Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70706.t1 | XP_013460983.1 | 95.3 | 752 | 33 | 2 | 1 | 751 | 1 | 751 | 0.00E+00 | 1471.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70706.t1 | Q94A08 | 50.5 | 770 | 336 | 8 | 1 | 738 | 1 | 757 | 1.5e-234 | 813.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70706.t1 | A0A072UZM9 | 95.3 | 752 | 33 | 2 | 1 | 751 | 1 | 751 | 0.0e+00 | 1471.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050463 | MS.gene70706 | 0.868486 | 6.30E-66 | -1.69E-46 |
| MS.gene050528 | MS.gene70706 | 0.865553 | 5.43E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70706.t1 | MTR_3g075510 | 94.415 | 752 | 40 | 2 | 1 | 751 | 1 | 751 | 0.0 | 1456 |
| MS.gene70706.t1 | MTR_3g075510 | 94.322 | 634 | 34 | 2 | 1 | 633 | 1 | 633 | 0.0 | 1221 |
| MS.gene70706.t1 | MTR_1g052515 | 51.075 | 744 | 338 | 6 | 1 | 738 | 1 | 724 | 0.0 | 745 |
| MS.gene70706.t1 | MTR_7g091880 | 48.438 | 768 | 352 | 7 | 1 | 738 | 1 | 754 | 0.0 | 736 |
| MS.gene70706.t1 | MTR_5g096820 | 47.340 | 752 | 374 | 8 | 1 | 738 | 1 | 744 | 0.0 | 716 |
| MS.gene70706.t1 | MTR_4g115330 | 45.007 | 751 | 354 | 12 | 1 | 739 | 76 | 779 | 0.0 | 648 |
| MS.gene70706.t1 | MTR_5g096820 | 47.900 | 643 | 317 | 6 | 1 | 630 | 1 | 638 | 0.0 | 645 |
| MS.gene70706.t1 | MTR_4g115330 | 46.696 | 681 | 330 | 9 | 65 | 739 | 1 | 654 | 0.0 | 639 |
| MS.gene70706.t1 | MTR_3g077280 | 37.628 | 784 | 421 | 17 | 9 | 751 | 30 | 786 | 4.24e-175 | 522 |
| MS.gene70706.t1 | MTR_4g105250 | 36.086 | 787 | 429 | 17 | 8 | 751 | 23 | 778 | 5.28e-167 | 501 |
| MS.gene70706.t1 | MTR_6g004880 | 36.082 | 776 | 438 | 14 | 9 | 751 | 37 | 787 | 2.24e-164 | 494 |
| MS.gene70706.t1 | MTR_1g097450 | 32.270 | 815 | 419 | 21 | 23 | 738 | 58 | 838 | 3.11e-125 | 394 |
| MS.gene70706.t1 | MTR_7g106910 | 37.444 | 446 | 256 | 8 | 307 | 738 | 407 | 843 | 6.52e-87 | 293 |
| MS.gene70706.t1 | MTR_7g106910 | 34.091 | 264 | 149 | 3 | 23 | 280 | 54 | 298 | 4.66e-41 | 162 |
| MS.gene70706.t1 | MTR_8g088020 | 34.340 | 530 | 304 | 12 | 235 | 738 | 312 | 823 | 2.02e-83 | 283 |
| MS.gene70706.t1 | MTR_8g088020 | 32.959 | 267 | 148 | 4 | 23 | 280 | 53 | 297 | 1.57e-40 | 160 |
| MS.gene70706.t1 | MTR_7g109790 | 35.821 | 335 | 203 | 6 | 406 | 733 | 9 | 338 | 4.76e-58 | 201 |
| MS.gene70706.t1 | MTR_5g065520 | 41.631 | 233 | 94 | 6 | 510 | 738 | 213 | 407 | 5.30e-41 | 155 |
| MS.gene70706.t1 | MTR_7g055620 | 33.333 | 105 | 67 | 1 | 81 | 185 | 225 | 326 | 4.34e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70706.t1 | AT3G57520 | 50.519 | 770 | 336 | 8 | 1 | 738 | 1 | 757 | 0.0 | 813 |
| MS.gene70706.t1 | AT3G57520 | 52.474 | 667 | 294 | 6 | 1 | 657 | 1 | 654 | 0.0 | 748 |
| MS.gene70706.t1 | AT1G55740 | 49.069 | 752 | 356 | 8 | 1 | 738 | 1 | 739 | 0.0 | 702 |
| MS.gene70706.t1 | AT5G20250 | 45.539 | 751 | 379 | 12 | 1 | 739 | 1 | 733 | 0.0 | 661 |
| MS.gene70706.t1 | AT5G20250 | 45.539 | 751 | 379 | 12 | 1 | 739 | 1 | 733 | 0.0 | 661 |
| MS.gene70706.t1 | AT5G20250 | 45.539 | 751 | 379 | 12 | 1 | 739 | 1 | 733 | 0.0 | 661 |
| MS.gene70706.t1 | AT5G20250 | 45.539 | 751 | 379 | 13 | 1 | 739 | 96 | 828 | 0.0 | 661 |
| MS.gene70706.t1 | AT3G57520 | 53.968 | 567 | 243 | 4 | 1 | 562 | 1 | 554 | 0.0 | 654 |
| MS.gene70706.t1 | AT5G40390 | 37.056 | 788 | 425 | 16 | 8 | 751 | 23 | 783 | 6.43e-170 | 508 |
| MS.gene70706.t1 | AT4G01970 | 36.123 | 454 | 263 | 13 | 303 | 736 | 412 | 858 | 8.47e-84 | 285 |
| MS.gene70706.t1 | AT4G01970 | 35.088 | 285 | 142 | 4 | 21 | 281 | 49 | 314 | 4.63e-44 | 171 |
| MS.gene70706.t1 | AT4G01970 | 36.123 | 454 | 263 | 13 | 303 | 736 | 459 | 905 | 2.48e-83 | 284 |
| MS.gene70706.t1 | AT4G01970 | 35.088 | 285 | 142 | 4 | 21 | 281 | 96 | 361 | 6.85e-44 | 171 |
Find 173 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTACAGTCTGCTGAAAATT+TGG | 0.133304 | 3.3:-65176275 | MS.gene70706:intron |
| TACTCGAGATTGTTTGTTTC+AGG | 0.138623 | 3.3:-65176408 | MS.gene70706:CDS |
| CTAATGTTTCTATCAAATTT+TGG | 0.150455 | 3.3:+65177169 | None:intergenic |
| CATTCTCTTCTTGCCTGTTT+TGG | 0.169995 | 3.3:-65178466 | MS.gene70706:CDS |
| CCGACACACTTAACCATTTC+AGG | 0.207056 | 3.3:-65176168 | MS.gene70706:CDS |
| GCCTTCACCATCAAGTTTAA+TGG | 0.214336 | 3.3:+65175335 | None:intergenic |
| TTTCTGTCATCTTGAAAATA+AGG | 0.241361 | 3.3:-65178064 | MS.gene70706:CDS |
| CCTGTACATCTTGATTTGTT+TGG | 0.257621 | 3.3:-65178036 | MS.gene70706:CDS |
| ACAACTCTGATTCAATTTAC+AGG | 0.265456 | 3.3:-65177038 | MS.gene70706:intron |
| GCATGCTTTAGCTGGTTATT+GGG | 0.271441 | 3.3:-65177412 | MS.gene70706:CDS |
| AAGAGGTTGCTGGTGAAAAT+TGG | 0.280176 | 3.3:-65176113 | MS.gene70706:CDS |
| CATATGTATAAACAGGTATT+TGG | 0.294074 | 3.3:-65175582 | MS.gene70706:intron |
| GGCATGCTTTAGCTGGTTAT+TGG | 0.294226 | 3.3:-65177413 | MS.gene70706:CDS |
| GGCAGAGGATGTGGCCGATT+TGG | 0.301018 | 3.3:-65175444 | MS.gene70706:CDS |
| TTCCTAATGACATAGGATAT+TGG | 0.303139 | 3.3:-65178103 | MS.gene70706:intron |
| GTTGTTTCACCTGTTTCAGC+TGG | 0.311923 | 3.3:-65178966 | MS.gene70706:CDS |
| CTTTATTTAGAGTCAAAATA+TGG | 0.313807 | 3.3:-65178635 | MS.gene70706:CDS |
| GTCTACAAACATGACTATTT+CGG | 0.314200 | 3.3:-65179063 | None:intergenic |
| TACTGGGTTCCTTCAATTAT+CGG | 0.317199 | 3.3:+65177746 | None:intergenic |
| AGGCACTCGTCCTTCACTTT+AGG | 0.317254 | 3.3:+65179035 | None:intergenic |
| GAGGGACATTTGTGAGAATC+AGG | 0.326336 | 3.3:+65178997 | None:intergenic |
| ATCCAGTAATGGATGGTAAA+AGG | 0.326549 | 3.3:-65176385 | MS.gene70706:intron |
| AACAAGGCTGATAGACATTA+AGG | 0.327395 | 3.3:-65177639 | MS.gene70706:CDS |
| CAAAATTTGATAGAAACATT+AGG | 0.332651 | 3.3:-65177168 | MS.gene70706:CDS |
| GAGGCAGTATTTGTAAATTC+AGG | 0.334499 | 3.3:-65178243 | MS.gene70706:CDS |
| TTGATAGAAACATTAGGTTC+AGG | 0.347566 | 3.3:-65177162 | MS.gene70706:CDS |
| TTGCTTGACATGTACAATTC+AGG | 0.347876 | 3.3:-65175531 | MS.gene70706:CDS |
| CATATGCAATTTGCGCCAAT+TGG | 0.348061 | 3.3:-65175555 | MS.gene70706:CDS |
| GTGGTTTCCGATGGTTTCAT+TGG | 0.349098 | 3.3:+65176192 | None:intergenic |
| TATATACAGTATCTCCAATC+AGG | 0.361816 | 3.3:-65175693 | MS.gene70706:CDS |
| AACATTCAAACCTGCATTGA+AGG | 0.378084 | 3.3:+65176068 | None:intergenic |
| GAATCTTTGATTAGCTCAAA+TGG | 0.384220 | 3.3:+65178213 | None:intergenic |
| TAATCCATCTTCAGAGTTGT+AGG | 0.389057 | 3.3:+65175362 | None:intergenic |
| AACCACTTTCAACGCAGAAT+TGG | 0.394094 | 3.3:+65178397 | None:intergenic |
| GAGAGATATTTGTGCCAGAC+TGG | 0.399133 | 3.3:-65176810 | MS.gene70706:CDS |
| GTGGAACCAGCTGACTGAAT+TGG | 0.406736 | 3.3:+65177333 | None:intergenic |
| ACATGTAAGGTTTGAAATGT+TGG | 0.411578 | 3.3:+65176865 | None:intergenic |
| GTTTGAAATGTTGGTTCCCT+TGG | 0.415913 | 3.3:+65176874 | None:intergenic |
| TTGGCCAGCTTCCTGCTCCT+TGG | 0.418002 | 3.3:+65176211 | None:intergenic |
| AATAAGCTGACTGGGGTCAT+AGG | 0.419910 | 3.3:-65176246 | MS.gene70706:CDS |
| TGTCCATGGCTATATCTCTA+AGG | 0.420570 | 3.3:+65177304 | None:intergenic |
| TTACTGACCATTAAACTTGA+TGG | 0.421279 | 3.3:-65175342 | MS.gene70706:CDS |
| CATGCAGCAGCAAGAGCAAT+AGG | 0.421395 | 3.3:-65176654 | MS.gene70706:CDS |
| AGATATAGCCATGGACAGCC+TGG | 0.423263 | 3.3:-65177298 | MS.gene70706:CDS |
| AAGTTTATCATCGTTGATGA+TGG | 0.424891 | 3.3:-65177809 | MS.gene70706:CDS |
| AGTGAAGGACGAGTGCCTTA+TGG | 0.427110 | 3.3:-65179030 | MS.gene70706:CDS |
| CGAAAGGCTCCATCCAAAAC+AGG | 0.427176 | 3.3:+65178453 | None:intergenic |
| GTCTTTAATTGCCAAGGAGC+AGG | 0.431429 | 3.3:-65176222 | MS.gene70706:CDS |
| TAGAAGAATTGTCCTGCATA+AGG | 0.432028 | 3.3:-65175500 | MS.gene70706:CDS |
| AAAGCAGACCCAGCTGAAAC+AGG | 0.434640 | 3.3:+65178957 | None:intergenic |
| TGAATTGGATATACAAGCTT+CGG | 0.437132 | 3.3:+65177348 | None:intergenic |
| ATTTGTTTGGATGGTGCACT+TGG | 0.437449 | 3.3:-65178023 | MS.gene70706:CDS |
| AGGAAAATTAGAAGTATCCT+TGG | 0.441630 | 3.3:-65175734 | MS.gene70706:CDS |
| GAGTTTCTTGAAGAGGTTGC+TGG | 0.444364 | 3.3:-65176123 | MS.gene70706:CDS |
| GTGGTTGTGCAGTATATGTT+AGG | 0.445136 | 3.3:-65176632 | MS.gene70706:intron |
| GTCATAACACCAACCCTGAT+TGG | 0.447307 | 3.3:+65175679 | None:intergenic |
| TGATAGAAACATTAGGTTCA+GGG | 0.448878 | 3.3:-65177161 | MS.gene70706:CDS |
| ATTCAGTCAGCTGGTTCCAC+AGG | 0.456336 | 3.3:-65177330 | MS.gene70706:CDS |
| AAGAAGCTAGTACTACCTAA+TGG | 0.457727 | 3.3:-65176464 | MS.gene70706:CDS |
| CTTGCTAGCTGTGGCGTCGA+TGG | 0.462315 | 3.3:-65177207 | MS.gene70706:CDS |
| TACATCTTGATTTGTTTGGA+TGG | 0.464444 | 3.3:-65178032 | MS.gene70706:CDS |
| AGCTACCGACGCAACATGTA+AGG | 0.465646 | 3.3:+65176852 | None:intergenic |
| GCTCTCAAGACTGATCCATT+AGG | 0.466280 | 3.3:+65176449 | None:intergenic |
| TACATGTGGCATGCTTTAGC+TGG | 0.471549 | 3.3:-65177420 | MS.gene70706:CDS |
| TTGTTTCACCTGTTTCAGCT+GGG | 0.471827 | 3.3:-65178965 | MS.gene70706:CDS |
| GTATATCCAATTCAGTCAGC+TGG | 0.476978 | 3.3:-65177339 | MS.gene70706:CDS |
| GACGTGTTTCATTAACAAAA+CGG | 0.477430 | 3.3:-65177131 | MS.gene70706:CDS |
| ATTGCCAAGGAGCAGGAAGC+TGG | 0.478211 | 3.3:-65176215 | MS.gene70706:CDS |
| AGGCAGTATTTGTAAATTCA+GGG | 0.482966 | 3.3:-65178242 | MS.gene70706:CDS |
| CCAAACAAATCAAGATGTAC+AGG | 0.483982 | 3.3:+65178036 | None:intergenic |
| ATACTATATGCCTTCAATGC+AGG | 0.489268 | 3.3:-65176078 | MS.gene70706:intron |
| CTATTGCTCTTGCTGCTGCA+TGG | 0.489450 | 3.3:+65176655 | None:intergenic |
| TCAGGTTGCCCCTCACCATA+AGG | 0.490694 | 3.3:+65179015 | None:intergenic |
| CATTGGAGTACGCTCCAAAT+CGG | 0.495713 | 3.3:+65175430 | None:intergenic |
| AAGTTGCTTGGTGGACATGC+AGG | 0.496836 | 3.3:-65175397 | MS.gene70706:CDS |
| ACATGACGGGAACTAGGAAT+AGG | 0.497061 | 3.3:+65178918 | None:intergenic |
| AGAAGCAATTGAGTTTCCAT+TGG | 0.497684 | 3.3:+65178573 | None:intergenic |
| CTCCAATTCTGCGTTGAAAG+TGG | 0.497807 | 3.3:-65178399 | MS.gene70706:intron |
| ACTTGGAACATGTCCCAGTC+TGG | 0.497856 | 3.3:+65176796 | None:intergenic |
| GTCTTGAGAGCAAGATATGC+TGG | 0.497867 | 3.3:-65176437 | MS.gene70706:CDS |
| TCTTCACCCTCGGCACTCTC+CGG | 0.499147 | 3.3:-65178896 | MS.gene70706:intron |
| GCCTTTCGCGCAACTTTGCA+AGG | 0.499278 | 3.3:-65178438 | MS.gene70706:CDS |
| CATGCTTTAGCTGGTTATTG+GGG | 0.500822 | 3.3:-65177411 | MS.gene70706:CDS |
| TCCCGTCATGTCTTCACCCT+CGG | 0.502127 | 3.3:-65178906 | MS.gene70706:CDS |
| AACATCAAAGGCAGAGGATG+TGG | 0.504719 | 3.3:-65175453 | MS.gene70706:CDS |
| TCCTTGCAAAGTTGCGCGAA+AGG | 0.505821 | 3.3:+65178437 | None:intergenic |
| GTGAAGACATGACGGGAACT+AGG | 0.507395 | 3.3:+65178912 | None:intergenic |
| GAGATTGTTGCAAGAACTGT+TGG | 0.507789 | 3.3:+65177589 | None:intergenic |
| TTTGTTTCAGGATCCAGTAA+TGG | 0.516931 | 3.3:-65176396 | MS.gene70706:CDS |
| TCATCAACGATGATAAACTT+TGG | 0.518122 | 3.3:+65177812 | None:intergenic |
| TGCAGTAGCAAGAGCATCTG+AGG | 0.518388 | 3.3:-65176905 | MS.gene70706:CDS |
| ATTTGCAGCATCCCTTATGC+AGG | 0.524518 | 3.3:+65175488 | None:intergenic |
| GCTTTAGCTGGTTATTGGGG+AGG | 0.526230 | 3.3:-65177408 | MS.gene70706:CDS |
| GGAACTTGAATAAGCTGACT+GGG | 0.528230 | 3.3:-65176254 | MS.gene70706:CDS |
| AGAAGAATTGTCCTGCATAA+GGG | 0.528389 | 3.3:-65175499 | MS.gene70706:CDS |
| GGAAACTCAATTGCTTCTAG+TGG | 0.531099 | 3.3:-65178568 | MS.gene70706:CDS |
| TACATGTCAAGCAATCCAAT+TGG | 0.532755 | 3.3:+65175540 | None:intergenic |
| GAAGGCGAACCGATAATTGA+AGG | 0.534207 | 3.3:-65177755 | MS.gene70706:CDS |
| AATTTACAAATACTGCCTCA+TGG | 0.536522 | 3.3:+65178247 | None:intergenic |
| GGATTGTGAAGTTTGAACAT+AGG | 0.539175 | 3.3:+65178269 | None:intergenic |
| GGTGGATGATACCACGTGTT+GGG | 0.540503 | 3.3:-65178614 | MS.gene70706:CDS |
| TGGAACTTGAATAAGCTGAC+TGG | 0.542627 | 3.3:-65176255 | MS.gene70706:CDS |
| CTTGGTGGACATGCAGGAGA+AGG | 0.542712 | 3.3:-65175391 | MS.gene70706:CDS |
| TTATCATCGTTGATGATGGA+TGG | 0.546645 | 3.3:-65177805 | MS.gene70706:CDS |
| CACAGTTATCTTGCTAGCTG+TGG | 0.548683 | 3.3:-65177216 | MS.gene70706:CDS |
| TCAAGAAACTCAACATCAAG+TGG | 0.552805 | 3.3:+65176135 | None:intergenic |
| ATTTACAAATACTGCCTCAT+GGG | 0.552987 | 3.3:+65178248 | None:intergenic |
| TGATAGAGTCAATAAAATCA+TGG | 0.554811 | 3.3:+65177567 | None:intergenic |
| AAATCCACAAGGAATAAAAG+AGG | 0.555557 | 3.3:-65177980 | MS.gene70706:CDS |
| AATTTGAAGTTCAGAAGTGA+TGG | 0.558269 | 3.3:-65177614 | MS.gene70706:CDS |
| TTTCAGGATCCAGTAATGGA+TGG | 0.559262 | 3.3:-65176392 | MS.gene70706:CDS |
| TTCCATTGGAACATCGCTTG+CGG | 0.560083 | 3.3:+65178587 | None:intergenic |
| GGACGAGTGCCTTATGGTGA+GGG | 0.560118 | 3.3:-65179024 | MS.gene70706:CDS |
| TGTTAGACCGAAAAGTTGCT+TGG | 0.562615 | 3.3:-65175409 | MS.gene70706:CDS |
| ATGCATTACAGTGATAAGCC+TGG | 0.563441 | 3.3:-65176509 | MS.gene70706:intron |
| ATCCGCAAGCGATGTTCCAA+TGG | 0.563712 | 3.3:-65178589 | MS.gene70706:CDS |
| TTGATGGTGAAGGCAACTCA+AGG | 0.563996 | 3.3:-65175326 | MS.gene70706:CDS |
| CCTGAAATGGTTAAGTGTGT+CGG | 0.565716 | 3.3:+65176168 | None:intergenic |
| TTCGGTTGTACCTAAAGTGA+AGG | 0.566143 | 3.3:-65179045 | MS.gene70706:CDS |
| TGTGTCGGTGTGGTTTCCGA+TGG | 0.566607 | 3.3:+65176183 | None:intergenic |
| TGATGTTGAGTTTCTTGAAG+AGG | 0.567441 | 3.3:-65176130 | MS.gene70706:CDS |
| GACATAGAATTTGTATTCTG+AGG | 0.570441 | 3.3:-65175303 | None:intergenic |
| CTTTCCAAGCTGCCTAGTAG+AGG | 0.571601 | 3.3:-65175754 | MS.gene70706:CDS |
| TGCCGAGGGTGAAGACATGA+CGG | 0.575394 | 3.3:+65178904 | None:intergenic |
| TAGACCGAAAAGTTGCTTGG+TGG | 0.578729 | 3.3:-65175406 | MS.gene70706:CDS |
| AGAGATATTTGTGCCAGACT+GGG | 0.590054 | 3.3:-65176809 | MS.gene70706:CDS |
| ATCTGAGGATTTCATGCCAA+GGG | 0.592867 | 3.3:-65176890 | MS.gene70706:CDS |
| TGCACAATAGTAAACATCAA+AGG | 0.596912 | 3.3:-65175465 | MS.gene70706:CDS |
| GACTCACCGGAGAGTGCCGA+GGG | 0.597740 | 3.3:+65178890 | None:intergenic |
| TTTGTTTGGATGGTGCACTT+GGG | 0.600213 | 3.3:-65178022 | MS.gene70706:CDS |
| TGTGAGACATGCAACAAATG+AGG | 0.600971 | 3.3:+65177058 | None:intergenic |
| GAATAAAAGAGGGCATTCAA+AGG | 0.601533 | 3.3:-65177969 | MS.gene70706:intron |
| TATTTAGAGTCAAAATATGG+TGG | 0.602078 | 3.3:-65178632 | MS.gene70706:CDS |
| TTAAACAGTCTCTCAAGTGG+AGG | 0.605758 | 3.3:-65177842 | MS.gene70706:intron |
| GAAACATTAGGTTCAGGGTG+CGG | 0.606140 | 3.3:-65177156 | MS.gene70706:CDS |
| ACATTAGGTTCAGGGTGCGG+TGG | 0.606763 | 3.3:-65177153 | MS.gene70706:CDS |
| ATAGTAAACATCAAAGGCAG+AGG | 0.608568 | 3.3:-65175459 | MS.gene70706:CDS |
| AACAGGCAAGAAGAGAATGT+AGG | 0.609281 | 3.3:+65178470 | None:intergenic |
| AGACTCACCGGAGAGTGCCG+AGG | 0.610924 | 3.3:+65178889 | None:intergenic |
| ACCATTAAACTTGATGGTGA+AGG | 0.612381 | 3.3:-65175336 | MS.gene70706:CDS |
| TTCACATTGAAGAGTCTCCA+AGG | 0.612594 | 3.3:+65175717 | None:intergenic |
| TTTGTAGAGCAAGCACGAGA+CGG | 0.614843 | 3.3:-65176685 | MS.gene70706:intron |
| AGGACGAGTGCCTTATGGTG+AGG | 0.621258 | 3.3:-65179025 | MS.gene70706:CDS |
| AATATGTTAGGTTTGCAACA+AGG | 0.621827 | 3.3:-65177655 | MS.gene70706:intron |
| ATATACAGTATCTCCAATCA+GGG | 0.622646 | 3.3:-65175692 | MS.gene70706:intron |
| GGCAGTATTTGTAAATTCAG+GGG | 0.622919 | 3.3:-65178241 | MS.gene70706:CDS |
| ATAGGCGTCTTTAATTGCCA+AGG | 0.624613 | 3.3:-65176228 | MS.gene70706:CDS |
| TTCAGTCAGCTGGTTCCACA+GGG | 0.625466 | 3.3:-65177329 | MS.gene70706:CDS |
| AATCCACAAGGAATAAAAGA+GGG | 0.625484 | 3.3:-65177979 | MS.gene70706:CDS |
| GTTGCTGGTGAAAATTGGAA+TGG | 0.626737 | 3.3:-65176108 | MS.gene70706:CDS |
| GCCGAGGGTGAAGACATGAC+GGG | 0.627661 | 3.3:+65178905 | None:intergenic |
| TCCGCAGATACGTTTACATG+TGG | 0.628225 | 3.3:-65177434 | MS.gene70706:intron |
| GAATTGGAGCTCGTTTAACG+CGG | 0.628314 | 3.3:+65178413 | None:intergenic |
| CATTAGAGACATCAATAGCA+AGG | 0.628449 | 3.3:-65177098 | MS.gene70706:CDS |
| CATCTGAGGATTTCATGCCA+AGG | 0.631175 | 3.3:-65176891 | MS.gene70706:CDS |
| AAATTAAACAGTCTCTCAAG+TGG | 0.633332 | 3.3:-65177845 | MS.gene70706:intron |
| ACAAACAATCTCGAGTAGGA+CGG | 0.638323 | 3.3:+65176414 | None:intergenic |
| CTTGACATGTACAATTCAGG+AGG | 0.640277 | 3.3:-65175528 | MS.gene70706:CDS |
| CTTGCGGATTTCCCAACACG+TGG | 0.644530 | 3.3:+65178603 | None:intergenic |
| TGAAACAAACAATCTCGAGT+AGG | 0.658675 | 3.3:+65176410 | None:intergenic |
| TGATGGTGAAGGCAACTCAA+GGG | 0.660992 | 3.3:-65175325 | MS.gene70706:CDS |
| TCAAACCTTACATGTTGCGT+CGG | 0.663563 | 3.3:-65176857 | MS.gene70706:CDS |
| AAGCTGGCCAATGAAACCAT+CGG | 0.665066 | 3.3:-65176199 | MS.gene70706:CDS |
| GACGAGTGCCTTATGGTGAG+GGG | 0.667610 | 3.3:-65179023 | MS.gene70706:CDS |
| TACACTAAAGTAAATCCACA+AGG | 0.677457 | 3.3:-65177991 | MS.gene70706:CDS |
| TGGTGGATGATACCACGTGT+TGG | 0.678677 | 3.3:-65178615 | MS.gene70706:CDS |
| GAACCTTAGAGATATAGCCA+TGG | 0.685161 | 3.3:-65177307 | MS.gene70706:CDS |
| AGGATATTGGAGAAACACAA+AGG | 0.687687 | 3.3:-65178090 | MS.gene70706:CDS |
| AATGGTTAAGTGTGTCGGTG+TGG | 0.693578 | 3.3:+65176173 | None:intergenic |
| GAACTTGAATAAGCTGACTG+GGG | 0.696242 | 3.3:-65176253 | MS.gene70706:CDS |
| GCAGCAGCAAGAGCAATAGG+TGG | 0.714549 | 3.3:-65176651 | MS.gene70706:CDS |
| TCAAACTTCACAATCCCATG+AGG | 0.752833 | 3.3:-65178262 | MS.gene70706:CDS |
| TATATCTCTAAGGTTCCCTG+TGG | 0.766010 | 3.3:+65177314 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAATTAATACAATTAAAA+AGG | + | chr3.3:65177804-65177823 | None:intergenic | 10.0% |
| !! | ATAAGCACTTAAATATATAA+AGG | - | chr3.3:65178506-65178525 | MS.gene70706:CDS | 15.0% |
| !! | TAAGCACTTAAATATATAAA+GGG | - | chr3.3:65178507-65178526 | MS.gene70706:CDS | 15.0% |
| !! | TGTATTTAAAAAAATATGCA+GGG | - | chr3.3:65175685-65175704 | MS.gene70706:intron | 15.0% |
| !!! | TAAAAGTCATAAAATTTTGA+TGG | + | chr3.3:65177112-65177131 | None:intergenic | 15.0% |
| !!! | TACTTATATAAACACTTTTA+AGG | - | chr3.3:65178353-65178372 | MS.gene70706:intron | 15.0% |
| !!! | TTTTATAACATTATTAGACT+TGG | + | chr3.3:65178750-65178769 | None:intergenic | 15.0% |
| !! | AGGTTTGAATGTTAAATTTA+GGG | - | chr3.3:65178300-65178319 | MS.gene70706:intron | 20.0% |
| !! | ATGTTAACATATGTATAAAC+AGG | - | chr3.3:65178769-65178788 | MS.gene70706:intron | 20.0% |
| !! | CAAAATTTGATAGAAACATT+AGG | - | chr3.3:65177190-65177209 | MS.gene70706:CDS | 20.0% |
| !! | CTCATTGAATTAATATACTA+AGG | + | chr3.3:65175640-65175659 | None:intergenic | 20.0% |
| !! | GTAAAGAATCGATAATAATA+TGG | + | chr3.3:65178068-65178087 | None:intergenic | 20.0% |
| !! | GTATTTAAAAAAATATGCAG+GGG | - | chr3.3:65175686-65175705 | MS.gene70706:intron | 20.0% |
| !! | GTGTATTTAAAAAAATATGC+AGG | - | chr3.3:65175684-65175703 | MS.gene70706:intron | 20.0% |
| !! | TTCATTATTAGCTAACTTAT+CGG | + | chr3.3:65175571-65175590 | None:intergenic | 20.0% |
| !!! | ATCAAAGTTTTCAAATTTAC+AGG | + | chr3.3:65176474-65176493 | None:intergenic | 20.0% |
| !!! | ATTTTTATTCCTAATGACAT+AGG | - | chr3.3:65176248-65176267 | MS.gene70706:CDS | 20.0% |
| !!! | CACATCTTTTATAATATGTT+AGG | - | chr3.3:65176691-65176710 | MS.gene70706:intron | 20.0% |
| !!! | CTAATGTTTCTATCAAATTT+TGG | + | chr3.3:65177192-65177211 | None:intergenic | 20.0% |
| !!! | CTTTATTTAGAGTCAAAATA+TGG | - | chr3.3:65175723-65175742 | MS.gene70706:CDS | 20.0% |
| !!! | TACAATGAATTTTTCAAAGA+AGG | - | chr3.3:65176585-65176604 | MS.gene70706:intron | 20.0% |
| !!! | TACAATTAAAAAGGTTTTTG+CGG | + | chr3.3:65177795-65177814 | None:intergenic | 20.0% |
| ! | AATGAGACAAGAATATTACT+TGG | + | chr3.3:65177582-65177601 | None:intergenic | 25.0% |
| ! | ATAAGCTGAAAACAACTTAT+AGG | + | chr3.3:65178416-65178435 | None:intergenic | 25.0% |
| ! | ATCAAGAATTCTATCAGATT+TGG | + | chr3.3:65177759-65177778 | None:intergenic | 25.0% |
| ! | ATGAAAATTGATCAGAAAAG+TGG | + | chr3.3:65178032-65178051 | None:intergenic | 25.0% |
| ! | CAATTGAGAGTAATGAAAAA+AGG | + | chr3.3:65177417-65177436 | None:intergenic | 25.0% |
| ! | CACAATGTTTATTAGAGTTT+AGG | - | chr3.3:65176210-65176229 | MS.gene70706:CDS | 25.0% |
| ! | CAGGTTTGAATGTTAAATTT+AGG | - | chr3.3:65178299-65178318 | MS.gene70706:intron | 25.0% |
| ! | CATATGTATAAACAGGTATT+TGG | - | chr3.3:65178776-65178795 | MS.gene70706:intron | 25.0% |
| ! | CTTAAGTTAATGAGAATCAT+GGG | + | chr3.3:65176878-65176897 | None:intergenic | 25.0% |
| ! | TCTTAAGTTAATGAGAATCA+TGG | + | chr3.3:65176879-65176898 | None:intergenic | 25.0% |
| ! | TGATAGAGTCAATAAAATCA+TGG | + | chr3.3:65176794-65176813 | None:intergenic | 25.0% |
| ! | TGTAACTATTTGTCTCTAAA+TGG | - | chr3.3:65178006-65178025 | MS.gene70706:CDS | 25.0% |
| ! | TTTCTGTCATCTTGAAAATA+AGG | - | chr3.3:65176294-65176313 | MS.gene70706:intron | 25.0% |
| !! | ACAATTAAAAAGGTTTTTGC+GGG | + | chr3.3:65177794-65177813 | None:intergenic | 25.0% |
| !! | TATTTAGAGTCAAAATATGG+TGG | - | chr3.3:65175726-65175745 | MS.gene70706:CDS | 25.0% |
| !!! | ATTTTAAAATCATGATTGCC+AGG | + | chr3.3:65177870-65177889 | None:intergenic | 25.0% |
| !!! | CTTATTTTCTTAAGCTTTTC+AGG | - | chr3.3:65178431-65178450 | MS.gene70706:CDS | 25.0% |
| !!! | CTTTGATTTTTGAATGCTTT+AGG | - | chr3.3:65176061-65176080 | MS.gene70706:intron | 25.0% |
| AAAAAATATGCAGGGGATAT+AGG | - | chr3.3:65175693-65175712 | MS.gene70706:CDS | 30.0% | |
| AAATCCACAAGGAATAAAAG+AGG | - | chr3.3:65176378-65176397 | MS.gene70706:intron | 30.0% | |
| AAATTAAACAGTCTCTCAAG+TGG | - | chr3.3:65176513-65176532 | MS.gene70706:intron | 30.0% | |
| AAGGATGATTCATCAGAAAA+AGG | + | chr3.3:65177398-65177417 | None:intergenic | 30.0% | |
| AATATGTTAGGTTTGCAACA+AGG | - | chr3.3:65176703-65176722 | MS.gene70706:intron | 30.0% | |
| AATCCACAAGGAATAAAAGA+GGG | - | chr3.3:65176379-65176398 | MS.gene70706:intron | 30.0% | |
| AATTGAAATGAGAGACTTAC+TGG | + | chr3.3:65176632-65176651 | None:intergenic | 30.0% | |
| AATTTACAAATACTGCCTCA+TGG | + | chr3.3:65176114-65176133 | None:intergenic | 30.0% | |
| AATTTACAGGCTTATCACAT+AGG | + | chr3.3:65176461-65176480 | None:intergenic | 30.0% | |
| ACAACTCTGATTCAATTTAC+AGG | - | chr3.3:65177320-65177339 | MS.gene70706:CDS | 30.0% | |
| AGGCAGTATTTGTAAATTCA+GGG | - | chr3.3:65176116-65176135 | MS.gene70706:CDS | 30.0% | |
| ATAGGCTTCTTATTGAGATA+AGG | + | chr3.3:65176844-65176863 | None:intergenic | 30.0% | |
| ATATACAGTATCTCCAATCA+GGG | - | chr3.3:65178666-65178685 | MS.gene70706:intron | 30.0% | |
| ATTGAAATGAGAGACTTACT+GGG | + | chr3.3:65176631-65176650 | None:intergenic | 30.0% | |
| ATTTACAAATACTGCCTCAT+GGG | + | chr3.3:65176113-65176132 | None:intergenic | 30.0% | |
| GACGTGTTTCATTAACAAAA+CGG | - | chr3.3:65177227-65177246 | MS.gene70706:CDS | 30.0% | |
| TAAACATTGTGTAGAGAGTA+TGG | + | chr3.3:65176201-65176220 | None:intergenic | 30.0% | |
| TACACTAAAGTAAATCCACA+AGG | - | chr3.3:65176367-65176386 | MS.gene70706:intron | 30.0% | |
| TATATACAGTATCTCCAATC+AGG | - | chr3.3:65178665-65178684 | MS.gene70706:intron | 30.0% | |
| TCATCAACGATGATAAACTT+TGG | + | chr3.3:65176549-65176568 | None:intergenic | 30.0% | |
| TCCTTTCTTATAGCAGATAA+CGG | - | chr3.3:65175501-65175520 | MS.gene70706:CDS | 30.0% | |
| TGAATTGGATATACAAGCTT+CGG | + | chr3.3:65177013-65177032 | None:intergenic | 30.0% | |
| TGATAGAAACATTAGGTTCA+GGG | - | chr3.3:65177197-65177216 | MS.gene70706:CDS | 30.0% | |
| TGCACAATAGTAAACATCAA+AGG | - | chr3.3:65178893-65178912 | MS.gene70706:intron | 30.0% | |
| TTACTGACCATTAAACTTGA+TGG | - | chr3.3:65179016-65179035 | MS.gene70706:CDS | 30.0% | |
| TTCCTAATGACATAGGATAT+TGG | - | chr3.3:65176255-65176274 | MS.gene70706:CDS | 30.0% | |
| TTGATAGAAACATTAGGTTC+AGG | - | chr3.3:65177196-65177215 | MS.gene70706:CDS | 30.0% | |
| TTTACAGTCTGCTGAAAATT+TGG | - | chr3.3:65178083-65178102 | MS.gene70706:CDS | 30.0% | |
| ! | AAGTTTATCATCGTTGATGA+TGG | - | chr3.3:65176549-65176568 | MS.gene70706:intron | 30.0% |
| ! | AATTTGAAGTTCAGAAGTGA+TGG | - | chr3.3:65176744-65176763 | MS.gene70706:intron | 30.0% |
| ! | ACATGTAAGGTTTGAAATGT+TGG | + | chr3.3:65177496-65177515 | None:intergenic | 30.0% |
| ! | ACTTCTAATTTTCCTCTACT+AGG | + | chr3.3:65178619-65178638 | None:intergenic | 30.0% |
| ! | CAATTAAAAAGGTTTTTGCG+GGG | + | chr3.3:65177793-65177812 | None:intergenic | 30.0% |
| ! | GAATCTTTGATTAGCTCAAA+TGG | + | chr3.3:65176148-65176167 | None:intergenic | 30.0% |
| ! | TACAAACTGTACAATTTTGC+AGG | - | chr3.3:65178577-65178596 | MS.gene70706:CDS | 30.0% |
| ! | TTTTCATTGCGTTTGAAGAT+GGG | + | chr3.3:65176982-65177001 | None:intergenic | 30.0% |
| ! | TTTTTCATTGCGTTTGAAGA+TGG | + | chr3.3:65176983-65177002 | None:intergenic | 30.0% |
| !! | AGGAAAATTAGAAGTATCCT+TGG | - | chr3.3:65178624-65178643 | MS.gene70706:CDS | 30.0% |
| !! | GTGAAACAACAATGTTTTGA+GGG | + | chr3.3:65175382-65175401 | None:intergenic | 30.0% |
| !! | TACATCTTGATTTGTTTGGA+TGG | - | chr3.3:65176326-65176345 | MS.gene70706:intron | 30.0% |
| AACAAGGCTGATAGACATTA+AGG | - | chr3.3:65176719-65176738 | MS.gene70706:intron | 35.0% | |
| AACATTCAAACCTGCATTGA+AGG | + | chr3.3:65178293-65178312 | None:intergenic | 35.0% | |
| AAGAAGCTAGTACTACCTAA+TGG | - | chr3.3:65177894-65177913 | MS.gene70706:intron | 35.0% | |
| AGAAGAATTGTCCTGCATAA+GGG | - | chr3.3:65178859-65178878 | MS.gene70706:intron | 35.0% | |
| AGAAGCAATTGAGTTTCCAT+TGG | + | chr3.3:65175788-65175807 | None:intergenic | 35.0% | |
| AGGATATTGGAGAAACACAA+AGG | - | chr3.3:65176268-65176287 | MS.gene70706:CDS | 35.0% | |
| AGTTAATGAGAATCATGGGA+CGG | + | chr3.3:65176874-65176893 | None:intergenic | 35.0% | |
| ATACTATATGCCTTCAATGC+AGG | - | chr3.3:65178280-65178299 | MS.gene70706:intron | 35.0% | |
| ATAGTAAACATCAAAGGCAG+AGG | - | chr3.3:65178899-65178918 | MS.gene70706:CDS | 35.0% | |
| ATCTGCTATAAGAAAGGAGA+AGG | + | chr3.3:65175499-65175518 | None:intergenic | 35.0% | |
| CATTAGAGACATCAATAGCA+AGG | - | chr3.3:65177260-65177279 | MS.gene70706:CDS | 35.0% | |
| CCAAACAAATCAAGATGTAC+AGG | + | chr3.3:65176325-65176344 | None:intergenic | 35.0% | |
| CTCCAATATCCTATGTCATT+AGG | + | chr3.3:65176260-65176279 | None:intergenic | 35.0% | |
| GAGGCAGTATTTGTAAATTC+AGG | - | chr3.3:65176115-65176134 | MS.gene70706:CDS | 35.0% | |
| GCATGAGAACTAAGAAATGA+AGG | + | chr3.3:65176670-65176689 | None:intergenic | 35.0% | |
| GGATTGTGAAGTTTGAACAT+AGG | + | chr3.3:65176092-65176111 | None:intergenic | 35.0% | |
| GGCAGTATTTGTAAATTCAG+GGG | - | chr3.3:65176117-65176136 | MS.gene70706:CDS | 35.0% | |
| TAATCCATCTTCAGAGTTGT+AGG | + | chr3.3:65178999-65179018 | None:intergenic | 35.0% | |
| TACATGTCAAGCAATCCAAT+TGG | + | chr3.3:65178821-65178840 | None:intergenic | 35.0% | |
| TACTCGAGATTGTTTGTTTC+AGG | - | chr3.3:65177950-65177969 | MS.gene70706:intron | 35.0% | |
| TACTGGGTTCCTTCAATTAT+CGG | + | chr3.3:65176615-65176634 | None:intergenic | 35.0% | |
| TAGAAGAATTGTCCTGCATA+AGG | - | chr3.3:65178858-65178877 | MS.gene70706:intron | 35.0% | |
| TCAAGAAACTCAACATCAAG+TGG | + | chr3.3:65178226-65178245 | None:intergenic | 35.0% | |
| TCCGTTATCTGCTATAAGAA+AGG | + | chr3.3:65175505-65175524 | None:intergenic | 35.0% | |
| TCTGCTATAAGAAAGGAGAA+GGG | + | chr3.3:65175498-65175517 | None:intergenic | 35.0% | |
| TGAAACAAACAATCTCGAGT+AGG | + | chr3.3:65177951-65177970 | None:intergenic | 35.0% | |
| TGAACAAGCATACTCATTGT+CGG | + | chr3.3:65176903-65176922 | None:intergenic | 35.0% | |
| TGATGTTGAGTTTCTTGAAG+AGG | - | chr3.3:65178228-65178247 | MS.gene70706:CDS | 35.0% | |
| TGTACAGTTTGTAAGCATGT+TGG | + | chr3.3:65178570-65178589 | None:intergenic | 35.0% | |
| TTGCTTGACATGTACAATTC+AGG | - | chr3.3:65178827-65178846 | MS.gene70706:intron | 35.0% | |
| TTTGTTTCAGGATCCAGTAA+TGG | - | chr3.3:65177962-65177981 | MS.gene70706:intron | 35.0% | |
| ! | AGCTTTTAACAGTCTTCTTC+TGG | - | chr3.3:65177525-65177544 | MS.gene70706:intron | 35.0% |
| ! | GCTTTTAACAGTCTTCTTCT+GGG | - | chr3.3:65177526-65177545 | MS.gene70706:intron | 35.0% |
| ! | GGTGAAACAACAATGTTTTG+AGG | + | chr3.3:65175383-65175402 | None:intergenic | 35.0% |
| ! | TACCTTTTACCATCCATTAC+TGG | + | chr3.3:65177978-65177997 | None:intergenic | 35.0% |
| ! | TCTGAAAATGTTGATGAGTC+TGG | - | chr3.3:65177621-65177640 | MS.gene70706:CDS | 35.0% |
| ! | TGGTCTAACTTTTCCTGAAA+TGG | + | chr3.3:65178206-65178225 | None:intergenic | 35.0% |
| ! | TGTTAAATTTAGGGCATGTC+TGG | - | chr3.3:65178309-65178328 | MS.gene70706:intron | 35.0% |
| !! | ACCATTAAACTTGATGGTGA+AGG | - | chr3.3:65179022-65179041 | MS.gene70706:CDS | 35.0% |
| !! | ATCCAGTAATGGATGGTAAA+AGG | - | chr3.3:65177973-65177992 | MS.gene70706:CDS | 35.0% |
| !! | CCTGTACATCTTGATTTGTT+TGG | - | chr3.3:65176322-65176341 | MS.gene70706:intron | 35.0% |
| !! | GAATAAAAGAGGGCATTCAA+AGG | - | chr3.3:65176389-65176408 | MS.gene70706:CDS | 35.0% |
| !! | TTATCATCGTTGATGATGGA+TGG | - | chr3.3:65176553-65176572 | MS.gene70706:intron | 35.0% |
| !! | TTTTCCTACAACTCTGAAGA+TGG | - | chr3.3:65178992-65179011 | MS.gene70706:CDS | 35.0% |
| AACAGGCAAGAAGAGAATGT+AGG | + | chr3.3:65175891-65175910 | None:intergenic | 40.0% | |
| AACCACTTTCAACGCAGAAT+TGG | + | chr3.3:65175964-65175983 | None:intergenic | 40.0% | |
| AAGAGGTTGCTGGTGAAAAT+TGG | - | chr3.3:65178245-65178264 | MS.gene70706:CDS | 40.0% | |
| ACAAACAATCTCGAGTAGGA+CGG | + | chr3.3:65177947-65177966 | None:intergenic | 40.0% | |
| AGAGATATTTGTGCCAGACT+GGG | - | chr3.3:65177549-65177568 | MS.gene70706:CDS | 40.0% | |
| AGCCTGGAAAAATATGGAGT+GGG | - | chr3.3:65177076-65177095 | MS.gene70706:CDS | 40.0% | |
| ATAGGCGTCTTTAATTGCCA+AGG | - | chr3.3:65178130-65178149 | MS.gene70706:intron | 40.0% | |
| ATCTGAGGATTTCATGCCAA+GGG | - | chr3.3:65177468-65177487 | MS.gene70706:intron | 40.0% | |
| ATGCATTACAGTGATAAGCC+TGG | - | chr3.3:65177849-65177868 | MS.gene70706:intron | 40.0% | |
| ATGGACAGCCTGGAAAAATA+TGG | - | chr3.3:65177070-65177089 | MS.gene70706:CDS | 40.0% | |
| ATTTGTTTGGATGGTGCACT+TGG | - | chr3.3:65176335-65176354 | MS.gene70706:intron | 40.0% | |
| CATATGCAATTTGCGCCAAT+TGG | - | chr3.3:65178803-65178822 | MS.gene70706:intron | 40.0% | |
| CATGCTTTAGCTGGTTATTG+GGG | - | chr3.3:65176947-65176966 | MS.gene70706:intron | 40.0% | |
| CCTGAAATGGTTAAGTGTGT+CGG | + | chr3.3:65178193-65178212 | None:intergenic | 40.0% | |
| CTTGACATGTACAATTCAGG+AGG | - | chr3.3:65178830-65178849 | MS.gene70706:intron | 40.0% | |
| GAACCTTAGAGATATAGCCA+TGG | - | chr3.3:65177051-65177070 | MS.gene70706:CDS | 40.0% | |
| GAACTTGAATAAGCTGACTG+GGG | - | chr3.3:65178105-65178124 | MS.gene70706:intron | 40.0% | |
| GAGATTGTTGCAAGAACTGT+TGG | + | chr3.3:65176772-65176791 | None:intergenic | 40.0% | |
| GCATGCTTTAGCTGGTTATT+GGG | - | chr3.3:65176946-65176965 | MS.gene70706:intron | 40.0% | |
| GCCTTCACCATCAAGTTTAA+TGG | + | chr3.3:65179026-65179045 | None:intergenic | 40.0% | |
| GGAAACTCAATTGCTTCTAG+TGG | - | chr3.3:65175790-65175809 | MS.gene70706:intron | 40.0% | |
| GGAACTTGAATAAGCTGACT+GGG | - | chr3.3:65178104-65178123 | MS.gene70706:intron | 40.0% | |
| GTATATCCAATTCAGTCAGC+TGG | - | chr3.3:65177019-65177038 | MS.gene70706:intron | 40.0% | |
| GTGGTTGTGCAGTATATGTT+AGG | - | chr3.3:65177726-65177745 | MS.gene70706:intron | 40.0% | |
| GTTGCTGGTGAAAATTGGAA+TGG | - | chr3.3:65178250-65178269 | MS.gene70706:CDS | 40.0% | |
| TAGCTGATATAGCGAGCTAT+TGG | - | chr3.3:65175530-65175549 | MS.gene70706:CDS | 40.0% | |
| TCAAACCTTACATGTTGCGT+CGG | - | chr3.3:65177501-65177520 | MS.gene70706:intron | 40.0% | |
| TCAAACTTCACAATCCCATG+AGG | - | chr3.3:65176096-65176115 | MS.gene70706:CDS | 40.0% | |
| TGGAACTTGAATAAGCTGAC+TGG | - | chr3.3:65178103-65178122 | MS.gene70706:intron | 40.0% | |
| TGTCCATGGCTATATCTCTA+AGG | + | chr3.3:65177057-65177076 | None:intergenic | 40.0% | |
| TGTGAGACATGCAACAAATG+AGG | + | chr3.3:65177303-65177322 | None:intergenic | 40.0% | |
| TGTTAGACCGAAAAGTTGCT+TGG | - | chr3.3:65178949-65178968 | MS.gene70706:CDS | 40.0% | |
| TTAAACAGTCTCTCAAGTGG+AGG | - | chr3.3:65176516-65176535 | MS.gene70706:intron | 40.0% | |
| TTCACATTGAAGAGTCTCCA+AGG | + | chr3.3:65178644-65178663 | None:intergenic | 40.0% | |
| TTCGGTTGTACCTAAAGTGA+AGG | - | chr3.3:65175313-65175332 | MS.gene70706:CDS | 40.0% | |
| TTGTTTCACCTGTTTCAGCT+GGG | - | chr3.3:65175393-65175412 | MS.gene70706:CDS | 40.0% | |
| TTTGTTTGGATGGTGCACTT+GGG | - | chr3.3:65176336-65176355 | MS.gene70706:intron | 40.0% | |
| ! | AACTTATCGGCTATCAGCTA+CGG | + | chr3.3:65175558-65175577 | None:intergenic | 40.0% |
| ! | AGGCTGTTTGAGATAGCTTA+TGG | - | chr3.3:65178373-65178392 | MS.gene70706:intron | 40.0% |
| ! | ATATTTTTCCAGGCTGTCCA+TGG | + | chr3.3:65177071-65177090 | None:intergenic | 40.0% |
| ! | ATGCCCTCTTTTATTCCTTG+TGG | + | chr3.3:65176385-65176404 | None:intergenic | 40.0% |
| ! | ATGTCCACCAAGCAACTTTT+CGG | + | chr3.3:65178959-65178978 | None:intergenic | 40.0% |
| ! | CATTCTCTTCTTGCCTGTTT+TGG | - | chr3.3:65175892-65175911 | MS.gene70706:intron | 40.0% |
| ! | GCAACTTTTCGGTCTAACAT+TGG | + | chr3.3:65178948-65178967 | None:intergenic | 40.0% |
| ! | TTCCCACTCCATATTTTTCC+AGG | + | chr3.3:65177081-65177100 | None:intergenic | 40.0% |
| ! | TTTCAGGATCCAGTAATGGA+TGG | - | chr3.3:65177966-65177985 | MS.gene70706:intron | 40.0% |
| !! | GTTTGAAATGTTGGTTCCCT+TGG | + | chr3.3:65177487-65177506 | None:intergenic | 40.0% |
| !! | TATATCTCTAAGGTTCCCTG+TGG | + | chr3.3:65177047-65177066 | None:intergenic | 40.0% |
| AACATCAAAGGCAGAGGATG+TGG | - | chr3.3:65178905-65178924 | MS.gene70706:CDS | 45.0% | |
| AAGCTGGCCAATGAAACCAT+CGG | - | chr3.3:65178159-65178178 | MS.gene70706:intron | 45.0% | |
| AATAAGCTGACTGGGGTCAT+AGG | - | chr3.3:65178112-65178131 | MS.gene70706:intron | 45.0% | |
| ACAGTATCTCCAATCAGGGT+TGG | - | chr3.3:65178670-65178689 | MS.gene70706:intron | 45.0% | |
| ATTTGCAGCATCCCTTATGC+AGG | + | chr3.3:65178873-65178892 | None:intergenic | 45.0% | |
| CACAGTTATCTTGCTAGCTG+TGG | - | chr3.3:65177142-65177161 | MS.gene70706:CDS | 45.0% | |
| CAGCCTGGAAAAATATGGAG+TGG | - | chr3.3:65177075-65177094 | MS.gene70706:CDS | 45.0% | |
| CATCTGAGGATTTCATGCCA+AGG | - | chr3.3:65177467-65177486 | MS.gene70706:intron | 45.0% | |
| CATTGGAGTACGCTCCAAAT+CGG | + | chr3.3:65178931-65178950 | None:intergenic | 45.0% | |
| CCGACACACTTAACCATTTC+AGG | - | chr3.3:65178190-65178209 | MS.gene70706:intron | 45.0% | |
| CTCCAATTCTGCGTTGAAAG+TGG | - | chr3.3:65175959-65175978 | MS.gene70706:intron | 45.0% | |
| GAAACATTAGGTTCAGGGTG+CGG | - | chr3.3:65177202-65177221 | MS.gene70706:CDS | 45.0% | |
| GAAGGCGAACCGATAATTGA+AGG | - | chr3.3:65176603-65176622 | MS.gene70706:intron | 45.0% | |
| GAATTGGAGCTCGTTTAACG+CGG | + | chr3.3:65175948-65175967 | None:intergenic | 45.0% | |
| GAGAGATATTTGTGCCAGAC+TGG | - | chr3.3:65177548-65177567 | MS.gene70706:CDS | 45.0% | |
| GAGGGACATTTGTGAGAATC+AGG | + | chr3.3:65175364-65175383 | None:intergenic | 45.0% | |
| GAGTTTCTTGAAGAGGTTGC+TGG | - | chr3.3:65178235-65178254 | MS.gene70706:CDS | 45.0% | |
| GCCACATGTAAACGTATCTG+CGG | + | chr3.3:65176928-65176947 | None:intergenic | 45.0% | |
| GCTCTCAAGACTGATCCATT+AGG | + | chr3.3:65177912-65177931 | None:intergenic | 45.0% | |
| GGCATGCTTTAGCTGGTTAT+TGG | - | chr3.3:65176945-65176964 | MS.gene70706:intron | 45.0% | |
| GTCATAACACCAACCCTGAT+TGG | + | chr3.3:65178682-65178701 | None:intergenic | 45.0% | |
| GTCTTGAGAGCAAGATATGC+TGG | - | chr3.3:65177921-65177940 | MS.gene70706:intron | 45.0% | |
| GTCTTTAATTGCCAAGGAGC+AGG | - | chr3.3:65178136-65178155 | MS.gene70706:intron | 45.0% | |
| GTGGTTTCCGATGGTTTCAT+TGG | + | chr3.3:65178169-65178188 | None:intergenic | 45.0% | |
| TACATGTGGCATGCTTTAGC+TGG | - | chr3.3:65176938-65176957 | MS.gene70706:intron | 45.0% | |
| TAGACCGAAAAGTTGCTTGG+TGG | - | chr3.3:65178952-65178971 | MS.gene70706:CDS | 45.0% | |
| TCATGGGACGGAAGTTCAAT+AGG | + | chr3.3:65176862-65176881 | None:intergenic | 45.0% | |
| TCCGCAGATACGTTTACATG+TGG | - | chr3.3:65176924-65176943 | MS.gene70706:intron | 45.0% | |
| TTCCATTGGAACATCGCTTG+CGG | + | chr3.3:65175774-65175793 | None:intergenic | 45.0% | |
| TTTGTAGAGCAAGCACGAGA+CGG | - | chr3.3:65177673-65177692 | MS.gene70706:intron | 45.0% | |
| ! | AATGGTTAAGTGTGTCGGTG+TGG | + | chr3.3:65178188-65178207 | None:intergenic | 45.0% |
| ! | ACATGACGGGAACTAGGAAT+AGG | + | chr3.3:65175443-65175462 | None:intergenic | 45.0% |
| ! | GTTGTTTCACCTGTTTCAGC+TGG | - | chr3.3:65175392-65175411 | MS.gene70706:CDS | 45.0% |
| ! | TGATGGTGAAGGCAACTCAA+GGG | - | chr3.3:65179033-65179052 | MS.gene70706:CDS | 45.0% |
| ! | TTTTCCTCTACTAGGCAGCT+TGG | + | chr3.3:65178611-65178630 | None:intergenic | 45.0% |
| !! | CTCTTCTTGCCTGTTTTGGA+TGG | - | chr3.3:65175896-65175915 | MS.gene70706:intron | 45.0% |
| !! | TTGATGGTGAAGGCAACTCA+AGG | - | chr3.3:65179032-65179051 | MS.gene70706:CDS | 45.0% |
| !!! | TCAGCTGGGTCTGCTTTTTT+AGG | - | chr3.3:65175407-65175426 | MS.gene70706:CDS | 45.0% |
| AAAGCAGACCCAGCTGAAAC+AGG | + | chr3.3:65175404-65175423 | None:intergenic | 50.0% | |
| ACTTGGAACATGTCCCAGTC+TGG | + | chr3.3:65177565-65177584 | None:intergenic | 50.0% | |
| AGATATAGCCATGGACAGCC+TGG | - | chr3.3:65177060-65177079 | MS.gene70706:CDS | 50.0% | |
| AGCTACCGACGCAACATGTA+AGG | + | chr3.3:65177509-65177528 | None:intergenic | 50.0% | |
| AGGCACTCGTCCTTCACTTT+AGG | + | chr3.3:65175326-65175345 | None:intergenic | 50.0% | |
| AGTGAAGGACGAGTGCCTTA+TGG | - | chr3.3:65175328-65175347 | MS.gene70706:CDS | 50.0% | |
| ATCCGCAAGCGATGTTCCAA+TGG | - | chr3.3:65175769-65175788 | MS.gene70706:intron | 50.0% | |
| CATGCAGCAGCAAGAGCAAT+AGG | - | chr3.3:65177704-65177723 | MS.gene70706:intron | 50.0% | |
| CGAAAGGCTCCATCCAAAAC+AGG | + | chr3.3:65175908-65175927 | None:intergenic | 50.0% | |
| CTATTGCTCTTGCTGCTGCA+TGG | + | chr3.3:65177706-65177725 | None:intergenic | 50.0% | |
| CTTTCCAAGCTGCCTAGTAG+AGG | - | chr3.3:65178604-65178623 | MS.gene70706:CDS | 50.0% | |
| GCTTTAGCTGGTTATTGGGG+AGG | - | chr3.3:65176950-65176969 | MS.gene70706:intron | 50.0% | |
| GGTGGATGATACCACGTGTT+GGG | - | chr3.3:65175744-65175763 | MS.gene70706:CDS | 50.0% | |
| GTGGAACCAGCTGACTGAAT+TGG | + | chr3.3:65177028-65177047 | None:intergenic | 50.0% | |
| TCCTTGCAAAGTTGCGCGAA+AGG | + | chr3.3:65175924-65175943 | None:intergenic | 50.0% | |
| ! | AAGTTGCTTGGTGGACATGC+AGG | - | chr3.3:65178961-65178980 | MS.gene70706:CDS | 50.0% |
| ! | ATTCAGTCAGCTGGTTCCAC+AGG | - | chr3.3:65177028-65177047 | MS.gene70706:intron | 50.0% |
| ! | GTGAAGACATGACGGGAACT+AGG | + | chr3.3:65175449-65175468 | None:intergenic | 50.0% |
| ! | TGGTGGATGATACCACGTGT+TGG | - | chr3.3:65175743-65175762 | MS.gene70706:CDS | 50.0% |
| ! | TTCAGTCAGCTGGTTCCACA+GGG | - | chr3.3:65177029-65177048 | MS.gene70706:intron | 50.0% |
| !! | TGCAGTAGCAAGAGCATCTG+AGG | - | chr3.3:65177453-65177472 | MS.gene70706:intron | 50.0% |
| ACATTAGGTTCAGGGTGCGG+TGG | - | chr3.3:65177205-65177224 | MS.gene70706:CDS | 55.0% | |
| AGGACGAGTGCCTTATGGTG+AGG | - | chr3.3:65175333-65175352 | MS.gene70706:CDS | 55.0% | |
| ATTGCCAAGGAGCAGGAAGC+TGG | - | chr3.3:65178143-65178162 | MS.gene70706:intron | 55.0% | |
| CTTGCGGATTTCCCAACACG+TGG | + | chr3.3:65175758-65175777 | None:intergenic | 55.0% | |
| GACGAGTGCCTTATGGTGAG+GGG | - | chr3.3:65175335-65175354 | MS.gene70706:CDS | 55.0% | |
| GCAGCAGCAAGAGCAATAGG+TGG | - | chr3.3:65177707-65177726 | MS.gene70706:intron | 55.0% | |
| GCCTTTCGCGCAACTTTGCA+AGG | - | chr3.3:65175920-65175939 | MS.gene70706:intron | 55.0% | |
| GGACGAGTGCCTTATGGTGA+GGG | - | chr3.3:65175334-65175353 | MS.gene70706:CDS | 55.0% | |
| GGAGAAGGGATGAGACTCAC+CGG | + | chr3.3:65175484-65175503 | None:intergenic | 55.0% | |
| TCCCGTCATGTCTTCACCCT+CGG | - | chr3.3:65175452-65175471 | MS.gene70706:CDS | 55.0% | |
| TGCCGAGGGTGAAGACATGA+CGG | + | chr3.3:65175457-65175476 | None:intergenic | 55.0% | |
| ! | CTTGGTGGACATGCAGGAGA+AGG | - | chr3.3:65178967-65178986 | MS.gene70706:CDS | 55.0% |
| ! | TCAGGTTGCCCCTCACCATA+AGG | + | chr3.3:65175346-65175365 | None:intergenic | 55.0% |
| ! | TGTGTCGGTGTGGTTTCCGA+TGG | + | chr3.3:65178178-65178197 | None:intergenic | 55.0% |
| GCCGAGGGTGAAGACATGAC+GGG | + | chr3.3:65175456-65175475 | None:intergenic | 60.0% | |
| GGCAGAGGATGTGGCCGATT+TGG | - | chr3.3:65178914-65178933 | MS.gene70706:CDS | 60.0% | |
| TCTTCACCCTCGGCACTCTC+CGG | - | chr3.3:65175462-65175481 | MS.gene70706:CDS | 60.0% | |
| TTGGCCAGCTTCCTGCTCCT+TGG | + | chr3.3:65178150-65178169 | None:intergenic | 60.0% | |
| ! | CTTGCTAGCTGTGGCGTCGA+TGG | - | chr3.3:65177151-65177170 | MS.gene70706:CDS | 60.0% |
| !! | AGACTCACCGGAGAGTGCCG+AGG | + | chr3.3:65175472-65175491 | None:intergenic | 65.0% |
| !! | GACTCACCGGAGAGTGCCGA+GGG | + | chr3.3:65175471-65175490 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 65175305 | 65179075 | 65175305 | ID=MS.gene70706 |
| chr3.3 | mRNA | 65175305 | 65179075 | 65175305 | ID=MS.gene70706.t1;Parent=MS.gene70706 |
| chr3.3 | exon | 65178897 | 65179075 | 65178897 | ID=MS.gene70706.t1.exon1;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65178897 | 65179075 | 65178897 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65178400 | 65178674 | 65178400 | ID=MS.gene70706.t1.exon2;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65178400 | 65178674 | 65178400 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65178207 | 65178297 | 65178207 | ID=MS.gene70706.t1.exon3;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65178207 | 65178297 | 65178207 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65177970 | 65178110 | 65177970 | ID=MS.gene70706.t1.exon4;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65177970 | 65178110 | 65177970 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65177749 | 65177856 | 65177749 | ID=MS.gene70706.t1.exon5;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65177749 | 65177856 | 65177749 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65177548 | 65177667 | 65177548 | ID=MS.gene70706.t1.exon6;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65177548 | 65177667 | 65177548 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65177039 | 65177449 | 65177039 | ID=MS.gene70706.t1.exon7;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65177039 | 65177449 | 65177039 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65176798 | 65176939 | 65176798 | ID=MS.gene70706.t1.exon8;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65176798 | 65176939 | 65176798 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65176633 | 65176700 | 65176633 | ID=MS.gene70706.t1.exon9;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65176633 | 65176700 | 65176633 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65176386 | 65176520 | 65176386 | ID=MS.gene70706.t1.exon10;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65176386 | 65176520 | 65176386 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65176079 | 65176290 | 65176079 | ID=MS.gene70706.t1.exon11;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65176079 | 65176290 | 65176079 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65175693 | 65175781 | 65175693 | ID=MS.gene70706.t1.exon12;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65175693 | 65175781 | 65175693 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| chr3.3 | exon | 65175305 | 65175589 | 65175305 | ID=MS.gene70706.t1.exon13;Parent=MS.gene70706.t1 |
| chr3.3 | CDS | 65175305 | 65175589 | 65175305 | ID=cds.MS.gene70706.t1;Parent=MS.gene70706.t1 |
| Gene Sequence |
| Protein sequence |
