Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71447.t1 | XP_003590794.1 | 85.6 | 250 | 36 | 0 | 1 | 250 | 1 | 250 | 1.60E-114 | 422.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71447.t1 | Q682V0 | 63.0 | 192 | 71 | 0 | 4 | 195 | 22 | 213 | 5.7e-68 | 259.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71447.t1 | G7I3Z1 | 85.6 | 250 | 36 | 0 | 1 | 250 | 1 | 250 | 1.2e-114 | 422.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055150 | MS.gene71447 | 0.801648 | 8.16E-49 | -1.69E-46 |
| MS.gene05884 | MS.gene71447 | 0.800503 | 1.40E-48 | -1.69E-46 |
| MS.gene059436 | MS.gene71447 | 0.832927 | 7.15E-56 | -1.69E-46 |
| MS.gene059514 | MS.gene71447 | 0.842719 | 2.18E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71447.t1 | MTR_1g075330 | 93.200 | 250 | 17 | 0 | 1 | 250 | 1 | 250 | 3.26e-172 | 477 |
| MS.gene71447.t1 | MTR_1g075380 | 88.889 | 63 | 7 | 0 | 246 | 308 | 9 | 71 | 2.98e-30 | 109 |
| MS.gene71447.t1 | MTR_1g075340 | 85.714 | 63 | 9 | 0 | 246 | 308 | 8 | 70 | 1.11e-29 | 108 |
| MS.gene71447.t1 | MTR_1g075340 | 85.714 | 63 | 9 | 0 | 246 | 308 | 8 | 70 | 1.11e-29 | 108 |
| MS.gene71447.t1 | MTR_1g075410 | 84.127 | 63 | 10 | 0 | 246 | 308 | 10 | 72 | 1.78e-29 | 107 |
| MS.gene71447.t1 | MTR_5g090250 | 82.540 | 63 | 11 | 0 | 246 | 308 | 8 | 70 | 2.71e-27 | 102 |
| MS.gene71447.t1 | MTR_5g090250 | 82.540 | 63 | 11 | 0 | 246 | 308 | 8 | 70 | 2.71e-27 | 102 |
| MS.gene71447.t1 | MTR_1g070335 | 57.143 | 63 | 27 | 0 | 246 | 308 | 8 | 70 | 3.41e-16 | 72.4 |
| MS.gene71447.t1 | MTR_5g045470 | 52.381 | 63 | 30 | 0 | 246 | 308 | 7 | 69 | 1.14e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71447.t1 | AT3G23100 | 57.676 | 241 | 97 | 2 | 4 | 243 | 22 | 258 | 2.36e-95 | 283 |
| MS.gene71447.t1 | AT3G23100 | 57.676 | 241 | 97 | 2 | 4 | 243 | 22 | 258 | 2.36e-95 | 283 |
| MS.gene71447.t1 | AT1G61410 | 54.955 | 111 | 45 | 3 | 129 | 238 | 1 | 107 | 1.19e-27 | 104 |
| MS.gene71447.t1 | AT5G43580 | 48.052 | 77 | 38 | 1 | 232 | 308 | 25 | 99 | 2.65e-16 | 73.6 |
| MS.gene71447.t1 | AT2G38870 | 52.381 | 63 | 30 | 0 | 246 | 308 | 8 | 70 | 3.03e-15 | 69.7 |
| MS.gene71447.t1 | AT2G38900 | 45.588 | 68 | 35 | 1 | 241 | 308 | 23 | 88 | 8.08e-12 | 60.8 |
| MS.gene71447.t1 | AT3G46860 | 39.024 | 82 | 43 | 1 | 227 | 308 | 11 | 85 | 2.61e-11 | 59.3 |
| MS.gene71447.t1 | AT2G38900 | 46.032 | 63 | 34 | 0 | 246 | 308 | 11 | 73 | 3.47e-11 | 58.5 |
Find 71 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTGTCTGAGCGGTATT+TGG | 0.234417 | 1.3:+53907231 | MS.gene71447:CDS |
| CAACGACAGGGTTTGGGTTT+GGG | 0.289389 | 1.3:+53912041 | MS.gene71447:CDS |
| GAATTGTCTGAGCGGTATTT+GGG | 0.316473 | 1.3:+53907232 | MS.gene71447:CDS |
| GCAACGACAGGGTTTGGGTT+TGG | 0.327218 | 1.3:+53912040 | MS.gene71447:CDS |
| GAAAACTACTGCAGAAATAT+TGG | 0.339315 | 1.3:+53908132 | MS.gene71447:CDS |
| GACACTTTCTATCCAATTGT+TGG | 0.347121 | 1.3:-53912093 | None:intergenic |
| ACTTACGCAACGACAGGGTT+TGG | 0.351229 | 1.3:+53912034 | MS.gene71447:CDS |
| CTTACGCAACGACAGGGTTT+GGG | 0.360903 | 1.3:+53912035 | MS.gene71447:CDS |
| GTCACTCAGGTTCCAACAAT+TGG | 0.363160 | 1.3:+53912081 | MS.gene71447:CDS |
| TTCAAATTCCACCCTTTCAT+TGG | 0.363589 | 1.3:-53910242 | None:intergenic |
| CACGAATATTGATTCTTCTT+CGG | 0.369660 | 1.3:-53906994 | None:intergenic |
| TATTTGGGGTTTCGACAACC+TGG | 0.386028 | 1.3:+53907247 | MS.gene71447:CDS |
| GTTTATGCATTTGCTGATGC+TGG | 0.406007 | 1.3:+53907274 | MS.gene71447:CDS |
| TCACCGACGGTTTCACCGCT+TGG | 0.415773 | 1.3:+53907054 | MS.gene71447:CDS |
| TGGGTTTGGGTTAATAAAGA+TGG | 0.418377 | 1.3:+53912054 | MS.gene71447:CDS |
| CCTTCCACTCCAACCAACTC+TGG | 0.454716 | 1.3:-53911928 | None:intergenic |
| CAATATTCGTGAAGGGTACA+TGG | 0.456988 | 1.3:+53907006 | MS.gene71447:CDS |
| TGCTGCTCAGTGGGACCAGC+CGG | 0.460985 | 1.3:+53907195 | MS.gene71447:CDS |
| TTCTCATGGATGCAAACATA+AGG | 0.465523 | 1.3:+53908158 | MS.gene71447:CDS |
| AATGCCATCATTGTGCTAGA+AGG | 0.471882 | 1.3:+53911994 | MS.gene71447:CDS |
| ACTAGTTCTTCGAAGGATGT+TGG | 0.485278 | 1.3:+53910766 | MS.gene71447:CDS |
| ATGCTGGTGATGCTCATAAG+AGG | 0.491015 | 1.3:+53907290 | MS.gene71447:CDS |
| GAAGCAGCGTGCTGCTCAGT+GGG | 0.494105 | 1.3:+53907186 | MS.gene71447:CDS |
| AGCGGTGAAACCGTCGGTGA+TGG | 0.496517 | 1.3:-53907051 | None:intergenic |
| AGAAATATTGGACTTTCTCA+TGG | 0.496713 | 1.3:+53908144 | MS.gene71447:CDS |
| CCAGAGTTGGTTGGAGTGGA+AGG | 0.515293 | 1.3:+53911928 | MS.gene71447:CDS |
| TGTTCTCAGCTAAGAGCTCA+TGG | 0.516002 | 1.3:+53911905 | MS.gene71447:intron |
| GAATGACACTGCATTGGAGA+TGG | 0.516889 | 1.3:+53908083 | MS.gene71447:CDS |
| CCGACGACTTACGCAACGAC+AGG | 0.517888 | 1.3:+53912028 | MS.gene71447:CDS |
| GTGAGAGAATAGCCAATGAA+AGG | 0.523831 | 1.3:+53910230 | MS.gene71447:CDS |
| GTTGGTTGGAGTGGAAGGAA+AGG | 0.527079 | 1.3:+53911933 | MS.gene71447:CDS |
| AGATCCTTCTAGCACAATGA+TGG | 0.537596 | 1.3:-53911998 | None:intergenic |
| AGGGAGGAATGACACTGCAT+TGG | 0.540751 | 1.3:+53908077 | MS.gene71447:CDS |
| CCTCTTGAAGAGATTTGTTG+CGG | 0.550441 | 1.3:-53910663 | None:intergenic |
| TGAGAGAATAGCCAATGAAA+GGG | 0.557370 | 1.3:+53910231 | MS.gene71447:CDS |
| AGAAGAATCAATATTCGTGA+AGG | 0.557463 | 1.3:+53906998 | MS.gene71447:CDS |
| CCACGTACTCTTCCACCGGC+TGG | 0.560726 | 1.3:-53907210 | None:intergenic |
| GTTGTCGTGGACGTTTGAGA+AGG | 0.561969 | 1.3:+53908057 | MS.gene71447:intron |
| GTGTATTACTAGTTCTTCGA+AGG | 0.563762 | 1.3:+53910759 | MS.gene71447:CDS |
| ATGGCCAGAGTTGGTTGGAG+TGG | 0.564909 | 1.3:+53911924 | MS.gene71447:CDS |
| ATTAGAAGCTGAGAAGTGCT+TGG | 0.565059 | 1.3:+53910201 | MS.gene71447:CDS |
| CCGCAACAAATCTCTTCAAG+AGG | 0.572328 | 1.3:+53910663 | MS.gene71447:CDS |
| AATTCAGAGGGAGAATCCAT+TGG | 0.572843 | 1.3:+53911969 | MS.gene71447:CDS |
| TAAGAGCTCATGGCCAGAGT+TGG | 0.573671 | 1.3:+53911915 | MS.gene71447:CDS |
| AGCTCATGGCCAGAGTTGGT+TGG | 0.578782 | 1.3:+53911919 | MS.gene71447:CDS |
| TTCAACCTCTCCATCACCGA+CGG | 0.579618 | 1.3:+53907041 | MS.gene71447:CDS |
| ATTTGGGGTTTCGACAACCT+GGG | 0.580929 | 1.3:+53907248 | MS.gene71447:CDS |
| TTGTCGTGGACGTTTGAGAA+GGG | 0.583754 | 1.3:+53908058 | MS.gene71447:CDS |
| TAAAGATGGAATTGTCACTC+AGG | 0.589757 | 1.3:+53912068 | MS.gene71447:CDS |
| TGTGAATGTTGCAGTTGTCG+TGG | 0.589936 | 1.3:+53908044 | MS.gene71447:intron |
| TGCTCAGTGGGACCAGCCGG+TGG | 0.593157 | 1.3:+53907198 | MS.gene71447:CDS |
| GAAGAATCAATATTCGTGAA+GGG | 0.593164 | 1.3:+53906999 | MS.gene71447:CDS |
| AGCAGAAGCTACAATTCAGA+GGG | 0.593359 | 1.3:+53911957 | MS.gene71447:CDS |
| TAGCAGAAGCTACAATTCAG+AGG | 0.596029 | 1.3:+53911956 | MS.gene71447:CDS |
| AATTCCACGTACTCTTCCAC+CGG | 0.602320 | 1.3:-53907214 | None:intergenic |
| TGAAGCAGCGTGCTGCTCAG+TGG | 0.607329 | 1.3:+53907185 | MS.gene71447:CDS |
| TGAATCTCAAATCTATACAA+AGG | 0.608331 | 1.3:+53910261 | MS.gene71447:CDS |
| TGAAACCGTCGGTGATGGAG+AGG | 0.615675 | 1.3:-53907046 | None:intergenic |
| CCTGTCGTTGCGTAAGTCGT+CGG | 0.616539 | 1.3:-53912028 | None:intergenic |
| CCAGCCGGTGGAAGAGTACG+TGG | 0.619854 | 1.3:+53907210 | MS.gene71447:CDS |
| CGACGACTTACGCAACGACA+GGG | 0.619969 | 1.3:+53912029 | MS.gene71447:CDS |
| TCGTGGACGTTTGAGAAGGG+AGG | 0.620819 | 1.3:+53908061 | MS.gene71447:CDS |
| GTTCCAAGCGGTGAAACCGT+CGG | 0.634326 | 1.3:-53907057 | None:intergenic |
| TTCACCGCTTGGAACTGCAA+CGG | 0.635648 | 1.3:+53907065 | MS.gene71447:CDS |
| GCAAATGCATAAACAGACCC+AGG | 0.643154 | 1.3:-53907265 | None:intergenic |
| AATTGTCTGAGCGGTATTTG+GGG | 0.650141 | 1.3:+53907233 | MS.gene71447:CDS |
| ACAATGATGGCATTCACCAA+TGG | 0.650325 | 1.3:-53911985 | None:intergenic |
| GAGAATAGCCAATGAAAGGG+TGG | 0.673255 | 1.3:+53910234 | MS.gene71447:CDS |
| TGCTGGTGATGCTCATAAGA+GGG | 0.680650 | 1.3:+53907291 | MS.gene71447:CDS |
| AGTACCGTTGCAGTTCCAAG+CGG | 0.722808 | 1.3:-53907069 | None:intergenic |
| AGTACGTGGAATTGTCTGAG+CGG | 0.752537 | 1.3:+53907224 | MS.gene71447:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAATATCAAAAAAAAAA+TGG | - | chr1.3:53909648-53909667 | None:intergenic | 10.0% |
| !! | AAACAGAATGATATAAAAAA+TGG | - | chr1.3:53907963-53907982 | None:intergenic | 15.0% |
| !! | AATATCAAAAAAAAAATGGT+TGG | - | chr1.3:53909644-53909663 | None:intergenic | 15.0% |
| !! | AATTCCAATTTCAAATTTAA+AGG | - | chr1.3:53908783-53908802 | None:intergenic | 15.0% |
| !! | ATAAAAGTTAGTTAGTTAAT+TGG | - | chr1.3:53910089-53910108 | None:intergenic | 15.0% |
| !! | ATGTTCAAAACTAAATAAAA+GGG | - | chr1.3:53909837-53909856 | None:intergenic | 15.0% |
| !! | CAGTAATTGATAAATAAATA+CGG | - | chr1.3:53911227-53911246 | None:intergenic | 15.0% |
| !! | TCTATAATCTATAATATATG+TGG | + | chr1.3:53911110-53911129 | MS.gene71447:intron | 15.0% |
| !! | TCTTCTATTTATGTATAAAA+GGG | - | chr1.3:53909927-53909946 | None:intergenic | 15.0% |
| !!! | AATTTTTTTAGGTAACAAAA+TGG | - | chr1.3:53911507-53911526 | None:intergenic | 15.0% |
| !!! | ATCAATTATTTTATGTGAAA+TGG | + | chr1.3:53908385-53908404 | MS.gene71447:intron | 15.0% |
| !!! | ATTACCTTTAAATTTGAAAT+TGG | + | chr1.3:53908776-53908795 | MS.gene71447:intron | 15.0% |
| !!! | ATTTAAAATTTCTACCTAAA+TGG | - | chr1.3:53908667-53908686 | None:intergenic | 15.0% |
| !!! | ATTTTTACAAAAGATGATTA+AGG | - | chr1.3:53909686-53909705 | None:intergenic | 15.0% |
| !!! | CTTTTCTCAAATTATTATTA+AGG | - | chr1.3:53907368-53907387 | None:intergenic | 15.0% |
| !!! | TAGAAATTTTAAATTACAGT+TGG | + | chr1.3:53908673-53908692 | MS.gene71447:intron | 15.0% |
| !!! | TAGTGTTAATTTTTTGAAAT+AGG | + | chr1.3:53907651-53907670 | MS.gene71447:intron | 15.0% |
| !!! | TTATCAAAAAATACATTTTG+TGG | - | chr1.3:53909086-53909105 | None:intergenic | 15.0% |
| !! | AAAATGCATATAATCAAACA+TGG | - | chr1.3:53909869-53909888 | None:intergenic | 20.0% |
| !! | AAACTAGAAAAATAAGAAAC+AGG | - | chr1.3:53909300-53909319 | None:intergenic | 20.0% |
| !! | AAGGTAATTAATAATGTAAG+AGG | - | chr1.3:53908764-53908783 | None:intergenic | 20.0% |
| !! | AATAGGAATGTAATGTTTAA+CGG | + | chr1.3:53908333-53908352 | MS.gene71447:intron | 20.0% |
| !! | AATTGCAAAAAGAAAGAAAA+AGG | + | chr1.3:53911727-53911746 | MS.gene71447:intron | 20.0% |
| !! | AGTTTCAATATCCATAAAAT+AGG | - | chr1.3:53909235-53909254 | None:intergenic | 20.0% |
| !! | ATAATATGAAGTGAAATAGA+AGG | + | chr1.3:53907624-53907643 | MS.gene71447:intron | 20.0% |
| !! | ATACAAGAAAAGATAAGAAT+TGG | - | chr1.3:53911376-53911395 | None:intergenic | 20.0% |
| !! | CTCTTCTATTTATGTATAAA+AGG | - | chr1.3:53909928-53909947 | None:intergenic | 20.0% |
| !! | GAACACAATATGATTAAATA+AGG | - | chr1.3:53908636-53908655 | None:intergenic | 20.0% |
| !! | GATGTTCAAAACTAAATAAA+AGG | - | chr1.3:53909838-53909857 | None:intergenic | 20.0% |
| !! | TAACAAAATGGTTATAGAAT+TGG | - | chr1.3:53911495-53911514 | None:intergenic | 20.0% |
| !! | TCTTAAACTTGAGTAAATAT+GGG | + | chr1.3:53909149-53909168 | MS.gene71447:intron | 20.0% |
| !! | TGAAACTTAAAATATGTCAA+TGG | + | chr1.3:53909248-53909267 | MS.gene71447:intron | 20.0% |
| !! | TGAAATATACTATACTATCA+AGG | + | chr1.3:53908832-53908851 | MS.gene71447:intron | 20.0% |
| !! | TGTAATAAAAAAAACCCATA+AGG | + | chr1.3:53911638-53911657 | MS.gene71447:intron | 20.0% |
| !!! | AAGTTTTGATTTTGATTTGT+GGG | + | chr1.3:53907128-53907147 | MS.gene71447:intron | 20.0% |
| !!! | AGTCGATTTGATAATAATAT+AGG | - | chr1.3:53911176-53911195 | None:intergenic | 20.0% |
| !!! | AGTGTATTTATAGTAGTTTT+TGG | - | chr1.3:53911670-53911689 | None:intergenic | 20.0% |
| !!! | GCATACATGTTAATTTTTTT+AGG | - | chr1.3:53911518-53911537 | None:intergenic | 20.0% |
| !!! | TGTTGAATTTTTTTTAGCAT+CGG | + | chr1.3:53907153-53907172 | MS.gene71447:intron | 20.0% |
| !!! | TTATGGGTTTTTTTTATTAC+AGG | - | chr1.3:53911639-53911658 | None:intergenic | 20.0% |
| ! | AAACATAGCTAGAACTAAAT+TGG | + | chr1.3:53908598-53908617 | MS.gene71447:intron | 25.0% |
| ! | AAAGTTAGTTAGTTAATTGG+AGG | - | chr1.3:53910086-53910105 | None:intergenic | 25.0% |
| ! | AACATAGCTAGAACTAAATT+GGG | + | chr1.3:53908599-53908618 | MS.gene71447:intron | 25.0% |
| ! | AACTTAAAATATGTCAATGG+AGG | + | chr1.3:53909251-53909270 | MS.gene71447:intron | 25.0% |
| ! | AATGTTTAACGGTGTAAAAT+TGG | + | chr1.3:53908344-53908363 | MS.gene71447:intron | 25.0% |
| ! | AATTGAATACAACAACAAAC+TGG | - | chr1.3:53908458-53908477 | None:intergenic | 25.0% |
| ! | AGTGAGATGAAATTCAAAAA+AGG | - | chr1.3:53909118-53909137 | None:intergenic | 25.0% |
| ! | ATAATACACAAGTCAAATCA+TGG | + | chr1.3:53911590-53911609 | MS.gene71447:intron | 25.0% |
| ! | CAAAAAAAAAATGGTTGGAT+TGG | - | chr1.3:53909639-53909658 | None:intergenic | 25.0% |
| ! | CAAATAGTCATACATATTGA+AGG | + | chr1.3:53911754-53911773 | MS.gene71447:intron | 25.0% |
| ! | CACACATATTAAATCCAAAA+AGG | + | chr1.3:53911433-53911452 | MS.gene71447:intron | 25.0% |
| ! | CTTAAACTTGAGTAAATATG+GGG | + | chr1.3:53909150-53909169 | MS.gene71447:intron | 25.0% |
| ! | GAAAAACAAATACATTGGTA+AGG | - | chr1.3:53907862-53907881 | None:intergenic | 25.0% |
| ! | GAAATGAAACAATGATATAC+AGG | - | chr1.3:53908436-53908455 | None:intergenic | 25.0% |
| ! | GTCTTAAACTTGAGTAAATA+TGG | + | chr1.3:53909148-53909167 | MS.gene71447:intron | 25.0% |
| ! | GTTAATATCAACTACTGTAA+TGG | + | chr1.3:53909339-53909358 | MS.gene71447:intron | 25.0% |
| ! | GTTTATTATGGTTATTGTCT+TGG | + | chr1.3:53908279-53908298 | MS.gene71447:intron | 25.0% |
| ! | TAAAACAACAAGGTAAAATG+AGG | - | chr1.3:53910469-53910488 | None:intergenic | 25.0% |
| ! | TACATATTGAAGGATCAAAA+AGG | + | chr1.3:53911764-53911783 | MS.gene71447:intron | 25.0% |
| ! | TACGAAAAATAACAAACAGT+TGG | - | chr1.3:53907323-53907342 | None:intergenic | 25.0% |
| ! | TCATGAAAATGTCAAATTTC+AGG | - | chr1.3:53908815-53908834 | None:intergenic | 25.0% |
| ! | TCGAAGAAAAACAAATACAT+TGG | - | chr1.3:53907867-53907886 | None:intergenic | 25.0% |
| ! | TGAAGATAGATTAGTGAAAA+GGG | - | chr1.3:53907109-53907128 | None:intergenic | 25.0% |
| ! | TGAATCTCAAATCTATACAA+AGG | + | chr1.3:53910261-53910280 | MS.gene71447:CDS | 25.0% |
| ! | TGATCCAGATATCTATTTAA+GGG | - | chr1.3:53907557-53907576 | None:intergenic | 25.0% |
| ! | TGCAAATCTAAAAACAATGT+CGG | + | chr1.3:53911079-53911098 | MS.gene71447:intron | 25.0% |
| ! | TGTACAAAATTCACTTAAGT+TGG | + | chr1.3:53910909-53910928 | MS.gene71447:intron | 25.0% |
| ! | TTCAAAACTAAATAAAAGGG+AGG | - | chr1.3:53909834-53909853 | None:intergenic | 25.0% |
| ! | TTGAAGATAGATTAGTGAAA+AGG | - | chr1.3:53907110-53907129 | None:intergenic | 25.0% |
| ! | TTGATCCAGATATCTATTTA+AGG | - | chr1.3:53907558-53907577 | None:intergenic | 25.0% |
| !! | AATAAGTTGGCTGTTATTTA+TGG | + | chr1.3:53908954-53908973 | MS.gene71447:intron | 25.0% |
| !! | AATTGGAGGTTGTTATTATA+AGG | - | chr1.3:53910072-53910091 | None:intergenic | 25.0% |
| !! | ATACAGGTCAAAATTTTCAA+TGG | - | chr1.3:53910328-53910347 | None:intergenic | 25.0% |
| !! | GAATCAATATGCCTATTTTA+TGG | + | chr1.3:53909221-53909240 | MS.gene71447:intron | 25.0% |
| !! | GTTTCTCGATTTGTTTATTA+TGG | + | chr1.3:53908267-53908286 | MS.gene71447:intron | 25.0% |
| !! | TATGTGAAATGGTTTTTGAT+AGG | + | chr1.3:53908396-53908415 | MS.gene71447:intron | 25.0% |
| !!! | AAAAGCATCATAAAACAACA+AGG | - | chr1.3:53910479-53910498 | None:intergenic | 25.0% |
| !!! | AGTTTTGATTTTGATTTGTG+GGG | + | chr1.3:53907129-53907148 | MS.gene71447:intron | 25.0% |
| !!! | ATTGAAAATTTTGACCTGTA+TGG | + | chr1.3:53910327-53910346 | MS.gene71447:intron | 25.0% |
| !!! | CAAGTTTTGATTTTGATTTG+TGG | + | chr1.3:53907127-53907146 | MS.gene71447:intron | 25.0% |
| !!! | GTATAAAAGGGTTATTTCTT+TGG | - | chr1.3:53909915-53909934 | None:intergenic | 25.0% |
| !!! | GTTATTCTGTTTTAGTTTCT+GGG | + | chr1.3:53910577-53910596 | MS.gene71447:intron | 25.0% |
| !!! | TGTTATTCTGTTTTAGTTTC+TGG | + | chr1.3:53910576-53910595 | MS.gene71447:intron | 25.0% |
| !!! | TGTTTTGGTAGTTAGAATAA+TGG | - | chr1.3:53910133-53910152 | None:intergenic | 25.0% |
| !!! | TTAGTTTTGAACATCATAGT+TGG | + | chr1.3:53909843-53909862 | MS.gene71447:intron | 25.0% |
| AAAAATAACAAACAGTTGGC+AGG | - | chr1.3:53907319-53907338 | None:intergenic | 30.0% | |
| AAAACTAAATAAAAGGGAGG+AGG | - | chr1.3:53909831-53909850 | None:intergenic | 30.0% | |
| AAAATGTCTGATGAATGCAA+AGG | + | chr1.3:53911793-53911812 | MS.gene71447:intron | 30.0% | |
| AAACTAAATAAAAGGGAGGA+GGG | - | chr1.3:53909830-53909849 | None:intergenic | 30.0% | |
| AAGGCATGTGATATACAAAA+GGG | - | chr1.3:53908899-53908918 | None:intergenic | 30.0% | |
| AATCTAAAAACAATGTCGGT+AGG | + | chr1.3:53911083-53911102 | MS.gene71447:intron | 30.0% | |
| ACAAACACGTCATAAAGATA+AGG | - | chr1.3:53911412-53911431 | None:intergenic | 30.0% | |
| AGAAATATTGGACTTTCTCA+TGG | + | chr1.3:53908144-53908163 | MS.gene71447:CDS | 30.0% | |
| AGAAGAATCAATATTCGTGA+AGG | + | chr1.3:53906998-53907017 | MS.gene71447:CDS | 30.0% | |
| AGGTAAAATGAGGTCAATAT+TGG | - | chr1.3:53910459-53910478 | None:intergenic | 30.0% | |
| AGTAGTGACTCTATTATGAA+GGG | - | chr1.3:53909973-53909992 | None:intergenic | 30.0% | |
| ATAGTAAAGGCTTATCAAAC+CGG | + | chr1.3:53907496-53907515 | MS.gene71447:intron | 30.0% | |
| ATGTGAATGACTGTATGAAT+CGG | - | chr1.3:53909582-53909601 | None:intergenic | 30.0% | |
| GAAAACTACTGCAGAAATAT+TGG | + | chr1.3:53908132-53908151 | MS.gene71447:CDS | 30.0% | |
| GAAATGAGACACAAATAAGT+TGG | + | chr1.3:53908941-53908960 | MS.gene71447:intron | 30.0% | |
| GAAGAATCAATATTCGTGAA+GGG | + | chr1.3:53906999-53907018 | MS.gene71447:CDS | 30.0% | |
| GAATCTCATAAGTTGTTGAA+CGG | - | chr1.3:53911617-53911636 | None:intergenic | 30.0% | |
| GATCCAGATATCTATTTAAG+GGG | - | chr1.3:53907556-53907575 | None:intergenic | 30.0% | |
| GGAAGAAGTTGTCATAAAAA+CGG | + | chr1.3:53910159-53910178 | MS.gene71447:intron | 30.0% | |
| GTAATTATATGTGTCAGTGT+CGG | + | chr1.3:53907401-53907420 | MS.gene71447:intron | 30.0% | |
| GTGCAGTAAACATATAGTAA+AGG | + | chr1.3:53907483-53907502 | MS.gene71447:intron | 30.0% | |
| GTGTAAAATTGGAGTTCAAA+GGG | + | chr1.3:53908355-53908374 | MS.gene71447:intron | 30.0% | |
| GTGTTCATATTCTACCATTT+AGG | + | chr1.3:53908650-53908669 | MS.gene71447:intron | 30.0% | |
| GTTATAGAATGTGGTATGAT+TGG | + | chr1.3:53907449-53907468 | MS.gene71447:intron | 30.0% | |
| TAGACTCACATGACAAATTA+GGG | + | chr1.3:53910819-53910838 | MS.gene71447:intron | 30.0% | |
| TAGTAGTGACTCTATTATGA+AGG | - | chr1.3:53909974-53909993 | None:intergenic | 30.0% | |
| TATCAACAGATCATAACAGT+TGG | + | chr1.3:53908987-53909006 | MS.gene71447:intron | 30.0% | |
| TATTACCATGCTTGATTGTA+GGG | - | chr1.3:53911044-53911063 | None:intergenic | 30.0% | |
| TGATATCTCTGTCTCATAAT+TGG | + | chr1.3:53910950-53910969 | MS.gene71447:intron | 30.0% | |
| TTCTCTCAAGATTAGAATTG+AGG | - | chr1.3:53908573-53908592 | None:intergenic | 30.0% | |
| TTGTACAAATGTGAAATCCA+TGG | - | chr1.3:53910896-53910915 | None:intergenic | 30.0% | |
| TTTGCAATTCTTCTTGTGTT+TGG | - | chr1.3:53911716-53911735 | None:intergenic | 30.0% | |
| ! | AAAGTGAAACCATAGTTCTA+AGG | - | chr1.3:53910995-53911014 | None:intergenic | 30.0% |
| ! | AGTAGTTGATATTAACGATG+TGG | - | chr1.3:53909335-53909354 | None:intergenic | 30.0% |
| ! | ATGGTTTTTGATAGGTGAAA+TGG | + | chr1.3:53908404-53908423 | MS.gene71447:intron | 30.0% |
| ! | GAACTAGTAATACACTTTTG+AGG | - | chr1.3:53910754-53910773 | None:intergenic | 30.0% |
| ! | GTAGTTGATATTAACGATGT+GGG | - | chr1.3:53909334-53909353 | None:intergenic | 30.0% |
| ! | TATTTTGCATGACTGTTCAA+AGG | - | chr1.3:53911310-53911329 | None:intergenic | 30.0% |
| ! | TCTGTTATTATCAAAGCGTT+GGG | - | chr1.3:53911284-53911303 | None:intergenic | 30.0% |
| ! | TTGCGTGATAACGTAAAATT+TGG | + | chr1.3:53911562-53911581 | MS.gene71447:intron | 30.0% |
| ! | TTTTCAAATCCTGCTTGATT+TGG | + | chr1.3:53909778-53909797 | MS.gene71447:intron | 30.0% |
| !! | AAGTGAAACCATAGTTCTAA+GGG | - | chr1.3:53910994-53911013 | None:intergenic | 30.0% |
| !! | ATTTGTTTTTCTTCGATGTG+AGG | + | chr1.3:53907871-53907890 | MS.gene71447:intron | 30.0% |
| !! | CACGAATATTGATTCTTCTT+CGG | - | chr1.3:53906997-53907016 | None:intergenic | 30.0% |
| !! | GAAGTTGTCTTTTTCATCTT+TGG | - | chr1.3:53909048-53909067 | None:intergenic | 30.0% |
| !! | GGATGATAATGGTAACAAAT+AGG | + | chr1.3:53908316-53908335 | MS.gene71447:intron | 30.0% |
| !! | TTCTTTGGAATCGAATTCTT+GGG | - | chr1.3:53909900-53909919 | None:intergenic | 30.0% |
| !! | TTTCTTTGGAATCGAATTCT+TGG | - | chr1.3:53909901-53909920 | None:intergenic | 30.0% |
| !! | TTTGTTTTTCTTCGATGTGA+GGG | + | chr1.3:53907872-53907891 | MS.gene71447:intron | 30.0% |
| !! | TTTTGGGCTAGATATTTCAT+CGG | + | chr1.3:53907899-53907918 | MS.gene71447:intron | 30.0% |
| !!! | ATTGGTAAGGTTTTAAACAG+AGG | - | chr1.3:53907849-53907868 | None:intergenic | 30.0% |
| !!! | CAAAACTCTCAGTTTTTTCT+GGG | - | chr1.3:53910696-53910715 | None:intergenic | 30.0% |
| !!! | TCAAAACTCTCAGTTTTTTC+TGG | - | chr1.3:53910697-53910716 | None:intergenic | 30.0% |
| AAACACGAAACATACAAGTG+AGG | - | chr1.3:53908251-53908270 | None:intergenic | 35.0% | |
| AAACAGGTAAATCTTTGAGC+TGG | + | chr1.3:53909479-53909498 | MS.gene71447:intron | 35.0% | |
| AACAGGTAAATCTTTGAGCT+GGG | + | chr1.3:53909480-53909499 | MS.gene71447:intron | 35.0% | |
| AACATAACCTAATGCTAAGC+TGG | + | chr1.3:53908700-53908719 | MS.gene71447:intron | 35.0% | |
| ACTATCAAGGATCTACTAAG+TGG | + | chr1.3:53908845-53908864 | MS.gene71447:intron | 35.0% | |
| AGAACCATCATATGGCAATA+AGG | - | chr1.3:53909195-53909214 | None:intergenic | 35.0% | |
| AGACTCACATGACAAATTAG+GGG | + | chr1.3:53910820-53910839 | MS.gene71447:intron | 35.0% | |
| ATATGGCAATAAGGAACATG+TGG | - | chr1.3:53909186-53909205 | None:intergenic | 35.0% | |
| ATGAGACAGAGATATCACAA+GGG | - | chr1.3:53910947-53910966 | None:intergenic | 35.0% | |
| ATTACCATGCTTGATTGTAG+GGG | - | chr1.3:53911043-53911062 | None:intergenic | 35.0% | |
| CAACCCCTTAAATAGATATC+TGG | + | chr1.3:53907550-53907569 | MS.gene71447:intron | 35.0% | |
| CAAGGCATGTGATATACAAA+AGG | - | chr1.3:53908900-53908919 | None:intergenic | 35.0% | |
| CACCAACACTTCTAATCAAA+AGG | - | chr1.3:53907430-53907449 | None:intergenic | 35.0% | |
| CACCATTGAATATTCAGTCA+CGG | + | chr1.3:53907987-53908006 | MS.gene71447:intron | 35.0% | |
| CATTAATAGCCAGTAGTGAA+AGG | - | chr1.3:53908020-53908039 | None:intergenic | 35.0% | |
| CTAGACTCACATGACAAATT+AGG | + | chr1.3:53910818-53910837 | MS.gene71447:intron | 35.0% | |
| CTCTGTTATTATCAAAGCGT+TGG | - | chr1.3:53911285-53911304 | None:intergenic | 35.0% | |
| CTTGACAATATGTTCTCACT+AGG | - | chr1.3:53911470-53911489 | None:intergenic | 35.0% | |
| GATTCATACAGTCATTCACA+TGG | + | chr1.3:53909581-53909600 | MS.gene71447:intron | 35.0% | |
| GGTGTAAAATTGGAGTTCAA+AGG | + | chr1.3:53908354-53908373 | MS.gene71447:intron | 35.0% | |
| GTATTACCATGCTTGATTGT+AGG | - | chr1.3:53911045-53911064 | None:intergenic | 35.0% | |
| TAAAATTGGAGTTCAAAGGG+AGG | + | chr1.3:53908358-53908377 | MS.gene71447:intron | 35.0% | |
| TAAAGATGGAATTGTCACTC+AGG | + | chr1.3:53912068-53912087 | MS.gene71447:CDS | 35.0% | |
| TAAATGCACCCTTAGAACTA+TGG | + | chr1.3:53910983-53911002 | MS.gene71447:intron | 35.0% | |
| TATCTCTGTCTCATAATTGG+TGG | + | chr1.3:53910953-53910972 | MS.gene71447:intron | 35.0% | |
| TATGAGACAGAGATATCACA+AGG | - | chr1.3:53910948-53910967 | None:intergenic | 35.0% | |
| TATTATGAAGGGTAAACCCT+CGG | - | chr1.3:53909962-53909981 | None:intergenic | 35.0% | |
| TCAAAGATTTACCTGTTTCC+AGG | - | chr1.3:53909477-53909496 | None:intergenic | 35.0% | |
| TGAGAGAATAGCCAATGAAA+GGG | + | chr1.3:53910231-53910250 | MS.gene71447:CDS | 35.0% | |
| TGTATGAATATGACCAGACA+AGG | - | chr1.3:53908918-53908937 | None:intergenic | 35.0% | |
| TGTTCCTTATTGCCATATGA+TGG | + | chr1.3:53909188-53909207 | MS.gene71447:intron | 35.0% | |
| TTAAGTAGTGCTTGCGTTAA+TGG | + | chr1.3:53907731-53907750 | MS.gene71447:intron | 35.0% | |
| TTCAAATTCCACCCTTTCAT+TGG | - | chr1.3:53910245-53910264 | None:intergenic | 35.0% | |
| TTCTCATGGATGCAAACATA+AGG | + | chr1.3:53908158-53908177 | MS.gene71447:CDS | 35.0% | |
| TTTATGACAACTTCTTCCTG+TGG | - | chr1.3:53910157-53910176 | None:intergenic | 35.0% | |
| ! | ACATTTTGTGGCTTTCTATG+AGG | - | chr1.3:53909074-53909093 | None:intergenic | 35.0% |
| ! | GCAGTAGTTTTCTTACAATC+TGG | - | chr1.3:53908124-53908143 | None:intergenic | 35.0% |
| ! | GTGTATTACTAGTTCTTCGA+AGG | + | chr1.3:53910759-53910778 | MS.gene71447:CDS | 35.0% |
| ! | TCAAATATGGTTGATGTGTG+TGG | + | chr1.3:53907772-53907791 | MS.gene71447:intron | 35.0% |
| ! | TGGGTTTGGGTTAATAAAGA+TGG | + | chr1.3:53912054-53912073 | MS.gene71447:CDS | 35.0% |
| ! | TTTTCGTATGAACGAGATCA+GGG | + | chr1.3:53909737-53909756 | MS.gene71447:intron | 35.0% |
| ! | TTTTGACCTGTATGGTTTAC+CGG | + | chr1.3:53910335-53910354 | MS.gene71447:intron | 35.0% |
| !! | AATATGTCAATGGAGGTGTT+TGG | + | chr1.3:53909258-53909277 | MS.gene71447:intron | 35.0% |
| !! | AGTGTTGGTGTTATAGAATG+TGG | + | chr1.3:53907440-53907459 | MS.gene71447:intron | 35.0% |
| !!! | AGTTTTTGGTAGCAACCTTA+TGG | - | chr1.3:53911656-53911675 | None:intergenic | 35.0% |
| !!! | CAAGTGTTTTGTTTTCACCA+TGG | + | chr1.3:53910876-53910895 | MS.gene71447:intron | 35.0% |
| !!! | GTTTTTGGTAGCAACCTTAT+GGG | - | chr1.3:53911655-53911674 | None:intergenic | 35.0% |
| !!! | TCGATGTGAGGGTTTTTTTT+GGG | + | chr1.3:53907883-53907902 | MS.gene71447:intron | 35.0% |
| !!! | TTCGATGTGAGGGTTTTTTT+TGG | + | chr1.3:53907882-53907901 | MS.gene71447:intron | 35.0% |
| AAGAGAAATCTCTCTTCCGA+GGG | + | chr1.3:53909943-53909962 | MS.gene71447:intron | 40.0% | |
| AATGCCATCATTGTGCTAGA+AGG | + | chr1.3:53911994-53912013 | MS.gene71447:CDS | 40.0% | |
| AATTCAGAGGGAGAATCCAT+TGG | + | chr1.3:53911969-53911988 | MS.gene71447:CDS | 40.0% | |
| AATTGTCTGAGCGGTATTTG+GGG | + | chr1.3:53907233-53907252 | MS.gene71447:CDS | 40.0% | |
| ACAATGATGGCATTCACCAA+TGG | - | chr1.3:53911988-53912007 | None:intergenic | 40.0% | |
| ACAGGTAAATCTTTGAGCTG+GGG | + | chr1.3:53909481-53909500 | MS.gene71447:intron | 40.0% | |
| ACTACTTAAACCGTGGGTAT+TGG | - | chr1.3:53907720-53907739 | None:intergenic | 40.0% | |
| AGATCCTTCTAGCACAATGA+TGG | - | chr1.3:53912001-53912020 | None:intergenic | 40.0% | |
| AGCAGAAGCTACAATTCAGA+GGG | + | chr1.3:53911957-53911976 | MS.gene71447:CDS | 40.0% | |
| AGTTGCTTCAGCAATCTATC+AGG | - | chr1.3:53910410-53910429 | None:intergenic | 40.0% | |
| ATTGCCATATGATGGTTCTC+AGG | + | chr1.3:53909196-53909215 | MS.gene71447:intron | 40.0% | |
| CAGTGCCACCAAAGAAAAAT+TGG | + | chr1.3:53909552-53909571 | MS.gene71447:intron | 40.0% | |
| CTAACTACCAAAACATCCAC+AGG | + | chr1.3:53910138-53910157 | MS.gene71447:intron | 40.0% | |
| CTACTTAAACCGTGGGTATT+GGG | - | chr1.3:53907719-53907738 | None:intergenic | 40.0% | |
| CTCCGTGACTGAATATTCAA+TGG | - | chr1.3:53907992-53908011 | None:intergenic | 40.0% | |
| CTGACTATTCCAAATCAAGC+AGG | - | chr1.3:53909790-53909809 | None:intergenic | 40.0% | |
| GAATTGTCTGAGCGGTATTT+GGG | + | chr1.3:53907232-53907251 | MS.gene71447:CDS | 40.0% | |
| GCCACCAAAGAAAAATTGGT+TGG | + | chr1.3:53909556-53909575 | MS.gene71447:intron | 40.0% | |
| GTCTGATGAATGCAAAGGTA+AGG | + | chr1.3:53911798-53911817 | MS.gene71447:intron | 40.0% | |
| GTGAGAGAATAGCCAATGAA+AGG | + | chr1.3:53910230-53910249 | MS.gene71447:CDS | 40.0% | |
| TAGCAGAAGCTACAATTCAG+AGG | + | chr1.3:53911956-53911975 | MS.gene71447:CDS | 40.0% | |
| TGAATATTCAGTCACGGAGT+TGG | + | chr1.3:53907993-53908012 | MS.gene71447:intron | 40.0% | |
| TGAGACAGAGATATCACAAG+GGG | - | chr1.3:53910946-53910965 | None:intergenic | 40.0% | |
| TGCTTGAAAGGTCTTCTGTT+TGG | + | chr1.3:53907521-53907540 | MS.gene71447:intron | 40.0% | |
| TGGATTGAGATGATGTGGAT+GGG | + | chr1.3:53909399-53909418 | MS.gene71447:intron | 40.0% | |
| TGTATATCACATGCCTTGTC+TGG | + | chr1.3:53908902-53908921 | MS.gene71447:intron | 40.0% | |
| TGTCATGCTTGGGATGATAA+TGG | + | chr1.3:53908305-53908324 | MS.gene71447:intron | 40.0% | |
| TTAATGGTTGCGGTTACGTT+GGG | + | chr1.3:53907747-53907766 | MS.gene71447:intron | 40.0% | |
| TTCAGCAATCTATCAGGAGT+AGG | - | chr1.3:53910404-53910423 | None:intergenic | 40.0% | |
| ! | ACACATGGATTGAGATGATG+TGG | + | chr1.3:53909394-53909413 | MS.gene71447:intron | 40.0% |
| ! | ACTAGTTCTTCGAAGGATGT+TGG | + | chr1.3:53910766-53910785 | MS.gene71447:CDS | 40.0% |
| ! | ACTTCTTCCTGTGGATGTTT+TGG | - | chr1.3:53910148-53910167 | None:intergenic | 40.0% |
| ! | ATGGATTGAGATGATGTGGA+TGG | + | chr1.3:53909398-53909417 | MS.gene71447:intron | 40.0% |
| ! | CAATATTCGTGAAGGGTACA+TGG | + | chr1.3:53907006-53907025 | MS.gene71447:CDS | 40.0% |
| ! | CTTTTCGTATGAACGAGATC+AGG | + | chr1.3:53909736-53909755 | MS.gene71447:intron | 40.0% |
| ! | CTTTTGACCAGCTTAGCATT+AGG | - | chr1.3:53908710-53908729 | None:intergenic | 40.0% |
| ! | GCCAACCAATTTTTCTTTGG+TGG | - | chr1.3:53909560-53909579 | None:intergenic | 40.0% |
| ! | GTTTATGCATTTGCTGATGC+TGG | + | chr1.3:53907274-53907293 | MS.gene71447:CDS | 40.0% |
| ! | TCGGCCAACCAATTTTTCTT+TGG | - | chr1.3:53909563-53909582 | None:intergenic | 40.0% |
| !! | ATTAGAAGCTGAGAAGTGCT+TGG | + | chr1.3:53910201-53910220 | MS.gene71447:CDS | 40.0% |
| !! | CAATTTTTCTTTGGTGGCAC+TGG | - | chr1.3:53909554-53909573 | None:intergenic | 40.0% |
| !! | CCTCTTGAAGAGATTTGTTG+CGG | - | chr1.3:53910666-53910685 | None:intergenic | 40.0% |
| !! | CGCCTTTTGATTAGAAGTGT+TGG | + | chr1.3:53907425-53907444 | MS.gene71447:intron | 40.0% |
| AATTCCACGTACTCTTCCAC+CGG | - | chr1.3:53907217-53907236 | None:intergenic | 45.0% | |
| ACAACCCCTACAATCAAGCA+TGG | + | chr1.3:53911036-53911055 | MS.gene71447:intron | 45.0% | |
| AGAAGACCTTTCAAGCACAC+CGG | - | chr1.3:53907518-53907537 | None:intergenic | 45.0% | |
| AGGTCTACAACTGCAACATC+AGG | - | chr1.3:53907829-53907848 | None:intergenic | 45.0% | |
| AGTACGTGGAATTGTCTGAG+CGG | + | chr1.3:53907224-53907243 | MS.gene71447:CDS | 45.0% | |
| AGTGCTCATAGTGCAACACA+TGG | + | chr1.3:53909379-53909398 | MS.gene71447:intron | 45.0% | |
| AGTGCTTGCGTTAATGGTTG+CGG | + | chr1.3:53907737-53907756 | MS.gene71447:intron | 45.0% | |
| ATCAAACCGGTGTGCTTGAA+AGG | + | chr1.3:53907509-53907528 | MS.gene71447:intron | 45.0% | |
| ATGGCTTTCTACTGTGACAC+AGG | - | chr1.3:53910377-53910396 | None:intergenic | 45.0% | |
| CCGCAACAAATCTCTTCAAG+AGG | + | chr1.3:53910663-53910682 | MS.gene71447:CDS | 45.0% | |
| CCTGCATTTCTGCAGAGATT+GGG | - | chr1.3:53909454-53909473 | None:intergenic | 45.0% | |
| GAAGAGAAATCTCTCTTCCG+AGG | + | chr1.3:53909942-53909961 | MS.gene71447:intron | 45.0% | |
| GAATGACACTGCATTGGAGA+TGG | + | chr1.3:53908083-53908102 | MS.gene71447:CDS | 45.0% | |
| GAGAATAGCCAATGAAAGGG+TGG | + | chr1.3:53910234-53910253 | MS.gene71447:CDS | 45.0% | |
| GCAAATGCATAAACAGACCC+AGG | - | chr1.3:53907268-53907287 | None:intergenic | 45.0% | |
| GCAAGCACTACTTAAACCGT+GGG | - | chr1.3:53907726-53907745 | None:intergenic | 45.0% | |
| GGAATTGTCTGAGCGGTATT+TGG | + | chr1.3:53907231-53907250 | MS.gene71447:CDS | 45.0% | |
| GGTCCTTGTGACTAACAGAA+CGG | + | chr1.3:53909602-53909621 | MS.gene71447:intron | 45.0% | |
| GTCACTCAGGTTCCAACAAT+TGG | + | chr1.3:53912081-53912100 | MS.gene71447:CDS | 45.0% | |
| GTCCTTGTGACTAACAGAAC+GGG | + | chr1.3:53909603-53909622 | MS.gene71447:intron | 45.0% | |
| GTCTTGGAGATGTCATGCTT+GGG | + | chr1.3:53908295-53908314 | MS.gene71447:intron | 45.0% | |
| GTGTCACAGTAGAAAGCCAT+TGG | + | chr1.3:53910377-53910396 | MS.gene71447:intron | 45.0% | |
| GTTAATGGTTGCGGTTACGT+TGG | + | chr1.3:53907746-53907765 | MS.gene71447:intron | 45.0% | |
| GTTACGTTGGGGGTCAAATA+TGG | + | chr1.3:53907759-53907778 | MS.gene71447:intron | 45.0% | |
| TAAGGTCAACGTGTCAGTGT+TGG | - | chr1.3:53907350-53907369 | None:intergenic | 45.0% | |
| TAATGGTTGCGGTTACGTTG+GGG | + | chr1.3:53907748-53907767 | MS.gene71447:intron | 45.0% | |
| TATGGTTTACCGGCATAGCA+TGG | + | chr1.3:53910345-53910364 | MS.gene71447:intron | 45.0% | |
| TCACTTGAACCCAATACCCA+CGG | + | chr1.3:53907707-53907726 | MS.gene71447:intron | 45.0% | |
| TCCACCTGAGAACCATCATA+TGG | - | chr1.3:53909203-53909222 | None:intergenic | 45.0% | |
| TCCTTGTGACTAACAGAACG+GGG | + | chr1.3:53909604-53909623 | MS.gene71447:intron | 45.0% | |
| TCTATCAGGAGTAGGACCAA+TGG | - | chr1.3:53910396-53910415 | None:intergenic | 45.0% | |
| TGGCTTTCTACTGTGACACA+GGG | - | chr1.3:53910376-53910395 | None:intergenic | 45.0% | |
| TGTCTTGGAGATGTCATGCT+TGG | + | chr1.3:53908294-53908313 | MS.gene71447:intron | 45.0% | |
| TGTGAATGTTGCAGTTGTCG+TGG | + | chr1.3:53908044-53908063 | MS.gene71447:intron | 45.0% | |
| TGTTCTCAGCTAAGAGCTCA+TGG | + | chr1.3:53911905-53911924 | MS.gene71447:intron | 45.0% | |
| TTGTCGTGGACGTTTGAGAA+GGG | + | chr1.3:53908058-53908077 | MS.gene71447:CDS | 45.0% | |
| ! | ATGCTGGTGATGCTCATAAG+AGG | + | chr1.3:53907290-53907309 | MS.gene71447:CDS | 45.0% |
| ! | ATTTGGGGTTTCGACAACCT+GGG | + | chr1.3:53907248-53907267 | MS.gene71447:CDS | 45.0% |
| ! | TATTTGGGGTTTCGACAACC+TGG | + | chr1.3:53907247-53907266 | MS.gene71447:CDS | 45.0% |
| ! | TCTACTAAGTGGCTTGTGAG+CGG | + | chr1.3:53908856-53908875 | MS.gene71447:intron | 45.0% |
| ! | TGCTGGTGATGCTCATAAGA+GGG | + | chr1.3:53907291-53907310 | MS.gene71447:CDS | 45.0% |
| !! | CATGTGAGTCTAGTTCTCCT+TGG | - | chr1.3:53910811-53910830 | None:intergenic | 45.0% |
| !! | TATATGAATAATAAATTAAA+TGG | + | chr1.3:53911835-53911854 | MS.gene71447:intron | 5.0% |
| !!! | AAAAAAAATTATGTTTTAAT+TGG | + | chr1.3:53907589-53907608 | MS.gene71447:intron | 5.0% |
| !!! | AAATTTTTATTATAATTTGA+TGG | + | chr1.3:53911864-53911883 | MS.gene71447:intron | 5.0% |
| !!! | ATAAAGTTTATAATATTTTT+TGG | - | chr1.3:53911201-53911220 | None:intergenic | 5.0% |
| !!! | ATAATTTTTTTTTTTTGTTT+TGG | - | chr1.3:53907581-53907600 | None:intergenic | 5.0% |
| !!! | TAAATATTTATATTTTCAAA+AGG | - | chr1.3:53911139-53911158 | None:intergenic | 5.0% |
| AATGGTTGCGGTTACGTTGG+GGG | + | chr1.3:53907749-53907768 | MS.gene71447:intron | 50.0% | |
| ACTTACGCAACGACAGGGTT+TGG | + | chr1.3:53912034-53912053 | MS.gene71447:CDS | 50.0% | |
| AGAAATGCAGGCCTGGAAAC+AGG | + | chr1.3:53909463-53909482 | MS.gene71447:intron | 50.0% | |
| AGGGAGGAATGACACTGCAT+TGG | + | chr1.3:53908077-53908096 | MS.gene71447:CDS | 50.0% | |
| AGGGTGTAACCATGCTATGC+CGG | - | chr1.3:53910357-53910376 | None:intergenic | 50.0% | |
| AGTACCGTTGCAGTTCCAAG+CGG | - | chr1.3:53907072-53907091 | None:intergenic | 50.0% | |
| ATTTCTGCAGAGATTGGGCC+CGG | - | chr1.3:53909449-53909468 | None:intergenic | 50.0% | |
| CAAGTAAGCGTTCTCGTCCA+AGG | + | chr1.3:53910791-53910810 | MS.gene71447:intron | 50.0% | |
| CCCAATCTCTGCAGAAATGC+AGG | + | chr1.3:53909451-53909470 | MS.gene71447:intron | 50.0% | |
| CGCAAGCACTACTTAAACCG+TGG | - | chr1.3:53907727-53907746 | None:intergenic | 50.0% | |
| CTGTCTCTGTGACTGCGATT+GGG | - | chr1.3:53907799-53907818 | None:intergenic | 50.0% | |
| CTTACGCAACGACAGGGTTT+GGG | + | chr1.3:53912035-53912054 | MS.gene71447:CDS | 50.0% | |
| GAGATATCACAAGGGGCTTG+TGG | - | chr1.3:53910939-53910958 | None:intergenic | 50.0% | |
| GCCATATGATGGTTCTCAGG+TGG | + | chr1.3:53909199-53909218 | MS.gene71447:intron | 50.0% | |
| GCCTGCATTTCTGCAGAGAT+TGG | - | chr1.3:53909455-53909474 | None:intergenic | 50.0% | |
| GCTATGCCGGTAAACCATAC+AGG | - | chr1.3:53910344-53910363 | None:intergenic | 50.0% | |
| GTAAATCTTTGAGCTGGGGC+TGG | + | chr1.3:53909485-53909504 | MS.gene71447:intron | 50.0% | |
| GTTGGTTGGAGTGGAAGGAA+AGG | + | chr1.3:53911933-53911952 | MS.gene71447:CDS | 50.0% | |
| GTTGTCGTGGACGTTTGAGA+AGG | + | chr1.3:53908057-53908076 | MS.gene71447:intron | 50.0% | |
| TAAGAGCTCATGGCCAGAGT+TGG | + | chr1.3:53911915-53911934 | MS.gene71447:CDS | 50.0% | |
| TGGTTTCACACCTGGTGTGA+GGG | + | chr1.3:53909505-53909524 | MS.gene71447:intron | 50.0% | |
| TGTCTCTGTGACTGCGATTG+GGG | - | chr1.3:53907798-53907817 | None:intergenic | 50.0% | |
| TTCAACCTCTCCATCACCGA+CGG | + | chr1.3:53907041-53907060 | MS.gene71447:CDS | 50.0% | |
| TTCACCGCTTGGAACTGCAA+CGG | + | chr1.3:53907065-53907084 | MS.gene71447:CDS | 50.0% | |
| ! | AGGTGTTCGTGCAGCCTTTT+TGG | - | chr1.3:53911450-53911469 | None:intergenic | 50.0% |
| ! | CAACGACAGGGTTTGGGTTT+GGG | + | chr1.3:53912041-53912060 | MS.gene71447:CDS | 50.0% |
| ! | CTACTAAGTGGCTTGTGAGC+GGG | + | chr1.3:53908857-53908876 | MS.gene71447:intron | 50.0% |
| ! | GGAGTTGGTCCTTTCACTAC+TGG | + | chr1.3:53908008-53908027 | MS.gene71447:intron | 50.0% |
| !! | TTCTTTGGTGGCACTGGCAA+AGG | - | chr1.3:53909548-53909567 | None:intergenic | 50.0% |
| CCTGTCGTTGCGTAAGTCGT+CGG | - | chr1.3:53912031-53912050 | None:intergenic | 55.0% | |
| CCTTCCACTCCAACCAACTC+TGG | - | chr1.3:53911931-53911950 | None:intergenic | 55.0% | |
| CGACGACTTACGCAACGACA+GGG | + | chr1.3:53912029-53912048 | MS.gene71447:CDS | 55.0% | |
| CTGGTTTCACACCTGGTGTG+AGG | + | chr1.3:53909504-53909523 | MS.gene71447:intron | 55.0% | |
| GCCCCGTTCTGTTAGTCACA+AGG | - | chr1.3:53909608-53909627 | None:intergenic | 55.0% | |
| GCTGTCTCTGTGACTGCGAT+TGG | - | chr1.3:53907800-53907819 | None:intergenic | 55.0% | |
| GTTCCAAGCGGTGAAACCGT+CGG | - | chr1.3:53907060-53907079 | None:intergenic | 55.0% | |
| TCGTGGACGTTTGAGAAGGG+AGG | + | chr1.3:53908061-53908080 | MS.gene71447:CDS | 55.0% | |
| TCTCTGCAGAAATGCAGGCC+TGG | + | chr1.3:53909456-53909475 | MS.gene71447:intron | 55.0% | |
| TGTGAGGGCTGAGACAAGTG+TGG | + | chr1.3:53909520-53909539 | MS.gene71447:intron | 55.0% | |
| TTTCTGCAGAGATTGGGCCC+GGG | - | chr1.3:53909448-53909467 | None:intergenic | 55.0% | |
| ! | AGCTCATGGCCAGAGTTGGT+TGG | + | chr1.3:53911919-53911938 | MS.gene71447:CDS | 55.0% |
| ! | ATGGCCAGAGTTGGTTGGAG+TGG | + | chr1.3:53911924-53911943 | MS.gene71447:CDS | 55.0% |
| ! | CCAGAGTTGGTTGGAGTGGA+AGG | + | chr1.3:53911928-53911947 | MS.gene71447:CDS | 55.0% |
| ! | GCAACGACAGGGTTTGGGTT+TGG | + | chr1.3:53912040-53912059 | MS.gene71447:CDS | 55.0% |
| ! | TAAGTGGCTTGTGAGCGGGT+AGG | + | chr1.3:53908861-53908880 | MS.gene71447:intron | 55.0% |
| !! | TGAAACCGTCGGTGATGGAG+AGG | - | chr1.3:53907049-53907068 | None:intergenic | 55.0% |
| AGCGGTGAAACCGTCGGTGA+TGG | - | chr1.3:53907054-53907073 | None:intergenic | 60.0% | |
| CCGACGACTTACGCAACGAC+AGG | + | chr1.3:53912028-53912047 | MS.gene71447:CDS | 60.0% | |
| CTTGTCTCAGCCCTCACACC+AGG | - | chr1.3:53909518-53909537 | None:intergenic | 60.0% | |
| GACTTTCCTGAGCCCAGCAC+GGG | - | chr1.3:53909425-53909444 | None:intergenic | 60.0% | |
| GGACTTTCCTGAGCCCAGCA+CGG | - | chr1.3:53909426-53909445 | None:intergenic | 60.0% | |
| TCACCGACGGTTTCACCGCT+TGG | + | chr1.3:53907054-53907073 | MS.gene71447:CDS | 60.0% | |
| TTCTGCAGAGATTGGGCCCG+GGG | - | chr1.3:53909447-53909466 | None:intergenic | 60.0% | |
| ! | GAAGCAGCGTGCTGCTCAGT+GGG | + | chr1.3:53907186-53907205 | MS.gene71447:CDS | 60.0% |
| ! | TGAAGCAGCGTGCTGCTCAG+TGG | + | chr1.3:53907185-53907204 | MS.gene71447:CDS | 60.0% |
| CCACGTACTCTTCCACCGGC+TGG | - | chr1.3:53907213-53907232 | None:intergenic | 65.0% | |
| CTGGGCTCAGGAAAGTCCCC+GGG | + | chr1.3:53909428-53909447 | MS.gene71447:intron | 65.0% | |
| GATGTGGATGGGCCCGTGCT+GGG | + | chr1.3:53909410-53909429 | MS.gene71447:intron | 65.0% | |
| GCTGGGCTCAGGAAAGTCCC+CGG | + | chr1.3:53909427-53909446 | MS.gene71447:intron | 65.0% | |
| TGATGTGGATGGGCCCGTGC+TGG | + | chr1.3:53909409-53909428 | MS.gene71447:intron | 65.0% | |
| TGCTGCTCAGTGGGACCAGC+CGG | + | chr1.3:53907195-53907214 | MS.gene71447:CDS | 65.0% | |
| ! | CCAGCCGGTGGAAGAGTACG+TGG | + | chr1.3:53907210-53907229 | MS.gene71447:CDS | 65.0% |
| !! | GCTGGGGCTGGTTTCACACC+TGG | + | chr1.3:53909497-53909516 | MS.gene71447:intron | 65.0% |
| TGCTCAGTGGGACCAGCCGG+TGG | + | chr1.3:53907198-53907217 | MS.gene71447:CDS | 70.0% | |
| GATGGGCCCGTGCTGGGCTC+AGG | + | chr1.3:53909416-53909435 | MS.gene71447:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 53906951 | 53912107 | 53906951 | ID=MS.gene71447 |
| chr1.3 | mRNA | 53906951 | 53912107 | 53906951 | ID=MS.gene71447.t1;Parent=MS.gene71447 |
| chr1.3 | exon | 53906951 | 53907086 | 53906951 | ID=MS.gene71447.t1.exon1;Parent=MS.gene71447.t1 |
| chr1.3 | CDS | 53906951 | 53907086 | 53906951 | ID=cds.MS.gene71447.t1;Parent=MS.gene71447.t1 |
| chr1.3 | exon | 53907170 | 53907312 | 53907170 | ID=MS.gene71447.t1.exon2;Parent=MS.gene71447.t1 |
| chr1.3 | CDS | 53907170 | 53907312 | 53907170 | ID=cds.MS.gene71447.t1;Parent=MS.gene71447.t1 |
| chr1.3 | exon | 53908058 | 53908186 | 53908058 | ID=MS.gene71447.t1.exon3;Parent=MS.gene71447.t1 |
| chr1.3 | CDS | 53908058 | 53908186 | 53908058 | ID=cds.MS.gene71447.t1;Parent=MS.gene71447.t1 |
| chr1.3 | exon | 53910160 | 53910282 | 53910160 | ID=MS.gene71447.t1.exon4;Parent=MS.gene71447.t1 |
| chr1.3 | CDS | 53910160 | 53910282 | 53910160 | ID=cds.MS.gene71447.t1;Parent=MS.gene71447.t1 |
| chr1.3 | exon | 53910592 | 53910793 | 53910592 | ID=MS.gene71447.t1.exon5;Parent=MS.gene71447.t1 |
| chr1.3 | CDS | 53910592 | 53910793 | 53910592 | ID=cds.MS.gene71447.t1;Parent=MS.gene71447.t1 |
| chr1.3 | exon | 53911914 | 53912107 | 53911914 | ID=MS.gene71447.t1.exon6;Parent=MS.gene71447.t1 |
| chr1.3 | CDS | 53911914 | 53912107 | 53911914 | ID=cds.MS.gene71447.t1;Parent=MS.gene71447.t1 |
| Gene Sequence |
| Protein sequence |
