2:40079656-40079675 None:intergenic 35.0%
TTATAAATGTATGGAGGTGG+TGG - chr4.2:40079559-40079578 None:intergenic 35.0%
TTGTAAATATAAGGAGGAGG+TGG - chr4.2:40079847-40079866 None:intergenic 35.0%
TTGTAGAAGTAGGGATGATA+TGG - chr4.2:40079901-40079920 None:intergenic 35.0%
! CTTATATACATATGGTGGAG+GGG - chr4.2:40078699-40078718 None:intergenic 35.0%
! CTTGTATATATATGGTGGAG+GGG - chr4.2:40079275-40079294 None:intergenic 35.0%
! GGTGACTTGTAAATATATGG+TGG - chr4.2:40078752-40078771 None:intergenic 35.0%
! GGTGATTTGAAATAATACGG+TGG - chr4.2:40078278-40078297 None:intergenic 35.0%
! GGTGGTGACTTGTAAATATA+TGG - chr4.2:40078755-40078774 None:intergenic 35.0%
! GTGACTTGTAAACATATGGT+GGG - chr4.2:40078943-40078962 None:intergenic 35.0%
! TGACTTGTAAACATATGGTG+GGG - chr4.2:40078942-40078961 None:intergenic 35.0%
! TTATATACATATGGTGGAGG+GGG - chr4.2:40078698-40078717 None:intergenic 35.0%
! TTGTATATATATGGTGGAGG+GGG - chr4.2:40079274-40079293 None:intergenic 35.0%
!! AGTAATATGGTGGGTATTTG+TGG - chr4.2:40078358-40078377 None:intergenic 35.0%
ACTCTTATAGACATATGGCG+GGG - chr4.2:40078510-40078529 None:intergenic 40.0%
ATAAATGTATGGAGGTGGTG+GGG - chr4.2:40079557-40079576 None:intergenic 40.0%
ATGTAAACATATGGAGGTGG+GGG - chr4.2:40079655-40079674 None:intergenic 40.0%
CTCTTATAGACATATGGTGG+AGG - chr4.2:40078845-40078864 None:intergenic 40.0%
CTCTTATAGACATATGGTGG+GGG - chr4.2:40078845-40078864 None:intergenic 40.0%
GACTCTTATAGACATATGGC+GGG - chr4.2:40078511-40078530 None:intergenic 40.0%
GACTTATAGACATATGGAGG+GGG - chr4.2:40079610-40079629 None:intergenic 40.0%
GACTTATAGACATATGGTGG+AGG - chr4.2:40079802-40079821 None:intergenic 40.0%
GACTTGTAAACATATGGAGG+AGG - chr4.2:40078461-40078480 None:intergenic 40.0%
GACTTGTAAACATATGGTGG+AGG - chr4.2:40078941-40078960 None:intergenic 40.0%
GACTTGTAAACATATGGTGG+GGG - chr4.2:40078941-40078960 None:intergenic 40.0%
GATTATAAGCCTTACTACGG+TGG + chr4.2:40078200-40078219 MS.gene056899:CDS 40.0%
GATTTGTAGACATATGGAGG+TGG - chr4.2:40078653-40078672 None:intergenic 40.0%
GGACTCTTATAGACATATGG+CGG - chr4.2:40078512-40078531 None:intergenic 40.0%
GGACTCTTATAGACATATGG+TGG - chr4.2:40078512-40078531 None:intergenic 40.0%
GGACTTATAGACATATGGAG+GGG - chr4.2:40079611-40079630 None:intergenic 40.0%
GGAGATTTGTAGACATATGG+AGG - chr4.2:40078656-40078675 None:intergenic 40.0%
GGAGGGGACTTGTAAATATA+TGG - chr4.2:40079235-40079254 None:intergenic 40.0%
GGAGGTTTGTAGTAATATGG+TGG - chr4.2:40078368-40078387 None:intergenic 40.0%
GGGACTTATAGACATATGGA+GGG - chr4.2:40079612-40079631 None:intergenic 40.0%
GGGGACTTGTATATATATGG+TGG - chr4.2:40079280-40079299 None:intergenic 40.0%
GGTGACTTATAGACATATGG+TGG - chr4.2:40079805-40079824 None:intergenic 40.0%
GGTGGAGATTTGTAGACATA+TGG - chr4.2:40078659-40078678 None:intergenic 40.0%
GGTGGGGACTTGTATATATA+TGG - chr4.2:40079283-40079302 None:intergenic 40.0%
GGTGGTGACTTATAGACATA+GGG - chr4.2:40079712-40079731 None:intergenic 40.0%
TAGAAGTAGGGATGATATGG+AGG - chr4.2:40079898-40079917 None:intergenic 40.0%
TTGTAAACATATGGAGGAGG+AGG - chr4.2:40078458-40078477 None:intergenic 40.0%
TTGTAATAGTATGGAGGAGG+CGG - chr4.2:40079751-40079770 None:intergenic 40.0%
! ATATATGGAAGTGGTGGAGA+TGG - chr4.2:40079220-40079239 None:intergenic 40.0%
! GGTGACTTGTAAACATATGG+AGG - chr4.2:40078464-40078483 None:intergenic 40.0%
! GGTGACTTGTAAACATATGG+TGG - chr4.2:40078464-40078483 None:intergenic 40.0%
! GGTGGACTCTTATAGACATA+TGG - chr4.2:40078515-40078534 None:intergenic 40.0%
! GGTGGTGACTTGTAAACATA+TGG - chr4.2:40078467-40078486 None:intergenic 40.0%
! GGTTGTGGATAGTTGTTGTT+TGG - chr4.2:40078230-40078249 None:intergenic 40.0%
! TATATGGAAGTGGTGGAGAT+GGG - chr4.2:40079219-40079238 None:intergenic 40.0%
! TGGTGGTGACTTATAGACAT+AGG - chr4.2:40079713-40079732 None:intergenic 40.0%
! TTATAGACATATGGTGGAGG+AGG - chr4.2:40079034-40079053 None:intergenic 40.0%
! TTGTAAACATATGGTGGAGG+AGG - chr4.2:40079511-40079530 None:intergenic 40.0%
! TTGTAAATATATGGTGGGGG+AGG - chr4.2:40078746-40078765 None:intergenic 40.0%
!! GTGGATAGTTGTTGTTTGGT+TGG - chr4.2:40078226-40078245 None:intergenic 40.0%
AAGTAGGGATGATATGGAGG+AGG - chr4.2:40079895-40079914 None:intergenic 45.0%
ATATAAGGAGGAGGTGGTGA+AGG - chr4.2:40079841-40079860 None:intergenic 45.0%
CGACTTATACACATAGGGTG+GGG - chr4.2:40079326-40079345 None:intergenic 45.0%
CTCTTATAGACATATGGCGG+GGG - chr4.2:40078509-40078528 None:intergenic 45.0%
GACTTATACACATAGGGTGG+GGG - chr4.2:40079325-40079344 None:intergenic 45.0%
GACTTATAGACATAGGGTGG+AGG - chr4.2:40079706-40079725 None:intergenic 45.0%
GACTTGTACACATATGGAGG+TGG - chr4.2:40078413-40078432 None:intergenic 45.0%
GACTTGTAGACATATGGAGG+AGG - chr4.2:40078605-40078624 None:intergenic 45.0%
GACTTGTAGACATATGGAGG+TGG - chr4.2:40078605-40078624 None:intergenic 45.0%
GACTTGTAGAGATATGGAGG+TGG - chr4.2:40079085-40079104 None:intergenic 45.0%
GCGACTTATACACATAGGGT+GGG - chr4.2:40079327-40079346 None:intergenic 45.0%
GCTATTGCGTAGATGAGTTG+AGG - chr4.2:40078146-40078165 None:intergenic 45.0%
GGAGACTTGTAGACATATGG+AGG - chr4.2:40078896-40078915 None:intergenic 45.0%
GGAGACTTGTAGAGATATGG+AGG - chr4.2:40079088-40079107 None:intergenic 45.0%
GGAGGAGACTTGTAGACATA+TGG - chr4.2:40078899-40078918 None:intergenic 45.0%
GGAGGAGACTTGTAGAGATA+TGG - chr4.2:40079091-40079110 None:intergenic 45.0%
GGAGGGGACTTATAGACATA+TGG - chr4.2:40079616-40079635 None:intergenic 45.0%
GGCGGTGACTTATAGACATA+TGG - chr4.2:40079808-40079827 None:intergenic 45.0%
GGGGACTTATAGACATATGG+AGG - chr4.2:40079613-40079632 None:intergenic 45.0%
GGGGACTTGTAGTAATATGG+AGG - chr4.2:40078299-40078318 None:intergenic 45.0%
GGGGGAGGTTTGTAGTAATA+TGG - chr4.2:40078371-40078390 None:intergenic 45.0%
GGTGACTTATAGACATAGGG+TGG - chr4.2:40079709-40079728 None:intergenic 45.0%
GGTGGCGACTTATACACATA+GGG - chr4.2:40079331-40079350 None:intergenic 45.0%
GGTGGGTATTTGTGGACATA+GGG - chr4.2:40078350-40078369 None:intergenic 45.0%
TATTTGTGGACATAGGGAGG+TGG - chr4.2:40078344-40078363 None:intergenic 45.0%
TTATAGACATAGGGTGGAGG+AGG - chr4.2:40079703-40079722 None:intergenic 45.0%
TTATAGACATATGGAGGGGG+TGG - chr4.2:40079607-40079626 None:intergenic 45.0%
TTGTACACATATGGAGGTGG+TGG - chr4.2:40078410-40078429 None:intergenic 45.0%
TTGTAGACATATGGAGGAGG+AGG - chr4.2:40078602-40078621 None:intergenic 45.0%
TTGTAGACATATGGAGGTGG+TGG - chr4.2:40078650-40078669 None:intergenic 45.0%
TTGTAGAGATATGGAGGTGG+TGG - chr4.2:40079082-40079101 None:intergenic 45.0%
! ATATGGAAGTGGTGGAGATG+GGG - chr4.2:40079218-40079237 None:intergenic 45.0%
! GGTGACTTGTAGACATATGG+AGG - chr4.2:40078608-40078627 None:intergenic 45.0%
! GGTGGTGACTTGTAGACATA+GGG - chr4.2:40078563-40078582 None:intergenic 45.0%
! GGTGGTGACTTGTAGACATA+TGG - chr4.2:40078563-40078582 None:intergenic 45.0%
! GTGACTTGTAGACATAGGGT+GGG - chr4.2:40078559-40078578 None:intergenic 45.0%
! TGACTTGTAGACATAGGGTG+GGG - chr4.2:40078558-40078577 None:intergenic 45.0%
! TGGTGGCGACTTATACACAT+AGG - chr4.2:40079332-40079351 None:intergenic 45.0%
! TGGTGGGTATTTGTGGACAT+AGG - chr4.2:40078351-40078370 None:intergenic 45.0%
! TGGTGGTGACTTGTAGACAT+AGG - chr4.2:40078564-40078583 None:intergenic 45.0%
! TTATAGACATATGGTGGGGG+AGG - chr4.2:40078842-40078861 None:intergenic 45.0%
! TTGTAAACATATGGTGGGGG+AGG - chr4.2:40078938-40078957 None:intergenic 45.0%
AACATATGGAGGAGGAGGAG+AGG - chr4.2:40078453-40078472 None:intergenic 50.0%
ACATATGGAGGAGGAGGAGA+GGG - chr4.2:40078452-40078471 None:intergenic 50.0%
ACATATGGAGGAGGAGGTGA+AGG - chr4.2:40078596-40078615 None:intergenic 50.0%
ATATGGAGGAGGAGGTGAAG+GGG - chr4.2:40078594-40078613 None:intergenic 50.0%
CAACCAACACCACCAAGTCA+TGG + chr4.2:40078245-40078264 MS.gene056899:CDS 50.0%
CAAGTGCCTCAACCCAATTG+AGG - chr4.2:40078123-40078142 None:intergenic 50.0%
CATATGGAGGAGGAGGTGAA+GGG - chr4.2:40078595-40078614 None:intergenic 50.0%
GACTTGTAGACATAGGGTGG+GGG - chr4.2:40078557-40078576 None:intergenic 50.0%
GACTTGTAGACGTATGGAGG+AGG - chr4.2:40078989-40079008 None:intergenic 50.0%
GGATGATATGGAGGAGGTGA+TGG - chr4.2:40079889-40079908 None:intergenic 50.0%
GGCGACTTATACACATAGGG+TGG - chr4.2:40079328-40079347 None:intergenic 50.0%
GGCGGGGACTTGTAGTAATA+TGG - chr4.2:40078302-40078321 None:intergenic 50.0%
GGCGGTGAGTTGTAGAAGTA+GGG - chr4.2:40079910-40079929 None:intergenic 50.0%
GGGGACTTGTACACATATGG+AGG - chr4.2:40078416-40078435 None:intergenic 50.0%
GGGTATTTGTGGACATAGGG+AGG - chr4.2:40078347-40078366 None:intergenic 50.0%
GGTGGGGACTTGTACACATA+TGG - chr4.2:40078419-40078438 None:intergenic 50.0%
TTATACACATAGGGTGGGGG+AGG - chr4.2:40079322-40079341 None:intergenic 50.0%
TTGTAGACGTATGGAGGAGG+AGG - chr4.2:40078986-40079005 None:intergenic 50.0%
! AACATATGGTGGAGGAGGAG+AGG - chr4.2:40079506-40079525 None:intergenic 50.0%
! ACATATGGAGGTGGTGGTGA+GGG - chr4.2:40078404-40078423 None:intergenic 50.0%
! ACATATGGAGGTGGTGGTGA+TGG - chr4.2:40078404-40078423 None:intergenic 50.0%
! ACATATGGTGGAGGAGGAGA+GGG - chr4.2:40079505-40079524 None:intergenic 50.0%
! ACATATGGTGGAGGAGGTGA+AGG - chr4.2:40079028-40079047 None:intergenic 50.0%
! ACATATGGTGGAGGAGGTGA+TGG - chr4.2:40079028-40079047 None:intergenic 50.0%
! ATATATGGTGGAGGGGGTGA+AGG - chr4.2:40079268-40079287 None:intergenic 50.0%
! ATATATGGTGGGGGAGGAGA+AGG - chr4.2:40078740-40078759 None:intergenic 50.0%
! GGTGACTTGTAGACATAGGG+TGG - chr4.2:40078560-40078579 None:intergenic 50.0%
! GGTGACTTGTAGACGTATGG+AGG - chr4.2:40078992-40079011 None:intergenic 50.0%
! GGTGGTGACTTGTAGACGTA+TGG - chr4.2:40078995-40079014 None:intergenic 50.0%
! TATAGACATATGGCGGGGGA+GGG - chr4.2:40078505-40078524 None:intergenic 50.0%
! TGGGAACCTCAATTGGGTTG+AGG + chr4.2:40078114-40078133 MS.gene056899:CDS 50.0%
! TTATAGACATATGGCGGGGG+AGG - chr4.2:40078506-40078525 None:intergenic 50.0%
! TTTGGTTGGCCACCGTAGTA+AGG - chr4.2:40078212-40078231 None:intergenic 50.0%
!! ACATATGGAGGTGGTGGAGA+TGG - chr4.2:40078644-40078663 None:intergenic 50.0%
!! ATATGGAGGTGGTGGAGATG+GGG - chr4.2:40078642-40078661 None:intergenic 50.0%
!! CATATGGAGGTGGTGGAGAT+GGG - chr4.2:40078643-40078662 None:intergenic 50.0%
!! TATGGAGGAGGTGATGGAGA+TGG - chr4.2:40079883-40079902 None:intergenic 50.0%
!! TGACTTGGTGGTGTTGGTTG+TGG - chr4.2:40078245-40078264 None:intergenic 50.0%
!! TGTCCATGACTTGGTGGTGT+TGG - chr4.2:40078251-40078270 None:intergenic 50.0%
ACATAGGGTGGAGGAGGTGA+AGG - chr4.2:40079697-40079716 None:intergenic 55.0%
ACATATGGAGGGGGTGGTGA+AGG - chr4.2:40079601-40079620 None:intergenic 55.0%
ACATATGGAGGTGGGGGTGA+AGG - chr4.2:40079649-40079668 None:intergenic 55.0%
ACGTATGGAGGAGGAGGTGA+AGG - chr4.2:40078980-40078999 None:intergenic 55.0%
AGGAGGTGAAGGAGATGGTG+GGG - chr4.2:40079686-40079705 None:intergenic 55.0%
ATATGGAGGGGGTGGTGAAG+GGG - chr4.2:40079599-40079618 None:intergenic 55.0%
CATATGGAGGGGGTGGTGAA+GGG - chr4.2:40079600-40079619 None:intergenic 55.0%
CGGCGGTGAGTTGTAGAAGT+AGG - chr4.2:40079911-40079930 None:intergenic 55.0%
CGTATGGAGGAGGAGGTGAA+GGG - chr4.2:40078979-40078998 None:intergenic 55.0%
GAGGAGGTGAAGGAGATGGT+GGG - chr4.2:40079687-40079706 None:intergenic 55.0%
GTATGGAGGAGGAGGTGAAG+GGG - chr4.2:40078978-40078997 None:intergenic 55.0%
GTGAAGGAGAAGGAGGAGGA+GGG - chr4.2:40079633-40079652 None:intergenic 55.0%
TAGTATGGAGGAGGCGGTGA+AGG - chr4.2:40079745-40079764 None:intergenic 55.0%
TGAAGGAGAAGGAGGAGGAG+GGG - chr4.2:40079632-40079651 None:intergenic 55.0%
TTGTAGACATAGGGTGGGGG+AGG - chr4.2:40078554-40078573 None:intergenic 55.0%
TTGTGGACATAGGGAGGTGG+TGG - chr4.2:40078341-40078360 None:intergenic 55.0%
! AACATATGGTGGGGGAGGTG+AGG - chr4.2:40078933-40078952 None:intergenic 55.0%
! ACATAGGGAGGTGGTGGTGA+TGG - chr4.2:40078335-40078354 None:intergenic 55.0%
! ACATATGGTGGAGGGGGTGA+AGG - chr4.2:40078692-40078711 None:intergenic 55.0%
! ACATATGGTGGGGGAGGTGA+AGG - chr4.2:40078836-40078855 None:intergenic 55.0%
! ACATATGGTGGGGGAGGTGA+GGG - chr4.2:40078836-40078855 None:intergenic 55.0%
! ATAGACATATGGCGGGGGAG+GGG - chr4.2:40078504-40078523 None:intergenic 55.0%
! CACATATGGAGGTGGTGGTG+AGG - chr4.2:40078405-40078424 None:intergenic 55.0%
! GGAGGTGGTGGTGATTGAGA+GGG - chr4.2:40079070-40079089 None:intergenic 55.0%
! TGGAGGTGGTGGTGATTGAG+AGG - chr4.2:40079071-40079090 None:intergenic 55.0%
!! ATGTATGGAGGTGGTGGGGA+TGG - chr4.2:40079553-40079572 None:intergenic 55.0%
!! GGTGATGGAGATGATGGAGG+CGG - chr4.2:40078320-40078339 None:intergenic 55.0%
!! GGTGGTGATGGAGATGATGG+AGG - chr4.2:40078323-40078342 None:intergenic 55.0%
!! GGTGGTGGTGATGGAGATGA+TGG - chr4.2:40078326-40078345 None:intergenic 55.0%
!! GTGATGGAGATGATGGAGGC+GGG - chr4.2:40078319-40078338 None:intergenic 55.0%
!! TGATGGAGATGATGGAGGCG+GGG - chr4.2:40078318-40078337 None:intergenic 55.0%
ACATAGGGTGGGGGAGGAGA+AGG - chr4.2:40079316-40079335 None:intergenic 60.0%
ACATAGGGTGGGGGAGGTGA+GGG - chr4.2:40078548-40078567 None:intergenic 60.0%
AGAGGGAGATGGAGGTGGTG+GGG - chr4.2:40078435-40078454 None:intergenic 60.0%
GAGAGGGAGATGGAGGTGGT+GGG - chr4.2:40078436-40078455 None:intergenic 60.0%
GGAGGAGAAGGAGATGGAGG+GGG - chr4.2:40078728-40078747 None:intergenic 60.0%
GGAGGAGGAGGTGAAGGAGA+TGG - chr4.2:40079358-40079377 None:intergenic 60.0%
GGAGGAGGTGAAGGAGATGG+AGG - chr4.2:40079019-40079038 None:intergenic 60.0%
GGAGGAGGTGAAGGAGATGG+TGG - chr4.2:40079019-40079038 None:intergenic 60.0%
GGAGGTGAAGGAGATGGAGG+AGG - chr4.2:40078824-40078843 None:intergenic 60.0%
GGAGGTGAAGGAGATGGAGG+TGG - chr4.2:40078824-40078843 None:intergenic 60.0%
GGGAGGAGAAGGAGATGGAG+GGG - chr4.2:40078729-40078748 None:intergenic 60.0%
GGGGAGGAGAAGGAGATGGA+GGG - chr4.2:40078730-40078749 None:intergenic 60.0%
GGTGAAGGAGAAGGAGGAGG+AGG - chr4.2:40079634-40079653 None:intergenic 60.0%
GGTGAAGGAGATGGAGGAGG+TGG - chr4.2:40078821-40078840 None:intergenic 60.0%
GGTGAAGGAGATGGAGGTGG+TGG - chr4.2:40079349-40079368 None:intergenic 60.0%
GGTGAAGGTGAAGGAGGTGG+TGG - chr4.2:40079730-40079749 None:intergenic 60.0%
GGTGGAGGAGGTGAAGGAGA+TGG - chr4.2:40079022-40079041 None:intergenic 60.0%
GGTGGCTGCTGTCCATGACT+TGG - chr4.2:40078260-40078279 None:intergenic 60.0%
GGTGGTGATTGAGAGGGTGG+TGG - chr4.2:40079064-40079083 None:intergenic 60.0%
! AGGGGGTGAAGGTGATGGTG+GGG - chr4.2:40078681-40078700 None:intergenic 60.0%
! AGTGGTGGAGATGGGGATGG+TGG - chr4.2:40079211-40079230 None:intergenic 60.0%
! GAGGGGGTGAAGGTGATGGT+GGG - chr4.2:40078682-40078701 None:intergenic 60.0%
! GGAAGTGGTGGAGATGGGGA+TGG - chr4.2:40079214-40079233 None:intergenic 60.0%
! GGAGGTGAAGGAGATGGTGG+GGG - chr4.2:40079685-40079704 None:intergenic 60.0%
! GGCTGCTGTCCATGACTTGG+TGG - chr4.2:40078257-40078276 None:intergenic 60.0%
! GGGAGGAGAAGGTGATGGTG+GGG - chr4.2:40079305-40079324 None:intergenic 60.0%
! GGGGAGGAGAAGGTGATGGT+GGG - chr4.2:40079306-40079325 None:intergenic 60.0%
! GGTGATTGAGAGGGTGGTGG+TGG - chr4.2:40079061-40079080 None:intergenic 60.0%
! GGTGGTGGTGATTGAGAGGG+TGG - chr4.2:40079067-40079086 None:intergenic 60.0%
!! AGAAGGTGATGGTGGGGGTG+GGG - chr4.2:40079299-40079318 None:intergenic 60.0%
!! GAGAAGGTGATGGTGGGGGT+GGG - chr4.2:40079300-40079319 None:intergenic 60.0%
!! GGAGGAGAAGGTGATGGTGG+GGG - chr4.2:40079304-40079323 None:intergenic 60.0%
!! GGAGGAGGTGATGGAGATGG+TGG - chr4.2:40079880-40079899 None:intergenic 60.0%
!! GGAGGTGATGGAGAAGGCAG+TGG - chr4.2:40079781-40079800 None:intergenic 60.0%
!! GGAGGTGATGGAGATGGTGG+AGG - chr4.2:40079877-40079896 None:intergenic 60.0%
!! GGAGGTGGTGGTGATGGAGA+GGG - chr4.2:40078329-40078348 None:intergenic 60.0%
!! GGTGAAGGTGATGGTGGTGG+TGG - chr4.2:40078677-40078696 None:intergenic 60.0%
!! GGTGATGGAGAAGGCAGTGG+TGG - chr4.2:40079778-40079797 None:intergenic 60.0%
!! GGTGATGGAGATGGTGGAGG+TGG - chr4.2:40079874-40079893 None:intergenic 60.0%
!! GGTGGAGGAGGTGATGGAGA+AGG - chr4.2:40079787-40079806 None:intergenic 60.0%
!! GTGAAGGTGACGGTGGTGGA+GGG - chr4.2:40079252-40079271 None:intergenic 60.0%
!! GTGGTGAGGGAGATGGTGGA+GGG - chr4.2:40078391-40078410 None:intergenic 60.0%
!! TGAAGGTGACGGTGGTGGAG+GGG - chr4.2:40079251-40079270 None:intergenic 60.0%
!! TGGAGGTGGTGGTGATGGAG+AGG - chr4.2:40078879-40078898 None:intergenic 60.0%
!! TGGTGAGGGAGATGGTGGAG+GGG - chr4.2:40078390-40078409 None:intergenic 60.0%
GACATAGGGTGGGGGAGGTG+AGG - chr4.2:40078549-40078568 None:intergenic 65.0%
GGAGAAGGAGATGGAGGGGG+TGG - chr4.2:40078725-40078744 None:intergenic 65.0%
GGAGAGGGAGATGGAGGTGG+TGG - chr4.2:40078437-40078456 None:intergenic 65.0%
GGAGGAGAGGGAGATGGAGG+AGG - chr4.2:40078440-40078459 None:intergenic 65.0%
GGAGGAGAGGGAGATGGAGG+TGG - chr4.2:40078440-40078459 None:intergenic 65.0%
GGAGGAGGAGAGGGAGATGG+AGG - chr4.2:40078443-40078462 None:intergenic 65.0%
GGAGGAGGAGGAGAGGGAGA+TGG - chr4.2:40078446-40078465 None:intergenic 65.0%
GGAGGAGGAGGTGAAGGGGA+TGG - chr4.2:40078590-40078609 None:intergenic 65.0%
GGAGGAGGCGGTGAAGGTGA+AGG - chr4.2:40079739-40079758 None:intergenic 65.0%
GGAGGAGGTGAAGGGGATGG+AGG - chr4.2:40078587-40078606 None:intergenic 65.0%
GGAGGAGGTGAAGGGGATGG+TGG - chr4.2:40078587-40078606 None:intergenic 65.0%
GGAGGAGGTGGTGAAGGCGA+AGG - chr4.2:40079835-40079854 None:intergenic 65.0%
GGAGGCGGTGAAGGTGAAGG+AGG - chr4.2:40079736-40079755 None:intergenic 65.0%
GGAGGGGAAGGAGATGGAGG+AGG - chr4.2:40078488-40078507 None:intergenic 65.0%
GGAGGTGAAGGGGATGGAGG+TGG - chr4.2:40078584-40078603 None:intergenic 65.0%
GGAGGTGGGGGTGAAGGAGA+AGG - chr4.2:40079643-40079662 None:intergenic 65.0%
GGAGGTGGTGAAGGCGAAGG+AGG - chr4.2:40079832-40079851 None:intergenic 65.0%
GGCGGTGAAGGTGAAGGAGG+TGG - chr4.2:40079733-40079752 None:intergenic 65.0%
GGGGAAGGAGATGGAGGAGG+TGG - chr4.2:40078485-40078504 None:intergenic 65.0%
GGGGGAGGAGAAGGAGATGG+AGG - chr4.2:40078731-40078750 None:intergenic 65.0%
GGGGGAGGTGAAGGAGATGG+AGG - chr4.2:40078827-40078846 None:intergenic 65.0%
GGGGGTGAAGGAGAAGGAGG+AGG - chr4.2:40079637-40079656 None:intergenic 65.0%
GGTGAAGGCGAAGGAGGTGG+CGG - chr4.2:40079826-40079845 None:intergenic 65.0%
GGTGAAGGGGATGGAGGTGG+TGG - chr4.2:40078581-40078600 None:intergenic 65.0%
GGTGGAGGAGGAGAGGGAGA+TGG - chr4.2:40079499-40079518 None:intergenic 65.0%
GGTGGAGGGGGTGAAGGTGA+CGG - chr4.2:40078686-40078705 None:intergenic 65.0%
GGTGGAGGGGGTGAAGGTGA+TGG - chr4.2:40078686-40078705 None:intergenic 65.0%
GGTGGGGGAGGAGAAGGAGA+TGG - chr4.2:40078734-40078753 None:intergenic 65.0%
GGTGGGGGAGGAGAAGGTGA+TGG - chr4.2:40079310-40079329 None:intergenic 65.0%
GGTGGGGGAGGTGAAGGAGA+TGG - chr4.2:40078830-40078849 None:intergenic 65.0%
GGTGGGGGTGAAGGAGAAGG+AGG - chr4.2:40079640-40079659 None:intergenic 65.0%
GGTGGTGAAGGCGAAGGAGG+TGG - chr4.2:40079829-40079848 None:intergenic 65.0%
! ACATATGGCGGGGGAGGGGA+AGG - chr4.2:40078500-40078519 None:intergenic 65.0%
! GGAGGGGGTGAAGGTGATGG+TGG - chr4.2:40078683-40078702 None:intergenic 65.0%
! GGAGGTGAAGGGGATGGTGG+AGG - chr4.2:40078776-40078795 None:intergenic 65.0%
! GGAGGTGAGGGAGATGGTGG+TGG - chr4.2:40078536-40078555 None:intergenic 65.0%
! GGAGGTGGTGGTGAGGGAGA+TGG - chr4.2:40078398-40078417 None:intergenic 65.0%
! GGGGGAGGAGAAGGTGATGG+TGG - chr4.2:40079307-40079326 None:intergenic 65.0%
! GGTGAAGGTGACGGTGGTGG+AGG - chr4.2:40079253-40079272 None:intergenic 65.0%
! GGTGGAGATGGGGATGGTGG+AGG - chr4.2:40078632-40078651 None:intergenic 65.0%
! GGTGGTGAAGGGGATGGTGG+AGG - chr4.2:40079589-40079608 None:intergenic 65.0%
! GGTGGTGAGGGAGATGGTGG+AGG - chr4.2:40078392-40078411 None:intergenic 65.0%
! GGTGGTGGTGAGGGAGATGG+TGG - chr4.2:40078395-40078414 None:intergenic 65.0%
!! GGAGAAGGTGATGGTGGGGG+TGG - chr4.2:40079301-40079320 None:intergenic 65.0%
!! GGAGATGGGGATGGTGGAGG+TGG - chr4.2:40078629-40078648 None:intergenic 65.0%
!! GGAGGTGAGGGTGATGGTGG+AGG - chr4.2:40078920-40078939 None:intergenic 65.0%
!! GGAGGTGGTGGAGATGGGGA+CGG - chr4.2:40078638-40078657 None:intergenic 65.0%
!! GGAGGTGGTGGAGATGGGGA+TGG - chr4.2:40078638-40078657 None:intergenic 65.0%
!! GGAGGTGGTGGGGATGGAGA+CGG - chr4.2:40079547-40079566 None:intergenic 65.0%
!! GGGGGTGAAGGTGATGGTGG+GGG - chr4.2:40078680-40078699 None:intergenic 65.0%
!! GGGGGTGAAGGTGATGGTGG+TGG - chr4.2:40078680-40078699 None:intergenic 65.0%
!! GGTGAAGGAGATGGTGGGGG+TGG - chr4.2:40079682-40079701 None:intergenic 65.0%
!! GGTGAAGGGGATGGTGGAGG+AGG - chr4.2:40078773-40078792 None:intergenic 65.0%
!! GGTGAAGGGGATGGTGGAGG+TGG - chr4.2:40078773-40078792 None:intergenic 65.0%
!! GGTGAAGGTGATGGTGGGGG+TGG - chr4.2:40079445-40079464 None:intergenic 65.0%
!! GGTGAGGGAGATGGTGGAGG+GGG - chr4.2:40078389-40078408 None:intergenic 65.0%
!! GGTGAGGGAGATGGTGGTGG+TGG - chr4.2:40078533-40078552 None:intergenic 65.0%
!! GGTGAGGGTGATGGTGGAGG+AGG - chr4.2:40078917-40078936 None:intergenic 65.0%
!! GGTGATGGAGAGGGTGGTGG+TGG - chr4.2:40078869-40078888 None:intergenic 65.0%
!! GGTGGTGATGGAGAGGGTGG+TGG - chr4.2:40078872-40078891 None:intergenic 65.0%
!! GGTGGTGGAGATGGGGATGG+TGG - chr4.2:40078635-40078654 None:intergenic 65.0%
!! GGTGGTGGTGATGGAGAGGG+TGG - chr4.2:40078875-40078894 None:intergenic 65.0%
GGAGATGGGGACGGTGGAGG+TGG - chr4.2:40079397-40079416 None:intergenic 70.0%
GGAGGGGGTGGTGAAGGGGA+TGG - chr4.2:40079595-40079614 None:intergenic 70.0%
GGGGATGGAGACGGTGGAGG+TGG - chr4.2:40079538-40079557 None:intergenic 70.0%
GGGGGAGGGGAAGGAGATGG+AGG - chr4.2:40078491-40078510 None:intergenic 70.0%
GGGGGAGGTGAGGGAGATGG+TGG - chr4.2:40078539-40078558 None:intergenic 70.0%
GGGGGTGGTGAAGGGGATGG+TGG - chr4.2:40079592-40079611 None:intergenic 70.0%
GGTGGAGATGGGGACGGTGG+AGG - chr4.2:40079400-40079419 None:intergenic 70.0%
GGTGGGGATGGAGACGGTGG+AGG - chr4.2:40079541-40079560 None:intergenic 70.0%
GGTGGGGGAGGTGAGGGAGA+TGG - chr4.2:40078542-40078561 None:intergenic 70.0%
GGTGGGGGAGGTGAGGGTGA+TGG - chr4.2:40078926-40078945 None:intergenic 70.0%
! GGAGGGGGTGAAGGTGACGG+TGG - chr4.2:40079259-40079278 None:intergenic 70.0%
! GGGGGAGGTGAGGGTGATGG+TGG - chr4.2:40078923-40078942 None:intergenic 70.0%
! GGGGGTGAAGGTGACGGTGG+TGG - chr4.2:40079256-40079275 None:intergenic 70.0%
!! GAGGGAGATGGTGGAGGGGG+AGG - chr4.2:40078386-40078405 None:intergenic 70.0%
!! GGTGGTGGAGATGGGGACGG+TGG - chr4.2:40079403-40079422 None:intergenic 70.0%
!! GGTGGTGGGGATGGAGACGG+TGG - chr4.2:40079544-40079563 None:intergenic 70.0%
GGCGGGGGAGGGGAAGGAGA+TGG - chr4.2:40078494-40078513 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 40078113 40079945 40078113 ID=MS.gene056899
chr4.2 mRNA 40078113 40079945 40078113 ID=MS.gene056899.t1;Parent=MS.gene056899
chr4.2 exon 40078113 40079945 40078113 ID=MS.gene056899.t1.exon1;Parent=MS.gene056899.t1
chr4.2 CDS 40078113 40079945 40078113 ID=cds.MS.gene056899.t1;Parent=MS.gene056899.t1
Gene Sequence

>MS.gene056899

ATGGGAACCTCAATTGGGTTGAGGCACTTGCCTCAACTCATCTACGCAATAGCATTTTGCGTAATTGCAAGTAGTGTCGCTGCTGATGATTATAAGCCTTACTACGGTGGCCAACCAAACAACAACTATCCACAACCAACACCACCAAGTCATGGACAGCAGCCACCGTATTATTTCAAATCACCTCCATATTACTACAAGTCCCCGCCTCCATCATCTCCATCACCACCACCTCCCTATGTCCACAAATACCCACCATATTACTACAAACCTCCCCCTCCACCATCTCCCTCACCACCACCTCCATATGTGTACAAGTCCCCACCACCTCCATCTCCCTCTCCTCCTCCTCCATATGTTTACAAGTCACCACCTCCTCCATCTCCTTCCCCTCCCCCGCCATATGTCTATAAGAGTCCACCACCACCATCTCCCTCACCTCCCCCACCCTATGTCTACAAGTCACCACCACCTCCATCCCCTTCACCTCCTCCTCCATATGTCTACAAGTCACCACCTCCACCATCCCCATCTCCACCACCTCCATATGTCTACAAATCTCCACCACCACCATCACCTTCACCCCCTCCACCATATGTATATAAGTCACCACCCCCTCCATCTCCTTCTCCTCCCCCACCATATATTTACAAGTCACCACCTCCACCATCCCCTTCACCTCCTCCTCCATATGTCTACAAGTCACCACCTCCTCCATCTCCTTCACCTCCCCCACCATATGTCTATAAGAGTCCACCACCACCCTCTCCATCACCACCACCTCCATATGTCTACAAGTCTCCTCCTCCACCATCACCCTCACCTCCCCCACCATATGTTTACAAGTCACCACCACCTCCATCCCCTTCACCTCCTCCTCCATACGTCTACAAGTCACCACCTCCTCCATCTCCTTCACCTCCTCCACCATATGTCTATAAGAGTCCACCACCACCCTCTCAATCACCACCACCTCCATATCTCTACAAGTCTCCTCCTCCACCATCACCCTCACCTCCCCCACCCTATGTCTACAAGTCACCACCACCTCCATCCCCTTCACCTCCTCCTCCATATGTCTACAAGTCACCACCTCCACCATCCCCATCTCCACCACTTCCATATATTTACAAGTCCCCTCCACCACCGTCACCTTCACCCCCTCCACCATATATATACAAGTCCCCACCCCCACCATCACCTTCTCCTCCCCCACCCTATGTGTATAAGTCGCCACCACCTCCATCTCCTTCACCTCCTCCTCCATATGTCTACAAGTCACCACCTCCACCGTCCCCATCTCCACCACCTCCATATGTCTACAAATCTCCACCCCCACCATCACCTTCACCCCCTCCACCATATGTATATAAGTCACCTCCTCCATCTCCCTCTCCTCCTCCACCATATGTTTACAAGTCACCACCTCCACCGTCTCCATCCCCACCACCTCCATACATTTATAAGTCTCCTCCTCCACCATCCCCTTCACCACCCCCTCCATATGTCTATAAGTCCCCTCCTCCTCCTTCTCCTTCACCCCCACCTCCATATGTTTACATATCTCCACCCCCACCATCTCCTTCACCTCCTCCACCCTATGTCTATAAGTCACCACCACCTCCTTCACCTTCACCGCCTCCTCCATACTATTACAAATCTCCACCACTGCCTTCTCCATCACCTCCTCCACCATATGTCTATAAGTCACCGCCACCTCCTTCGCCTTCACCACCTCCTCCTTATATTTACAAGTCTCCACCTCCACCATCTCCATCACCTCCTCCATATCATCCCTACTTCTACAACTCACCGCCGCCTCCCGTCTATTAA
Protein sequence

>MS.gene056899.t1

MGTSIGLRHLPQLIYAIAFCVIASSVAADDYKPYYGGQPNNNYPQPTPPSHGQQPPYYFKSPPYYYKSPPPSSPSPPPPYVHKYPPYYYKPPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYIYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSQSPPPPYLYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPLPYIYKSPPPPSPSPPPPYIYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPSPSPPPPYVYKSPPPPSPSPPPPYIYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYISPPPPSPSPPPPYVYKSPPPPSPSPPPPYYYKSPPLPSPSPPPPYVYKSPPPPSPSPPPPYIYKSPPPPSPSPPPYHPYFYNSPPPPVY