Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70998.t1 | KEH19950.1 | 97.3 | 852 | 9 | 1 | 1 | 838 | 1 | 852 | 0.00E+00 | 1572.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70998.t1 | Q84K16 | 71.8 | 856 | 218 | 4 | 1 | 841 | 1 | 848 | 0.0e+00 | 1161.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70998.t1 | A0A072U2F4 | 97.3 | 852 | 9 | 1 | 1 | 838 | 1 | 852 | 0.0e+00 | 1572.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70998 | MS.gene052323 | PPI |
| MS.gene75781 | MS.gene70998 | PPI |
| MS.gene021005 | MS.gene70998 | PPI |
| MS.gene29095 | MS.gene70998 | PPI |
| MS.gene006488 | MS.gene70998 | PPI |
| MS.gene017498 | MS.gene70998 | PPI |
| MS.gene031810 | MS.gene70998 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70998.t1 | MTR_8g063690 | 97.300 | 852 | 9 | 1 | 1 | 838 | 1 | 852 | 0.0 | 1695 |
| MS.gene70998.t1 | MTR_5g034780 | 81.503 | 865 | 129 | 6 | 1 | 851 | 1 | 848 | 0.0 | 1406 |
| MS.gene70998.t1 | MTR_2g084610 | 29.236 | 602 | 378 | 13 | 13 | 581 | 12 | 598 | 1.08e-74 | 264 |
| MS.gene70998.t1 | MTR_8g072250 | 23.833 | 600 | 393 | 12 | 4 | 563 | 19 | 594 | 1.38e-49 | 190 |
| MS.gene70998.t1 | MTR_8g104380 | 22.954 | 501 | 336 | 10 | 10 | 485 | 18 | 493 | 1.71e-26 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70998.t1 | AT1G60070 | 71.948 | 852 | 204 | 6 | 1 | 838 | 1 | 831 | 0.0 | 1253 |
| MS.gene70998.t1 | AT1G60070 | 69.032 | 888 | 204 | 7 | 1 | 838 | 1 | 867 | 0.0 | 1233 |
| MS.gene70998.t1 | AT1G23900 | 71.846 | 856 | 218 | 4 | 1 | 841 | 1 | 848 | 0.0 | 1213 |
| MS.gene70998.t1 | AT1G23900 | 71.846 | 856 | 218 | 4 | 1 | 841 | 1 | 848 | 0.0 | 1213 |
| MS.gene70998.t1 | AT1G23900 | 71.564 | 844 | 217 | 4 | 13 | 841 | 1 | 836 | 0.0 | 1190 |
| MS.gene70998.t1 | AT1G23935 | 69.675 | 277 | 58 | 3 | 11 | 273 | 872 | 1136 | 4.47e-113 | 374 |
| MS.gene70998.t1 | AT1G23935 | 52.778 | 180 | 68 | 3 | 487 | 665 | 707 | 870 | 6.02e-40 | 160 |
| MS.gene70998.t1 | AT1G23935 | 64.356 | 101 | 36 | 0 | 492 | 592 | 1130 | 1230 | 5.26e-31 | 132 |
| MS.gene70998.t1 | AT1G23935 | 69.675 | 277 | 58 | 3 | 11 | 273 | 871 | 1135 | 4.98e-113 | 374 |
| MS.gene70998.t1 | AT1G23935 | 53.073 | 179 | 68 | 2 | 487 | 665 | 707 | 869 | 4.23e-41 | 164 |
| MS.gene70998.t1 | AT1G23935 | 64.356 | 101 | 36 | 0 | 492 | 592 | 1129 | 1229 | 5.58e-31 | 132 |
| MS.gene70998.t1 | AT1G23935 | 69.675 | 277 | 58 | 3 | 11 | 273 | 922 | 1186 | 5.36e-113 | 375 |
| MS.gene70998.t1 | AT1G23935 | 53.073 | 179 | 68 | 2 | 487 | 665 | 758 | 920 | 3.84e-41 | 164 |
| MS.gene70998.t1 | AT1G23935 | 64.356 | 101 | 36 | 0 | 492 | 592 | 1180 | 1280 | 5.15e-31 | 132 |
| MS.gene70998.t1 | AT5G22780 | 27.715 | 617 | 399 | 12 | 13 | 596 | 10 | 612 | 3.85e-73 | 259 |
| MS.gene70998.t1 | AT5G22780 | 27.715 | 617 | 399 | 12 | 13 | 596 | 10 | 612 | 3.85e-73 | 259 |
| MS.gene70998.t1 | AT5G22770 | 27.715 | 617 | 399 | 12 | 13 | 596 | 10 | 612 | 4.28e-73 | 259 |
| MS.gene70998.t1 | AT5G22770 | 27.715 | 617 | 399 | 12 | 13 | 596 | 10 | 612 | 4.28e-73 | 259 |
| MS.gene70998.t1 | AT5G22770 | 27.715 | 617 | 399 | 12 | 13 | 596 | 10 | 612 | 4.28e-73 | 259 |
| MS.gene70998.t1 | AT5G22770 | 27.715 | 617 | 399 | 12 | 13 | 596 | 10 | 612 | 4.28e-73 | 259 |
| MS.gene70998.t1 | AT5G22770 | 27.715 | 617 | 399 | 12 | 13 | 596 | 10 | 612 | 4.28e-73 | 259 |
| MS.gene70998.t1 | AT5G22770 | 27.715 | 617 | 399 | 12 | 13 | 596 | 10 | 612 | 4.28e-73 | 259 |
| MS.gene70998.t1 | AT1G31730 | 25.671 | 596 | 387 | 12 | 4 | 563 | 19 | 594 | 1.65e-57 | 213 |
| MS.gene70998.t1 | AT1G48760 | 24.600 | 500 | 329 | 14 | 10 | 485 | 17 | 492 | 3.75e-28 | 122 |
| MS.gene70998.t1 | AT1G48760 | 24.600 | 500 | 329 | 14 | 10 | 485 | 17 | 492 | 3.75e-28 | 122 |
| MS.gene70998.t1 | AT1G48760 | 24.600 | 500 | 329 | 14 | 10 | 485 | 17 | 492 | 3.75e-28 | 122 |
Find 170 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATTCACTTACTGTTAT+TGG | 0.083799 | 8.4:-37480450 | None:intergenic |
| CAAGAACTTGGTGAGGTTTC+GGG | 0.169967 | 8.4:+37486907 | MS.gene70998:CDS |
| TGCTTCTATGACAGATTTAT+TGG | 0.203908 | 8.4:+37483646 | MS.gene70998:CDS |
| CCAAGAACTTGGTGAGGTTT+CGG | 0.205607 | 8.4:+37486906 | MS.gene70998:CDS |
| GGACTTGCTCTTTGTGCTTT+GGG | 0.207114 | 8.4:+37474237 | MS.gene70998:CDS |
| AGTTGAAGCTTCGTCCTTTC+AGG | 0.211060 | 8.4:+37486861 | MS.gene70998:intron |
| TGAAACTATTGAGCAAATTT+TGG | 0.221383 | 8.4:-37479098 | None:intergenic |
| GCTAAGACTGTTGCGGGAAT+TGG | 0.246312 | 8.4:+37475623 | MS.gene70998:CDS |
| TTGCAAAGCATCAAAATATT+AGG | 0.248436 | 8.4:+37482204 | MS.gene70998:CDS |
| CTTGGCTACCCCACACATTT+TGG | 0.250975 | 8.4:+37473933 | MS.gene70998:CDS |
| AAATGGCACAGATGTTCTTT+TGG | 0.256911 | 8.4:+37483451 | MS.gene70998:CDS |
| AAGTCAGTGATCAAGATTTC+AGG | 0.260313 | 8.4:+37479062 | MS.gene70998:CDS |
| TTGGTTGTTTGTGGGGTTCC+TGG | 0.265044 | 8.4:-37483865 | None:intergenic |
| GAGACATCGTGCAACGATTC+TGG | 0.277385 | 8.4:+37478829 | MS.gene70998:CDS |
| ATTGCTTATGACAACAATTA+AGG | 0.289580 | 8.4:-37480189 | None:intergenic |
| TGGATACTGTTTCAAAGAAT+TGG | 0.292576 | 8.4:-37474069 | None:intergenic |
| TGTAGAAAGGATGCCAGTTT+TGG | 0.299639 | 8.4:+37482338 | MS.gene70998:CDS |
| CATAAAGATAGCTTGGATAT+TGG | 0.302727 | 8.4:-37483884 | None:intergenic |
| CCGAAACCTCACCAAGTTCT+TGG | 0.305407 | 8.4:-37486906 | None:intergenic |
| TTGAACACACTCATACAAAA+TGG | 0.308234 | 8.4:-37477042 | None:intergenic |
| GGGACTTGCTCTTTGTGCTT+TGG | 0.309614 | 8.4:+37474236 | MS.gene70998:CDS |
| TCAGTTTCTTCAGTTGCTCT+TGG | 0.327579 | 8.4:+37484376 | MS.gene70998:intron |
| CCTTGAACTTATTTATGTTC+TGG | 0.331374 | 8.4:+37478988 | MS.gene70998:CDS |
| ACAGTCTTAGCAATTTGATA+TGG | 0.339446 | 8.4:-37475611 | None:intergenic |
| ACTCCAGCGCCGAGCTCTTC+TGG | 0.350410 | 8.4:+37482507 | MS.gene70998:CDS |
| AAAATCTGTATATGCATTAG+AGG | 0.356917 | 8.4:-37483914 | None:intergenic |
| AAGGGAACCGATTTCATCAT+TGG | 0.357743 | 8.4:+37483571 | MS.gene70998:CDS |
| CAAATTGCTAAGACTGTTGC+GGG | 0.361403 | 8.4:+37475617 | MS.gene70998:CDS |
| GAACATTTGTTCAGCAGAAA+TGG | 0.373763 | 8.4:+37474260 | MS.gene70998:CDS |
| CCCAGCAACTTTGTTTGACT+CGG | 0.380709 | 8.4:-37477015 | None:intergenic |
| TCTCTTCATCCACGCGTTTG+AGG | 0.385851 | 8.4:+37472408 | MS.gene70998:CDS |
| ACCGAGTCAAACAAAGTTGC+TGG | 0.388455 | 8.4:+37477014 | MS.gene70998:CDS |
| AATCTTGATCACTGACTTCA+AGG | 0.392658 | 8.4:-37479057 | None:intergenic |
| ATTTCCTAAAAGATGAAGTA+TGG | 0.393292 | 8.4:+37480162 | MS.gene70998:CDS |
| GGCAATACTCTCCCTGCTAA+TGG | 0.398269 | 8.4:+37484410 | MS.gene70998:CDS |
| GCTTGGATATTGGTTGTTTG+TGG | 0.401143 | 8.4:-37483874 | None:intergenic |
| AAAGTCTCCTCATCCAAAAC+TGG | 0.402237 | 8.4:-37482351 | None:intergenic |
| ACATTAGCTTGGACATATTC+CGG | 0.402551 | 8.4:-37473899 | None:intergenic |
| TACCACAAAAGAAATGGCTT+TGG | 0.407532 | 8.4:+37481729 | MS.gene70998:CDS |
| CTAAGACTGTTGCGGGAATT+GGG | 0.408982 | 8.4:+37475624 | MS.gene70998:CDS |
| ATGTGGTGCCTTGGAGAGTA+TGG | 0.411085 | 8.4:+37480384 | MS.gene70998:CDS |
| AGCAATTTGATATGGAGAAA+AGG | 0.412858 | 8.4:-37475603 | None:intergenic |
| TCACCAGAGTATGATATTGC+TGG | 0.413853 | 8.4:+37475570 | MS.gene70998:CDS |
| AGCAATGCTTCCAAGCTTCA+TGG | 0.414636 | 8.4:+37480206 | MS.gene70998:CDS |
| ACTTTCAATGCTAGGAGGGC+TGG | 0.417191 | 8.4:+37482369 | MS.gene70998:CDS |
| GTAGAAATGCACAGAAGGTT+TGG | 0.419655 | 8.4:+37475512 | MS.gene70998:intron |
| CTTGGATATTGGTTGTTTGT+GGG | 0.419984 | 8.4:-37483873 | None:intergenic |
| AGGTAACCTATTCTCTTCTC+TGG | 0.420513 | 8.4:-37473996 | None:intergenic |
| CTTTCAATGCTAGGAGGGCT+GGG | 0.423217 | 8.4:+37482370 | MS.gene70998:CDS |
| ATTGAGCCCTTTCCATTAGC+AGG | 0.427221 | 8.4:-37484422 | None:intergenic |
| CCGCGAAGAGAGCTTCAATA+AGG | 0.431659 | 8.4:-37481755 | None:intergenic |
| CCAGAACATAAATAAGTTCA+AGG | 0.436916 | 8.4:-37478988 | None:intergenic |
| CCTTATTGAAGCTCTCTTCG+CGG | 0.438439 | 8.4:+37481755 | MS.gene70998:CDS |
| GCAATTTGATATGGAGAAAA+GGG | 0.440931 | 8.4:-37475602 | None:intergenic |
| TGTGCAGGAGGTGATTCAAT+AGG | 0.448975 | 8.4:-37483503 | None:intergenic |
| TCACGAGCATCTTCAACTGC+TGG | 0.449881 | 8.4:+37483620 | MS.gene70998:CDS |
| GGGAGAGTATTGCCGCTAGC+TGG | 0.454118 | 8.4:-37484401 | None:intergenic |
| GCAGTTATAGACGGATTAAC+CGG | 0.457417 | 8.4:-37483796 | None:intergenic |
| ATAGATGAGTTGCTTTGTGC+AGG | 0.457462 | 8.4:-37483518 | None:intergenic |
| CCCGAAATTGCAGCAACCTC+TGG | 0.457834 | 8.4:-37474297 | None:intergenic |
| AGATCATCCAATGATGAAAT+CGG | 0.457993 | 8.4:-37483578 | None:intergenic |
| AGATCTTACCACAAAAGAAA+TGG | 0.459576 | 8.4:+37481723 | MS.gene70998:CDS |
| ATACCTTTGGAACTGCTGCC+TGG | 0.462796 | 8.4:-37483942 | None:intergenic |
| GACGCAGCTTCAACTCCAAC+AGG | 0.463349 | 8.4:+37482402 | MS.gene70998:CDS |
| GGATTTCCAGAGAAGAGAAT+AGG | 0.466535 | 8.4:+37473990 | MS.gene70998:CDS |
| TCATACAAATCAGTATATAG+TGG | 0.470269 | 8.4:+37474215 | MS.gene70998:CDS |
| GGATGAAGAGAACGGATTCA+TGG | 0.471592 | 8.4:-37472396 | None:intergenic |
| ATTTCAGACGTCAACAGAAC+AGG | 0.476105 | 8.4:+37480256 | MS.gene70998:CDS |
| AACTTCTCCCTTCAGATATG+TGG | 0.477009 | 8.4:+37478757 | MS.gene70998:intron |
| ACAAATTCATAAAGATAGCT+TGG | 0.477244 | 8.4:-37483891 | None:intergenic |
| AGGATTCTGATGCTTCAATT+CGG | 0.483694 | 8.4:+37478957 | MS.gene70998:intron |
| GAAAATTTACCTTTCCATGT+TGG | 0.487286 | 8.4:-37484472 | None:intergenic |
| AGAGATATTCTCCAAGAACT+TGG | 0.487974 | 8.4:+37486895 | MS.gene70998:CDS |
| ATTCTCTTCTCTGGAAATCC+AGG | 0.488886 | 8.4:-37473987 | None:intergenic |
| AAATAATAGTTCAGTACAAA+GGG | 0.492254 | 8.4:+37482132 | MS.gene70998:CDS |
| GTGCTTGCAATCAATATCCT+TGG | 0.492845 | 8.4:+37477101 | MS.gene70998:CDS |
| GGCTGTGAGTGCTGACACTC+AGG | 0.493191 | 8.4:+37478799 | MS.gene70998:CDS |
| TACAGTGTATCCATGAAGCT+TGG | 0.498602 | 8.4:-37480216 | None:intergenic |
| TTTCGTCAACAAGCAACATA+AGG | 0.502764 | 8.4:-37474022 | None:intergenic |
| AACATCCACAGCATCTGATT+CGG | 0.507884 | 8.4:-37481671 | None:intergenic |
| TCAGTTGTGTCACAACAGTC+TGG | 0.513473 | 8.4:+37482567 | MS.gene70998:CDS |
| ATGAAAATGACCAACACTAC+AGG | 0.514474 | 8.4:+37473874 | MS.gene70998:CDS |
| ATGAGGAGACTTTCAATGCT+AGG | 0.517669 | 8.4:+37482361 | MS.gene70998:CDS |
| GAAATAATAGTTCAGTACAA+AGG | 0.518955 | 8.4:+37482131 | MS.gene70998:CDS |
| TCTCTTAGTAAGCCAGTAGC+AGG | 0.520381 | 8.4:-37474856 | None:intergenic |
| GACTTGCTCTTTGTGCTTTG+GGG | 0.523324 | 8.4:+37474238 | MS.gene70998:CDS |
| CTACCAGAAGAGCTCGGCGC+TGG | 0.524504 | 8.4:-37482510 | None:intergenic |
| CAAAGCTTACCACTTGCTGA+TGG | 0.524848 | 8.4:-37483686 | None:intergenic |
| ACAGATTTGACAACTCCATT+CGG | 0.525220 | 8.4:-37482441 | None:intergenic |
| TACTCTCCCTGCTAATGGAA+AGG | 0.526380 | 8.4:+37484415 | MS.gene70998:CDS |
| TCCATTTGACCAAAATGTGT+GGG | 0.528861 | 8.4:-37473942 | None:intergenic |
| CGTGTTGCAATGTGGTGCCT+TGG | 0.531783 | 8.4:+37480375 | MS.gene70998:CDS |
| ACTCTCCCTGCTAATGGAAA+GGG | 0.532051 | 8.4:+37484416 | MS.gene70998:CDS |
| CTCAAGTTGATATCATCTCC+TGG | 0.532466 | 8.4:+37473969 | MS.gene70998:CDS |
| CTAATGTTCATCCACATGCT+TGG | 0.535489 | 8.4:+37473915 | MS.gene70998:CDS |
| TGCTTGCAAAACTGCGGCAG+AGG | 0.537918 | 8.4:+37473803 | MS.gene70998:CDS |
| TTTGCTGCAATTCTAGCACT+AGG | 0.538532 | 8.4:-37482157 | None:intergenic |
| CATGTGGATGAACATTAGCT+TGG | 0.545929 | 8.4:-37473910 | None:intergenic |
| GGCTCGTGACCTTGCACCAG+AGG | 0.547470 | 8.4:+37474281 | MS.gene70998:CDS |
| TTCATCAATTGAAGCGCGAA+TGG | 0.547680 | 8.4:-37473856 | None:intergenic |
| AGGTTTGGTGAGAACTCTAA+AGG | 0.547914 | 8.4:+37475527 | MS.gene70998:CDS |
| CTCTCGAATGCAGTTATAGA+CGG | 0.549489 | 8.4:-37483805 | None:intergenic |
| TTGGATATTGGTTGTTTGTG+GGG | 0.553313 | 8.4:-37483872 | None:intergenic |
| AGCTCTTGAACATATTAGAA+AGG | 0.554006 | 8.4:+37474945 | MS.gene70998:CDS |
| GGCACTGAACATGCTGATGA+AGG | 0.554525 | 8.4:+37478778 | MS.gene70998:CDS |
| AGACTAACTGAAGGTCCTGT+TGG | 0.555016 | 8.4:-37482417 | None:intergenic |
| AGTCAGTGATCAAGATTTCA+GGG | 0.555114 | 8.4:+37479063 | MS.gene70998:CDS |
| TATTCCGGTGCCTGTAGTGT+TGG | 0.557877 | 8.4:-37473884 | None:intergenic |
| GCAGTTCTACACTTGTAGAA+AGG | 0.559300 | 8.4:+37482325 | MS.gene70998:intron |
| TACTAACAGCCAACATGGAA+AGG | 0.559428 | 8.4:+37484463 | MS.gene70998:CDS |
| CAAATCGGGATAACAATACC+AGG | 0.560072 | 8.4:+37477135 | MS.gene70998:CDS |
| ATATCATACTCTGTACAAGA+AGG | 0.560662 | 8.4:-37481781 | None:intergenic |
| TTGTCTTGAATAGAAAACAA+TGG | 0.561491 | 8.4:+37483772 | MS.gene70998:intron |
| TCAAATTGCTAAGACTGTTG+CGG | 0.564454 | 8.4:+37475616 | MS.gene70998:CDS |
| GAGAAGAGAATAGGTTACCT+TGG | 0.569333 | 8.4:+37473999 | MS.gene70998:CDS |
| GATCTGGTACATTGATCAGA+TGG | 0.569583 | 8.4:+37479692 | MS.gene70998:CDS |
| TTCAATCTCTCAAAACAGCC+AGG | 0.570001 | 8.4:+37483847 | MS.gene70998:CDS |
| TTCCATTTGACCAAAATGTG+TGG | 0.570770 | 8.4:-37473943 | None:intergenic |
| ATGACCAACACTACAGGCAC+CGG | 0.571692 | 8.4:+37473880 | MS.gene70998:CDS |
| AGATCAAGCAAATCTAGAAG+TGG | 0.571823 | 8.4:-37482468 | None:intergenic |
| TTGAATAGAAAACAATGGAC+CGG | 0.575202 | 8.4:+37483777 | MS.gene70998:intron |
| AGAGTTACTAACAGCCAACA+TGG | 0.576120 | 8.4:+37484458 | MS.gene70998:CDS |
| CACTGTAAGAGCATTATACA+AGG | 0.576802 | 8.4:+37480232 | MS.gene70998:CDS |
| GATGGTTAAGATTCTGTCCA+AGG | 0.577562 | 8.4:+37479710 | MS.gene70998:CDS |
| AAGACAAGAAGTTCTAATGT+TGG | 0.577873 | 8.4:+37474043 | MS.gene70998:CDS |
| CATAAAGAAAGTCCCAGACC+TGG | 0.578337 | 8.4:+37474816 | MS.gene70998:CDS |
| CATACAAATCAGTATATAGT+GGG | 0.580791 | 8.4:+37474216 | MS.gene70998:CDS |
| GCCTCTGGCCCATCAGCAAG+TGG | 0.583733 | 8.4:+37483677 | MS.gene70998:CDS |
| CCGAGTCAAACAAAGTTGCT+GGG | 0.584005 | 8.4:+37477015 | MS.gene70998:CDS |
| ATGCCAGCAATATCATACTC+TGG | 0.585818 | 8.4:-37475573 | None:intergenic |
| AAAGCTTACCACTTGCTGAT+GGG | 0.586473 | 8.4:-37483685 | None:intergenic |
| CAATGTACCAGATCTTCTCA+AGG | 0.590800 | 8.4:-37479683 | None:intergenic |
| TTTCCAGGCAGCAGTTCCAA+AGG | 0.593047 | 8.4:+37483939 | MS.gene70998:CDS |
| TTGAGCCCTTTCCATTAGCA+GGG | 0.593488 | 8.4:-37484421 | None:intergenic |
| TCTAATACAATTGACCTGAA+AGG | 0.596425 | 8.4:-37486875 | None:intergenic |
| TATGAACGACATACTTGCCC+AGG | 0.596648 | 8.4:+37475674 | MS.gene70998:CDS |
| GATGAGTTGCTTTGTGCAGG+AGG | 0.598544 | 8.4:-37483515 | None:intergenic |
| AAGAACTTGGTGAGGTTTCG+GGG | 0.598872 | 8.4:+37486908 | MS.gene70998:CDS |
| CATTCGAGAGCAGCTCCTTG+AGG | 0.599217 | 8.4:+37483818 | MS.gene70998:CDS |
| ACCACTTGCTGATGGGCCAG+AGG | 0.599354 | 8.4:-37483678 | None:intergenic |
| GGTGATTCAATAGGTGCAGA+AGG | 0.600011 | 8.4:-37483494 | None:intergenic |
| TTGCAGCAACCTCTGGTGCA+AGG | 0.602335 | 8.4:-37474290 | None:intergenic |
| CAGAACATAAATAAGTTCAA+GGG | 0.606658 | 8.4:-37478987 | None:intergenic |
| TATTCTCCAAGAACTTGGTG+AGG | 0.611289 | 8.4:+37486900 | MS.gene70998:CDS |
| CAACAAGCAACATAAGGCCA+AGG | 0.611915 | 8.4:-37474016 | None:intergenic |
| ATAAGTCGCCATACTCTCCA+AGG | 0.612690 | 8.4:-37480392 | None:intergenic |
| GGTCACCGAATCAGATGCTG+TGG | 0.614079 | 8.4:+37481666 | MS.gene70998:intron |
| CCTTCAGTTAGTCTTCCGAA+TGG | 0.616811 | 8.4:+37482426 | MS.gene70998:CDS |
| TTATTGTAGAAATGCACAGA+AGG | 0.617727 | 8.4:+37475507 | MS.gene70998:intron |
| GATTACTAACCTCAAACGCG+TGG | 0.623066 | 8.4:-37472417 | None:intergenic |
| TATCATACTCTGTACAAGAA+GGG | 0.623158 | 8.4:-37481780 | None:intergenic |
| AGGAGACTTTCAATGCTAGG+AGG | 0.624598 | 8.4:+37482364 | MS.gene70998:CDS |
| ATAATGAGCATTGAAGATAA+CGG | 0.625734 | 8.4:+37477068 | MS.gene70998:CDS |
| GAGATTGAATGTCAACCTCA+AGG | 0.626614 | 8.4:-37483833 | None:intergenic |
| TTACTAAGAGAGAAGCATCA+TGG | 0.629530 | 8.4:+37474868 | MS.gene70998:CDS |
| TTGTGGTAAGATCTGATGCA+TGG | 0.635838 | 8.4:-37481714 | None:intergenic |
| CTGTTGCGGGAATTGGGCGA+AGG | 0.636293 | 8.4:+37475630 | MS.gene70998:CDS |
| AATGTACCAGATCTTCTCAA+GGG | 0.641590 | 8.4:-37479682 | None:intergenic |
| AAATCACTACCAGAAGAGCT+CGG | 0.643691 | 8.4:-37482516 | None:intergenic |
| CCATTTGACCAAAATGTGTG+GGG | 0.650020 | 8.4:-37473941 | None:intergenic |
| GGAGACTTTCAATGCTAGGA+GGG | 0.651603 | 8.4:+37482365 | MS.gene70998:CDS |
| GAATGGAGTTGTCAAATCTG+TGG | 0.652542 | 8.4:+37482443 | MS.gene70998:CDS |
| CAGGAGATGATATCAACTTG+AGG | 0.660137 | 8.4:-37473968 | None:intergenic |
| AAACGCGTGGATGAAGAGAA+CGG | 0.666063 | 8.4:-37472404 | None:intergenic |
| CCATTCGGAAGACTAACTGA+AGG | 0.679774 | 8.4:-37482426 | None:intergenic |
| ATGAGCATTGAAGATAACGG+TGG | 0.685116 | 8.4:+37477071 | MS.gene70998:CDS |
| TTGCTCTTGGATCCAGCTAG+CGG | 0.698582 | 8.4:+37484389 | MS.gene70998:CDS |
| GTGTGGGGTAGCCAAGCATG+TGG | 0.704313 | 8.4:-37473926 | None:intergenic |
| CATACGTGCTTGCAAAACTG+CGG | 0.708095 | 8.4:+37473797 | MS.gene70998:CDS |
| CAGTGATCAAGATTTCAGGG+AGG | 0.799054 | 8.4:+37479066 | MS.gene70998:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 37472398 | 37486949 | 37472398 | ID=MS.gene70998 |
| chr8.4 | mRNA | 37472398 | 37486949 | 37472398 | ID=MS.gene70998.t1;Parent=MS.gene70998 |
| chr8.4 | exon | 37472398 | 37472429 | 37472398 | ID=MS.gene70998.t1.exon1;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37472398 | 37472429 | 37472398 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37473782 | 37474084 | 37473782 | ID=MS.gene70998.t1.exon2;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37473782 | 37474084 | 37473782 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37474206 | 37474305 | 37474206 | ID=MS.gene70998.t1.exon3;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37474206 | 37474305 | 37474206 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37474793 | 37474966 | 37474793 | ID=MS.gene70998.t1.exon4;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37474793 | 37474966 | 37474793 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37475516 | 37475695 | 37475516 | ID=MS.gene70998.t1.exon5;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37475516 | 37475695 | 37475516 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37477002 | 37477156 | 37477002 | ID=MS.gene70998.t1.exon6;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37477002 | 37477156 | 37477002 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37478772 | 37478862 | 37478772 | ID=MS.gene70998.t1.exon7;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37478772 | 37478862 | 37478772 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37478959 | 37479122 | 37478959 | ID=MS.gene70998.t1.exon8;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37478959 | 37479122 | 37478959 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37479677 | 37479731 | 37479677 | ID=MS.gene70998.t1.exon9;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37479677 | 37479731 | 37479677 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37480155 | 37480277 | 37480155 | ID=MS.gene70998.t1.exon10;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37480155 | 37480277 | 37480155 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37480363 | 37480458 | 37480363 | ID=MS.gene70998.t1.exon11;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37480363 | 37480458 | 37480363 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37481667 | 37481794 | 37481667 | ID=MS.gene70998.t1.exon12;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37481667 | 37481794 | 37481667 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37482121 | 37482225 | 37482121 | ID=MS.gene70998.t1.exon13;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37482121 | 37482225 | 37482121 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37482329 | 37482588 | 37482329 | ID=MS.gene70998.t1.exon14;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37482329 | 37482588 | 37482329 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37483432 | 37483698 | 37483432 | ID=MS.gene70998.t1.exon15;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37483432 | 37483698 | 37483432 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37483785 | 37483960 | 37483785 | ID=MS.gene70998.t1.exon16;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37483785 | 37483960 | 37483785 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37484380 | 37484484 | 37484380 | ID=MS.gene70998.t1.exon17;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37484380 | 37484484 | 37484380 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| chr8.4 | exon | 37486863 | 37486949 | 37486863 | ID=MS.gene70998.t1.exon18;Parent=MS.gene70998.t1 |
| chr8.4 | CDS | 37486863 | 37486949 | 37486863 | ID=cds.MS.gene70998.t1;Parent=MS.gene70998.t1 |
| Gene Sequence |
| Protein sequence |
