Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71575.t1 | XP_013469936.1 | 94.4 | 252 | 14 | 0 | 1 | 252 | 1 | 252 | 1.60E-139 | 505.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71575.t1 | Q8S9L6 | 38.1 | 218 | 128 | 4 | 37 | 251 | 38 | 251 | 2.9e-33 | 143.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71575.t1 | G8A0Z3 | 94.4 | 252 | 14 | 0 | 1 | 252 | 1 | 252 | 1.1e-139 | 505.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050163 | MS.gene71575 | -0.801515 | 8.68E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene71575 | -0.823487 | 1.35E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene71575 | -0.814707 | 1.34E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene71575 | -0.801716 | 7.90E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71575.t1 | MTR_1g105885 | 94.444 | 252 | 14 | 0 | 1 | 252 | 1 | 252 | 0.0 | 499 |
| MS.gene71575.t1 | MTR_1g105860 | 71.875 | 256 | 66 | 4 | 1 | 251 | 18 | 272 | 4.05e-134 | 379 |
| MS.gene71575.t1 | MTR_1g105860 | 71.875 | 256 | 66 | 4 | 1 | 251 | 1 | 255 | 6.65e-134 | 378 |
| MS.gene71575.t1 | MTR_1g105855 | 67.547 | 265 | 70 | 6 | 1 | 251 | 18 | 280 | 4.38e-125 | 357 |
| MS.gene71575.t1 | MTR_1g021638 | 55.510 | 245 | 102 | 3 | 12 | 250 | 8 | 251 | 5.62e-91 | 271 |
| MS.gene71575.t1 | MTR_0341s0010 | 54.183 | 251 | 103 | 6 | 12 | 251 | 8 | 257 | 2.19e-89 | 267 |
| MS.gene71575.t1 | MTR_1g021632 | 55.242 | 248 | 104 | 4 | 10 | 251 | 7 | 253 | 7.28e-88 | 274 |
| MS.gene71575.t1 | MTR_1g021630 | 54.183 | 251 | 103 | 6 | 12 | 251 | 8 | 257 | 8.90e-86 | 268 |
| MS.gene71575.t1 | MTR_1g105850 | 55.844 | 231 | 100 | 2 | 23 | 252 | 30 | 259 | 1.99e-85 | 257 |
| MS.gene71575.t1 | MTR_1g021635 | 53.441 | 247 | 107 | 4 | 12 | 251 | 8 | 253 | 3.11e-83 | 262 |
| MS.gene71575.t1 | MTR_1g021610 | 52.846 | 246 | 107 | 4 | 13 | 251 | 10 | 253 | 9.59e-80 | 253 |
| MS.gene71575.t1 | MTR_1g105820 | 50.000 | 256 | 116 | 6 | 1 | 250 | 1 | 250 | 5.21e-77 | 246 |
| MS.gene71575.t1 | MTR_1g021642 | 51.172 | 256 | 113 | 5 | 1 | 246 | 8 | 261 | 7.99e-75 | 240 |
| MS.gene71575.t1 | MTR_1g105755 | 47.638 | 254 | 122 | 6 | 1 | 250 | 1 | 247 | 4.86e-71 | 228 |
| MS.gene71575.t1 | MTR_5g068260 | 48.361 | 244 | 118 | 4 | 10 | 251 | 8 | 245 | 2.03e-70 | 228 |
| MS.gene71575.t1 | MTR_1g105750 | 49.796 | 245 | 116 | 4 | 7 | 249 | 11 | 250 | 2.05e-66 | 217 |
| MS.gene71575.t1 | MTR_5g068250 | 47.807 | 228 | 113 | 3 | 24 | 251 | 29 | 250 | 6.73e-65 | 211 |
| MS.gene71575.t1 | MTR_0341s0020 | 44.578 | 249 | 99 | 6 | 12 | 251 | 8 | 226 | 6.71e-61 | 203 |
| MS.gene71575.t1 | MTR_1g105800 | 47.679 | 237 | 116 | 4 | 15 | 250 | 19 | 248 | 1.37e-60 | 202 |
| MS.gene71575.t1 | MTR_5g068190 | 43.320 | 247 | 127 | 5 | 10 | 250 | 8 | 247 | 4.83e-58 | 195 |
| MS.gene71575.t1 | MTR_1g105840 | 42.975 | 242 | 128 | 4 | 11 | 252 | 9 | 240 | 1.77e-55 | 189 |
| MS.gene71575.t1 | MTR_5g065130 | 41.975 | 243 | 127 | 5 | 14 | 252 | 10 | 242 | 8.49e-53 | 181 |
| MS.gene71575.t1 | MTR_1g105700 | 38.589 | 241 | 133 | 6 | 21 | 252 | 19 | 253 | 6.20e-47 | 166 |
| MS.gene71575.t1 | MTR_1g105710 | 40.090 | 222 | 119 | 6 | 39 | 252 | 33 | 248 | 1.64e-45 | 161 |
| MS.gene71575.t1 | MTR_1g105830 | 36.364 | 242 | 127 | 5 | 14 | 252 | 35 | 252 | 5.78e-43 | 147 |
| MS.gene71575.t1 | MTR_7g052020 | 31.405 | 242 | 157 | 4 | 9 | 250 | 5 | 237 | 1.18e-39 | 138 |
| MS.gene71575.t1 | MTR_1g105640 | 34.553 | 246 | 149 | 7 | 11 | 251 | 15 | 253 | 8.26e-35 | 131 |
| MS.gene71575.t1 | MTR_1g105640 | 34.553 | 246 | 149 | 7 | 11 | 251 | 15 | 253 | 8.48e-35 | 131 |
| MS.gene71575.t1 | MTR_1g105640 | 34.553 | 246 | 149 | 7 | 11 | 251 | 15 | 253 | 8.56e-35 | 131 |
| MS.gene71575.t1 | MTR_1g104890 | 31.925 | 213 | 139 | 3 | 41 | 251 | 51 | 259 | 1.96e-33 | 123 |
| MS.gene71575.t1 | MTR_5g068290 | 49.600 | 125 | 61 | 2 | 127 | 251 | 1 | 123 | 3.94e-33 | 123 |
| MS.gene71575.t1 | MTR_6g463660 | 33.462 | 260 | 157 | 6 | 1 | 252 | 1 | 252 | 4.99e-33 | 125 |
| MS.gene71575.t1 | MTR_6g463660 | 31.863 | 204 | 127 | 6 | 50 | 250 | 296 | 490 | 2.66e-22 | 95.5 |
| MS.gene71575.t1 | MTR_6g057680 | 33.462 | 260 | 157 | 6 | 1 | 252 | 1 | 252 | 4.99e-33 | 125 |
| MS.gene71575.t1 | MTR_6g057680 | 31.863 | 204 | 127 | 6 | 50 | 250 | 296 | 490 | 2.66e-22 | 95.5 |
| MS.gene71575.t1 | MTR_1g104890 | 31.925 | 213 | 139 | 3 | 41 | 251 | 51 | 259 | 1.81e-32 | 123 |
| MS.gene71575.t1 | MTR_2g088980 | 31.727 | 249 | 155 | 7 | 4 | 249 | 7 | 243 | 2.90e-32 | 118 |
| MS.gene71575.t1 | MTR_1g104890 | 31.925 | 213 | 139 | 3 | 41 | 251 | 51 | 259 | 7.57e-32 | 122 |
| MS.gene71575.t1 | MTR_1g104890 | 31.925 | 213 | 139 | 3 | 41 | 251 | 51 | 259 | 1.12e-31 | 122 |
| MS.gene71575.t1 | MTR_5g005480 | 33.054 | 239 | 151 | 6 | 16 | 250 | 16 | 249 | 1.47e-31 | 122 |
| MS.gene71575.t1 | MTR_6g463400 | 30.620 | 258 | 166 | 5 | 1 | 252 | 1 | 251 | 6.57e-30 | 117 |
| MS.gene71575.t1 | MTR_6g463400 | 32.489 | 237 | 139 | 8 | 20 | 251 | 271 | 491 | 2.01e-26 | 107 |
| MS.gene71575.t1 | MTR_5g005450 | 29.845 | 258 | 160 | 8 | 1 | 250 | 1 | 245 | 1.66e-29 | 116 |
| MS.gene71575.t1 | MTR_1g105650 | 32.381 | 210 | 136 | 3 | 45 | 251 | 48 | 254 | 1.81e-28 | 114 |
| MS.gene71575.t1 | MTR_5g005530 | 35.514 | 214 | 132 | 3 | 38 | 250 | 39 | 247 | 2.28e-28 | 113 |
| MS.gene71575.t1 | MTR_6g055960 | 29.183 | 257 | 165 | 7 | 1 | 252 | 1 | 245 | 2.43e-28 | 113 |
| MS.gene71575.t1 | MTR_6g055960 | 30.973 | 226 | 137 | 7 | 28 | 250 | 274 | 483 | 3.79e-22 | 95.5 |
| MS.gene71575.t1 | MTR_6g463830 | 31.873 | 251 | 155 | 8 | 11 | 252 | 9 | 252 | 3.20e-28 | 113 |
| MS.gene71575.t1 | MTR_6g463830 | 31.111 | 225 | 137 | 8 | 28 | 250 | 281 | 489 | 2.96e-18 | 84.3 |
| MS.gene71575.t1 | MTR_2g088930 | 29.921 | 254 | 161 | 7 | 1 | 251 | 6 | 245 | 2.00e-27 | 105 |
| MS.gene71575.t1 | MTR_1g105585 | 32.569 | 218 | 129 | 6 | 43 | 252 | 48 | 255 | 2.80e-27 | 110 |
| MS.gene71575.t1 | MTR_3g011890 | 29.412 | 238 | 152 | 6 | 18 | 251 | 20 | 245 | 6.41e-27 | 105 |
| MS.gene71575.t1 | MTR_0007s0020 | 29.885 | 261 | 166 | 6 | 1 | 252 | 1 | 253 | 1.80e-26 | 108 |
| MS.gene71575.t1 | MTR_0007s0020 | 34.463 | 177 | 107 | 5 | 77 | 250 | 322 | 492 | 7.18e-20 | 89.0 |
| MS.gene71575.t1 | MTR_8g028065 | 32.530 | 249 | 146 | 9 | 9 | 250 | 9 | 242 | 4.34e-26 | 107 |
| MS.gene71575.t1 | MTR_8g028065 | 28.634 | 227 | 141 | 8 | 32 | 251 | 276 | 488 | 3.70e-17 | 80.9 |
| MS.gene71575.t1 | MTR_1g105595 | 31.429 | 210 | 134 | 6 | 47 | 252 | 52 | 255 | 1.32e-25 | 105 |
| MS.gene71575.t1 | MTR_1g105595 | 31.429 | 210 | 134 | 6 | 47 | 252 | 52 | 255 | 1.33e-25 | 105 |
| MS.gene71575.t1 | MTR_6g057750 | 28.571 | 245 | 166 | 5 | 9 | 250 | 14 | 252 | 5.41e-25 | 103 |
| MS.gene71575.t1 | MTR_6g057750 | 26.693 | 251 | 157 | 8 | 14 | 251 | 266 | 502 | 2.27e-18 | 84.7 |
| MS.gene71575.t1 | MTR_6g463700 | 30.364 | 247 | 161 | 6 | 9 | 250 | 12 | 252 | 5.50e-25 | 103 |
| MS.gene71575.t1 | MTR_1g105655 | 31.651 | 218 | 138 | 6 | 37 | 250 | 43 | 253 | 1.35e-23 | 99.8 |
| MS.gene71575.t1 | MTR_3g011910 | 30.894 | 246 | 153 | 8 | 11 | 250 | 24 | 258 | 1.80e-23 | 99.0 |
| MS.gene71575.t1 | MTR_6g057770 | 30.544 | 239 | 156 | 5 | 20 | 252 | 19 | 253 | 1.95e-23 | 99.4 |
| MS.gene71575.t1 | MTR_6g057770 | 32.353 | 238 | 143 | 8 | 19 | 250 | 266 | 491 | 3.90e-20 | 89.7 |
| MS.gene71575.t1 | MTR_6g463710 | 30.544 | 239 | 156 | 5 | 20 | 252 | 19 | 253 | 1.97e-23 | 99.4 |
| MS.gene71575.t1 | MTR_6g463710 | 32.353 | 238 | 143 | 8 | 19 | 250 | 266 | 491 | 3.83e-20 | 89.7 |
| MS.gene71575.t1 | MTR_3g011910 | 32.569 | 218 | 135 | 6 | 37 | 250 | 23 | 232 | 2.44e-23 | 99.0 |
| MS.gene71575.t1 | MTR_8g041650 | 28.226 | 248 | 167 | 6 | 7 | 251 | 10 | 249 | 1.34e-22 | 96.7 |
| MS.gene71575.t1 | MTR_1g105725 | 27.059 | 255 | 167 | 8 | 9 | 252 | 23 | 269 | 2.61e-22 | 95.9 |
| MS.gene71575.t1 | MTR_5g005520 | 30.093 | 216 | 140 | 6 | 41 | 250 | 36 | 246 | 3.53e-22 | 95.5 |
| MS.gene71575.t1 | MTR_5g005520 | 30.093 | 216 | 140 | 6 | 41 | 250 | 41 | 251 | 5.75e-22 | 95.1 |
| MS.gene71575.t1 | MTR_6g053000 | 31.765 | 255 | 157 | 10 | 1 | 250 | 1 | 243 | 7.20e-22 | 94.7 |
| MS.gene71575.t1 | MTR_1g105615 | 29.008 | 262 | 165 | 9 | 2 | 252 | 3 | 254 | 1.24e-21 | 93.6 |
| MS.gene71575.t1 | MTR_8g041710 | 27.049 | 244 | 162 | 7 | 11 | 251 | 13 | 243 | 2.31e-20 | 90.1 |
| MS.gene71575.t1 | MTR_2g010730 | 24.800 | 250 | 172 | 4 | 9 | 250 | 5 | 246 | 1.15e-18 | 83.2 |
| MS.gene71575.t1 | MTR_1g105600 | 32.227 | 211 | 128 | 7 | 47 | 250 | 307 | 509 | 2.82e-18 | 84.3 |
| MS.gene71575.t1 | MTR_1g105600 | 29.353 | 201 | 128 | 7 | 61 | 251 | 69 | 265 | 4.27e-13 | 68.9 |
| MS.gene71575.t1 | MTR_8g041880 | 25.703 | 249 | 169 | 8 | 10 | 251 | 9 | 248 | 2.64e-17 | 81.3 |
| MS.gene71575.t1 | MTR_0074s0060 | 26.996 | 263 | 147 | 7 | 1 | 250 | 1 | 231 | 4.22e-17 | 80.9 |
| MS.gene71575.t1 | MTR_1g105715 | 55.172 | 58 | 26 | 0 | 61 | 118 | 4 | 61 | 7.99e-17 | 73.6 |
| MS.gene71575.t1 | MTR_3g079850 | 30.288 | 208 | 117 | 8 | 64 | 251 | 63 | 262 | 2.33e-16 | 78.6 |
| MS.gene71575.t1 | MTR_3g079850 | 30.288 | 208 | 117 | 8 | 64 | 251 | 63 | 262 | 2.95e-16 | 78.2 |
| MS.gene71575.t1 | MTR_8g041690 | 30.539 | 167 | 109 | 4 | 86 | 252 | 88 | 247 | 8.89e-16 | 77.0 |
| MS.gene71575.t1 | MTR_8g041910 | 23.922 | 255 | 167 | 10 | 10 | 250 | 14 | 255 | 1.84e-15 | 75.9 |
| MS.gene71575.t1 | MTR_2g010710 | 26.486 | 185 | 126 | 4 | 67 | 250 | 66 | 241 | 3.12e-15 | 73.6 |
| MS.gene71575.t1 | MTR_0264s0030 | 33.526 | 173 | 106 | 6 | 83 | 250 | 76 | 244 | 1.62e-14 | 72.4 |
| MS.gene71575.t1 | MTR_8g041870 | 25.532 | 188 | 113 | 6 | 66 | 250 | 84 | 247 | 4.07e-14 | 71.6 |
| MS.gene71575.t1 | MTR_3g415620 | 38.182 | 110 | 63 | 3 | 28 | 136 | 106 | 211 | 3.76e-13 | 67.0 |
| MS.gene71575.t1 | MTR_8g041660 | 23.113 | 212 | 150 | 6 | 45 | 251 | 44 | 247 | 4.27e-13 | 68.9 |
| MS.gene71575.t1 | MTR_8g041660 | 23.113 | 212 | 150 | 6 | 45 | 251 | 44 | 247 | 5.35e-13 | 68.6 |
| MS.gene71575.t1 | MTR_1g105720 | 49.091 | 55 | 28 | 0 | 61 | 115 | 9 | 63 | 3.88e-12 | 60.8 |
| MS.gene71575.t1 | MTR_2g010720 | 24.339 | 189 | 131 | 4 | 65 | 252 | 129 | 306 | 2.06e-11 | 63.2 |
| MS.gene71575.t1 | MTR_8g104990 | 23.223 | 211 | 143 | 5 | 38 | 244 | 32 | 227 | 2.23e-11 | 62.8 |
| MS.gene71575.t1 | MTR_8g041890 | 24.400 | 250 | 171 | 7 | 10 | 251 | 9 | 248 | 2.25e-11 | 63.9 |
| MS.gene71575.t1 | MTR_6g057440 | 30.822 | 146 | 87 | 6 | 11 | 149 | 9 | 147 | 7.80e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71575.t1 | AT4G21410 | 38.073 | 218 | 128 | 4 | 37 | 251 | 38 | 251 | 2.85e-38 | 140 |
| MS.gene71575.t1 | AT4G21410 | 38.073 | 218 | 128 | 4 | 37 | 251 | 38 | 251 | 7.34e-38 | 140 |
| MS.gene71575.t1 | AT3G22060 | 33.473 | 239 | 152 | 4 | 15 | 252 | 19 | 251 | 1.32e-37 | 132 |
| MS.gene71575.t1 | AT4G38830 | 35.780 | 218 | 134 | 4 | 35 | 250 | 32 | 245 | 4.12e-35 | 132 |
| MS.gene71575.t1 | AT4G05200 | 35.060 | 251 | 148 | 8 | 5 | 250 | 8 | 248 | 3.14e-34 | 130 |
| MS.gene71575.t1 | AT4G05200 | 35.060 | 251 | 148 | 8 | 5 | 250 | 26 | 266 | 3.27e-34 | 130 |
| MS.gene71575.t1 | AT4G21400 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 1.36e-33 | 127 |
| MS.gene71575.t1 | AT4G21400 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 1.61e-33 | 127 |
| MS.gene71575.t1 | AT4G21400 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 1.61e-33 | 127 |
| MS.gene71575.t1 | AT4G21400 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 1.61e-33 | 127 |
| MS.gene71575.t1 | AT4G21400 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 3.06e-33 | 127 |
| MS.gene71575.t1 | AT4G21400 | 33.953 | 215 | 137 | 3 | 39 | 251 | 42 | 253 | 3.26e-33 | 127 |
| MS.gene71575.t1 | AT4G23220 | 32.093 | 215 | 145 | 1 | 39 | 252 | 29 | 243 | 3.69e-33 | 127 |
| MS.gene71575.t1 | AT4G23160 | 36.441 | 236 | 134 | 8 | 21 | 250 | 37 | 262 | 8.09e-33 | 126 |
| MS.gene71575.t1 | AT4G23160 | 36.441 | 236 | 134 | 8 | 21 | 250 | 617 | 842 | 1.21e-32 | 126 |
| MS.gene71575.t1 | AT4G23160 | 36.441 | 236 | 134 | 8 | 21 | 250 | 617 | 842 | 1.21e-32 | 126 |
| MS.gene71575.t1 | AT4G23170 | 35.443 | 237 | 135 | 9 | 21 | 250 | 20 | 245 | 2.66e-32 | 119 |
| MS.gene71575.t1 | AT4G23180 | 35.897 | 234 | 135 | 8 | 21 | 250 | 31 | 253 | 2.82e-32 | 123 |
| MS.gene71575.t1 | AT4G23180 | 35.897 | 234 | 135 | 8 | 21 | 250 | 31 | 253 | 5.08e-32 | 123 |
| MS.gene71575.t1 | AT4G23180 | 35.897 | 234 | 135 | 8 | 21 | 250 | 31 | 253 | 8.79e-32 | 123 |
| MS.gene71575.t1 | AT4G23280 | 36.620 | 213 | 123 | 5 | 41 | 250 | 39 | 242 | 1.18e-31 | 122 |
| MS.gene71575.t1 | AT4G23280 | 36.620 | 213 | 123 | 5 | 41 | 250 | 39 | 242 | 1.23e-31 | 122 |
| MS.gene71575.t1 | AT4G23280 | 36.620 | 213 | 123 | 5 | 41 | 250 | 39 | 242 | 1.43e-31 | 122 |
| MS.gene71575.t1 | AT4G21230 | 36.073 | 219 | 121 | 7 | 37 | 250 | 37 | 241 | 3.39e-31 | 121 |
| MS.gene71575.t1 | AT4G23200 | 30.841 | 214 | 143 | 2 | 41 | 249 | 30 | 243 | 3.28e-30 | 117 |
| MS.gene71575.t1 | AT4G23200 | 30.841 | 214 | 143 | 2 | 41 | 249 | 30 | 243 | 6.91e-30 | 117 |
| MS.gene71575.t1 | AT4G23150 | 35.981 | 214 | 126 | 7 | 41 | 250 | 39 | 245 | 1.35e-29 | 117 |
| MS.gene71575.t1 | AT4G21400 | 36.471 | 170 | 104 | 2 | 83 | 251 | 61 | 227 | 2.19e-29 | 116 |
| MS.gene71575.t1 | AT4G00970 | 37.838 | 185 | 105 | 5 | 66 | 246 | 79 | 257 | 4.19e-29 | 115 |
| MS.gene71575.t1 | AT4G00970 | 37.838 | 185 | 105 | 5 | 66 | 246 | 79 | 257 | 6.94e-29 | 115 |
| MS.gene71575.t1 | AT4G23130 | 34.762 | 210 | 126 | 6 | 45 | 251 | 44 | 245 | 2.44e-27 | 110 |
| MS.gene71575.t1 | AT4G23130 | 34.762 | 210 | 126 | 6 | 45 | 251 | 44 | 245 | 2.84e-27 | 110 |
| MS.gene71575.t1 | AT4G23130 | 34.762 | 210 | 126 | 6 | 45 | 251 | 44 | 245 | 3.00e-27 | 110 |
| MS.gene71575.t1 | AT4G23140 | 34.259 | 216 | 127 | 7 | 41 | 250 | 40 | 246 | 8.28e-27 | 108 |
| MS.gene71575.t1 | AT4G23250 | 29.487 | 234 | 143 | 5 | 32 | 250 | 30 | 256 | 8.87e-27 | 108 |
| MS.gene71575.t1 | AT4G23250 | 26.471 | 204 | 125 | 4 | 47 | 250 | 741 | 919 | 4.10e-15 | 75.1 |
| MS.gene71575.t1 | AT4G23250 | 29.487 | 234 | 143 | 5 | 32 | 250 | 30 | 256 | 8.87e-27 | 108 |
| MS.gene71575.t1 | AT4G23140 | 34.259 | 216 | 127 | 7 | 41 | 250 | 40 | 246 | 9.14e-27 | 108 |
| MS.gene71575.t1 | AT4G23250 | 29.487 | 234 | 143 | 5 | 32 | 250 | 30 | 256 | 9.25e-27 | 108 |
| MS.gene71575.t1 | AT4G23230 | 34.579 | 214 | 127 | 7 | 41 | 250 | 37 | 241 | 5.19e-26 | 106 |
| MS.gene71575.t1 | AT3G45860 | 35.185 | 216 | 123 | 6 | 41 | 250 | 43 | 247 | 1.09e-25 | 105 |
| MS.gene71575.t1 | AT4G11460 | 29.545 | 220 | 145 | 4 | 39 | 249 | 32 | 250 | 3.73e-25 | 104 |
| MS.gene71575.t1 | AT4G11460 | 29.545 | 220 | 145 | 4 | 39 | 249 | 32 | 250 | 4.23e-25 | 103 |
| MS.gene71575.t1 | AT4G11530 | 27.727 | 220 | 147 | 3 | 39 | 249 | 30 | 246 | 4.80e-25 | 103 |
| MS.gene71575.t1 | AT5G48540 | 28.689 | 244 | 159 | 6 | 11 | 250 | 9 | 241 | 8.75e-25 | 99.4 |
| MS.gene71575.t1 | AT4G23270 | 31.837 | 245 | 153 | 7 | 10 | 250 | 6 | 240 | 1.11e-24 | 102 |
| MS.gene71575.t1 | AT4G23270 | 31.837 | 245 | 153 | 7 | 10 | 250 | 6 | 240 | 1.11e-24 | 102 |
| MS.gene71575.t1 | AT4G23270 | 30.864 | 243 | 155 | 6 | 12 | 250 | 7 | 240 | 1.34e-24 | 102 |
| MS.gene71575.t1 | AT4G23310 | 34.450 | 209 | 125 | 6 | 45 | 250 | 156 | 355 | 1.81e-24 | 102 |
| MS.gene71575.t1 | AT4G23310 | 34.286 | 210 | 124 | 7 | 45 | 250 | 156 | 355 | 2.00e-24 | 102 |
| MS.gene71575.t1 | AT4G20640 | 30.588 | 255 | 163 | 7 | 5 | 251 | 7 | 255 | 2.19e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20580 | 30.588 | 255 | 163 | 7 | 5 | 251 | 7 | 255 | 2.19e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20610 | 30.588 | 255 | 163 | 7 | 5 | 251 | 7 | 255 | 2.19e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20630 | 30.588 | 255 | 163 | 7 | 5 | 251 | 7 | 255 | 2.19e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20620 | 30.588 | 255 | 163 | 7 | 5 | 251 | 7 | 255 | 2.19e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20590 | 30.588 | 255 | 163 | 7 | 5 | 251 | 7 | 255 | 2.19e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20600 | 30.588 | 255 | 163 | 7 | 5 | 251 | 7 | 255 | 2.19e-24 | 98.2 |
| MS.gene71575.t1 | AT4G23210 | 28.685 | 251 | 157 | 6 | 12 | 249 | 9 | 250 | 2.37e-24 | 102 |
| MS.gene71575.t1 | AT4G20570 | 30.588 | 255 | 163 | 7 | 5 | 251 | 21 | 269 | 2.73e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20560 | 30.588 | 255 | 163 | 7 | 5 | 251 | 21 | 269 | 2.73e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20645 | 30.588 | 255 | 163 | 7 | 5 | 251 | 21 | 269 | 2.73e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20550 | 30.588 | 255 | 163 | 7 | 5 | 251 | 21 | 269 | 2.73e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20530 | 30.588 | 255 | 163 | 7 | 5 | 251 | 21 | 269 | 2.73e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20540 | 30.588 | 255 | 163 | 7 | 5 | 251 | 21 | 269 | 2.73e-24 | 98.2 |
| MS.gene71575.t1 | AT4G20670 | 30.588 | 255 | 163 | 7 | 5 | 251 | 7 | 255 | 2.97e-24 | 98.2 |
| MS.gene71575.t1 | AT4G23210 | 28.685 | 251 | 157 | 6 | 12 | 249 | 9 | 250 | 3.08e-24 | 101 |
| MS.gene71575.t1 | AT4G23210 | 28.685 | 251 | 157 | 6 | 12 | 249 | 9 | 250 | 3.46e-24 | 101 |
| MS.gene71575.t1 | AT4G23210 | 28.685 | 251 | 157 | 6 | 12 | 249 | 9 | 250 | 3.47e-24 | 101 |
| MS.gene71575.t1 | AT4G23210 | 28.685 | 251 | 157 | 6 | 12 | 249 | 9 | 250 | 3.47e-24 | 101 |
| MS.gene71575.t1 | AT3G58310 | 28.807 | 243 | 159 | 6 | 15 | 252 | 23 | 256 | 4.37e-24 | 97.4 |
| MS.gene71575.t1 | AT4G23240 | 30.918 | 207 | 138 | 3 | 47 | 250 | 41 | 245 | 5.74e-24 | 100 |
| MS.gene71575.t1 | AT4G23300 | 28.319 | 226 | 144 | 4 | 37 | 249 | 30 | 250 | 9.78e-24 | 100 |
| MS.gene71575.t1 | AT3G21990 | 30.204 | 245 | 158 | 6 | 13 | 251 | 18 | 255 | 1.86e-23 | 95.9 |
| MS.gene71575.t1 | AT4G23190 | 28.507 | 221 | 148 | 4 | 37 | 249 | 30 | 248 | 6.42e-23 | 97.8 |
| MS.gene71575.t1 | AT4G23190 | 28.507 | 221 | 148 | 4 | 37 | 249 | 30 | 248 | 6.81e-23 | 97.4 |
| MS.gene71575.t1 | AT4G11521 | 27.193 | 228 | 158 | 3 | 27 | 249 | 17 | 241 | 1.09e-22 | 94.0 |
| MS.gene71575.t1 | AT2G31620 | 28.899 | 218 | 146 | 4 | 36 | 249 | 40 | 252 | 1.27e-22 | 93.6 |
| MS.gene71575.t1 | AT4G04500 | 28.436 | 211 | 136 | 5 | 55 | 252 | 47 | 255 | 3.18e-21 | 92.4 |
| MS.gene71575.t1 | AT4G04500 | 28.436 | 211 | 136 | 5 | 55 | 252 | 47 | 255 | 3.18e-21 | 92.4 |
| MS.gene71575.t1 | AT4G04500 | 28.436 | 211 | 136 | 5 | 55 | 252 | 47 | 255 | 3.44e-21 | 92.8 |
| MS.gene71575.t1 | AT1G61750 | 29.224 | 219 | 148 | 4 | 29 | 245 | 28 | 241 | 8.23e-21 | 90.1 |
| MS.gene71575.t1 | AT3G21960 | 30.180 | 222 | 143 | 5 | 36 | 251 | 46 | 261 | 9.29e-21 | 88.6 |
| MS.gene71575.t1 | AT4G11490 | 26.606 | 218 | 150 | 2 | 10 | 222 | 8 | 220 | 1.45e-20 | 90.9 |
| MS.gene71575.t1 | AT4G21410 | 41.732 | 127 | 71 | 2 | 127 | 251 | 1 | 126 | 5.17e-20 | 89.4 |
| MS.gene71575.t1 | AT4G21400 | 38.095 | 126 | 77 | 1 | 127 | 251 | 1 | 126 | 1.44e-19 | 87.8 |
| MS.gene71575.t1 | AT4G23260 | 25.561 | 223 | 159 | 3 | 32 | 249 | 30 | 250 | 2.46e-19 | 87.4 |
| MS.gene71575.t1 | AT4G23260 | 25.561 | 223 | 159 | 3 | 32 | 249 | 30 | 250 | 2.96e-19 | 87.0 |
| MS.gene71575.t1 | AT3G21910 | 28.112 | 249 | 160 | 9 | 13 | 249 | 24 | 265 | 1.02e-18 | 83.6 |
| MS.gene71575.t1 | AT4G11480 | 22.705 | 207 | 152 | 3 | 46 | 249 | 37 | 238 | 3.13e-18 | 84.0 |
| MS.gene71575.t1 | AT4G11480 | 22.705 | 207 | 152 | 3 | 46 | 249 | 37 | 238 | 3.79e-18 | 84.0 |
| MS.gene71575.t1 | AT4G11480 | 22.705 | 207 | 152 | 3 | 46 | 249 | 37 | 238 | 4.01e-18 | 84.0 |
| MS.gene71575.t1 | AT4G11480 | 22.705 | 207 | 152 | 3 | 46 | 249 | 37 | 238 | 4.26e-18 | 83.6 |
| MS.gene71575.t1 | AT3G21940 | 34.426 | 183 | 97 | 6 | 88 | 252 | 3 | 180 | 4.30e-18 | 79.7 |
| MS.gene71575.t1 | AT1G70690 | 26.190 | 252 | 159 | 10 | 1 | 245 | 2 | 233 | 5.65e-18 | 81.6 |
| MS.gene71575.t1 | AT4G11460 | 30.114 | 176 | 113 | 4 | 83 | 249 | 1 | 175 | 6.63e-18 | 83.2 |
| MS.gene71575.t1 | AT4G04570 | 28.505 | 214 | 143 | 5 | 45 | 250 | 40 | 251 | 7.43e-18 | 82.8 |
| MS.gene71575.t1 | AT4G04570 | 28.505 | 214 | 143 | 5 | 45 | 250 | 40 | 251 | 7.50e-18 | 82.8 |
| MS.gene71575.t1 | AT5G41290 | 26.939 | 245 | 163 | 9 | 11 | 247 | 8 | 244 | 9.18e-18 | 80.9 |
| MS.gene71575.t1 | AT4G23290 | 28.507 | 221 | 144 | 7 | 38 | 249 | 31 | 246 | 1.01e-17 | 82.8 |
| MS.gene71575.t1 | AT3G29040 | 29.435 | 248 | 157 | 8 | 12 | 249 | 13 | 252 | 1.73e-17 | 79.7 |
| MS.gene71575.t1 | AT3G21940 | 32.218 | 239 | 126 | 11 | 36 | 252 | 51 | 275 | 2.52e-17 | 79.7 |
| MS.gene71575.t1 | AT1G63600 | 27.749 | 191 | 116 | 4 | 67 | 245 | 72 | 252 | 4.75e-17 | 79.3 |
| MS.gene71575.t1 | AT3G21920 | 28.125 | 256 | 153 | 10 | 13 | 249 | 24 | 267 | 5.23e-17 | 78.6 |
| MS.gene71575.t1 | AT3G21920 | 28.125 | 256 | 153 | 10 | 13 | 249 | 46 | 289 | 5.84e-17 | 79.0 |
| MS.gene71575.t1 | AT4G23190 | 28.488 | 172 | 114 | 3 | 85 | 249 | 1 | 170 | 1.47e-16 | 79.0 |
| MS.gene71575.t1 | AT4G23190 | 28.488 | 172 | 114 | 3 | 85 | 249 | 1 | 170 | 1.47e-16 | 79.0 |
| MS.gene71575.t1 | AT3G21930 | 27.734 | 256 | 154 | 10 | 13 | 249 | 24 | 267 | 1.86e-16 | 77.4 |
| MS.gene71575.t1 | AT1G63550 | 23.830 | 235 | 146 | 5 | 26 | 246 | 30 | 245 | 1.95e-16 | 77.8 |
| MS.gene71575.t1 | AT4G11470 | 26.761 | 213 | 143 | 6 | 47 | 250 | 38 | 246 | 3.75e-16 | 78.2 |
| MS.gene71575.t1 | AT3G22010 | 27.826 | 230 | 137 | 9 | 38 | 252 | 48 | 263 | 3.79e-16 | 76.3 |
| MS.gene71575.t1 | AT4G11470 | 26.761 | 213 | 143 | 6 | 47 | 250 | 43 | 251 | 4.25e-16 | 77.8 |
| MS.gene71575.t1 | AT3G22040 | 27.888 | 251 | 162 | 9 | 12 | 252 | 16 | 257 | 8.52e-16 | 75.1 |
| MS.gene71575.t1 | AT4G04540 | 24.444 | 225 | 155 | 6 | 39 | 250 | 32 | 254 | 8.71e-16 | 76.6 |
| MS.gene71575.t1 | AT4G04540 | 24.444 | 225 | 155 | 6 | 39 | 250 | 32 | 254 | 1.09e-15 | 76.6 |
| MS.gene71575.t1 | AT4G04540 | 24.444 | 225 | 155 | 6 | 39 | 250 | 32 | 254 | 1.21e-15 | 76.3 |
| MS.gene71575.t1 | AT4G04540 | 24.444 | 225 | 155 | 6 | 39 | 250 | 32 | 254 | 1.26e-15 | 76.6 |
| MS.gene71575.t1 | AT1G63570 | 25.926 | 189 | 119 | 3 | 68 | 246 | 64 | 241 | 2.37e-15 | 74.3 |
| MS.gene71575.t1 | AT1G63570 | 25.926 | 189 | 119 | 3 | 68 | 246 | 64 | 241 | 2.37e-15 | 74.3 |
| MS.gene71575.t1 | AT1G63570 | 25.926 | 189 | 119 | 3 | 68 | 246 | 117 | 294 | 3.23e-15 | 74.3 |
| MS.gene71575.t1 | AT4G04490 | 27.586 | 232 | 145 | 9 | 29 | 249 | 27 | 246 | 3.95e-15 | 75.1 |
| MS.gene71575.t1 | AT4G04510 | 25.792 | 221 | 147 | 4 | 41 | 250 | 34 | 248 | 5.36e-15 | 74.7 |
| MS.gene71575.t1 | AT4G04510 | 25.792 | 221 | 147 | 4 | 41 | 250 | 36 | 250 | 6.30e-15 | 74.3 |
| MS.gene71575.t1 | AT3G22050 | 28.788 | 198 | 111 | 7 | 67 | 249 | 73 | 255 | 1.28e-14 | 71.6 |
| MS.gene71575.t1 | AT4G20680 | 28.000 | 225 | 145 | 8 | 39 | 252 | 49 | 267 | 1.34e-14 | 72.0 |
| MS.gene71575.t1 | AT5G41280 | 25.683 | 183 | 127 | 4 | 68 | 246 | 67 | 244 | 1.40e-14 | 72.0 |
| MS.gene71575.t1 | AT2G01660 | 27.132 | 258 | 150 | 11 | 1 | 247 | 2 | 232 | 1.98e-14 | 71.2 |
| MS.gene71575.t1 | AT2G01660 | 27.132 | 258 | 150 | 11 | 1 | 247 | 2 | 232 | 2.74e-14 | 71.2 |
| MS.gene71575.t1 | AT2G01660 | 27.132 | 258 | 150 | 11 | 1 | 247 | 2 | 232 | 2.90e-14 | 71.2 |
| MS.gene71575.t1 | AT3G21970 | 27.778 | 252 | 159 | 10 | 12 | 249 | 19 | 261 | 3.09e-14 | 70.9 |
| MS.gene71575.t1 | AT3G29050 | 26.054 | 261 | 160 | 9 | 13 | 249 | 22 | 273 | 3.79e-14 | 70.9 |
| MS.gene71575.t1 | AT3G22000 | 28.261 | 230 | 138 | 10 | 39 | 252 | 49 | 267 | 5.81e-14 | 70.1 |
| MS.gene71575.t1 | AT5G41300 | 25.103 | 243 | 162 | 7 | 10 | 244 | 15 | 245 | 1.34e-13 | 69.3 |
| MS.gene71575.t1 | AT1G63590 | 26.500 | 200 | 124 | 6 | 59 | 245 | 55 | 244 | 1.71e-13 | 68.9 |
| MS.gene71575.t1 | AT1G63580 | 24.519 | 208 | 143 | 4 | 46 | 245 | 36 | 237 | 9.11e-13 | 66.6 |
| MS.gene71575.t1 | AT3G21900 | 25.352 | 213 | 149 | 5 | 37 | 249 | 45 | 247 | 1.51e-12 | 65.9 |
| MS.gene71575.t1 | AT5G37660 | 24.696 | 247 | 150 | 9 | 11 | 246 | 16 | 237 | 3.63e-11 | 62.4 |
| MS.gene71575.t1 | AT5G37660 | 24.576 | 236 | 146 | 8 | 18 | 246 | 27 | 237 | 4.97e-11 | 62.0 |
| MS.gene71575.t1 | AT3G60720 | 25.150 | 167 | 106 | 4 | 86 | 250 | 89 | 238 | 5.81e-11 | 61.2 |
| MS.gene71575.t1 | AT3G60720 | 25.150 | 167 | 106 | 4 | 86 | 250 | 89 | 238 | 7.78e-11 | 61.2 |
| MS.gene71575.t1 | AT3G60720 | 25.150 | 167 | 106 | 4 | 86 | 250 | 89 | 238 | 9.42e-11 | 61.2 |
Find 40 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGTTGGTACAATATTT+TGG | 0.104488 | 1.4:-81674953 | None:intergenic |
| TATTCAGACCGTTCGATATT+AGG | 0.205684 | 1.4:+81674671 | MS.gene71575:CDS |
| TGCTTTAGGTTTGATAGAAT+TGG | 0.336798 | 1.4:-81675024 | None:intergenic |
| ATGAGAAGGAGGAAGGAATA+TGG | 0.349250 | 1.4:-81674305 | None:intergenic |
| AGACATTTGCGACAATCTTC+AGG | 0.362672 | 1.4:-81674557 | None:intergenic |
| GGTTTCTACAATACAAATTA+CGG | 0.363088 | 1.4:+81674482 | MS.gene71575:CDS |
| AGTAGTGATCAAACAATATA+TGG | 0.388142 | 1.4:+81674857 | MS.gene71575:CDS |
| TGGACATGCTTGTGTTAGAT+AGG | 0.389375 | 1.4:-81674594 | None:intergenic |
| AAATATTGTACCAACAAGAT+TGG | 0.404642 | 1.4:+81674956 | MS.gene71575:CDS |
| AATTCTACAACCAATCTTGT+TGG | 0.410248 | 1.4:-81674966 | None:intergenic |
| TTAGAGCAAGCTGTTATTTG+AGG | 0.415196 | 1.4:+81674990 | MS.gene71575:CDS |
| AAATGTGGCCTGCTATAATT+TGG | 0.425646 | 1.4:+81674702 | MS.gene71575:CDS |
| ACAGTGTACACCTGATTTGT+CGG | 0.437811 | 1.4:+81674886 | MS.gene71575:CDS |
| CCAAACAGAAAAGAAGCAAT+TGG | 0.439075 | 1.4:+81674614 | MS.gene71575:CDS |
| CGTTTACTTTAGATGTGAAA+AGG | 0.440701 | 1.4:-81674331 | None:intergenic |
| GACTGTTTGAATGAATCTAT+TGG | 0.446053 | 1.4:+81674923 | MS.gene71575:CDS |
| CACTGTGAAACCGACAAATC+AGG | 0.458317 | 1.4:-81674896 | None:intergenic |
| GAGGACAAAATAAACCTCAT+TGG | 0.482522 | 1.4:+81674512 | MS.gene71575:CDS |
| GAATGTGAACAATGCAACTT+TGG | 0.483957 | 1.4:+81674727 | MS.gene71575:CDS |
| TATATTGTTTGATCACTACT+AGG | 0.502209 | 1.4:-81674854 | None:intergenic |
| TATGCTGCAGGAACTTTGCC+AGG | 0.503711 | 1.4:+81674830 | MS.gene71575:CDS |
| TTCAACTCAAAAGTTAACTA+CGG | 0.507432 | 1.4:+81674461 | MS.gene71575:CDS |
| GATAGAGGCGACTACATAAC+CGG | 0.514752 | 1.4:+81674392 | MS.gene71575:CDS |
| GTTGTTATGGTAGGTACTAC+CGG | 0.518720 | 1.4:-81674411 | None:intergenic |
| AAGGATTATGAGAAGGAGGA+AGG | 0.529566 | 1.4:-81674312 | None:intergenic |
| ACATTCCACCAAATTATAGC+AGG | 0.535057 | 1.4:-81674710 | None:intergenic |
| TGAAAAGGATTATGAGAAGG+AGG | 0.542640 | 1.4:-81674316 | None:intergenic |
| TCACATCGTAAGTATGCTGC+AGG | 0.560986 | 1.4:+81674818 | MS.gene71575:CDS |
| ATGTGAAAAGGATTATGAGA+AGG | 0.570955 | 1.4:-81674319 | None:intergenic |
| TGTGGCCTGCTATAATTTGG+TGG | 0.578852 | 1.4:+81674705 | MS.gene71575:CDS |
| GGCAGATCAATTCAATAGTG+TGG | 0.581827 | 1.4:+81674748 | MS.gene71575:CDS |
| CTCCTCTACATATTCCAATG+AGG | 0.587463 | 1.4:-81674526 | None:intergenic |
| CGCTGAGGCCTAATATCGAA+CGG | 0.598988 | 1.4:-81674679 | None:intergenic |
| AACCTCATTGGAATATGTAG+AGG | 0.605663 | 1.4:+81674524 | MS.gene71575:CDS |
| ACAGAAAAGAAGCAATTGGA+TGG | 0.618085 | 1.4:+81674618 | MS.gene71575:CDS |
| GTTTGATCACTACTAGGACC+TGG | 0.622316 | 1.4:-81674848 | None:intergenic |
| TATTAGGCCTCAGCGAAATG+TGG | 0.638853 | 1.4:+81674687 | MS.gene71575:CDS |
| TACAAATTACGGCCAAAACG+AGG | 0.648241 | 1.4:+81674493 | MS.gene71575:CDS |
| AGAAGCAATTGGATGGTACG+AGG | 0.694836 | 1.4:+81674625 | MS.gene71575:CDS |
| TAGCAGGCCACATTTCGCTG+AGG | 0.701616 | 1.4:-81674694 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTGAATGATTTAAAAAACA+AGG | + | chr1.4:81674781-81674800 | MS.gene71575:CDS | 20.0% |
| !!! | GTTATTTTTGTCACATAAAT+AGG | - | chr1.4:81674372-81674391 | None:intergenic | 20.0% |
| ! | AAATATTGTACCAACAAGAT+TGG | + | chr1.4:81674956-81674975 | MS.gene71575:CDS | 25.0% |
| ! | AGTAGTGATCAAACAATATA+TGG | + | chr1.4:81674857-81674876 | MS.gene71575:CDS | 25.0% |
| ! | GGTTTCTACAATACAAATTA+CGG | + | chr1.4:81674482-81674501 | MS.gene71575:CDS | 25.0% |
| ! | TATATTGTTTGATCACTACT+AGG | - | chr1.4:81674857-81674876 | None:intergenic | 25.0% |
| ! | TTAAAAAACAAGGCTAGAAA+TGG | + | chr1.4:81674791-81674810 | MS.gene71575:CDS | 25.0% |
| ! | TTCAACTCAAAAGTTAACTA+CGG | + | chr1.4:81674461-81674480 | MS.gene71575:CDS | 25.0% |
| !! | ATCTTGTTGGTACAATATTT+TGG | - | chr1.4:81674956-81674975 | None:intergenic | 25.0% |
| !! | TCTTGTTGGTACAATATTTT+GGG | - | chr1.4:81674955-81674974 | None:intergenic | 25.0% |
| AATTCTACAACCAATCTTGT+TGG | - | chr1.4:81674969-81674988 | None:intergenic | 30.0% | |
| ATGTGAAAAGGATTATGAGA+AGG | - | chr1.4:81674322-81674341 | None:intergenic | 30.0% | |
| CGTTTACTTTAGATGTGAAA+AGG | - | chr1.4:81674334-81674353 | None:intergenic | 30.0% | |
| GACTGTTTGAATGAATCTAT+TGG | + | chr1.4:81674923-81674942 | MS.gene71575:CDS | 30.0% | |
| TGTGACAAAAATAACGATAG+AGG | + | chr1.4:81674377-81674396 | MS.gene71575:CDS | 30.0% | |
| !!! | TAACTTTTGAGTTGAAAGTC+AGG | - | chr1.4:81674457-81674476 | None:intergenic | 30.0% |
| AAATGTGGCCTGCTATAATT+TGG | + | chr1.4:81674702-81674721 | MS.gene71575:CDS | 35.0% | |
| AACCTCATTGGAATATGTAG+AGG | + | chr1.4:81674524-81674543 | MS.gene71575:CDS | 35.0% | |
| ACAGAAAAGAAGCAATTGGA+TGG | + | chr1.4:81674618-81674637 | MS.gene71575:CDS | 35.0% | |
| ACATTCCACCAAATTATAGC+AGG | - | chr1.4:81674713-81674732 | None:intergenic | 35.0% | |
| CCAAACAGAAAAGAAGCAAT+TGG | + | chr1.4:81674614-81674633 | MS.gene71575:CDS | 35.0% | |
| GAATGTGAACAATGCAACTT+TGG | + | chr1.4:81674727-81674746 | MS.gene71575:CDS | 35.0% | |
| GAGGACAAAATAAACCTCAT+TGG | + | chr1.4:81674512-81674531 | MS.gene71575:CDS | 35.0% | |
| TATTCAGACCGTTCGATATT+AGG | + | chr1.4:81674671-81674690 | MS.gene71575:CDS | 35.0% | |
| TGAAAAGGATTATGAGAAGG+AGG | - | chr1.4:81674319-81674338 | None:intergenic | 35.0% | |
| ! | CCAATTGCTTCTTTTCTGTT+TGG | - | chr1.4:81674617-81674636 | None:intergenic | 35.0% |
| ! | GGTATATGAAAGCGATTTTG+AGG | - | chr1.4:81674436-81674455 | None:intergenic | 35.0% |
| ! | TTAGAGCAAGCTGTTATTTG+AGG | + | chr1.4:81674990-81675009 | MS.gene71575:CDS | 35.0% |
| !!! | AAGCGATTTTGAGGTTGTTA+TGG | - | chr1.4:81674427-81674446 | None:intergenic | 35.0% |
| !!! | GATTTTGAGGTTGTTATGGT+AGG | - | chr1.4:81674423-81674442 | None:intergenic | 35.0% |
| !!! | GGTTTATTTTGTCCTCGTTT+TGG | - | chr1.4:81674508-81674527 | None:intergenic | 35.0% |
| AAGGATTATGAGAAGGAGGA+AGG | - | chr1.4:81674315-81674334 | None:intergenic | 40.0% | |
| AGACATTTGCGACAATCTTC+AGG | - | chr1.4:81674560-81674579 | None:intergenic | 40.0% | |
| ATGAGAAGGAGGAAGGAATA+TGG | - | chr1.4:81674308-81674327 | None:intergenic | 40.0% | |
| CTCCTCTACATATTCCAATG+AGG | - | chr1.4:81674529-81674548 | None:intergenic | 40.0% | |
| GGCAGATCAATTCAATAGTG+TGG | + | chr1.4:81674748-81674767 | MS.gene71575:CDS | 40.0% | |
| GTTGTTATGGTAGGTACTAC+CGG | - | chr1.4:81674414-81674433 | None:intergenic | 40.0% | |
| TACAAATTACGGCCAAAACG+AGG | + | chr1.4:81674493-81674512 | MS.gene71575:CDS | 40.0% | |
| TGGACATGCTTGTGTTAGAT+AGG | - | chr1.4:81674597-81674616 | None:intergenic | 40.0% | |
| ! | ACAGTGTACACCTGATTTGT+CGG | + | chr1.4:81674886-81674905 | MS.gene71575:CDS | 40.0% |
| AGAAGCAATTGGATGGTACG+AGG | + | chr1.4:81674625-81674644 | MS.gene71575:CDS | 45.0% | |
| CACTGTGAAACCGACAAATC+AGG | - | chr1.4:81674899-81674918 | None:intergenic | 45.0% | |
| GATAGAGGCGACTACATAAC+CGG | + | chr1.4:81674392-81674411 | MS.gene71575:CDS | 45.0% | |
| GTTTGATCACTACTAGGACC+TGG | - | chr1.4:81674851-81674870 | None:intergenic | 45.0% | |
| TATTAGGCCTCAGCGAAATG+TGG | + | chr1.4:81674687-81674706 | MS.gene71575:CDS | 45.0% | |
| TCACATCGTAAGTATGCTGC+AGG | + | chr1.4:81674818-81674837 | MS.gene71575:CDS | 45.0% | |
| TGTGGCCTGCTATAATTTGG+TGG | + | chr1.4:81674705-81674724 | MS.gene71575:CDS | 45.0% | |
| CGCTGAGGCCTAATATCGAA+CGG | - | chr1.4:81674682-81674701 | None:intergenic | 50.0% | |
| TATGCTGCAGGAACTTTGCC+AGG | + | chr1.4:81674830-81674849 | MS.gene71575:CDS | 50.0% | |
| TAGCAGGCCACATTTCGCTG+AGG | - | chr1.4:81674697-81674716 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 81674284 | 81675042 | 81674284 | ID=MS.gene71575 |
| chr1.4 | mRNA | 81674284 | 81675042 | 81674284 | ID=MS.gene71575.t1;Parent=MS.gene71575 |
| chr1.4 | exon | 81674284 | 81675042 | 81674284 | ID=MS.gene71575.t1.exon1;Parent=MS.gene71575.t1 |
| chr1.4 | CDS | 81674284 | 81675042 | 81674284 | ID=cds.MS.gene71575.t1;Parent=MS.gene71575.t1 |
| Gene Sequence |
| Protein sequence |
