Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71844.t1 | XP_013470195.1 | 99 | 397 | 4 | 0 | 1 | 397 | 1 | 397 | 4.30E-176 | 627.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71844.t1 | Q84L31 | 74.8 | 424 | 74 | 5 | 1 | 396 | 1 | 419 | 1.0e-125 | 451.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71844.t1 | A0A072VS14 | 99.0 | 397 | 4 | 0 | 1 | 397 | 1 | 397 | 3.1e-176 | 627.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71844 | MS.gene83520 | PPI |
| MS.gene99949 | MS.gene71844 | PPI |
| MS.gene71844 | MS.gene90381 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71844.t1 | MTR_1g111090 | 98.992 | 397 | 4 | 0 | 1 | 397 | 1 | 397 | 0.0 | 796 |
| MS.gene71844.t1 | MTR_7g407040 | 64.899 | 396 | 113 | 8 | 1 | 396 | 1 | 370 | 2.43e-161 | 458 |
| MS.gene71844.t1 | MTR_2g105410 | 55.416 | 397 | 145 | 8 | 1 | 396 | 1 | 366 | 2.22e-142 | 410 |
| MS.gene71844.t1 | MTR_7g037380 | 52.941 | 68 | 30 | 1 | 18 | 83 | 72 | 139 | 3.40e-15 | 73.6 |
| MS.gene71844.t1 | MTR_7g006500 | 67.925 | 53 | 15 | 2 | 149 | 201 | 62 | 112 | 5.96e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71844.t1 | AT3G02540 | 70.093 | 428 | 86 | 8 | 1 | 396 | 1 | 418 | 0.0 | 553 |
| MS.gene71844.t1 | AT3G02540 | 69.930 | 429 | 86 | 8 | 1 | 396 | 1 | 419 | 0.0 | 553 |
| MS.gene71844.t1 | AT5G38470 | 68.421 | 399 | 103 | 9 | 1 | 397 | 1 | 378 | 1.39e-177 | 499 |
| MS.gene71844.t1 | AT1G79650 | 56.281 | 398 | 145 | 9 | 1 | 396 | 1 | 371 | 5.37e-143 | 411 |
| MS.gene71844.t1 | AT1G79650 | 56.030 | 398 | 140 | 9 | 1 | 396 | 1 | 365 | 2.04e-142 | 410 |
| MS.gene71844.t1 | AT1G79650 | 54.087 | 416 | 150 | 10 | 1 | 396 | 1 | 395 | 1.48e-139 | 404 |
| MS.gene71844.t1 | AT1G16190 | 53.401 | 397 | 155 | 5 | 1 | 396 | 1 | 368 | 8.43e-139 | 400 |
| MS.gene71844.t1 | AT5G38470 | 66.265 | 332 | 91 | 8 | 1 | 330 | 1 | 313 | 1.41e-133 | 386 |
| MS.gene71844.t1 | AT1G16190 | 52.547 | 373 | 147 | 5 | 25 | 396 | 2 | 345 | 1.01e-125 | 367 |
| MS.gene71844.t1 | AT1G79650 | 52.261 | 398 | 141 | 10 | 1 | 396 | 1 | 351 | 3.37e-125 | 365 |
| MS.gene71844.t1 | AT3G02540 | 63.430 | 309 | 73 | 6 | 1 | 279 | 1 | 299 | 3.77e-115 | 338 |
| MS.gene71844.t1 | AT5G16090 | 60.526 | 76 | 30 | 0 | 1 | 76 | 1 | 76 | 1.02e-23 | 97.1 |
| MS.gene71844.t1 | AT5G16090 | 50.495 | 101 | 47 | 2 | 292 | 392 | 74 | 171 | 7.82e-23 | 94.7 |
Find 128 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTAGCAGTTGCCGAGGATA+TGG | 0.229870 | 1.3:-75753329 | None:intergenic |
| GCAGCACCAGCACCAATATT+TGG | 0.271370 | 1.3:-75754093 | None:intergenic |
| CCTCCATAGGTTCGTTAATC+AGG | 0.298756 | 1.3:-75754455 | None:intergenic |
| TGCTGGAGATTCAGCTTGTT+CGG | 0.324880 | 1.3:-75753861 | None:intergenic |
| ACTCATGCATGTGGTCTAAA+AGG | 0.325713 | 1.3:-75755185 | None:intergenic |
| AGGGAAGGTTCTGATGTCTA+TGG | 0.340684 | 1.3:+75753489 | MS.gene71844:intron |
| ATGCTTTAGGAACAACCTAT+TGG | 0.341168 | 1.3:+75754615 | MS.gene71844:intron |
| AGTTCAACAAATCCTAGATA+TGG | 0.341539 | 1.3:+75753557 | MS.gene71844:CDS |
| TGCTGCTGGTGCCGGTTCTC+TGG | 0.344680 | 1.3:+75754110 | MS.gene71844:CDS |
| TTCACAGGTTGTGCACTTGC+AGG | 0.353383 | 1.3:-75753896 | None:intergenic |
| TGCTTTAGGAACAACCTATT+GGG | 0.371188 | 1.3:+75754616 | MS.gene71844:intron |
| AATATTGGTGCTGGTGCTGC+TGG | 0.379034 | 1.3:+75754096 | MS.gene71844:CDS |
| ATGGGAGCAGGAGCTGGAGC+TGG | 0.379649 | 1.3:-75753310 | None:intergenic |
| GGAGCTGCAGCTGCAGCCTC+AGG | 0.380645 | 1.3:-75753920 | None:intergenic |
| CTCATCTTATGAGATTGATT+CGG | 0.386341 | 1.3:+75754409 | MS.gene71844:CDS |
| TCATCTTATGAGATTGATTC+GGG | 0.386880 | 1.3:+75754410 | MS.gene71844:CDS |
| TTCAATAGCTTGGCGCTCCT+CGG | 0.390524 | 1.3:-75754680 | None:intergenic |
| TTACAGGGCCTGCCAAATAT+TGG | 0.393136 | 1.3:+75754081 | MS.gene71844:intron |
| GAGATTGATTCGGGATCATC+AGG | 0.398560 | 1.3:+75754419 | MS.gene71844:CDS |
| AAATATTCAACCGCCCTCTC+AGG | 0.399566 | 1.3:-75753639 | None:intergenic |
| TGGGCAGGCTGCATCTAATC+TGG | 0.400887 | 1.3:+75753509 | MS.gene71844:CDS |
| GCTGGAGATTCAGCTTGTTC+GGG | 0.405755 | 1.3:-75753860 | None:intergenic |
| GAGGATATGGGAGCAGGAGC+TGG | 0.408313 | 1.3:-75753316 | None:intergenic |
| GGCAAATCCACAAATATTGC+AGG | 0.411244 | 1.3:+75754282 | MS.gene71844:CDS |
| AAGAAAACCTGCAATATTTG+TGG | 0.413342 | 1.3:-75754289 | None:intergenic |
| TGGGAGGAGGAAGCTGGGAT+AGG | 0.427311 | 1.3:+75753577 | MS.gene71844:CDS |
| AGGTCTAGAGGATTAGCATT+AGG | 0.432634 | 1.3:-75753980 | None:intergenic |
| TTAGGTCCACTTGAGGTAAC+AGG | 0.432965 | 1.3:-75753962 | None:intergenic |
| CAGCAGCCATCTGTCCCAAT+AGG | 0.439096 | 1.3:-75754630 | None:intergenic |
| GGTGCTGGTGCTGCTGGTGC+CGG | 0.439464 | 1.3:+75754102 | MS.gene71844:CDS |
| TAGATATGGGAGGAGGAAGC+TGG | 0.440681 | 1.3:+75753571 | MS.gene71844:CDS |
| CACGGTGCCGCAGTTGCAGC+AGG | 0.444802 | 1.3:-75753148 | None:intergenic |
| GCACCATAGCTCGCAATGCT+TGG | 0.445098 | 1.3:-75754258 | None:intergenic |
| TTTGCCAAGCTCTTGTAGCA+TGG | 0.451224 | 1.3:-75754379 | None:intergenic |
| TGGGAGCAGGAGCTGGAGCT+GGG | 0.454567 | 1.3:-75753309 | None:intergenic |
| GCTGCATCTAATCTGGTTGC+CGG | 0.462863 | 1.3:+75753516 | MS.gene71844:CDS |
| CATTGTGATCATGCTTTCAA+AGG | 0.464553 | 1.3:+75752492 | MS.gene71844:CDS |
| AACTTACACGTTCAATAGCT+TGG | 0.465361 | 1.3:-75754690 | None:intergenic |
| CTTATTGCAGCTTGAAGCAA+TGG | 0.466176 | 1.3:+75755092 | MS.gene71844:intron |
| TCAATAGCTTGGCGCTCCTC+GGG | 0.468475 | 1.3:-75754679 | None:intergenic |
| CAGCCCATGCTACAAGAGCT+TGG | 0.469143 | 1.3:+75754375 | MS.gene71844:intron |
| AGCTTCCTCCTCCCATATCT+AGG | 0.469763 | 1.3:-75753569 | None:intergenic |
| CGCCCTCTCAGGGTTATTGA+AGG | 0.470824 | 1.3:-75753628 | None:intergenic |
| GAAGGTGCAGCAACAGATGC+AGG | 0.472270 | 1.3:-75753286 | None:intergenic |
| GTTCAACAAATCCTAGATAT+GGG | 0.475757 | 1.3:+75753558 | MS.gene71844:CDS |
| GAACCTATGGAGGGCGGAGA+AGG | 0.477244 | 1.3:+75754465 | MS.gene71844:CDS |
| CCTGCTCCTGTTACCTCAAG+TGG | 0.477887 | 1.3:+75753956 | MS.gene71844:CDS |
| CGAAGTCACGCCACAAGACT+CGG | 0.479179 | 1.3:+75751512 | MS.gene71844:CDS |
| TTGTGCACTTGCAGGCGCTC+GGG | 0.479546 | 1.3:-75753888 | None:intergenic |
| TCGCCTGATTAACGAACCTA+TGG | 0.480298 | 1.3:+75754452 | MS.gene71844:CDS |
| GTTGTGCACTTGCAGGCGCT+CGG | 0.483214 | 1.3:-75753889 | None:intergenic |
| AGTAAGCCCGCGTCTGGTGA+AGG | 0.483949 | 1.3:+75752893 | MS.gene71844:CDS |
| CAGCAAATGCTTATTCATCA+AGG | 0.483953 | 1.3:+75752412 | MS.gene71844:CDS |
| TTGCCAAGCTCTTGTAGCAT+GGG | 0.484703 | 1.3:-75754378 | None:intergenic |
| GGGAGGAGGAAGCTGGGATA+GGG | 0.488129 | 1.3:+75753578 | MS.gene71844:CDS |
| TGATCGTGCTATAGTATTGG+AGG | 0.491124 | 1.3:+75755119 | MS.gene71844:CDS |
| CACCAGCACCAATATTTGGC+AGG | 0.492935 | 1.3:-75754089 | None:intergenic |
| CACCCTTCTCCGCCCTCCAT+AGG | 0.495258 | 1.3:-75754468 | None:intergenic |
| AGGTTCTGATGTCTATGGGC+AGG | 0.496402 | 1.3:+75753494 | MS.gene71844:CDS |
| GTAGCAGTTGCCGAGGATAT+GGG | 0.499649 | 1.3:-75753328 | None:intergenic |
| GCGTAGAAAATCCAGAGAAC+CGG | 0.500402 | 1.3:-75754121 | None:intergenic |
| GCAGGAGCTGGAGCTGGGGA+AGG | 0.501793 | 1.3:-75753304 | None:intergenic |
| ATAAGCATTTGCTGTGCAGC+AGG | 0.503524 | 1.3:-75752403 | None:intergenic |
| CCACTTGAGGTAACAGGAGC+AGG | 0.508160 | 1.3:-75753956 | None:intergenic |
| GCAGGCGCTCGGGACACTGC+TGG | 0.508270 | 1.3:-75753878 | None:intergenic |
| TGGCAGAGTAAGCCCGCGTC+TGG | 0.509702 | 1.3:+75752887 | MS.gene71844:intron |
| TCTGGTTGCCGGTAGCAACT+TGG | 0.522344 | 1.3:+75753527 | MS.gene71844:CDS |
| CCTGATTAACGAACCTATGG+AGG | 0.524546 | 1.3:+75754455 | MS.gene71844:CDS |
| GGTTGCCGGTAGCAACTTGG+AGG | 0.526533 | 1.3:+75753530 | MS.gene71844:CDS |
| TCCTCTAGACCTCTTTCCCC+AGG | 0.527390 | 1.3:+75753991 | MS.gene71844:CDS |
| CGACTGTTACCTGGGGAAAG+AGG | 0.528080 | 1.3:-75754000 | None:intergenic |
| GAAGGATGGTACCACCTTGG+AGG | 0.528142 | 1.3:+75752444 | MS.gene71844:CDS |
| CAAACTTCTCTCACCTTCGC+TGG | 0.531589 | 1.3:-75752938 | None:intergenic |
| TGTTCCCTCCAAGTTGCTAC+CGG | 0.534141 | 1.3:-75753535 | None:intergenic |
| TTATTGCAGCTTGAAGCAAT+GGG | 0.537260 | 1.3:+75755093 | MS.gene71844:intron |
| CATGTGGTCTAAAAGGTAGT+TGG | 0.538667 | 1.3:-75755178 | None:intergenic |
| ATAGACATCTACACCTTGAA+CGG | 0.540608 | 1.3:-75752380 | None:intergenic |
| GTTCCAAGCATTGCGAGCTA+TGG | 0.544462 | 1.3:+75754255 | MS.gene71844:intron |
| GGAGCAGGCTGAGCTGCTTG+TGG | 0.545404 | 1.3:-75753941 | None:intergenic |
| GGGAAGGTTCTGATGTCTAT+GGG | 0.550980 | 1.3:+75753490 | MS.gene71844:intron |
| GTTGCCGAGGATATGGGAGC+AGG | 0.551906 | 1.3:-75753322 | None:intergenic |
| TAGGAGCAGCACTTGTCTGT+GGG | 0.552599 | 1.3:-75753090 | None:intergenic |
| GCTGCAGCCTCAGGATTCAC+AGG | 0.553492 | 1.3:-75753911 | None:intergenic |
| AGCATTGCGAGCTATGGTGC+AGG | 0.553590 | 1.3:+75754261 | MS.gene71844:CDS |
| CTATTGGGACAGATGGCTGC+TGG | 0.554126 | 1.3:+75754631 | MS.gene71844:CDS |
| AATATTCAACCGCCCTCTCA+GGG | 0.556278 | 1.3:-75753638 | None:intergenic |
| TCAAGCTCCTGCTGCAACTG+CGG | 0.558262 | 1.3:+75753141 | MS.gene71844:CDS |
| GGCCTGCCAAATATTGGTGC+TGG | 0.565166 | 1.3:+75754087 | MS.gene71844:CDS |
| TTTGAAGGATGGTACCACCT+TGG | 0.566393 | 1.3:+75752441 | MS.gene71844:CDS |
| GTAGGAGCAGCACTTGTCTG+TGG | 0.567111 | 1.3:-75753091 | None:intergenic |
| AGCTCCTGCTCCCATATCCT+CGG | 0.569515 | 1.3:+75753318 | MS.gene71844:CDS |
| AGATATGGGAGGAGGAAGCT+GGG | 0.572319 | 1.3:+75753572 | MS.gene71844:CDS |
| GTAAGCCCGCGTCTGGTGAA+GGG | 0.575627 | 1.3:+75752894 | MS.gene71844:CDS |
| GAACAACCTATTGGGACAGA+TGG | 0.579220 | 1.3:+75754624 | MS.gene71844:CDS |
| GTGGTCTAAAAGGTAGTTGG+CGG | 0.579276 | 1.3:-75755175 | None:intergenic |
| TTCAAATGCTCCTCCAGCGA+AGG | 0.580319 | 1.3:+75752925 | MS.gene71844:CDS |
| CAAATCCTAGATATGGGAGG+AGG | 0.580761 | 1.3:+75753564 | MS.gene71844:CDS |
| AACCTATGGAGGGCGGAGAA+GGG | 0.586771 | 1.3:+75754466 | MS.gene71844:CDS |
| GGGAGCAGGAGCTGGAGCTG+GGG | 0.590515 | 1.3:-75753308 | None:intergenic |
| ACCTGGGGAAAGAGGTCTAG+AGG | 0.592015 | 1.3:-75753992 | None:intergenic |
| CTTGAGGTGAAACAGACACT+GGG | 0.598069 | 1.3:-75753123 | None:intergenic |
| AGTAGACCCTTCACCAGACG+CGG | 0.598769 | 1.3:-75752900 | None:intergenic |
| AGCAAATGCTTATTCATCAA+GGG | 0.601247 | 1.3:+75752413 | MS.gene71844:CDS |
| CGAATCAATCTCATAAGATG+AGG | 0.606271 | 1.3:-75754408 | None:intergenic |
| GCTTGAGGTGAAACAGACAC+TGG | 0.613953 | 1.3:-75753124 | None:intergenic |
| TGCCTTCAATAACCCTGAGA+GGG | 0.615258 | 1.3:+75753626 | MS.gene71844:CDS |
| GCAGTTGCAGCAGGAGCTTG+AGG | 0.616444 | 1.3:-75753139 | None:intergenic |
| ACTTCTCTCACCTTCGCTGG+AGG | 0.619890 | 1.3:-75752935 | None:intergenic |
| TAGGTTCGTTAATCAGGCGA+AGG | 0.621575 | 1.3:-75754449 | None:intergenic |
| CTGATTAACGAACCTATGGA+GGG | 0.626493 | 1.3:+75754456 | MS.gene71844:CDS |
| ATTAGCATTAGGTCCACTTG+AGG | 0.629093 | 1.3:-75753969 | None:intergenic |
| TATTTACGTAGCAGTTGCCG+AGG | 0.633237 | 1.3:-75753335 | None:intergenic |
| CTTCAATAACCCTGAGAGGG+CGG | 0.633530 | 1.3:+75753629 | MS.gene71844:CDS |
| TGAGGGAAAACCGAGTCTTG+TGG | 0.634415 | 1.3:-75751522 | None:intergenic |
| GAGGTGAAACAGACACTGGG+GGG | 0.636174 | 1.3:-75753120 | None:intergenic |
| AGGAGCAGCACTTGTCTGTG+GGG | 0.638148 | 1.3:-75753089 | None:intergenic |
| GTTCGTCGAACTCATGCATG+TGG | 0.641221 | 1.3:-75755194 | None:intergenic |
| CTGCCTTCAATAACCCTGAG+AGG | 0.652037 | 1.3:+75753625 | MS.gene71844:CDS |
| ATCAGTAACTGTCACACCCG+AGG | 0.657070 | 1.3:+75754663 | MS.gene71844:CDS |
| TGAGGTGAAACAGACACTGG+GGG | 0.659088 | 1.3:-75753121 | None:intergenic |
| GTAGACCCTTCACCAGACGC+GGG | 0.666940 | 1.3:-75752899 | None:intergenic |
| GGTGTGACAGTTACTGATTG+TGG | 0.672986 | 1.3:-75754658 | None:intergenic |
| GTTGCCGGTAGCAACTTGGA+GGG | 0.675122 | 1.3:+75753531 | MS.gene71844:CDS |
| CAACAAATCCTAGATATGGG+AGG | 0.680457 | 1.3:+75753561 | MS.gene71844:CDS |
| AGGTGAAACAGACACTGGGG+GGG | 0.685526 | 1.3:-75753119 | None:intergenic |
| TGCACAACCTGTGAATCCTG+AGG | 0.701039 | 1.3:+75753904 | MS.gene71844:CDS |
| ATTAACGAACCTATGGAGGG+CGG | 0.702160 | 1.3:+75754459 | MS.gene71844:CDS |
| TTGAGGTGAAACAGACACTG+GGG | 0.743648 | 1.3:-75753122 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAAAAAATTCTTC+TGG | + | chr1.3:75754038-75754057 | MS.gene71844:intron | 10.0% |
| !! | ATTTAAATAAAAAATTAACC+AGG | - | chr1.3:75753813-75753832 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAAATTCTTCT+GGG | + | chr1.3:75754039-75754058 | MS.gene71844:intron | 10.0% |
| !!! | AGAACTTTTTTTTTAATATA+TGG | + | chr1.3:75752867-75752886 | MS.gene71844:intron | 10.0% |
| !!! | TTATAATTGTTTTTGTATAT+TGG | + | chr1.3:75754524-75754543 | MS.gene71844:intron | 10.0% |
| !!! | TTTTTATTATTTTTGAGTTT+TGG | + | chr1.3:75752639-75752658 | MS.gene71844:intron | 10.0% |
| !! | AAAATACAATAAATAGGTAA+CGG | - | chr1.3:75754818-75754837 | None:intergenic | 15.0% |
| !!! | AAGATTAAATTTTTTGAAAC+AGG | + | chr1.3:75753469-75753488 | MS.gene71844:intron | 15.0% |
| !!! | ACATTATACATTTGTTAATT+AGG | + | chr1.3:75754891-75754910 | MS.gene71844:intron | 15.0% |
| !!! | AGATTAAATTTTTTGAAACA+GGG | + | chr1.3:75753470-75753489 | MS.gene71844:intron | 15.0% |
| !!! | ATAATTTTGTACATTGAAAA+TGG | + | chr1.3:75753401-75753420 | MS.gene71844:intron | 15.0% |
| !! | AAATTACAAAATACAGAGAA+AGG | - | chr1.3:75755049-75755068 | None:intergenic | 20.0% |
| !! | AATATAAGACATAACTACTA+AGG | - | chr1.3:75754319-75754338 | None:intergenic | 20.0% |
| !! | ATAGAATATAACAAGCATTA+AGG | - | chr1.3:75752832-75752851 | None:intergenic | 20.0% |
| !! | ATTCTGTTTACTTTAATGTT+TGG | + | chr1.3:75753357-75753376 | MS.gene71844:intron | 20.0% |
| !! | ATTTGATTGTTAGTTAAGTT+AGG | + | chr1.3:75751653-75751672 | MS.gene71844:intron | 20.0% |
| !! | TTGTTATATATTTGAGTCTT+AGG | + | chr1.3:75754974-75754993 | MS.gene71844:intron | 20.0% |
| !! | TTTGATTGTTAGTTAAGTTA+GGG | + | chr1.3:75751654-75751673 | MS.gene71844:intron | 20.0% |
| !!! | AATGCTTGTTATATTCTATT+CGG | + | chr1.3:75752833-75752852 | MS.gene71844:intron | 20.0% |
| !!! | ATTGTTTTTGTATATTGGAA+TGG | + | chr1.3:75754529-75754548 | MS.gene71844:intron | 20.0% |
| !!! | CTGTATTTTGTAATTTATGT+GGG | + | chr1.3:75755053-75755072 | MS.gene71844:intron | 20.0% |
| !!! | GAATTTTGTTGTTAAGTTTT+TGG | + | chr1.3:75751846-75751865 | MS.gene71844:intron | 20.0% |
| !!! | TATTATTTTTGAGTTTTGGT+TGG | + | chr1.3:75752643-75752662 | MS.gene71844:intron | 20.0% |
| !!! | TCTGAATTATGATTTTTAGT+GGG | + | chr1.3:75751824-75751843 | MS.gene71844:intron | 20.0% |
| !!! | TCTGTATTTTGTAATTTATG+TGG | + | chr1.3:75755052-75755071 | MS.gene71844:intron | 20.0% |
| !!! | TTACTTTAATGTTTGGAATT+TGG | + | chr1.3:75753364-75753383 | MS.gene71844:intron | 20.0% |
| !!! | TTCTGAATTATGATTTTTAG+TGG | + | chr1.3:75751823-75751842 | MS.gene71844:intron | 20.0% |
| !!! | TTGAGTTGTTTAGATATATT+TGG | + | chr1.3:75753197-75753216 | MS.gene71844:intron | 20.0% |
| !!! | TTGTTTTTGTATATTGGAAT+GGG | + | chr1.3:75754530-75754549 | MS.gene71844:intron | 20.0% |
| !!! | TTTTTGTTGTTATATTTGCT+GGG | + | chr1.3:75752993-75753012 | MS.gene71844:intron | 20.0% |
| !!! | TTTTTTGTTGTTATATTTGC+TGG | + | chr1.3:75752992-75753011 | MS.gene71844:intron | 20.0% |
| ! | AAAAAAAAAATTCTTCTGGG+TGG | + | chr1.3:75754042-75754061 | MS.gene71844:intron | 25.0% |
| ! | AAAAATATAGAAACCGTTCA+AGG | + | chr1.3:75752367-75752386 | MS.gene71844:CDS | 25.0% |
| ! | AAAATCTCTTCATAAGTACT+AGG | + | chr1.3:75751965-75751984 | MS.gene71844:intron | 25.0% |
| ! | AACAATTATGTATTCTTTGC+AGG | + | chr1.3:75753066-75753085 | MS.gene71844:intron | 25.0% |
| ! | AAGAATCATCAAGAAATAAC+AGG | - | chr1.3:75753745-75753764 | None:intergenic | 25.0% |
| ! | ATACTTAACTGTATGTTACA+GGG | + | chr1.3:75754066-75754085 | MS.gene71844:intron | 25.0% |
| ! | ATATAGCAGAAAAACAATTG+TGG | - | chr1.3:75752301-75752320 | None:intergenic | 25.0% |
| ! | CAAAACCTATTAAGACTATA+AGG | + | chr1.3:75754760-75754779 | MS.gene71844:intron | 25.0% |
| ! | GAGGTTAAATTCACTAAATA+AGG | - | chr1.3:75752196-75752215 | None:intergenic | 25.0% |
| ! | GCACTGAATTTATTACTTAT+AGG | + | chr1.3:75754186-75754205 | MS.gene71844:intron | 25.0% |
| ! | GTCGAGAAAATACAATAAAT+AGG | - | chr1.3:75754824-75754843 | None:intergenic | 25.0% |
| ! | GTGCATAAATAGTTCAAATT+TGG | + | chr1.3:75754918-75754937 | MS.gene71844:intron | 25.0% |
| ! | TAATGGAACAATCAAGATAA+TGG | - | chr1.3:75753435-75753454 | None:intergenic | 25.0% |
| ! | TATACTTAACTGTATGTTAC+AGG | + | chr1.3:75754065-75754084 | MS.gene71844:intron | 25.0% |
| ! | TATTAAGACTATAAGGACTA+AGG | + | chr1.3:75754767-75754786 | MS.gene71844:intron | 25.0% |
| ! | TTATATATTTGAGTCTTAGG+CGG | + | chr1.3:75754977-75754996 | MS.gene71844:intron | 25.0% |
| ! | TTCCTATATATTACAGTTAC+CGG | + | chr1.3:75753710-75753729 | MS.gene71844:intron | 25.0% |
| !! | CTTTTAGCAACATAGTTTAA+TGG | - | chr1.3:75753452-75753471 | None:intergenic | 25.0% |
| !! | GATTCTTACATATCTTGTTT+CGG | + | chr1.3:75753758-75753777 | MS.gene71844:intron | 25.0% |
| !! | TATTTTGTAATTTATGTGGG+TGG | + | chr1.3:75755056-75755075 | MS.gene71844:intron | 25.0% |
| !! | TTAGTCCTTATAGTCTTAAT+AGG | - | chr1.3:75754768-75754787 | None:intergenic | 25.0% |
| !! | TTCTATATTTTTCTTGACTG+CGG | - | chr1.3:75752359-75752378 | None:intergenic | 25.0% |
| !! | TTTAAGTTATGATTTCGATG+TGG | + | chr1.3:75751767-75751786 | MS.gene71844:intron | 25.0% |
| !!! | GTTGTTAAGTTTTTGGTTAT+TGG | + | chr1.3:75751853-75751872 | MS.gene71844:intron | 25.0% |
| !!! | GTTGTTGATTTGAATTTTCT+TGG | + | chr1.3:75751720-75751739 | MS.gene71844:intron | 25.0% |
| !!! | GTTTGAGTCTTATATGATTT+TGG | + | chr1.3:75753783-75753802 | MS.gene71844:intron | 25.0% |
| !!! | TAAATTTTTTGAAACAGGGA+AGG | + | chr1.3:75753474-75753493 | MS.gene71844:intron | 25.0% |
| !!! | TTTTGTTGTTATATTTGCTG+GGG | + | chr1.3:75752994-75753013 | MS.gene71844:intron | 25.0% |
| AAAACTCGATCAACATATGT+AGG | - | chr1.3:75754854-75754873 | None:intergenic | 30.0% | |
| AAACTCGATCAACATATGTA+GGG | - | chr1.3:75754853-75754872 | None:intergenic | 30.0% | |
| AAATAACAGGAATTCCAAAC+CGG | - | chr1.3:75753732-75753751 | None:intergenic | 30.0% | |
| AACATAATCAACTCCAGTTA+TGG | - | chr1.3:75752771-75752790 | None:intergenic | 30.0% | |
| AACCGGTAACTGTAATATAT+AGG | - | chr1.3:75753715-75753734 | None:intergenic | 30.0% | |
| AAGAAAACCTGCAATATTTG+TGG | - | chr1.3:75754292-75754311 | None:intergenic | 30.0% | |
| AAGTCAATAATTAACCGAAC+AGG | - | chr1.3:75751698-75751717 | None:intergenic | 30.0% | |
| AATCTTCATTTCAATTCGAC+AGG | + | chr1.3:75753263-75753282 | MS.gene71844:intron | 30.0% | |
| ACAAGCATTAAGGAATGAAA+AGG | - | chr1.3:75752822-75752841 | None:intergenic | 30.0% | |
| AGAAAATGACAGATCGATTA+AGG | - | chr1.3:75754737-75754756 | None:intergenic | 30.0% | |
| AGATTCAGAGTTCATTTGAA+TGG | - | chr1.3:75753248-75753267 | None:intergenic | 30.0% | |
| AGCAAATGCTTATTCATCAA+GGG | + | chr1.3:75752413-75752432 | MS.gene71844:CDS | 30.0% | |
| AGTCAATAATTAACCGAACA+GGG | - | chr1.3:75751697-75751716 | None:intergenic | 30.0% | |
| AGTTCAACAAATCCTAGATA+TGG | + | chr1.3:75753557-75753576 | MS.gene71844:CDS | 30.0% | |
| CTCAATTATTGAAATTCTCG+TGG | - | chr1.3:75752067-75752086 | None:intergenic | 30.0% | |
| CTCATCTTATGAGATTGATT+CGG | + | chr1.3:75754409-75754428 | MS.gene71844:CDS | 30.0% | |
| GGTTCAGAATAAAAACAACA+CGG | - | chr1.3:75752280-75752299 | None:intergenic | 30.0% | |
| GTTCAACAAATCCTAGATAT+GGG | + | chr1.3:75753558-75753577 | MS.gene71844:CDS | 30.0% | |
| TATATATTTGAGTCTTAGGC+GGG | + | chr1.3:75754978-75754997 | MS.gene71844:intron | 30.0% | |
| TGTCTTATATTCTCTTCTTG+TGG | + | chr1.3:75754328-75754347 | MS.gene71844:intron | 30.0% | |
| TGTTTGGATCATTACTTTCT+AGG | + | chr1.3:75751915-75751934 | MS.gene71844:intron | 30.0% | |
| TTGCAACAAAAATGAGGAAT+TGG | + | chr1.3:75755152-75755171 | MS.gene71844:CDS | 30.0% | |
| TTTGTCTATTTAGCCATAAC+TGG | + | chr1.3:75752755-75752774 | MS.gene71844:intron | 30.0% | |
| ! | ATATATTACAGTTACCGGTT+TGG | + | chr1.3:75753715-75753734 | MS.gene71844:intron | 30.0% |
| ! | ATTGTTTCTCAGAAATATGG+AGG | + | chr1.3:75754948-75754967 | MS.gene71844:intron | 30.0% |
| ! | CCATATTTCTGAGAAACAAT+AGG | - | chr1.3:75754948-75754967 | None:intergenic | 30.0% |
| ! | CCTATTGTTTCTCAGAAATA+TGG | + | chr1.3:75754945-75754964 | MS.gene71844:intron | 30.0% |
| ! | TCATCTTATGAGATTGATTC+GGG | + | chr1.3:75754410-75754429 | MS.gene71844:CDS | 30.0% |
| ! | TGTTTTCAGTTCCTGTAAAT+GGG | - | chr1.3:75753040-75753059 | None:intergenic | 30.0% |
| ! | TTTTGATCGTGCTATAGTAT+TGG | + | chr1.3:75755116-75755135 | MS.gene71844:CDS | 30.0% |
| !! | AATCAATGTAGTTTTCGAGA+CGG | - | chr1.3:75752542-75752561 | None:intergenic | 30.0% |
| !!! | ATTTTTGAGTTTTGGTTGGT+TGG | + | chr1.3:75752647-75752666 | MS.gene71844:intron | 30.0% |
| !!! | GTGTTTTTTTTTTCCCTGTT+CGG | + | chr1.3:75751681-75751700 | MS.gene71844:intron | 30.0% |
| AAAAATGTCCTAGAAACACC+AGG | + | chr1.3:75755014-75755033 | MS.gene71844:intron | 35.0% | |
| AAAATGTCCTAGAAACACCA+GGG | + | chr1.3:75755015-75755034 | MS.gene71844:intron | 35.0% | |
| AAAGCCAAAAAGTAAGCCAA+TGG | - | chr1.3:75754591-75754610 | None:intergenic | 35.0% | |
| AACTTACACGTTCAATAGCT+TGG | - | chr1.3:75754693-75754712 | None:intergenic | 35.0% | |
| ACTTGAAAATACCTGTCCAT+TGG | + | chr1.3:75754572-75754591 | MS.gene71844:intron | 35.0% | |
| AGATCTTAACCACTCCAAAT+TGG | - | chr1.3:75752691-75752710 | None:intergenic | 35.0% | |
| AGTTTATCCCAGCTATCTTA+AGG | + | chr1.3:75752723-75752742 | MS.gene71844:intron | 35.0% | |
| ATAGACATCTACACCTTGAA+CGG | - | chr1.3:75752383-75752402 | None:intergenic | 35.0% | |
| ATATATTTGAGTCTTAGGCG+GGG | + | chr1.3:75754979-75754998 | MS.gene71844:intron | 35.0% | |
| CAGCAAATGCTTATTCATCA+AGG | + | chr1.3:75752412-75752431 | MS.gene71844:CDS | 35.0% | |
| CATGTAAAACAAGTCACTCA+CGG | - | chr1.3:75753169-75753188 | None:intergenic | 35.0% | |
| CATTGTGATCATGCTTTCAA+AGG | + | chr1.3:75752492-75752511 | MS.gene71844:CDS | 35.0% | |
| CGAATCAATCTCATAAGATG+AGG | - | chr1.3:75754411-75754430 | None:intergenic | 35.0% | |
| CTGTGTTTGCGACAAAATAA+CGG | - | chr1.3:75752585-75752604 | None:intergenic | 35.0% | |
| CTTTGCTTGCAACAAAAATG+AGG | + | chr1.3:75755146-75755165 | MS.gene71844:CDS | 35.0% | |
| GAAGGATATTACCCATTTAC+AGG | + | chr1.3:75753026-75753045 | MS.gene71844:intron | 35.0% | |
| GCAATGAAACTTCTGATCAA+AGG | - | chr1.3:75752027-75752046 | None:intergenic | 35.0% | |
| GTGGTATGTAGAATATGATG+TGG | + | chr1.3:75751786-75751805 | MS.gene71844:intron | 35.0% | |
| GTTTATCCCAGCTATCTTAA+GGG | + | chr1.3:75752724-75752743 | MS.gene71844:intron | 35.0% | |
| TGCAGCAATAACAAGAATCA+GGG | - | chr1.3:75754357-75754376 | None:intergenic | 35.0% | |
| TTATTGCAGCTTGAAGCAAT+GGG | + | chr1.3:75755093-75755112 | MS.gene71844:intron | 35.0% | |
| ! | CTGTTTTCAGTTCCTGTAAA+TGG | - | chr1.3:75753041-75753060 | None:intergenic | 35.0% |
| ! | GTGGTGTTTGATAGTTATAC+TGG | + | chr1.3:75752235-75752254 | MS.gene71844:intron | 35.0% |
| ! | GTTTTCGTCAAGACTCTTAA+AGG | + | chr1.3:75751474-75751493 | MS.gene71844:CDS | 35.0% |
| !! | ATGCTTTAGGAACAACCTAT+TGG | + | chr1.3:75754615-75754634 | MS.gene71844:intron | 35.0% |
| !! | ATGTTGATCGAGTTTTGTCT+AGG | + | chr1.3:75754858-75754877 | MS.gene71844:intron | 35.0% |
| !! | TCATCAAGGGAAAGTTTTGA+AGG | + | chr1.3:75752426-75752445 | MS.gene71844:CDS | 35.0% |
| !! | TGCTTTAGGAACAACCTATT+GGG | + | chr1.3:75754616-75754635 | MS.gene71844:intron | 35.0% |
| !! | TTTGGCTTTCAACATGCTTT+AGG | + | chr1.3:75754602-75754621 | MS.gene71844:intron | 35.0% |
| !!! | AGCTACTTTATTTTCCTCCA+AGG | - | chr1.3:75752461-75752480 | None:intergenic | 35.0% |
| !!! | TACTTTATTTTCCTCCAAGG+TGG | - | chr1.3:75752458-75752477 | None:intergenic | 35.0% |
| !!! | TTATATGATTTTGGCTTGCC+TGG | + | chr1.3:75753792-75753811 | MS.gene71844:intron | 35.0% |
| ACTCATGCATGTGGTCTAAA+AGG | - | chr1.3:75755188-75755207 | None:intergenic | 40.0% | |
| AGTTCCACATTGTCTCTGTT+TGG | + | chr1.3:75751899-75751918 | MS.gene71844:intron | 40.0% | |
| ATAAAACAGCGACTGTTACC+TGG | - | chr1.3:75754012-75754031 | None:intergenic | 40.0% | |
| ATTAGCATTAGGTCCACTTG+AGG | - | chr1.3:75753972-75753991 | None:intergenic | 40.0% | |
| ATTGTGAAGCAGAAGTAGTC+TGG | - | chr1.3:75752620-75752639 | None:intergenic | 40.0% | |
| CAAAAAGTAAGCCAATGGAC+AGG | - | chr1.3:75754586-75754605 | None:intergenic | 40.0% | |
| CAACAAATCCTAGATATGGG+AGG | + | chr1.3:75753561-75753580 | MS.gene71844:CDS | 40.0% | |
| CATGTGGTCTAAAAGGTAGT+TGG | - | chr1.3:75755181-75755200 | None:intergenic | 40.0% | |
| CTGATTAACGAACCTATGGA+GGG | + | chr1.3:75754456-75754475 | MS.gene71844:CDS | 40.0% | |
| CTGCAGCAATAACAAGAATC+AGG | - | chr1.3:75754358-75754377 | None:intergenic | 40.0% | |
| CTTATTGCAGCTTGAAGCAA+TGG | + | chr1.3:75755092-75755111 | MS.gene71844:intron | 40.0% | |
| GAGTCGAAATCAGAGTTTGA+GGG | - | chr1.3:75751542-75751561 | None:intergenic | 40.0% | |
| GCTTCAAGCTGCAATAAGAA+AGG | - | chr1.3:75755090-75755109 | None:intergenic | 40.0% | |
| GCTTGGAACTGGAATGAAAA+TGG | - | chr1.3:75754244-75754263 | None:intergenic | 40.0% | |
| GGCAAATCCACAAATATTGC+AGG | + | chr1.3:75754282-75754301 | MS.gene71844:CDS | 40.0% | |
| TAAAACAGCGACTGTTACCT+GGG | - | chr1.3:75754011-75754030 | None:intergenic | 40.0% | |
| TAATTGACCCTGGTGTTTCT+AGG | - | chr1.3:75755025-75755044 | None:intergenic | 40.0% | |
| TGAGTCGAAATCAGAGTTTG+AGG | - | chr1.3:75751543-75751562 | None:intergenic | 40.0% | |
| TGATCCAAACAGAGACAATG+TGG | - | chr1.3:75751906-75751925 | None:intergenic | 40.0% | |
| TGGAATCTCACATGCCAATT+TGG | + | chr1.3:75752674-75752693 | MS.gene71844:intron | 40.0% | |
| TGGACTGTCAAAAGTGATAC+CGG | + | chr1.3:75752150-75752169 | MS.gene71844:intron | 40.0% | |
| TTGCTGGGGTATAGTAAAGA+AGG | + | chr1.3:75753008-75753027 | MS.gene71844:intron | 40.0% | |
| ! | AGGTCTAGAGGATTAGCATT+AGG | - | chr1.3:75753983-75754002 | None:intergenic | 40.0% |
| ! | TGATCGTGCTATAGTATTGG+AGG | + | chr1.3:75755119-75755138 | MS.gene71844:CDS | 40.0% |
| !!! | CAAGGGAAAGTTTTGAAGGA+TGG | + | chr1.3:75752430-75752449 | MS.gene71844:CDS | 40.0% |
| !!! | CTGTCCATTGGCTTACTTTT+TGG | + | chr1.3:75754584-75754603 | MS.gene71844:intron | 40.0% |
| AAAACAGCGACTGTTACCTG+GGG | - | chr1.3:75754010-75754029 | None:intergenic | 45.0% | |
| AAATATTCAACCGCCCTCTC+AGG | - | chr1.3:75753642-75753661 | None:intergenic | 45.0% | |
| AATATTCAACCGCCCTCTCA+GGG | - | chr1.3:75753641-75753660 | None:intergenic | 45.0% | |
| AATTTGCAGTGTGCAAAGCG+AGG | - | chr1.3:75752215-75752234 | None:intergenic | 45.0% | |
| AGAGAAAGGCTAATTGACCC+TGG | - | chr1.3:75755035-75755054 | None:intergenic | 45.0% | |
| ATTAACGAACCTATGGAGGG+CGG | + | chr1.3:75754459-75754478 | MS.gene71844:CDS | 45.0% | |
| ATTCAGTGCAAATGCAGCAC+AGG | - | chr1.3:75754175-75754194 | None:intergenic | 45.0% | |
| CAAATCCTAGATATGGGAGG+AGG | + | chr1.3:75753564-75753583 | MS.gene71844:CDS | 45.0% | |
| CACAGACCCTTAAGATAGCT+GGG | - | chr1.3:75752733-75752752 | None:intergenic | 45.0% | |
| CCTCCATAGGTTCGTTAATC+AGG | - | chr1.3:75754458-75754477 | None:intergenic | 45.0% | |
| CCTGATTAACGAACCTATGG+AGG | + | chr1.3:75754455-75754474 | MS.gene71844:CDS | 45.0% | |
| CTTGAGGTGAAACAGACACT+GGG | - | chr1.3:75753126-75753145 | None:intergenic | 45.0% | |
| GAACAACCTATTGGGACAGA+TGG | + | chr1.3:75754624-75754643 | MS.gene71844:CDS | 45.0% | |
| GATACCGGCCTTACAACTTA+GGG | + | chr1.3:75752165-75752184 | MS.gene71844:intron | 45.0% | |
| GCGTAGAAAATCCAGAGAAC+CGG | - | chr1.3:75754124-75754143 | None:intergenic | 45.0% | |
| GCTTTGCACACTGCAAATTG+TGG | + | chr1.3:75752216-75752235 | MS.gene71844:intron | 45.0% | |
| GTGGTCTAAAAGGTAGTTGG+CGG | - | chr1.3:75755178-75755197 | None:intergenic | 45.0% | |
| TAGGTTCGTTAATCAGGCGA+AGG | - | chr1.3:75754452-75754471 | None:intergenic | 45.0% | |
| TATTTACGTAGCAGTTGCCG+AGG | - | chr1.3:75753338-75753357 | None:intergenic | 45.0% | |
| TCGCCTGATTAACGAACCTA+TGG | + | chr1.3:75754452-75754471 | MS.gene71844:CDS | 45.0% | |
| TCTCACATGCCAATTTGGAG+TGG | + | chr1.3:75752679-75752698 | MS.gene71844:intron | 45.0% | |
| TGATACCGGCCTTACAACTT+AGG | + | chr1.3:75752164-75752183 | MS.gene71844:intron | 45.0% | |
| TGCCTTCAATAACCCTGAGA+GGG | + | chr1.3:75753626-75753645 | MS.gene71844:CDS | 45.0% | |
| TTACAGGGCCTGCCAAATAT+TGG | + | chr1.3:75754081-75754100 | MS.gene71844:intron | 45.0% | |
| TTAGGTCCACTTGAGGTAAC+AGG | - | chr1.3:75753965-75753984 | None:intergenic | 45.0% | |
| TTCAGTGCAAATGCAGCACA+GGG | - | chr1.3:75754174-75754193 | None:intergenic | 45.0% | |
| TTGAGGTGAAACAGACACTG+GGG | - | chr1.3:75753125-75753144 | None:intergenic | 45.0% | |
| TTGCCAAGCTCTTGTAGCAT+GGG | - | chr1.3:75754381-75754400 | None:intergenic | 45.0% | |
| TTTGAAGGATGGTACCACCT+TGG | + | chr1.3:75752441-75752460 | MS.gene71844:CDS | 45.0% | |
| TTTGCCAAGCTCTTGTAGCA+TGG | - | chr1.3:75754382-75754401 | None:intergenic | 45.0% | |
| ! | AGGGAAGGTTCTGATGTCTA+TGG | + | chr1.3:75753489-75753508 | MS.gene71844:intron | 45.0% |
| ! | GGGAAGGTTCTGATGTCTAT+GGG | + | chr1.3:75753490-75753509 | MS.gene71844:intron | 45.0% |
| ! | GGTGTGACAGTTACTGATTG+TGG | - | chr1.3:75754661-75754680 | None:intergenic | 45.0% |
| ! | TGCTGGAGATTCAGCTTGTT+CGG | - | chr1.3:75753864-75753883 | None:intergenic | 45.0% |
| !! | ATAAGCATTTGCTGTGCAGC+AGG | - | chr1.3:75752406-75752425 | None:intergenic | 45.0% |
| !! | GAGATTGATTCGGGATCATC+AGG | + | chr1.3:75754419-75754438 | MS.gene71844:CDS | 45.0% |
| !!! | AGTTTTGGTTGGTTGGTGTG+TGG | + | chr1.3:75752654-75752673 | MS.gene71844:intron | 45.0% |
| !! | ATAAATAAGTTATTATTTAA+TGG | + | chr1.3:75752130-75752149 | MS.gene71844:intron | 5.0% |
| !! | ATTAAATAATAACTTATTTA+TGG | - | chr1.3:75752131-75752150 | None:intergenic | 5.0% |
| !! | TAAAAATATTCATAAATTTA+GGG | + | chr1.3:75753833-75753852 | MS.gene71844:intron | 5.0% |
| !! | TTAAAAATATTCATAAATTT+AGG | + | chr1.3:75753832-75753851 | MS.gene71844:intron | 5.0% |
| AGATATGGGAGGAGGAAGCT+GGG | + | chr1.3:75753572-75753591 | MS.gene71844:CDS | 50.0% | |
| AGCTTCCTCCTCCCATATCT+AGG | - | chr1.3:75753572-75753591 | None:intergenic | 50.0% | |
| ATCAGTAACTGTCACACCCG+AGG | + | chr1.3:75754663-75754682 | MS.gene71844:CDS | 50.0% | |
| CAAACTTCTCTCACCTTCGC+TGG | - | chr1.3:75752941-75752960 | None:intergenic | 50.0% | |
| CACCAGCACCAATATTTGGC+AGG | - | chr1.3:75754092-75754111 | None:intergenic | 50.0% | |
| CACTGACACACGTCAAACAC+CGG | + | chr1.3:75751989-75752008 | MS.gene71844:intron | 50.0% | |
| CCACAGACCCTTAAGATAGC+TGG | - | chr1.3:75752734-75752753 | None:intergenic | 50.0% | |
| CCAGCTATCTTAAGGGTCTG+TGG | + | chr1.3:75752731-75752750 | MS.gene71844:intron | 50.0% | |
| CTGCCTTCAATAACCCTGAG+AGG | + | chr1.3:75753625-75753644 | MS.gene71844:CDS | 50.0% | |
| CTTCAATAACCCTGAGAGGG+CGG | + | chr1.3:75753629-75753648 | MS.gene71844:CDS | 50.0% | |
| GCAGCACCAGCACCAATATT+TGG | - | chr1.3:75754096-75754115 | None:intergenic | 50.0% | |
| GCTGCATCTAATCTGGTTGC+CGG | + | chr1.3:75753516-75753535 | MS.gene71844:CDS | 50.0% | |
| GCTTGAGGTGAAACAGACAC+TGG | - | chr1.3:75753127-75753146 | None:intergenic | 50.0% | |
| GTAGCAGTTGCCGAGGATAT+GGG | - | chr1.3:75753331-75753350 | None:intergenic | 50.0% | |
| GTTCGTCGAACTCATGCATG+TGG | - | chr1.3:75755197-75755216 | None:intergenic | 50.0% | |
| TAGATATGGGAGGAGGAAGC+TGG | + | chr1.3:75753571-75753590 | MS.gene71844:CDS | 50.0% | |
| TAGCTCGCAATGCTTGGAAC+TGG | - | chr1.3:75754255-75754274 | None:intergenic | 50.0% | |
| TAGGAGCAGCACTTGTCTGT+GGG | - | chr1.3:75753093-75753112 | None:intergenic | 50.0% | |
| TGAGGGAAAACCGAGTCTTG+TGG | - | chr1.3:75751525-75751544 | None:intergenic | 50.0% | |
| TGAGGTGAAACAGACACTGG+GGG | - | chr1.3:75753124-75753143 | None:intergenic | 50.0% | |
| TGCACAACCTGTGAATCCTG+AGG | + | chr1.3:75753904-75753923 | MS.gene71844:CDS | 50.0% | |
| TGTTCCCTCCAAGTTGCTAC+CGG | - | chr1.3:75753538-75753557 | None:intergenic | 50.0% | |
| TTCAAATGCTCCTCCAGCGA+AGG | + | chr1.3:75752925-75752944 | MS.gene71844:CDS | 50.0% | |
| TTCAATAGCTTGGCGCTCCT+CGG | - | chr1.3:75754683-75754702 | None:intergenic | 50.0% | |
| TTCACAGGTTGTGCACTTGC+AGG | - | chr1.3:75753899-75753918 | None:intergenic | 50.0% | |
| ! | AGGTTCTGATGTCTATGGGC+AGG | + | chr1.3:75753494-75753513 | MS.gene71844:CDS | 50.0% |
| ! | GCTGGAGATTCAGCTTGTTC+GGG | - | chr1.3:75753863-75753882 | None:intergenic | 50.0% |
| ! | GTTCCAAGCATTGCGAGCTA+TGG | + | chr1.3:75754255-75754274 | MS.gene71844:intron | 50.0% |
| ! | TCAAAGGTGTGTCCTGTGTC+CGG | - | chr1.3:75752011-75752030 | None:intergenic | 50.0% |
| !! | AATATTGGTGCTGGTGCTGC+TGG | + | chr1.3:75754096-75754115 | MS.gene71844:CDS | 50.0% |
| AACCTATGGAGGGCGGAGAA+GGG | + | chr1.3:75754466-75754485 | MS.gene71844:CDS | 55.0% | |
| ACACGTCAAACACCGGACAC+AGG | + | chr1.3:75751996-75752015 | MS.gene71844:intron | 55.0% | |
| ACCTGGGGAAAGAGGTCTAG+AGG | - | chr1.3:75753995-75754014 | None:intergenic | 55.0% | |
| ACTTCTCTCACCTTCGCTGG+AGG | - | chr1.3:75752938-75752957 | None:intergenic | 55.0% | |
| AGCATTGCGAGCTATGGTGC+AGG | + | chr1.3:75754261-75754280 | MS.gene71844:CDS | 55.0% | |
| AGCTCCTGCTCCCATATCCT+CGG | + | chr1.3:75753318-75753337 | MS.gene71844:CDS | 55.0% | |
| AGGAGCAGCACTTGTCTGTG+GGG | - | chr1.3:75753092-75753111 | None:intergenic | 55.0% | |
| AGGCGCAGCCCTAAGTTGTA+AGG | - | chr1.3:75752176-75752195 | None:intergenic | 55.0% | |
| AGGTGAAACAGACACTGGGG+GGG | - | chr1.3:75753122-75753141 | None:intergenic | 55.0% | |
| AGTAGACCCTTCACCAGACG+CGG | - | chr1.3:75752903-75752922 | None:intergenic | 55.0% | |
| CAGCAGCCATCTGTCCCAAT+AGG | - | chr1.3:75754633-75754652 | None:intergenic | 55.0% | |
| CAGCCCATGCTACAAGAGCT+TGG | + | chr1.3:75754375-75754394 | MS.gene71844:intron | 55.0% | |
| CCACTTGAGGTAACAGGAGC+AGG | - | chr1.3:75753959-75753978 | None:intergenic | 55.0% | |
| CCTGCTCCTGTTACCTCAAG+TGG | + | chr1.3:75753956-75753975 | MS.gene71844:CDS | 55.0% | |
| CGAAGTCACGCCACAAGACT+CGG | + | chr1.3:75751512-75751531 | MS.gene71844:CDS | 55.0% | |
| CGACTGTTACCTGGGGAAAG+AGG | - | chr1.3:75754003-75754022 | None:intergenic | 55.0% | |
| CGCCCTCTCAGGGTTATTGA+AGG | - | chr1.3:75753631-75753650 | None:intergenic | 55.0% | |
| CGTAGCAGTTGCCGAGGATA+TGG | - | chr1.3:75753332-75753351 | None:intergenic | 55.0% | |
| CTATTGGGACAGATGGCTGC+TGG | + | chr1.3:75754631-75754650 | MS.gene71844:CDS | 55.0% | |
| GAAGGATGGTACCACCTTGG+AGG | + | chr1.3:75752444-75752463 | MS.gene71844:CDS | 55.0% | |
| GAGGTGAAACAGACACTGGG+GGG | - | chr1.3:75753123-75753142 | None:intergenic | 55.0% | |
| GCACCATAGCTCGCAATGCT+TGG | - | chr1.3:75754261-75754280 | None:intergenic | 55.0% | |
| GCAGCCCTAAGTTGTAAGGC+CGG | - | chr1.3:75752172-75752191 | None:intergenic | 55.0% | |
| GGCCTGCCAAATATTGGTGC+TGG | + | chr1.3:75754087-75754106 | MS.gene71844:CDS | 55.0% | |
| GTAGGAGCAGCACTTGTCTG+TGG | - | chr1.3:75753094-75753113 | None:intergenic | 55.0% | |
| GTTGCCGGTAGCAACTTGGA+GGG | + | chr1.3:75753531-75753550 | MS.gene71844:CDS | 55.0% | |
| TCAAGCTCCTGCTGCAACTG+CGG | + | chr1.3:75753141-75753160 | MS.gene71844:CDS | 55.0% | |
| TCAATAGCTTGGCGCTCCTC+GGG | - | chr1.3:75754682-75754701 | None:intergenic | 55.0% | |
| TCCTCTAGACCTCTTTCCCC+AGG | + | chr1.3:75753991-75754010 | MS.gene71844:CDS | 55.0% | |
| TCTGGTTGCCGGTAGCAACT+TGG | + | chr1.3:75753527-75753546 | MS.gene71844:CDS | 55.0% | |
| TGGGCAGGCTGCATCTAATC+TGG | + | chr1.3:75753509-75753528 | MS.gene71844:CDS | 55.0% | |
| ! | GAAGGTGCAGCAACAGATGC+AGG | - | chr1.3:75753289-75753308 | None:intergenic | 55.0% |
| AGTAAGCCCGCGTCTGGTGA+AGG | + | chr1.3:75752893-75752912 | MS.gene71844:CDS | 60.0% | |
| GAACCTATGGAGGGCGGAGA+AGG | + | chr1.3:75754465-75754484 | MS.gene71844:CDS | 60.0% | |
| GACACTGGGGGGGTTGAAGT+AGG | - | chr1.3:75753112-75753131 | None:intergenic | 60.0% | |
| GAGGATATGGGAGCAGGAGC+TGG | - | chr1.3:75753319-75753338 | None:intergenic | 60.0% | |
| GCAGTTGCAGCAGGAGCTTG+AGG | - | chr1.3:75753142-75753161 | None:intergenic | 60.0% | |
| GCTGCAGCCTCAGGATTCAC+AGG | - | chr1.3:75753914-75753933 | None:intergenic | 60.0% | |
| GGGAGGAGGAAGCTGGGATA+GGG | + | chr1.3:75753578-75753597 | MS.gene71844:CDS | 60.0% | |
| GGTTGCCGGTAGCAACTTGG+AGG | + | chr1.3:75753530-75753549 | MS.gene71844:CDS | 60.0% | |
| GTAAGCCCGCGTCTGGTGAA+GGG | + | chr1.3:75752894-75752913 | MS.gene71844:CDS | 60.0% | |
| GTAGACCCTTCACCAGACGC+GGG | - | chr1.3:75752902-75752921 | None:intergenic | 60.0% | |
| GTTGCCGAGGATATGGGAGC+AGG | - | chr1.3:75753325-75753344 | None:intergenic | 60.0% | |
| GTTGTGCACTTGCAGGCGCT+CGG | - | chr1.3:75753892-75753911 | None:intergenic | 60.0% | |
| TGGGAGGAGGAAGCTGGGAT+AGG | + | chr1.3:75753577-75753596 | MS.gene71844:CDS | 60.0% | |
| TTGTGCACTTGCAGGCGCTC+GGG | - | chr1.3:75753891-75753910 | None:intergenic | 60.0% | |
| ATGGGAGCAGGAGCTGGAGC+TGG | - | chr1.3:75753313-75753332 | None:intergenic | 65.0% | |
| CACCCTTCTCCGCCCTCCAT+AGG | - | chr1.3:75754471-75754490 | None:intergenic | 65.0% | |
| GGAGCAGGCTGAGCTGCTTG+TGG | - | chr1.3:75753944-75753963 | None:intergenic | 65.0% | |
| TGGCAGAGTAAGCCCGCGTC+TGG | + | chr1.3:75752887-75752906 | MS.gene71844:intron | 65.0% | |
| TGGGAGCAGGAGCTGGAGCT+GGG | - | chr1.3:75753312-75753331 | None:intergenic | 65.0% | |
| !! | TGCTGCTGGTGCCGGTTCTC+TGG | + | chr1.3:75754110-75754129 | MS.gene71844:CDS | 65.0% |
| GCAGGAGCTGGAGCTGGGGA+AGG | - | chr1.3:75753307-75753326 | None:intergenic | 70.0% | |
| GGAGCTGCAGCTGCAGCCTC+AGG | - | chr1.3:75753923-75753942 | None:intergenic | 70.0% | |
| GGGAGCAGGAGCTGGAGCTG+GGG | - | chr1.3:75753311-75753330 | None:intergenic | 70.0% | |
| !! | CACGGTGCCGCAGTTGCAGC+AGG | - | chr1.3:75753151-75753170 | None:intergenic | 70.0% |
| !! | GGTGCTGGTGCTGCTGGTGC+CGG | + | chr1.3:75754102-75754121 | MS.gene71844:CDS | 70.0% |
| GCAGGCGCTCGGGACACTGC+TGG | - | chr1.3:75753881-75753900 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 75751468 | 75755221 | 75751468 | ID=MS.gene71844 |
| chr1.3 | mRNA | 75751468 | 75755221 | 75751468 | ID=MS.gene71844.t1;Parent=MS.gene71844 |
| chr1.3 | exon | 75751468 | 75751533 | 75751468 | ID=MS.gene71844.t1.exon1;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75751468 | 75751533 | 75751468 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| chr1.3 | exon | 75752352 | 75752513 | 75752352 | ID=MS.gene71844.t1.exon2;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75752352 | 75752513 | 75752352 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| chr1.3 | exon | 75752893 | 75752946 | 75752893 | ID=MS.gene71844.t1.exon3;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75752893 | 75752946 | 75752893 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| chr1.3 | exon | 75753088 | 75753167 | 75753088 | ID=MS.gene71844.t1.exon4;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75753088 | 75753167 | 75753088 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| chr1.3 | exon | 75753285 | 75753350 | 75753285 | ID=MS.gene71844.t1.exon5;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75753285 | 75753350 | 75753285 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| chr1.3 | exon | 75753491 | 75753668 | 75753491 | ID=MS.gene71844.t1.exon6;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75753491 | 75753668 | 75753491 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| chr1.3 | exon | 75753854 | 75754012 | 75753854 | ID=MS.gene71844.t1.exon7;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75753854 | 75754012 | 75753854 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| chr1.3 | exon | 75754087 | 75754155 | 75754087 | ID=MS.gene71844.t1.exon8;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75754087 | 75754155 | 75754087 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| chr1.3 | exon | 75754256 | 75754303 | 75754256 | ID=MS.gene71844.t1.exon9;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75754256 | 75754303 | 75754256 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| chr1.3 | exon | 75754378 | 75754487 | 75754378 | ID=MS.gene71844.t1.exon10;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75754378 | 75754487 | 75754378 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| chr1.3 | exon | 75754624 | 75754705 | 75754624 | ID=MS.gene71844.t1.exon11;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75754624 | 75754705 | 75754624 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| chr1.3 | exon | 75755102 | 75755221 | 75755102 | ID=MS.gene71844.t1.exon12;Parent=MS.gene71844.t1 |
| chr1.3 | CDS | 75755102 | 75755221 | 75755102 | ID=cds.MS.gene71844.t1;Parent=MS.gene71844.t1 |
| Gene Sequence |
| Protein sequence |
