Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70493.t1 | XP_003601473.2 | 96 | 248 | 3 | 1 | 4 | 251 | 3 | 243 | 3.10E-95 | 358.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70493.t1 | Q9SD84 | 48.3 | 89 | 46 | 0 | 163 | 251 | 19 | 107 | 9.5e-21 | 102.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70493.t1 | A0A396IY86 | 96.0 | 248 | 3 | 1 | 4 | 251 | 3 | 243 | 2.2e-95 | 358.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049239 | MS.gene70493 | 0.802833 | 4.65E-49 | -1.69E-46 |
MS.gene050338 | MS.gene70493 | 0.816846 | 4.48E-52 | -1.69E-46 |
MS.gene050707 | MS.gene70493 | 0.83405 | 3.75E-56 | -1.69E-46 |
MS.gene051539 | MS.gene70493 | 0.808938 | 2.42E-50 | -1.69E-46 |
MS.gene054941 | MS.gene70493 | 0.802528 | 5.37E-49 | -1.69E-46 |
MS.gene058853 | MS.gene70493 | 0.809229 | 2.10E-50 | -1.69E-46 |
MS.gene060825 | MS.gene70493 | 0.807542 | 4.80E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70493.t1 | MTR_3g082080 | 95.000 | 240 | 5 | 1 | 3 | 242 | 2 | 234 | 9.22e-163 | 450 |
MS.gene70493.t1 | MTR_1g116870 | 74.157 | 89 | 23 | 0 | 160 | 248 | 271 | 359 | 2.45e-43 | 150 |
MS.gene70493.t1 | MTR_5g015720 | 61.538 | 91 | 33 | 2 | 160 | 248 | 324 | 414 | 6.10e-32 | 121 |
MS.gene70493.t1 | MTR_8g085390 | 51.685 | 89 | 43 | 0 | 163 | 251 | 28 | 116 | 2.79e-28 | 106 |
MS.gene70493.t1 | MTR_1g056640 | 55.294 | 85 | 37 | 1 | 165 | 248 | 406 | 490 | 6.77e-26 | 105 |
MS.gene70493.t1 | MTR_5g085580 | 54.118 | 85 | 38 | 1 | 165 | 248 | 382 | 466 | 7.11e-26 | 105 |
MS.gene70493.t1 | MTR_5g097420 | 49.425 | 87 | 43 | 1 | 161 | 246 | 26 | 112 | 3.33e-24 | 94.0 |
MS.gene70493.t1 | MTR_8g089400 | 45.000 | 100 | 54 | 1 | 152 | 250 | 24 | 123 | 4.59e-24 | 94.7 |
MS.gene70493.t1 | MTR_8g089400 | 45.000 | 100 | 54 | 1 | 152 | 250 | 44 | 143 | 1.64e-23 | 94.0 |
MS.gene70493.t1 | MTR_4g133735 | 45.833 | 96 | 51 | 1 | 155 | 249 | 18 | 113 | 2.45e-23 | 91.7 |
MS.gene70493.t1 | MTR_8g085440 | 45.238 | 84 | 46 | 0 | 165 | 248 | 32 | 115 | 1.60e-22 | 89.4 |
MS.gene70493.t1 | MTR_7g111600 | 48.235 | 85 | 42 | 2 | 165 | 248 | 160 | 243 | 3.30e-22 | 92.4 |
MS.gene70493.t1 | MTR_8g085420 | 45.679 | 81 | 44 | 0 | 165 | 245 | 32 | 112 | 5.10e-22 | 89.0 |
MS.gene70493.t1 | MTR_7g111600 | 48.235 | 85 | 42 | 2 | 165 | 248 | 160 | 243 | 6.78e-22 | 92.4 |
MS.gene70493.t1 | MTR_7g111600 | 48.235 | 85 | 42 | 2 | 165 | 248 | 160 | 243 | 1.12e-21 | 92.0 |
MS.gene70493.t1 | MTR_2g049670 | 47.126 | 87 | 45 | 1 | 165 | 251 | 158 | 243 | 1.34e-21 | 92.0 |
MS.gene70493.t1 | MTR_4g133730 | 42.708 | 96 | 54 | 1 | 155 | 249 | 18 | 113 | 2.20e-21 | 86.7 |
MS.gene70493.t1 | MTR_4g109490 | 50.562 | 89 | 43 | 1 | 160 | 248 | 19 | 106 | 2.42e-21 | 89.4 |
MS.gene70493.t1 | MTR_1g084820 | 53.846 | 78 | 35 | 1 | 165 | 242 | 420 | 496 | 3.26e-21 | 92.8 |
MS.gene70493.t1 | MTR_3g048280 | 40.179 | 112 | 63 | 3 | 140 | 248 | 85 | 195 | 3.78e-21 | 88.6 |
MS.gene70493.t1 | MTR_1g084820 | 53.846 | 78 | 35 | 1 | 165 | 242 | 420 | 496 | 3.99e-21 | 92.4 |
MS.gene70493.t1 | MTR_6g088885 | 43.820 | 89 | 48 | 1 | 165 | 251 | 369 | 457 | 8.23e-21 | 91.3 |
MS.gene70493.t1 | MTR_8g085400 | 48.750 | 80 | 38 | 1 | 165 | 244 | 33 | 109 | 1.38e-20 | 84.3 |
MS.gene70493.t1 | MTR_1g022160 | 46.429 | 84 | 45 | 0 | 165 | 248 | 391 | 474 | 1.59e-20 | 90.5 |
MS.gene70493.t1 | MTR_5g044530 | 54.167 | 72 | 33 | 0 | 163 | 234 | 20 | 91 | 1.71e-20 | 87.8 |
MS.gene70493.t1 | MTR_8g102340 | 45.882 | 85 | 45 | 1 | 165 | 248 | 334 | 418 | 5.27e-20 | 89.0 |
MS.gene70493.t1 | MTR_5g091650 | 44.318 | 88 | 47 | 2 | 165 | 251 | 108 | 194 | 7.43e-20 | 84.7 |
MS.gene70493.t1 | MTR_4g083070 | 52.778 | 72 | 34 | 0 | 163 | 234 | 19 | 90 | 2.37e-19 | 83.2 |
MS.gene70493.t1 | MTR_4g132280 | 45.882 | 85 | 45 | 1 | 165 | 248 | 382 | 466 | 3.12e-19 | 86.7 |
MS.gene70493.t1 | MTR_5g091650 | 44.318 | 88 | 47 | 2 | 165 | 251 | 108 | 194 | 4.14e-19 | 84.3 |
MS.gene70493.t1 | MTR_3g083580 | 45.882 | 85 | 45 | 1 | 165 | 248 | 362 | 446 | 5.39e-19 | 85.9 |
MS.gene70493.t1 | MTR_8g085720 | 45.977 | 87 | 46 | 1 | 163 | 248 | 362 | 448 | 1.74e-18 | 84.7 |
MS.gene70493.t1 | MTR_7g053500 | 42.727 | 110 | 58 | 2 | 140 | 248 | 276 | 381 | 1.85e-18 | 84.0 |
MS.gene70493.t1 | MTR_3g116510 | 44.186 | 86 | 48 | 0 | 163 | 248 | 235 | 320 | 2.19e-18 | 83.2 |
MS.gene70493.t1 | MTR_7g053500 | 42.727 | 110 | 58 | 2 | 140 | 248 | 353 | 458 | 2.42e-18 | 84.0 |
MS.gene70493.t1 | MTR_8g012400 | 42.268 | 97 | 51 | 2 | 151 | 246 | 284 | 376 | 2.53e-18 | 83.6 |
MS.gene70493.t1 | MTR_1g022160 | 44.828 | 87 | 48 | 0 | 165 | 251 | 391 | 477 | 2.68e-18 | 84.0 |
MS.gene70493.t1 | MTR_8g012400 | 42.268 | 97 | 51 | 2 | 151 | 246 | 364 | 456 | 2.87e-18 | 84.0 |
MS.gene70493.t1 | MTR_3g116510 | 44.318 | 88 | 49 | 0 | 159 | 246 | 365 | 452 | 4.81e-18 | 83.2 |
MS.gene70493.t1 | MTR_4g079530 | 41.860 | 86 | 49 | 1 | 164 | 248 | 36 | 121 | 2.37e-17 | 76.3 |
MS.gene70493.t1 | MTR_1g022160 | 45.455 | 77 | 42 | 0 | 165 | 241 | 391 | 467 | 6.08e-17 | 80.1 |
MS.gene70493.t1 | MTR_4g079530 | 38.947 | 95 | 57 | 1 | 155 | 248 | 27 | 121 | 8.11e-17 | 76.3 |
MS.gene70493.t1 | MTR_4g069940 | 40.659 | 91 | 53 | 1 | 159 | 248 | 369 | 459 | 1.16e-16 | 79.3 |
MS.gene70493.t1 | MTR_7g026340 | 35.354 | 99 | 64 | 0 | 148 | 246 | 348 | 446 | 2.85e-16 | 77.8 |
MS.gene70493.t1 | MTR_4g083500 | 36.905 | 84 | 53 | 0 | 165 | 248 | 402 | 485 | 8.41e-16 | 76.6 |
MS.gene70493.t1 | MTR_1g031900 | 43.529 | 85 | 47 | 1 | 165 | 248 | 361 | 445 | 1.17e-15 | 76.3 |
MS.gene70493.t1 | MTR_1g031900 | 43.529 | 85 | 47 | 1 | 165 | 248 | 361 | 445 | 1.36e-15 | 76.3 |
MS.gene70493.t1 | MTR_5g078200 | 40.000 | 85 | 50 | 1 | 165 | 248 | 327 | 411 | 5.65e-15 | 74.3 |
MS.gene70493.t1 | MTR_5g078200 | 40.000 | 85 | 50 | 1 | 165 | 248 | 360 | 444 | 6.82e-15 | 74.3 |
MS.gene70493.t1 | MTR_2g072500 | 38.095 | 84 | 51 | 1 | 165 | 248 | 8 | 90 | 8.53e-14 | 65.9 |
MS.gene70493.t1 | MTR_8g088120 | 46.053 | 76 | 39 | 2 | 177 | 251 | 60 | 134 | 1.21e-13 | 68.6 |
MS.gene70493.t1 | MTR_4g088155 | 37.209 | 86 | 53 | 1 | 164 | 248 | 372 | 457 | 2.23e-13 | 69.7 |
MS.gene70493.t1 | MTR_3g065460 | 37.647 | 85 | 52 | 1 | 165 | 248 | 361 | 445 | 1.38e-12 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70493.t1 | AT1G79480 | 55.484 | 155 | 58 | 3 | 97 | 249 | 249 | 394 | 1.85e-43 | 151 |
MS.gene70493.t1 | AT1G79480 | 55.484 | 155 | 58 | 3 | 97 | 249 | 250 | 395 | 1.97e-43 | 151 |
MS.gene70493.t1 | AT5G67460 | 50.993 | 151 | 63 | 6 | 107 | 248 | 229 | 377 | 2.51e-38 | 137 |
MS.gene70493.t1 | AT5G67460 | 51.034 | 145 | 60 | 6 | 107 | 242 | 229 | 371 | 1.85e-35 | 130 |
MS.gene70493.t1 | AT4G13600 | 54.651 | 86 | 39 | 0 | 163 | 248 | 59 | 144 | 2.19e-30 | 113 |
MS.gene70493.t1 | AT2G04910 | 49.451 | 91 | 45 | 1 | 160 | 249 | 10 | 100 | 1.97e-26 | 99.4 |
MS.gene70493.t1 | AT5G35740 | 50.575 | 87 | 41 | 2 | 165 | 249 | 30 | 116 | 6.16e-24 | 93.2 |
MS.gene70493.t1 | AT2G04910 | 50.000 | 84 | 41 | 1 | 160 | 242 | 10 | 93 | 1.49e-23 | 92.4 |
MS.gene70493.t1 | AT1G18650 | 48.837 | 86 | 44 | 0 | 163 | 248 | 19 | 104 | 3.47e-23 | 93.2 |
MS.gene70493.t1 | AT1G18650 | 50.000 | 82 | 41 | 0 | 165 | 246 | 21 | 102 | 4.87e-23 | 91.3 |
MS.gene70493.t1 | AT2G30933 | 44.144 | 111 | 59 | 3 | 142 | 251 | 60 | 168 | 6.42e-23 | 93.6 |
MS.gene70493.t1 | AT5G55180 | 50.588 | 85 | 41 | 1 | 165 | 248 | 372 | 456 | 8.97e-23 | 96.7 |
MS.gene70493.t1 | AT4G26830 | 51.765 | 85 | 40 | 1 | 165 | 248 | 371 | 455 | 1.79e-22 | 95.9 |
MS.gene70493.t1 | AT4G26830 | 51.765 | 85 | 40 | 1 | 165 | 248 | 367 | 451 | 1.87e-22 | 95.9 |
MS.gene70493.t1 | AT4G05430 | 42.045 | 88 | 50 | 1 | 165 | 251 | 23 | 110 | 4.93e-22 | 89.0 |
MS.gene70493.t1 | AT2G05790 | 42.105 | 114 | 60 | 2 | 136 | 248 | 360 | 468 | 6.12e-22 | 94.4 |
MS.gene70493.t1 | AT1G11820 | 48.235 | 85 | 43 | 1 | 165 | 248 | 381 | 465 | 6.56e-22 | 94.7 |
MS.gene70493.t1 | AT4G05430 | 42.045 | 88 | 50 | 1 | 165 | 251 | 48 | 135 | 7.98e-22 | 89.4 |
MS.gene70493.t1 | AT2G30933 | 44.118 | 102 | 54 | 3 | 142 | 242 | 60 | 159 | 1.87e-21 | 88.2 |
MS.gene70493.t1 | AT2G30933 | 44.118 | 102 | 54 | 3 | 142 | 242 | 60 | 159 | 1.87e-21 | 88.2 |
MS.gene70493.t1 | AT1G29380 | 47.727 | 88 | 44 | 2 | 165 | 251 | 148 | 234 | 2.35e-21 | 90.1 |
MS.gene70493.t1 | AT5G61130 | 45.349 | 86 | 47 | 0 | 163 | 248 | 19 | 104 | 5.80e-21 | 87.8 |
MS.gene70493.t1 | AT5G56590 | 45.882 | 85 | 45 | 1 | 165 | 248 | 369 | 453 | 5.86e-21 | 91.7 |
MS.gene70493.t1 | AT1G29380 | 48.235 | 85 | 42 | 2 | 165 | 248 | 148 | 231 | 1.01e-20 | 89.4 |
MS.gene70493.t1 | AT3G13560 | 47.126 | 87 | 45 | 1 | 163 | 248 | 360 | 446 | 1.68e-20 | 90.5 |
MS.gene70493.t1 | AT3G13560 | 47.126 | 87 | 45 | 1 | 163 | 248 | 360 | 446 | 1.68e-20 | 90.5 |
MS.gene70493.t1 | AT3G13560 | 47.126 | 87 | 45 | 1 | 163 | 248 | 360 | 446 | 1.68e-20 | 90.5 |
MS.gene70493.t1 | AT3G13560 | 47.126 | 87 | 45 | 1 | 163 | 248 | 360 | 446 | 1.68e-20 | 90.5 |
MS.gene70493.t1 | AT3G13560 | 47.126 | 87 | 45 | 1 | 163 | 248 | 360 | 446 | 1.68e-20 | 90.5 |
MS.gene70493.t1 | AT4G34480 | 42.857 | 84 | 48 | 0 | 165 | 248 | 253 | 336 | 4.72e-20 | 88.6 |
MS.gene70493.t1 | AT5G55180 | 50.633 | 79 | 38 | 1 | 165 | 242 | 372 | 450 | 5.21e-20 | 89.0 |
MS.gene70493.t1 | AT4G34480 | 42.857 | 84 | 48 | 0 | 165 | 248 | 364 | 447 | 6.47e-20 | 89.0 |
MS.gene70493.t1 | AT5G63225 | 42.857 | 84 | 48 | 0 | 165 | 248 | 25 | 108 | 7.78e-20 | 82.4 |
MS.gene70493.t1 | AT5G24318 | 40.698 | 86 | 51 | 0 | 165 | 250 | 233 | 318 | 8.77e-20 | 87.0 |
MS.gene70493.t1 | AT5G08000 | 48.837 | 86 | 44 | 0 | 163 | 248 | 19 | 104 | 1.06e-19 | 84.3 |
MS.gene70493.t1 | AT1G29380 | 49.367 | 79 | 38 | 2 | 165 | 242 | 148 | 225 | 1.11e-19 | 85.1 |
MS.gene70493.t1 | AT1G29380 | 49.367 | 79 | 38 | 2 | 165 | 242 | 148 | 225 | 1.11e-19 | 85.1 |
MS.gene70493.t1 | AT4G29360 | 45.882 | 85 | 45 | 1 | 165 | 248 | 401 | 485 | 1.56e-19 | 87.8 |
MS.gene70493.t1 | AT4G29360 | 45.882 | 85 | 45 | 1 | 165 | 248 | 391 | 475 | 1.63e-19 | 87.8 |
MS.gene70493.t1 | AT5G63250 | 42.697 | 89 | 48 | 1 | 165 | 250 | 42 | 130 | 1.67e-19 | 82.0 |
MS.gene70493.t1 | AT5G08000 | 48.837 | 86 | 44 | 0 | 163 | 248 | 38 | 123 | 1.85e-19 | 84.0 |
MS.gene70493.t1 | AT5G24318 | 40.698 | 86 | 51 | 0 | 165 | 250 | 372 | 457 | 1.96e-19 | 87.4 |
MS.gene70493.t1 | AT1G66870 | 36.111 | 108 | 63 | 2 | 142 | 248 | 8 | 110 | 2.60e-19 | 80.9 |
MS.gene70493.t1 | AT2G01630 | 42.353 | 85 | 48 | 1 | 165 | 248 | 360 | 444 | 2.80e-19 | 87.0 |
MS.gene70493.t1 | AT1G66870 | 36.111 | 108 | 63 | 2 | 142 | 248 | 35 | 137 | 3.03e-19 | 81.6 |
MS.gene70493.t1 | AT1G11820 | 48.101 | 79 | 40 | 1 | 165 | 242 | 381 | 459 | 3.39e-19 | 86.7 |
MS.gene70493.t1 | AT1G69295 | 50.685 | 73 | 35 | 1 | 162 | 234 | 14 | 85 | 3.46e-19 | 83.6 |
MS.gene70493.t1 | AT2G29735 | 36.364 | 121 | 67 | 3 | 131 | 249 | 5 | 117 | 4.78e-19 | 80.5 |
MS.gene70493.t1 | AT4G05430 | 43.038 | 79 | 44 | 1 | 165 | 242 | 48 | 126 | 6.46e-19 | 80.5 |
MS.gene70493.t1 | AT1G09460 | 47.674 | 86 | 43 | 2 | 165 | 250 | 137 | 220 | 7.32e-19 | 84.7 |
MS.gene70493.t1 | AT1G66855 | 38.554 | 83 | 50 | 1 | 165 | 246 | 26 | 108 | 1.41e-18 | 79.0 |
MS.gene70493.t1 | AT1G69295 | 50.000 | 72 | 35 | 1 | 163 | 234 | 19 | 89 | 2.48e-18 | 81.3 |
MS.gene70493.t1 | AT4G09462 | 37.209 | 86 | 54 | 0 | 165 | 250 | 29 | 114 | 2.77e-18 | 78.2 |
MS.gene70493.t1 | AT5G63230 | 39.286 | 84 | 51 | 0 | 165 | 248 | 26 | 109 | 3.43e-18 | 78.2 |
MS.gene70493.t1 | AT5G63240 | 35.849 | 106 | 65 | 1 | 148 | 250 | 23 | 128 | 4.03e-18 | 78.6 |
MS.gene70493.t1 | AT4G09465 | 31.776 | 107 | 73 | 0 | 144 | 250 | 10 | 116 | 7.72e-18 | 77.4 |
MS.gene70493.t1 | AT4G09467 | 31.776 | 107 | 73 | 0 | 144 | 250 | 10 | 116 | 8.05e-18 | 77.0 |
MS.gene70493.t1 | AT4G09464 | 31.776 | 107 | 73 | 0 | 144 | 250 | 10 | 116 | 8.05e-18 | 77.0 |
MS.gene70493.t1 | AT1G66852 | 41.379 | 87 | 45 | 3 | 165 | 248 | 26 | 109 | 9.62e-18 | 76.6 |
MS.gene70493.t1 | AT4G09466 | 30.841 | 107 | 74 | 0 | 144 | 250 | 10 | 116 | 1.94e-17 | 76.3 |
MS.gene70493.t1 | AT5G24318 | 41.250 | 80 | 47 | 0 | 165 | 244 | 372 | 451 | 2.63e-17 | 80.9 |
MS.gene70493.t1 | AT2G01630 | 43.038 | 79 | 44 | 1 | 165 | 242 | 360 | 438 | 3.13e-17 | 80.9 |
MS.gene70493.t1 | AT2G16230 | 39.286 | 84 | 51 | 0 | 165 | 248 | 366 | 449 | 3.50e-17 | 80.9 |
MS.gene70493.t1 | AT3G55430 | 39.024 | 82 | 50 | 0 | 165 | 246 | 366 | 447 | 1.37e-16 | 79.0 |
MS.gene70493.t1 | AT4G09090 | 30.841 | 107 | 74 | 0 | 144 | 250 | 10 | 116 | 1.98e-16 | 73.6 |
MS.gene70493.t1 | AT1G66250 | 37.647 | 85 | 52 | 1 | 165 | 248 | 368 | 452 | 6.96e-16 | 77.0 |
MS.gene70493.t1 | AT1G13830 | 44.444 | 72 | 40 | 0 | 163 | 234 | 33 | 104 | 8.34e-16 | 74.3 |
MS.gene70493.t1 | AT1G13830 | 44.444 | 72 | 40 | 0 | 163 | 234 | 19 | 90 | 9.64e-16 | 73.9 |
MS.gene70493.t1 | AT4G16165 | 35.294 | 85 | 54 | 1 | 165 | 248 | 26 | 110 | 1.38e-15 | 71.2 |
MS.gene70493.t1 | AT5G53600 | 32.692 | 104 | 64 | 2 | 145 | 248 | 14 | 111 | 1.58e-15 | 70.9 |
MS.gene70493.t1 | AT1G26450 | 44.595 | 74 | 40 | 1 | 163 | 236 | 19 | 91 | 1.65e-15 | 73.2 |
MS.gene70493.t1 | AT3G23770 | 37.755 | 98 | 60 | 1 | 152 | 248 | 374 | 471 | 6.74e-15 | 73.9 |
MS.gene70493.t1 | AT3G07320 | 41.860 | 86 | 49 | 1 | 164 | 248 | 370 | 455 | 1.60e-14 | 72.8 |
MS.gene70493.t1 | AT5G53610 | 40.476 | 84 | 49 | 1 | 165 | 248 | 28 | 110 | 3.16e-14 | 67.4 |
MS.gene70493.t1 | AT2G39640 | 32.941 | 85 | 57 | 0 | 163 | 247 | 458 | 542 | 3.95e-14 | 72.0 |
MS.gene70493.t1 | AT2G39640 | 35.366 | 82 | 53 | 0 | 165 | 246 | 359 | 440 | 3.13e-13 | 69.3 |
MS.gene70493.t1 | AT2G43670 | 35.294 | 85 | 54 | 1 | 165 | 249 | 35 | 118 | 4.72e-14 | 67.4 |
MS.gene70493.t1 | AT2G03505 | 38.889 | 72 | 44 | 0 | 163 | 234 | 19 | 90 | 3.58e-13 | 64.7 |
MS.gene70493.t1 | AT3G58100 | 37.079 | 89 | 55 | 1 | 161 | 248 | 37 | 125 | 3.86e-13 | 66.2 |
MS.gene70493.t1 | AT2G03505 | 38.889 | 72 | 44 | 0 | 163 | 234 | 19 | 90 | 4.95e-13 | 65.9 |
MS.gene70493.t1 | AT2G03505 | 38.889 | 72 | 44 | 0 | 163 | 234 | 19 | 90 | 4.95e-13 | 65.9 |
MS.gene70493.t1 | AT2G03505 | 38.889 | 72 | 44 | 0 | 163 | 234 | 19 | 90 | 4.95e-13 | 65.9 |
MS.gene70493.t1 | AT3G58100 | 37.931 | 87 | 53 | 1 | 161 | 246 | 113 | 199 | 5.00e-13 | 67.4 |
MS.gene70493.t1 | AT2G43660 | 31.356 | 118 | 80 | 1 | 133 | 249 | 2 | 119 | 4.20e-12 | 62.0 |
MS.gene70493.t1 | AT2G42930 | 37.209 | 86 | 53 | 1 | 160 | 245 | 35 | 119 | 5.61e-12 | 62.0 |
MS.gene70493.t1 | AT2G43660 | 29.915 | 117 | 75 | 2 | 140 | 249 | 4 | 120 | 2.14e-11 | 60.1 |
MS.gene70493.t1 | AT4G14080 | 31.000 | 100 | 68 | 1 | 150 | 248 | 374 | 473 | 5.76e-11 | 62.4 |
Find 62 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGGACTATGCTTGTGGGTC+TGG | 0.148531 | 3.1:-66923173 | MS.gene70493:CDS |
TGGACTATGCTTGTGGGTCT+GGG | 0.289091 | 3.1:-66923172 | MS.gene70493:CDS |
TCCATAGCCAGTTGAATTAT+AGG | 0.302335 | 3.1:+66923191 | None:intergenic |
GATGAGCAATGTTGAATCTA+AGG | 0.322497 | 3.1:+66923784 | None:intergenic |
GGGTTTGGAACAGGTGAATA+AGG | 0.327081 | 3.1:+66923437 | None:intergenic |
AGCCCACCTAAAAGTGTTAT+AGG | 0.340995 | 3.1:-66923323 | MS.gene70493:CDS |
TCAGATTTAGATTCTTCATA+TGG | 0.344846 | 3.1:-66923524 | MS.gene70493:CDS |
TGTAAATCAGTTCAGCCTAA+TGG | 0.349309 | 3.1:-66923143 | MS.gene70493:CDS |
CTTATGCATTCAATAGCTAT+TGG | 0.355474 | 3.1:-66923082 | MS.gene70493:CDS |
GAGTTTCTTCCATGATTTGA+TGG | 0.359457 | 3.1:+66923589 | None:intergenic |
GGTGGAAGGGGTTGAGAAGA+AGG | 0.373189 | 3.1:+66923497 | None:intergenic |
AAGAAACTCAAATATCAAAA+TGG | 0.376268 | 3.1:-66923575 | MS.gene70493:CDS |
AAAACATCATGAGGTGGGTT+TGG | 0.378635 | 3.1:+66923422 | None:intergenic |
GTAAATCAGTTCAGCCTAAT+GGG | 0.395511 | 3.1:-66923142 | MS.gene70493:CDS |
AGCCACCACAATATGCTATC+TGG | 0.408308 | 3.1:-66923241 | MS.gene70493:CDS |
TCCTGATCCTATAATTCAAC+TGG | 0.420616 | 3.1:-66923198 | MS.gene70493:CDS |
GATGGGCTTGGAGGTGGTGG+CGG | 0.424976 | 3.1:+66923359 | None:intergenic |
GCCAGTTGAATTATAGGATC+AGG | 0.436233 | 3.1:+66923197 | None:intergenic |
TTTGCAGATGCTATAAATCA+TGG | 0.443939 | 3.1:-66923632 | MS.gene70493:intron |
GAATAAGGTGGTAGAGAGGT+AGG | 0.451500 | 3.1:+66923452 | None:intergenic |
TCATGAGGTGGGTTTGGAAC+AGG | 0.452737 | 3.1:+66923428 | None:intergenic |
TCCTATAATTCAACTGGCTA+TGG | 0.461085 | 3.1:-66923192 | MS.gene70493:CDS |
TTTGATGGGCTTGGAGGTGG+TGG | 0.461788 | 3.1:+66923356 | None:intergenic |
TGGCTATGGACTATGCTTGT+GGG | 0.470072 | 3.1:-66923178 | MS.gene70493:CDS |
GGTGGTGGTGGATAAACAAT+AGG | 0.486021 | 3.1:+66923278 | None:intergenic |
GGCTGGAAGCATATCCCATT+AGG | 0.500978 | 3.1:+66923128 | None:intergenic |
TATTGGCAGAACACTAAGAT+TGG | 0.504275 | 3.1:-66923065 | MS.gene70493:CDS |
GCATGTGCCAACACTGTGTT+GGG | 0.505340 | 3.1:+66923107 | None:intergenic |
AGGTGAATAAGGTGGTAGAG+AGG | 0.507925 | 3.1:+66923448 | None:intergenic |
CTGGCTATGGACTATGCTTG+TGG | 0.509897 | 3.1:-66923179 | MS.gene70493:CDS |
GTGCCAACACTGTGTTGGGC+TGG | 0.515870 | 3.1:+66923111 | None:intergenic |
TTATGACTTGAAGGTGGTGG+TGG | 0.522446 | 3.1:+66923266 | None:intergenic |
ATTATAGGATCAGGAACTGT+AGG | 0.522750 | 3.1:+66923206 | None:intergenic |
GGTGGTAGAGAGGTAGGTTG+TGG | 0.528352 | 3.1:+66923458 | None:intergenic |
GGCAGAACACTAAGATTGGT+GGG | 0.533300 | 3.1:-66923061 | MS.gene70493:CDS |
TAAGCTCTTGATGAATCCAT+TGG | 0.534192 | 3.1:+66923810 | None:intergenic |
GAAGCTACTCCATCAAATCA+TGG | 0.534607 | 3.1:-66923598 | MS.gene70493:CDS |
GGACTATGCTTGTGGGTCTG+GGG | 0.539971 | 3.1:-66923171 | MS.gene70493:CDS |
TGCATGGTTTACCACACAAA+GGG | 0.541460 | 3.1:+66923730 | None:intergenic |
GATGCTATAAATCATGGAAG+AGG | 0.563923 | 3.1:-66923626 | MS.gene70493:CDS |
GGTGGCAAGTATACTTGAGG+TGG | 0.566837 | 3.1:+66923299 | None:intergenic |
TGGCAGAACACTAAGATTGG+TGG | 0.568883 | 3.1:-66923062 | MS.gene70493:CDS |
CAAGTGAATTGAAAGGTGGA+AGG | 0.573973 | 3.1:+66923483 | None:intergenic |
AGCATGTGCCAACACTGTGT+TGG | 0.585546 | 3.1:+66923106 | None:intergenic |
AAGTGAATTGAAAGGTGGAA+GGG | 0.615025 | 3.1:+66923484 | None:intergenic |
CTTCCAGCCCAACACAGTGT+TGG | 0.616634 | 3.1:-66923114 | MS.gene70493:CDS |
GCAGAACACTAAGATTGGTG+GGG | 0.618966 | 3.1:-66923060 | MS.gene70493:CDS |
AGTGAATTGAAAGGTGGAAG+GGG | 0.620889 | 3.1:+66923485 | None:intergenic |
CAGAACACTAAGATTGGTGG+GGG | 0.628305 | 3.1:-66923059 | MS.gene70493:CDS |
GAGTGGAAACTAGCATCAAG+AGG | 0.637802 | 3.1:+66923757 | None:intergenic |
GGTGGTGGATAAACAATAGG+TGG | 0.638764 | 3.1:+66923281 | None:intergenic |
TTTGGAACAGGTGAATAAGG+TGG | 0.645722 | 3.1:+66923440 | None:intergenic |
ATAGGTGGCAAGTATACTTG+AGG | 0.650538 | 3.1:+66923296 | None:intergenic |
ATGCATGGTTTACCACACAA+AGG | 0.652538 | 3.1:+66923729 | None:intergenic |
GTGGCAAGTATACTTGAGGT+GGG | 0.653749 | 3.1:+66923300 | None:intergenic |
TGGCGGCGACATTGTAACAG+TGG | 0.658796 | 3.1:+66923376 | None:intergenic |
CACCAGATAGCATATTGTGG+TGG | 0.680993 | 3.1:+66923239 | None:intergenic |
ACCACACAAAGGGAAAAGAG+TGG | 0.683572 | 3.1:+66923740 | None:intergenic |
ACACACCAGATAGCATATTG+TGG | 0.683997 | 3.1:+66923236 | None:intergenic |
TGTGGTGCAAGTGAATTGAA+AGG | 0.698579 | 3.1:+66923476 | None:intergenic |
GGTGCAAGTGAATTGAAAGG+TGG | 0.701271 | 3.1:+66923479 | None:intergenic |
ACAATATGCTATCTGGTGTG+TGG | 0.720976 | 3.1:-66923234 | MS.gene70493:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAAAATAAATTTATTTTTT+TGG | - | chr3.1:66923016-66923035 | MS.gene70493:CDS | 0.0% |
!!! | TTTAGTTTTTTATTTAAAAG+AGG | + | chr3.1:66923609-66923628 | None:intergenic | 10.0% |
!! | CTCAAAAAAACAAAAAAAAA+GGG | + | chr3.1:66923432-66923451 | None:intergenic | 15.0% |
!! | TAATGATAAAATTATATGCA+TGG | - | chr3.1:66922876-66922895 | MS.gene70493:intron | 15.0% |
!! | TTTATCAGCAATTAAAAAAA+AGG | + | chr3.1:66922642-66922661 | None:intergenic | 15.0% |
!!! | ATAAAGGAACTTTTTTTTTT+TGG | - | chr3.1:66922676-66922695 | MS.gene70493:intron | 15.0% |
!!! | GTCTTTTTAATTTAAAACTA+TGG | - | chr3.1:66923725-66923744 | MS.gene70493:intron | 15.0% |
!! | AAGAAACTCAAATATCAAAA+TGG | - | chr3.1:66921759-66921778 | MS.gene70493:intron | 20.0% |
!! | CCTCAAAAAAACAAAAAAAA+AGG | + | chr3.1:66923433-66923452 | None:intergenic | 20.0% |
!!! | AAATTTTCTCATATGGATAA+AGG | - | chr3.1:66922660-66922679 | MS.gene70493:intron | 20.0% |
!!! | CATCACTAAATGATTATTTT+TGG | + | chr3.1:66922601-66922620 | None:intergenic | 20.0% |
!!! | CCTTTTTTTTTGTTTTTTTG+AGG | - | chr3.1:66923430-66923449 | MS.gene70493:CDS | 20.0% |
!!! | GTTTTAAATTAAAAAGACGA+CGG | + | chr3.1:66923723-66923742 | None:intergenic | 20.0% |
!!! | TTCAACAAATTTTCATCATT+TGG | - | chr3.1:66921783-66921802 | MS.gene70493:intron | 20.0% |
!!! | TTGGACCATTTATTTTTAAT+CGG | + | chr3.1:66923276-66923295 | None:intergenic | 20.0% |
!!! | TTTTTTTTTGGTACAACATA+TGG | - | chr3.1:66922688-66922707 | MS.gene70493:intron | 20.0% |
! | AAAATTATATGCATGGACTT+TGG | - | chr3.1:66922883-66922902 | MS.gene70493:intron | 25.0% |
! | ACACCAGTAAAATATCATTA+AGG | + | chr3.1:66922757-66922776 | None:intergenic | 25.0% |
! | ACATAATCTGATGTAATCAT+AGG | - | chr3.1:66922474-66922493 | MS.gene70493:intron | 25.0% |
! | ACTTAACTAACGGTTAAATA+AGG | + | chr3.1:66923141-66923160 | None:intergenic | 25.0% |
! | AGTTGATCTAATAATTACGA+TGG | - | chr3.1:66922931-66922950 | MS.gene70493:intron | 25.0% |
! | ATGTGAAATGACTTAACTAA+CGG | + | chr3.1:66923151-66923170 | None:intergenic | 25.0% |
! | CACCAGTAAAATATCATTAA+GGG | + | chr3.1:66922756-66922775 | None:intergenic | 25.0% |
! | CATATAATTATATGCATGCA+TGG | + | chr3.1:66921623-66921642 | None:intergenic | 25.0% |
! | TCAGATTTAGATTCTTCATA+TGG | - | chr3.1:66921810-66921829 | MS.gene70493:intron | 25.0% |
!! | AACCCTTAATGATATTTTAC+TGG | - | chr3.1:66922751-66922770 | MS.gene70493:intron | 25.0% |
!! | CAACAGATCATATTTAAGTT+TGG | + | chr3.1:66923339-66923358 | None:intergenic | 25.0% |
!! | GCTGATAAAATTTTCTCATA+TGG | - | chr3.1:66922653-66922672 | MS.gene70493:intron | 25.0% |
!! | TGATATTTTACTGGTGTATT+TGG | - | chr3.1:66922760-66922779 | MS.gene70493:intron | 25.0% |
!!! | ACCATTTATTTTTAATCGGA+CGG | + | chr3.1:66923272-66923291 | None:intergenic | 25.0% |
ATACTATATCCACACAACAA+AGG | - | chr3.1:66923174-66923193 | MS.gene70493:CDS | 30.0% | |
ATGCATTCTATGTAGTTACA+AGG | + | chr3.1:66923697-66923716 | None:intergenic | 30.0% | |
CCAAATGAAAAGAAATCAAG+TGG | + | chr3.1:66923206-66923225 | None:intergenic | 30.0% | |
CTTATGCATTCAATAGCTAT+TGG | - | chr3.1:66922252-66922271 | MS.gene70493:intron | 30.0% | |
TTGGTACAACATATGGATAA+AGG | - | chr3.1:66922695-66922714 | MS.gene70493:intron | 30.0% | |
TTTGCAGATGCTATAAATCA+TGG | - | chr3.1:66921702-66921721 | MS.gene70493:intron | 30.0% | |
! | ACTTTAGTGTGTGTAACTTT+TGG | - | chr3.1:66921675-66921694 | MS.gene70493:intron | 30.0% |
! | CCACTTGATTTCTTTTCATT+TGG | - | chr3.1:66923203-66923222 | MS.gene70493:CDS | 30.0% |
AAAACCCGAATTCCTAACAT+CGG | - | chr3.1:66923243-66923262 | MS.gene70493:CDS | 35.0% | |
AAGTGAATTGAAAGGTGGAA+GGG | + | chr3.1:66921853-66921872 | None:intergenic | 35.0% | |
ACCACAAAGGTAAACAAAGA+TGG | + | chr3.1:66922362-66922381 | None:intergenic | 35.0% | |
AGTCTGTGACTATATGTGTT+CGG | - | chr3.1:66922401-66922420 | MS.gene70493:intron | 35.0% | |
ATAACCTGCGAAATAAATCG+TGG | + | chr3.1:66923783-66923802 | None:intergenic | 35.0% | |
ATTATAGGATCAGGAACTGT+AGG | + | chr3.1:66922131-66922150 | None:intergenic | 35.0% | |
CCACATACACATATTCACAA+CGG | - | chr3.1:66923516-66923535 | MS.gene70493:CDS | 35.0% | |
GAATCTAGATCGAACAATGT+AGG | + | chr3.1:66923646-66923665 | None:intergenic | 35.0% | |
GAGTTTCTTCCATGATTTGA+TGG | + | chr3.1:66921748-66921767 | None:intergenic | 35.0% | |
GATGAGCAATGTTGAATCTA+AGG | + | chr3.1:66921553-66921572 | None:intergenic | 35.0% | |
GATGCTATAAATCATGGAAG+AGG | - | chr3.1:66921708-66921727 | MS.gene70493:intron | 35.0% | |
GCCGTCCGATTAAAAATAAA+TGG | - | chr3.1:66923268-66923287 | MS.gene70493:CDS | 35.0% | |
GTAAATCAGTTCAGCCTAAT+GGG | - | chr3.1:66922192-66922211 | MS.gene70493:intron | 35.0% | |
TAACCTGCGAAATAAATCGT+GGG | + | chr3.1:66923782-66923801 | None:intergenic | 35.0% | |
TATGAGATTCTTACCGATGT+CGG | + | chr3.1:66922449-66922468 | None:intergenic | 35.0% | |
TATTGGCAGAACACTAAGAT+TGG | - | chr3.1:66922269-66922288 | MS.gene70493:intron | 35.0% | |
TCCATAGCCAGTTGAATTAT+AGG | + | chr3.1:66922146-66922165 | None:intergenic | 35.0% | |
TCCTATAATTCAACTGGCTA+TGG | - | chr3.1:66922142-66922161 | MS.gene70493:intron | 35.0% | |
TCCTGATCCTATAATTCAAC+TGG | - | chr3.1:66922136-66922155 | MS.gene70493:intron | 35.0% | |
TGTAAATCAGTTCAGCCTAA+TGG | - | chr3.1:66922191-66922210 | MS.gene70493:intron | 35.0% | |
TTTCACCATATAGTCACCTA+TGG | + | chr3.1:66922571-66922590 | None:intergenic | 35.0% | |
! | ACCATCTTTGTTTACCTTTG+TGG | - | chr3.1:66922358-66922377 | MS.gene70493:intron | 35.0% |
! | GACATTGTAACAGTGGTTTT+AGG | + | chr3.1:66921954-66921973 | None:intergenic | 35.0% |
! | TTTTTATGACTTGAAGGTGG+TGG | + | chr3.1:66922074-66922093 | None:intergenic | 35.0% |
!! | CTTTTCATTTGGAATCCATC+CGG | - | chr3.1:66923214-66923233 | MS.gene70493:CDS | 35.0% |
!! | TTTTCATTTGGAATCCATCC+GGG | - | chr3.1:66923215-66923234 | MS.gene70493:CDS | 35.0% |
!!! | TTTTGAGGTGCACATTTCAT+TGG | - | chr3.1:66923445-66923464 | MS.gene70493:CDS | 35.0% |
AAAAAAGGGATCAGACATCC+TGG | + | chr3.1:66923418-66923437 | None:intergenic | 40.0% | |
AAACCCACGATTTATTTCGC+AGG | - | chr3.1:66923776-66923795 | MS.gene70493:CDS | 40.0% | |
ACAAATGATGCACACCACAA+AGG | + | chr3.1:66922375-66922394 | None:intergenic | 40.0% | |
ACAATATGCTATCTGGTGTG+TGG | - | chr3.1:66922100-66922119 | MS.gene70493:intron | 40.0% | |
ACACACCAGATAGCATATTG+TGG | + | chr3.1:66922101-66922120 | None:intergenic | 40.0% | |
AGGATTCACTTTCACGACAT+AGG | + | chr3.1:66923677-66923696 | None:intergenic | 40.0% | |
AGTGAATTGAAAGGTGGAAG+GGG | + | chr3.1:66921852-66921871 | None:intergenic | 40.0% | |
ATAGGTGGCAAGTATACTTG+AGG | + | chr3.1:66922041-66922060 | None:intergenic | 40.0% | |
ATATGTGTTCGGACACGATA+CGG | - | chr3.1:66922412-66922431 | MS.gene70493:intron | 40.0% | |
ATCGAACAATGTAGGTTTCG+AGG | + | chr3.1:66923638-66923657 | None:intergenic | 40.0% | |
ATGCATGGTTTACCACACAA+AGG | + | chr3.1:66921608-66921627 | None:intergenic | 40.0% | |
CAAGTGAATTGAAAGGTGGA+AGG | + | chr3.1:66921854-66921873 | None:intergenic | 40.0% | |
CCGTTGTGAATATGTGTATG+TGG | + | chr3.1:66923519-66923538 | None:intergenic | 40.0% | |
CGAAATAAATCGTGGGTTTG+AGG | + | chr3.1:66923775-66923794 | None:intergenic | 40.0% | |
GAAGCTACTCCATCAAATCA+TGG | - | chr3.1:66921736-66921755 | MS.gene70493:intron | 40.0% | |
GCCAGTTGAATTATAGGATC+AGG | + | chr3.1:66922140-66922159 | None:intergenic | 40.0% | |
GCCTAAAAACATCATGAGGT+GGG | + | chr3.1:66921920-66921939 | None:intergenic | 40.0% | |
TGCATGGTTTACCACACAAA+GGG | + | chr3.1:66921607-66921626 | None:intergenic | 40.0% | |
TGTGGTGCAAGTGAATTGAA+AGG | + | chr3.1:66921861-66921880 | None:intergenic | 40.0% | |
! | AAAACATCATGAGGTGGGTT+TGG | + | chr3.1:66921915-66921934 | None:intergenic | 40.0% |
! | ACCCACCTCATGATGTTTTT+AGG | - | chr3.1:66921916-66921935 | MS.gene70493:intron | 40.0% |
! | GATGGTAGTGCAAACTTACT+TGG | + | chr3.1:66922344-66922363 | None:intergenic | 40.0% |
! | GGCTTTTTATGACTTGAAGG+TGG | + | chr3.1:66922077-66922096 | None:intergenic | 40.0% |
! | GGTGGCTTTTTATGACTTGA+AGG | + | chr3.1:66922080-66922099 | None:intergenic | 40.0% |
! | TTTGGAACAGGTGAATAAGG+TGG | + | chr3.1:66921897-66921916 | None:intergenic | 40.0% |
!! | AGCCCACCTAAAAGTGTTAT+AGG | - | chr3.1:66922011-66922030 | MS.gene70493:intron | 40.0% |
!! | ATAACACTTTTAGGTGGGCT+TGG | + | chr3.1:66922011-66922030 | None:intergenic | 40.0% |
!! | GGCCTATAACACTTTTAGGT+GGG | + | chr3.1:66922016-66922035 | None:intergenic | 40.0% |
!!! | GGCTTGGAACATGTTTTGAT+GGG | + | chr3.1:66921995-66922014 | None:intergenic | 40.0% |
!!! | GTAACAGTGGTTTTAGGACT+TGG | + | chr3.1:66921948-66921967 | None:intergenic | 40.0% |
ACCACACAAAGGGAAAAGAG+TGG | + | chr3.1:66921597-66921616 | None:intergenic | 45.0% | |
AGCCACCACAATATGCTATC+TGG | - | chr3.1:66922093-66922112 | MS.gene70493:intron | 45.0% | |
AGGTGAATAAGGTGGTAGAG+AGG | + | chr3.1:66921889-66921908 | None:intergenic | 45.0% | |
ATCAGACATCCTGGTACTCA+GGG | + | chr3.1:66923409-66923428 | None:intergenic | 45.0% | |
CACCAGATAGCATATTGTGG+TGG | + | chr3.1:66922098-66922117 | None:intergenic | 45.0% | |
CAGAACACTAAGATTGGTGG+GGG | - | chr3.1:66922275-66922294 | MS.gene70493:intron | 45.0% | |
CATTTCATTGGCACACCTTG+TGG | - | chr3.1:66923457-66923476 | MS.gene70493:CDS | 45.0% | |
CGCGTGAATCTAATACCACA+AGG | + | chr3.1:66923475-66923494 | None:intergenic | 45.0% | |
GAATAAGGTGGTAGAGAGGT+AGG | + | chr3.1:66921885-66921904 | None:intergenic | 45.0% | |
GAGTGGAAACTAGCATCAAG+AGG | + | chr3.1:66921580-66921599 | None:intergenic | 45.0% | |
GCACAAACACTCCTTGGATT+AGG | + | chr3.1:66922547-66922566 | None:intergenic | 45.0% | |
GCAGAACACTAAGATTGGTG+GGG | - | chr3.1:66922274-66922293 | MS.gene70493:intron | 45.0% | |
GCTACCGATGTTAGGAATTC+GGG | + | chr3.1:66923250-66923269 | None:intergenic | 45.0% | |
GGCAGAACACTAAGATTGGT+GGG | - | chr3.1:66922273-66922292 | MS.gene70493:intron | 45.0% | |
GGCCTAAAAACATCATGAGG+TGG | + | chr3.1:66921921-66921940 | None:intergenic | 45.0% | |
GGCTACCGATGTTAGGAATT+CGG | + | chr3.1:66923251-66923270 | None:intergenic | 45.0% | |
GGTGCAAGTGAATTGAAAGG+TGG | + | chr3.1:66921858-66921877 | None:intergenic | 45.0% | |
GGTGGCCTAAAAACATCATG+AGG | + | chr3.1:66921924-66921943 | None:intergenic | 45.0% | |
GTGCTCCATAGGTGACTATA+TGG | - | chr3.1:66922563-66922582 | MS.gene70493:intron | 45.0% | |
GTGGCAAGTATACTTGAGGT+GGG | + | chr3.1:66922037-66922056 | None:intergenic | 45.0% | |
TATGGAGCACAAACACTCCT+TGG | + | chr3.1:66922553-66922572 | None:intergenic | 45.0% | |
TGGCAGAACACTAAGATTGG+TGG | - | chr3.1:66922272-66922291 | MS.gene70493:intron | 45.0% | |
! | GGGCCTATAACACTTTTAGG+TGG | + | chr3.1:66922017-66922036 | None:intergenic | 45.0% |
! | GGGTTTGGAACAGGTGAATA+AGG | + | chr3.1:66921900-66921919 | None:intergenic | 45.0% |
! | GGTGGGCCTATAACACTTTT+AGG | + | chr3.1:66922020-66922039 | None:intergenic | 45.0% |
! | TCCACTCTTTTCCCTTTGTG+TGG | - | chr3.1:66921593-66921612 | MS.gene70493:intron | 45.0% |
! | TCCTTGGATTAGGTGTGTTC+CGG | + | chr3.1:66922537-66922556 | None:intergenic | 45.0% |
! | TGGCATATGCCTTTGTTGTG+TGG | + | chr3.1:66923186-66923205 | None:intergenic | 45.0% |
! | TGGCTATGGACTATGCTTGT+GGG | - | chr3.1:66922156-66922175 | MS.gene70493:intron | 45.0% |
! | TTATGACTTGAAGGTGGTGG+TGG | + | chr3.1:66922071-66922090 | None:intergenic | 45.0% |
!! | AAGGAGTGTTTGTGCTCCAT+AGG | - | chr3.1:66922552-66922571 | MS.gene70493:intron | 45.0% |
!! | GAATTCGGGTTTTCTCTACC+CGG | + | chr3.1:66923236-66923255 | None:intergenic | 45.0% |
!! | GGGCTTGGAACATGTTTTGA+TGG | + | chr3.1:66921996-66922015 | None:intergenic | 45.0% |
!! | GGTGGTGGATAAACAATAGG+TGG | + | chr3.1:66922056-66922075 | None:intergenic | 45.0% |
!! | GGTGGTGGTGGATAAACAAT+AGG | + | chr3.1:66922059-66922078 | None:intergenic | 45.0% |
!! | TTCACAACGGCGTTGACTAA+TGG | - | chr3.1:66923529-66923548 | MS.gene70493:CDS | 45.0% |
!!! | ACAGTGGTTTTAGGACTTGG+TGG | + | chr3.1:66921945-66921964 | None:intergenic | 45.0% |
!!! | ACATGTTTTGATGGGCTTGG+AGG | + | chr3.1:66921987-66922006 | None:intergenic | 45.0% |
!!! | GGAACATGTTTTGATGGGCT+TGG | + | chr3.1:66921990-66922009 | None:intergenic | 45.0% |
!! | AATTAAAATATATATTTGTT+TGG | + | chr3.1:66923295-66923314 | None:intergenic | 5.0% |
!!! | AATAAAATAATTTATTCTTT+TGG | - | chr3.1:66922985-66923004 | MS.gene70493:intron | 5.0% |
!!! | TATTTTATTATAATATTTAG+TGG | + | chr3.1:66922974-66922993 | None:intergenic | 5.0% |
ACCGGAACACACCTAATCCA+AGG | - | chr3.1:66922533-66922552 | MS.gene70493:intron | 50.0% | |
AGCATGTGCCAACACTGTGT+TGG | + | chr3.1:66922231-66922250 | None:intergenic | 50.0% | |
GATCAGACATCCTGGTACTC+AGG | + | chr3.1:66923410-66923429 | None:intergenic | 50.0% | |
GATTAGGTGTGTTCCGGTGT+CGG | + | chr3.1:66922531-66922550 | None:intergenic | 50.0% | |
GCATGTGCCAACACTGTGTT+GGG | + | chr3.1:66922230-66922249 | None:intergenic | 50.0% | |
GGTGGCAAGTATACTTGAGG+TGG | + | chr3.1:66922038-66922057 | None:intergenic | 50.0% | |
TGGACTATGCTTGTGGGTCT+GGG | - | chr3.1:66922162-66922181 | MS.gene70493:intron | 50.0% | |
! | ATGGACTATGCTTGTGGGTC+TGG | - | chr3.1:66922161-66922180 | MS.gene70493:intron | 50.0% |
! | CTGGCTATGGACTATGCTTG+TGG | - | chr3.1:66922155-66922174 | MS.gene70493:intron | 50.0% |
! | GGCTGGAAGCATATCCCATT+AGG | + | chr3.1:66922209-66922228 | None:intergenic | 50.0% |
! | TCATGAGGTGGGTTTGGAAC+AGG | + | chr3.1:66921909-66921928 | None:intergenic | 50.0% |
!!! | GTGGTTTTAGGACTTGGTGG+TGG | + | chr3.1:66921942-66921961 | None:intergenic | 50.0% |
!!! | TGTTTTGATGGGCTTGGAGG+TGG | + | chr3.1:66921984-66922003 | None:intergenic | 50.0% |
ATCGGACGGCTACCGATGTT+AGG | + | chr3.1:66923258-66923277 | None:intergenic | 55.0% | |
CTTCCAGCCCAACACAGTGT+TGG | - | chr3.1:66922220-66922239 | MS.gene70493:intron | 55.0% | |
GGACTATGCTTGTGGGTCTG+GGG | - | chr3.1:66922163-66922182 | MS.gene70493:intron | 55.0% | |
GGTGGAAGGGGTTGAGAAGA+AGG | + | chr3.1:66921840-66921859 | None:intergenic | 55.0% | |
GGTGGTAGAGAGGTAGGTTG+TGG | + | chr3.1:66921879-66921898 | None:intergenic | 55.0% | |
TGGCGGCGACATTGTAACAG+TGG | + | chr3.1:66921961-66921980 | None:intergenic | 55.0% | |
TGTGTGCTTCCCTGAGTACC+AGG | - | chr3.1:66923397-66923416 | MS.gene70493:CDS | 55.0% | |
! | TCGGGTTTTCTCTACCCGGA+TGG | + | chr3.1:66923232-66923251 | None:intergenic | 55.0% |
!! | TTTGATGGGCTTGGAGGTGG+TGG | + | chr3.1:66921981-66922000 | None:intergenic | 55.0% |
!!! | GGGGGCACTTGTGATTTTGG+TGG | - | chr3.1:66922293-66922312 | MS.gene70493:intron | 55.0% |
!!! | GGTGGGGGCACTTGTGATTT+TGG | - | chr3.1:66922290-66922309 | MS.gene70493:intron | 55.0% |
GGACACTGACACGCCGACAT+CGG | - | chr3.1:66922433-66922452 | MS.gene70493:intron | 60.0% | |
GTGCCAACACTGTGTTGGGC+TGG | + | chr3.1:66922226-66922245 | None:intergenic | 60.0% | |
!! | CACTGACTCGTGTCCGACAC+CGG | - | chr3.1:66922515-66922534 | MS.gene70493:intron | 60.0% |
! | GATGGGCTTGGAGGTGGTGG+CGG | + | chr3.1:66921978-66921997 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 66921527 | 66923829 | 66921527 | ID=MS.gene70493 |
chr3.1 | mRNA | 66921527 | 66923829 | 66921527 | ID=MS.gene70493.t1;Parent=MS.gene70493 |
chr3.1 | exon | 66923742 | 66923829 | 66923742 | ID=MS.gene70493.t1.exon1;Parent=MS.gene70493.t1 |
chr3.1 | CDS | 66923742 | 66923829 | 66923742 | ID=cds.MS.gene70493.t1;Parent=MS.gene70493.t1 |
chr3.1 | exon | 66923012 | 66923647 | 66923012 | ID=MS.gene70493.t1.exon2;Parent=MS.gene70493.t1 |
chr3.1 | CDS | 66923012 | 66923647 | 66923012 | ID=cds.MS.gene70493.t1;Parent=MS.gene70493.t1 |
chr3.1 | exon | 66921527 | 66921558 | 66921527 | ID=MS.gene70493.t1.exon3;Parent=MS.gene70493.t1 |
chr3.1 | CDS | 66921527 | 66921558 | 66921527 | ID=cds.MS.gene70493.t1;Parent=MS.gene70493.t1 |
Gene Sequence |
Protein sequence |