Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71846.t1 | XP_013470197.2 | 97.2 | 757 | 21 | 0 | 1 | 757 | 1 | 757 | 0.00E+00 | 1412.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71846.t1 | F4I4B6 | 64.3 | 754 | 245 | 10 | 13 | 757 | 6 | 744 | 1.6e-252 | 873.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71846.t1 | A0A072W1S7 | 97.2 | 754 | 21 | 0 | 4 | 757 | 1 | 754 | 0.0e+00 | 1407.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006891 | MS.gene71846 | PPI |
| MS.gene56433 | MS.gene71846 | PPI |
| MS.gene71846 | MS.gene059432 | PPI |
| MS.gene71846 | MS.gene006890 | PPI |
| MS.gene71846 | MS.gene059433 | PPI |
| MS.gene067568 | MS.gene71846 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71846.t1 | MTR_1g111120 | 97.215 | 754 | 21 | 0 | 4 | 757 | 1 | 754 | 0.0 | 1516 |
| MS.gene71846.t1 | MTR_6g045363 | 88.011 | 759 | 81 | 5 | 4 | 757 | 3 | 756 | 0.0 | 1330 |
| MS.gene71846.t1 | MTR_4g005930 | 57.973 | 740 | 289 | 10 | 27 | 757 | 21 | 747 | 0.0 | 778 |
| MS.gene71846.t1 | MTR_4g083940 | 35.302 | 728 | 427 | 17 | 46 | 751 | 18 | 723 | 1.36e-115 | 367 |
| MS.gene71846.t1 | MTR_1g069620 | 25.135 | 740 | 508 | 14 | 12 | 738 | 21 | 727 | 2.88e-48 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71846.t1 | AT1G10385 | 64.295 | 759 | 237 | 11 | 13 | 757 | 6 | 744 | 0.0 | 922 |
| MS.gene71846.t1 | AT5G49830 | 56.563 | 739 | 295 | 11 | 27 | 757 | 15 | 735 | 0.0 | 752 |
| MS.gene71846.t1 | AT5G49830 | 54.416 | 770 | 294 | 12 | 27 | 757 | 15 | 766 | 0.0 | 736 |
| MS.gene71846.t1 | AT5G49830 | 56.860 | 707 | 280 | 10 | 59 | 757 | 108 | 797 | 0.0 | 725 |
| MS.gene71846.t1 | AT1G10180 | 33.287 | 718 | 426 | 16 | 46 | 742 | 18 | 703 | 5.64e-112 | 357 |
Find 148 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAATGCTCAAATGTATT+TGG | 0.147129 | 1.3:+75766198 | MS.gene71846:CDS |
| ATAATTTGTGCAGCTTTATT+TGG | 0.152391 | 1.3:+75767455 | MS.gene71846:intron |
| ATGCAGCTTGGTTAGATAAA+AGG | 0.224927 | 1.3:-75764125 | None:intergenic |
| TCTCAGCCAATAGGACATTA+AGG | 0.231322 | 1.3:-75764284 | None:intergenic |
| CATGTCTGAATCTTCGTTTC+CGG | 0.274051 | 1.3:-75764193 | None:intergenic |
| CTCGTTCATGCTGCGAGATT+TGG | 0.277623 | 1.3:-75763109 | None:intergenic |
| ATCTCCGTTCCCCGAGTTGA+TGG | 0.281148 | 1.3:-75764471 | None:intergenic |
| TTTCTGATGACCAAGACTTT+TGG | 0.282378 | 1.3:+75766958 | MS.gene71846:CDS |
| ATAACTATAAAGATGATAAC+TGG | 0.300984 | 1.3:+75768136 | MS.gene71846:CDS |
| AGTCTCGAGCCGACAACTTA+TGG | 0.301317 | 1.3:+75764594 | MS.gene71846:CDS |
| TTCTTCAGTTCACGCTGTTC+CGG | 0.308671 | 1.3:-75766085 | None:intergenic |
| CTTTAGCTGCTGCTGATGAT+TGG | 0.311358 | 1.3:+75764979 | MS.gene71846:CDS |
| ATCGATGCTGTTGCTGCTAC+AGG | 0.313596 | 1.3:+75767567 | MS.gene71846:CDS |
| TCAAATCAATATGTCAATAA+TGG | 0.316896 | 1.3:+75762945 | None:intergenic |
| CTCAAGATCTGAAATCTCTT+TGG | 0.319417 | 1.3:-75764079 | None:intergenic |
| TGCTCACAAATTCAACTCTA+TGG | 0.352516 | 1.3:+75765103 | MS.gene71846:CDS |
| TGCTCAAATGTATTTGGATA+TGG | 0.360208 | 1.3:+75766204 | MS.gene71846:CDS |
| AACCAAGCTGCATTGGTTCA+TGG | 0.360509 | 1.3:+75764135 | MS.gene71846:CDS |
| AAACTAGAATAAGAAGAAAC+AGG | 0.366793 | 1.3:-75765050 | None:intergenic |
| GACACTTGAAATCTTACAAT+TGG | 0.367328 | 1.3:+75765793 | MS.gene71846:CDS |
| TGAAACCCTTAATGTCCTAT+TGG | 0.368022 | 1.3:+75764278 | MS.gene71846:CDS |
| CAAATTCAACTCTATGGTTC+AGG | 0.372321 | 1.3:+75765109 | MS.gene71846:CDS |
| TGAATCCATGGTAGCTTTAG+AGG | 0.378246 | 1.3:+75764317 | MS.gene71846:CDS |
| TAGTCACTGTCATCTCTTAG+AGG | 0.378681 | 1.3:+75764854 | MS.gene71846:CDS |
| GCCAGTATTATTATTCCTAC+TGG | 0.384328 | 1.3:-75765021 | None:intergenic |
| CTCAGCCAATAGGACATTAA+GGG | 0.386198 | 1.3:-75764283 | None:intergenic |
| ATTGGAGAAGGAAACCATTC+AGG | 0.390426 | 1.3:-75766244 | None:intergenic |
| CTTATCACTGAGAGTGAGAT+TGG | 0.393407 | 1.3:-75763037 | None:intergenic |
| TGAAACAGGACAAACTCCTT+TGG | 0.404599 | 1.3:+75766989 | MS.gene71846:CDS |
| GGGTCCTCTCGGCCTTCAAC+AGG | 0.405904 | 1.3:+75767010 | MS.gene71846:CDS |
| CTTCTGCAGAAGCCTTCTTA+AGG | 0.407214 | 1.3:-75763633 | None:intergenic |
| AGGCGAGAATCCGTTTCTTA+AGG | 0.409182 | 1.3:-75764776 | None:intergenic |
| GAAACAGGACAAACTCCTTT+GGG | 0.418127 | 1.3:+75766990 | MS.gene71846:CDS |
| TTGCAGAAGCAGTGATACTA+TGG | 0.423718 | 1.3:+75766934 | MS.gene71846:CDS |
| ACCAGTAGGAATAATAATAC+TGG | 0.426137 | 1.3:+75765020 | MS.gene71846:CDS |
| CAACGTTTGCCCAAAAGTCT+TGG | 0.435747 | 1.3:-75766968 | None:intergenic |
| ATTTGGATATGGAGGAGAAA+GGG | 0.437364 | 1.3:+75766215 | MS.gene71846:CDS |
| GTTAGATAAAAGGTTTCTCA+TGG | 0.445154 | 1.3:-75764115 | None:intergenic |
| GTATTATTATTCCTACTGGT+TGG | 0.448239 | 1.3:-75765017 | None:intergenic |
| AAACTTTCACATAGCACAAA+AGG | 0.453898 | 1.3:+75766022 | MS.gene71846:CDS |
| GTTACCAATGCTTGATGAAA+GGG | 0.459681 | 1.3:-75762998 | None:intergenic |
| GCTCGAGACTTTGCATGTTA+CGG | 0.461531 | 1.3:-75764581 | None:intergenic |
| TACATTTGAGCATTCAAAAG+TGG | 0.463005 | 1.3:-75766193 | None:intergenic |
| TTGGATGGCCTTGCACTAGA+AGG | 0.464705 | 1.3:+75765812 | MS.gene71846:CDS |
| TTTATCTAACCAAGCTGCAT+TGG | 0.464925 | 1.3:+75764128 | MS.gene71846:CDS |
| TTTGGAAGCAACGTAGGCAC+TGG | 0.466119 | 1.3:-75763091 | None:intergenic |
| TGAACTCATCTACCTGTTGA+AGG | 0.470405 | 1.3:-75767022 | None:intergenic |
| GTAAAGCTTACCGGAGTGGC+AGG | 0.475314 | 1.3:+75766852 | MS.gene71846:CDS |
| ATCTGATACTGCTTGTGAAA+TGG | 0.475631 | 1.3:-75764664 | None:intergenic |
| GAACTGATCTTCACAGAAGA+TGG | 0.475760 | 1.3:+75766166 | MS.gene71846:CDS |
| CTAATTACTCTTCCTTCATA+CGG | 0.482371 | 1.3:+75763677 | MS.gene71846:CDS |
| TTATCTTGTTGACCTTAAGA+AGG | 0.482425 | 1.3:+75763621 | MS.gene71846:CDS |
| TTTCGCTTCTCCTTAAGAAA+CGG | 0.483756 | 1.3:+75764766 | MS.gene71846:CDS |
| GATTGTTTCTGCTAGTTGAT+CGG | 0.484105 | 1.3:-75764442 | None:intergenic |
| CTCGCCTCGATAGCTGCATC+AGG | 0.488135 | 1.3:+75764792 | MS.gene71846:CDS |
| CTTGAAATCTTACAATTGGA+TGG | 0.490444 | 1.3:+75765797 | MS.gene71846:CDS |
| CTAATTCCTCCATAAGTTGT+CGG | 0.492159 | 1.3:-75764603 | None:intergenic |
| CTAAGAGATGACAGTGACTA+AGG | 0.496173 | 1.3:-75764851 | None:intergenic |
| TCACTCTCAGTGATAAGCTC+CGG | 0.496299 | 1.3:+75763043 | MS.gene71846:CDS |
| CAAAGAGATTTCAGATCTTG+AGG | 0.497575 | 1.3:+75764080 | MS.gene71846:CDS |
| ATACTTCTGAGCTAGTAACT+TGG | 0.498432 | 1.3:+75764721 | MS.gene71846:CDS |
| TTTGGATATGGAGGAGAAAG+GGG | 0.499912 | 1.3:+75766216 | MS.gene71846:CDS |
| CTACAGGGCTAGATCCCAAC+AGG | 0.500114 | 1.3:+75767583 | MS.gene71846:CDS |
| TTGGTTCATGGTTTAGCAGA+AGG | 0.500660 | 1.3:+75764147 | MS.gene71846:CDS |
| TATTTGGATATGGAGGAGAA+AGG | 0.501650 | 1.3:+75766214 | MS.gene71846:CDS |
| TCAACAAACCACTCATCCTC+TGG | 0.505796 | 1.3:-75768103 | None:intergenic |
| CCGTTCCCCGAGTTGATGGT+TGG | 0.508728 | 1.3:-75764467 | None:intergenic |
| ACGAGATAAGTAACGACCTT+GGG | 0.509314 | 1.3:-75767505 | None:intergenic |
| TCCTTCCTCTAAAGCTACCA+TGG | 0.511148 | 1.3:-75764322 | None:intergenic |
| ACATTTGAGCATTCAAAAGT+GGG | 0.512082 | 1.3:-75766192 | None:intergenic |
| CACTCTCAGTGATAAGCTCC+GGG | 0.515701 | 1.3:+75763044 | MS.gene71846:CDS |
| AGGGTGTCAACTCGGTTCCT+TGG | 0.517258 | 1.3:+75764167 | MS.gene71846:CDS |
| CATTGCATCAGATGTATTTG+TGG | 0.517401 | 1.3:+75766875 | MS.gene71846:CDS |
| CTTCTGTGAAGATCAGTTCA+AGG | 0.518612 | 1.3:-75766162 | None:intergenic |
| TGAGCACTGATTGAAAGCTT+AGG | 0.519082 | 1.3:-75765086 | None:intergenic |
| TTCTCAGTGACAGCTGAACC+TGG | 0.521769 | 1.3:-75765884 | None:intergenic |
| ATCAGATGTATTTGTGGGAA+GGG | 0.529411 | 1.3:+75766881 | MS.gene71846:CDS |
| CTTGATGAAAGGGATCCTCT+TGG | 0.531833 | 1.3:-75762988 | None:intergenic |
| ATGTATTTGTGGGAAGGGAA+AGG | 0.531950 | 1.3:+75766886 | MS.gene71846:CDS |
| CAATCTGCCAACCATCAACT+CGG | 0.533197 | 1.3:+75764460 | MS.gene71846:CDS |
| AAAGAGATTTCAGATCTTGA+GGG | 0.537696 | 1.3:+75764081 | MS.gene71846:CDS |
| ATTGCATCAGATGTATTTGT+GGG | 0.540297 | 1.3:+75766876 | MS.gene71846:CDS |
| CACTGATTGAAAGCTTAGGC+TGG | 0.540514 | 1.3:-75765082 | None:intergenic |
| TTCAGTTCACGCTGTTCCGG+AGG | 0.543328 | 1.3:-75766082 | None:intergenic |
| ATCAGATAAACAAAGACCTC+CGG | 0.544501 | 1.3:+75766066 | MS.gene71846:CDS |
| TTAAGTGCTTGCTCAACAAA+TGG | 0.544583 | 1.3:-75764921 | None:intergenic |
| TACTTCTGAGCTAGTAACTT+GGG | 0.545379 | 1.3:+75764722 | MS.gene71846:CDS |
| GGATCCCTTTCATCAAGCAT+TGG | 0.546195 | 1.3:+75762994 | MS.gene71846:CDS |
| TGGTTCATGGTTTAGCAGAA+GGG | 0.546446 | 1.3:+75764148 | MS.gene71846:CDS |
| TATATATGTGTGTACCTGTT+GGG | 0.549100 | 1.3:-75767597 | None:intergenic |
| GACGAGATAAGTAACGACCT+TGG | 0.550631 | 1.3:-75767506 | None:intergenic |
| CATCAGATGTATTTGTGGGA+AGG | 0.550806 | 1.3:+75766880 | MS.gene71846:CDS |
| CAACTCGGTTCCTTGGTGAC+CGG | 0.553889 | 1.3:+75764174 | MS.gene71846:CDS |
| AGTTACCAATGCTTGATGAA+AGG | 0.554812 | 1.3:-75762999 | None:intergenic |
| AACCATGAACCAATGCAGCT+TGG | 0.558664 | 1.3:-75764137 | None:intergenic |
| TGACATAGAAATTAAACACT+TGG | 0.558914 | 1.3:-75765841 | None:intergenic |
| AACGTAGGCACTGGGATCAA+AGG | 0.559903 | 1.3:-75763082 | None:intergenic |
| AATCTGCCAACCATCAACTC+GGG | 0.563979 | 1.3:+75764461 | MS.gene71846:CDS |
| CAAACTCCTTTGGGTCCTCT+CGG | 0.564635 | 1.3:+75766999 | MS.gene71846:CDS |
| TGTCATCTCTTAGAGGCTAG+TGG | 0.567934 | 1.3:+75764861 | MS.gene71846:CDS |
| ACTAGCTCAGAAGTATATGC+AGG | 0.571093 | 1.3:-75764714 | None:intergenic |
| ACTGAGAATCTAGAAAGCAC+AGG | 0.575033 | 1.3:+75765899 | MS.gene71846:CDS |
| GATCTGTACTCACCGTATGA+AGG | 0.576546 | 1.3:-75763689 | None:intergenic |
| GAAAAGAGTGGATGAATCCA+TGG | 0.577713 | 1.3:+75764305 | MS.gene71846:CDS |
| GTGTCTTGCCAGAGGATGAG+TGG | 0.578329 | 1.3:+75768095 | MS.gene71846:intron |
| TCAGACGATCAACTTCGCGC+TGG | 0.582613 | 1.3:-75766114 | None:intergenic |
| TTATGCTCGGGCTGATCAAG+TGG | 0.586669 | 1.3:-75768200 | None:intergenic |
| GATCCTCTTGGAGTCGTGAA+AGG | 0.587148 | 1.3:-75762976 | None:intergenic |
| CTGTTGATAAATGCAATGCC+AGG | 0.589521 | 1.3:+75765866 | MS.gene71846:CDS |
| TTGGAAGCAACGTAGGCACT+GGG | 0.590892 | 1.3:-75763090 | None:intergenic |
| CCAACCATCAACTCGGGGAA+CGG | 0.591579 | 1.3:+75764467 | MS.gene71846:CDS |
| ATCGTCCTCTACATTGTCAA+AGG | 0.593246 | 1.3:-75768167 | None:intergenic |
| ACCTCCTGATGCAGCTATCG+AGG | 0.595434 | 1.3:-75764796 | None:intergenic |
| TGATGCAATGCCTGCCACTC+CGG | 0.596969 | 1.3:-75766862 | None:intergenic |
| TTCTGTGAAGATCAGTTCAA+GGG | 0.600400 | 1.3:-75766161 | None:intergenic |
| TCGATGCTGTTGCTGCTACA+GGG | 0.603134 | 1.3:+75767568 | MS.gene71846:CDS |
| TCCATGGTAGCTTTAGAGGA+AGG | 0.604289 | 1.3:+75764321 | MS.gene71846:CDS |
| TCTCTTAGAGGCTAGTGGAA+TGG | 0.605218 | 1.3:+75764866 | MS.gene71846:CDS |
| CTAAAATGTTTAAGTAACAC+AGG | 0.606071 | 1.3:-75764897 | None:intergenic |
| CGGAAACGAAGATTCAGACA+TGG | 0.607458 | 1.3:+75764194 | MS.gene71846:CDS |
| TCAAATGTATTTGGATATGG+AGG | 0.609186 | 1.3:+75766207 | MS.gene71846:CDS |
| ATCTCGCAGCATGAACGAGA+AGG | 0.613434 | 1.3:+75763113 | MS.gene71846:CDS |
| AGAAAGGGGAGATACCTGAA+TGG | 0.616037 | 1.3:+75766230 | MS.gene71846:CDS |
| AACTAGAATAAGAAGAAACA+GGG | 0.616173 | 1.3:-75765049 | None:intergenic |
| GGTGAAGTCCTTCTAGTGCA+AGG | 0.617281 | 1.3:-75765820 | None:intergenic |
| TAACTATAAAGATGATAACT+GGG | 0.625636 | 1.3:+75768137 | MS.gene71846:CDS |
| TCACCTTTCACGACTCCAAG+AGG | 0.627948 | 1.3:+75762973 | MS.gene71846:CDS |
| GTCCTCTACATTGTCAAAGG+CGG | 0.628820 | 1.3:-75768164 | None:intergenic |
| GCGAGATTTGGAAGCAACGT+AGG | 0.634328 | 1.3:-75763097 | None:intergenic |
| TTGCTTATGCACCAACCAGT+AGG | 0.635236 | 1.3:+75765006 | MS.gene71846:CDS |
| AATAAGAAGAAACAGGGCGT+AGG | 0.640883 | 1.3:-75765043 | None:intergenic |
| TTAGCAGAAGGGTGTCAACT+CGG | 0.642019 | 1.3:+75764159 | MS.gene71846:CDS |
| GCCTCGATAGCTGCATCAGG+AGG | 0.642479 | 1.3:+75764795 | MS.gene71846:CDS |
| ATCTTCGTTTCCGGTCACCA+AGG | 0.643279 | 1.3:-75764184 | None:intergenic |
| GGGAACGGAGATTCGATCAA+CGG | 0.647088 | 1.3:+75764482 | MS.gene71846:CDS |
| ATGGCTAAAGAAATTAAACA+AGG | 0.647355 | 1.3:+75764351 | MS.gene71846:CDS |
| AGCCGCCTTTGACAATGTAG+AGG | 0.649326 | 1.3:+75768162 | MS.gene71846:CDS |
| CTGAGAATCTAGAAAGCACA+GGG | 0.650643 | 1.3:+75765900 | MS.gene71846:CDS |
| TATGCTCGGGCTGATCAAGT+GGG | 0.651352 | 1.3:-75768199 | None:intergenic |
| CTCGAGCCGACAACTTATGG+AGG | 0.651664 | 1.3:+75764597 | MS.gene71846:CDS |
| CCTATTGGCTGAGAAAAGAG+TGG | 0.653524 | 1.3:+75764293 | MS.gene71846:CDS |
| TGGCTAAAGAAATTAAACAA+GGG | 0.659812 | 1.3:+75764352 | MS.gene71846:CDS |
| ATCTGCCAACCATCAACTCG+GGG | 0.662351 | 1.3:+75764462 | MS.gene71846:CDS |
| AGAAGTAGCGTATGAGCACG+AGG | 0.667862 | 1.3:-75764534 | None:intergenic |
| TGAAGGCCGAGAGGACCCAA+AGG | 0.674552 | 1.3:-75767005 | None:intergenic |
| TCTACCTGTTGAAGGCCGAG+AGG | 0.701377 | 1.3:-75767014 | None:intergenic |
| GAATGACAGTGTCTTGCCAG+AGG | 0.707165 | 1.3:+75768087 | MS.gene71846:intron |
| GAAAGTTTGATTACAGCACG+CGG | 0.737041 | 1.3:-75766007 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATCTATTATTATTATCA+TGG | - | chr1.3:75765235-75765254 | None:intergenic | 10.0% |
| !! | ATATCTATTATTATTATCAT+GGG | - | chr1.3:75765234-75765253 | None:intergenic | 10.0% |
| !!! | TTTCTGATTATAATTTTAAT+TGG | - | chr1.3:75767933-75767952 | None:intergenic | 10.0% |
| !! | AAAATTATGATTACGAAATT+TGG | + | chr1.3:75763871-75763890 | MS.gene71846:intron | 15.0% |
| !! | ATATATCAAAAACAGAAAAA+TGG | + | chr1.3:75764241-75764260 | MS.gene71846:CDS | 15.0% |
| !! | TATTAAAAACATTATTGGAA+GGG | + | chr1.3:75767542-75767561 | MS.gene71846:CDS | 15.0% |
| !!! | AAAAGTATTTGGATATATTT+TGG | + | chr1.3:75767272-75767291 | MS.gene71846:intron | 15.0% |
| !!! | ATCTTTCTTTTTATACTATT+AGG | + | chr1.3:75765552-75765571 | MS.gene71846:intron | 15.0% |
| !!! | GAAAAAATTGTAAAAGTATT+TGG | + | chr1.3:75767261-75767280 | MS.gene71846:intron | 15.0% |
| !!! | TGAATATATGTTTTTTTGAA+TGG | + | chr1.3:75766592-75766611 | MS.gene71846:intron | 15.0% |
| !! | AAATTATTTAATAGTGAGTC+TGG | - | chr1.3:75767442-75767461 | None:intergenic | 20.0% |
| !! | AAGATATTCATATAAGTGAA+AGG | + | chr1.3:75763363-75763382 | MS.gene71846:intron | 20.0% |
| !! | AGAAAGCAATATAAAAACAA+TGG | + | chr1.3:75767899-75767918 | MS.gene71846:intron | 20.0% |
| !! | AGGAATAGAATCATATATTA+GGG | + | chr1.3:75765572-75765591 | MS.gene71846:intron | 20.0% |
| !! | AGTTGAATTTAGAAACTTAA+TGG | + | chr1.3:75767123-75767142 | MS.gene71846:intron | 20.0% |
| !! | ATAACTATAAAGATGATAAC+TGG | + | chr1.3:75768136-75768155 | MS.gene71846:CDS | 20.0% |
| !! | ATATATGATGCATAAGAATT+TGG | - | chr1.3:75763802-75763821 | None:intergenic | 20.0% |
| !! | CAAGCTATTAAAAACATTAT+TGG | + | chr1.3:75767537-75767556 | MS.gene71846:CDS | 20.0% |
| !! | CTATTAAAAACATTATTGGA+AGG | + | chr1.3:75767541-75767560 | MS.gene71846:CDS | 20.0% |
| !! | TAACTATAAAGATGATAACT+GGG | + | chr1.3:75768137-75768156 | MS.gene71846:CDS | 20.0% |
| !! | TAGGAATAGAATCATATATT+AGG | + | chr1.3:75765571-75765590 | MS.gene71846:intron | 20.0% |
| !! | TCAATATTTGCATTGTTTAT+AGG | + | chr1.3:75763579-75763598 | MS.gene71846:intron | 20.0% |
| !!! | ATTGTTTTTATATTGCTTTC+TGG | - | chr1.3:75767900-75767919 | None:intergenic | 20.0% |
| !!! | CATTTTCTATATTATTGTTC+AGG | + | chr1.3:75766821-75766840 | MS.gene71846:intron | 20.0% |
| !!! | CTATTTTGTAAAATTATTGC+AGG | + | chr1.3:75765362-75765381 | MS.gene71846:intron | 20.0% |
| !!! | TACTTTAATTCTCTAAAGTA+TGG | - | chr1.3:75763413-75763432 | None:intergenic | 20.0% |
| !!! | TTAAGGATTTTATTCTTTGT+TGG | - | chr1.3:75765698-75765717 | None:intergenic | 20.0% |
| !!! | TTGAGTTTTTGATAAATAAC+TGG | + | chr1.3:75767181-75767200 | MS.gene71846:intron | 20.0% |
| !!! | TTTGTGATTTAAAGCAATTT+TGG | + | chr1.3:75767057-75767076 | MS.gene71846:intron | 20.0% |
| ! | AAAACAGAAAAATGGCTAAT+AGG | + | chr1.3:75764249-75764268 | MS.gene71846:CDS | 25.0% |
| ! | AAACTAGAATAAGAAGAAAC+AGG | - | chr1.3:75765053-75765072 | None:intergenic | 25.0% |
| ! | AACTAGAATAAGAAGAAACA+GGG | - | chr1.3:75765052-75765071 | None:intergenic | 25.0% |
| ! | AGAGAATCAGAAATTCAATT+AGG | + | chr1.3:75765655-75765674 | MS.gene71846:intron | 25.0% |
| ! | ATATTCACACAAGAAAGAAA+AGG | - | chr1.3:75765749-75765768 | None:intergenic | 25.0% |
| ! | ATGGCTAAAGAAATTAAACA+AGG | + | chr1.3:75764351-75764370 | MS.gene71846:CDS | 25.0% |
| ! | ATGTCACAACTTGATAAAAA+GGG | + | chr1.3:75763211-75763230 | MS.gene71846:intron | 25.0% |
| ! | CACTTATATGAATATCTTCT+AGG | - | chr1.3:75763361-75763380 | None:intergenic | 25.0% |
| ! | CATTACATAAAAATGGAAAG+GGG | - | chr1.3:75765726-75765745 | None:intergenic | 25.0% |
| ! | CTAAAATGTTTAAGTAACAC+AGG | - | chr1.3:75764900-75764919 | None:intergenic | 25.0% |
| ! | GATACATTCAATAACTTCTA+TGG | - | chr1.3:75766710-75766729 | None:intergenic | 25.0% |
| ! | GCATTACATAAAAATGGAAA+GGG | - | chr1.3:75765727-75765746 | None:intergenic | 25.0% |
| ! | TAATAGTTTACTCCTTCATA+GGG | + | chr1.3:75766642-75766661 | MS.gene71846:intron | 25.0% |
| ! | TATAGCTTAAAATAGCATTG+TGG | + | chr1.3:75767616-75767635 | MS.gene71846:intron | 25.0% |
| ! | TCAGATTAATTCAATGAGTT+AGG | + | chr1.3:75763249-75763268 | MS.gene71846:intron | 25.0% |
| ! | TCTTATGCATCATATATGAA+GGG | + | chr1.3:75763805-75763824 | MS.gene71846:intron | 25.0% |
| ! | TCTTTCTTGTGTGAATATAT+AGG | + | chr1.3:75765751-75765770 | MS.gene71846:intron | 25.0% |
| ! | TGACATAGAAATTAAACACT+TGG | - | chr1.3:75765844-75765863 | None:intergenic | 25.0% |
| ! | TGATCAAATGAAAGCAAAAA+GGG | - | chr1.3:75763535-75763554 | None:intergenic | 25.0% |
| ! | TGGCTAAAGAAATTAAACAA+GGG | + | chr1.3:75764352-75764371 | MS.gene71846:CDS | 25.0% |
| ! | TGTTTGTTTACCTGAAAAAT+TGG | - | chr1.3:75766265-75766284 | None:intergenic | 25.0% |
| ! | TTAATAGTTTACTCCTTCAT+AGG | + | chr1.3:75766641-75766660 | MS.gene71846:intron | 25.0% |
| ! | TTATCGAACAAACATTAATC+AGG | + | chr1.3:75767828-75767847 | MS.gene71846:intron | 25.0% |
| ! | TTCAAAGAATACAACATGTT+TGG | - | chr1.3:75767976-75767995 | None:intergenic | 25.0% |
| ! | TTCTTATGCATCATATATGA+AGG | + | chr1.3:75763804-75763823 | MS.gene71846:intron | 25.0% |
| ! | TTGATCAAATGAAAGCAAAA+AGG | - | chr1.3:75763536-75763555 | None:intergenic | 25.0% |
| ! | TTTGAATGCTCAAATGTATT+TGG | + | chr1.3:75766198-75766217 | MS.gene71846:CDS | 25.0% |
| !! | CAACATCATTCACATTTTTA+AGG | - | chr1.3:75763309-75763328 | None:intergenic | 25.0% |
| !! | TTTTGATAAATAACTGGACA+TGG | + | chr1.3:75767187-75767206 | MS.gene71846:intron | 25.0% |
| !! | TTTTTGCTTTCATTTGATCA+AGG | + | chr1.3:75763535-75763554 | MS.gene71846:intron | 25.0% |
| !!! | AAGAATTTTGTTTCTGTTTG+AGG | - | chr1.3:75767339-75767358 | None:intergenic | 25.0% |
| !!! | AAGCTTGAGTATTGAAAATA+AGG | + | chr1.3:75767091-75767110 | MS.gene71846:intron | 25.0% |
| !!! | AATACTGAGGTTTTAAGTAA+AGG | - | chr1.3:75764016-75764035 | None:intergenic | 25.0% |
| !!! | ATAATTTGTGCAGCTTTATT+TGG | + | chr1.3:75767455-75767474 | MS.gene71846:intron | 25.0% |
| !!! | ATCATTCACATTTTTAAGGA+CGG | - | chr1.3:75763305-75763324 | None:intergenic | 25.0% |
| !!! | GAAAAGGCATTACATAAAAA+TGG | - | chr1.3:75765733-75765752 | None:intergenic | 25.0% |
| !!! | TGAATGATGTTGTGTTTTTA+AGG | + | chr1.3:75763317-75763336 | MS.gene71846:intron | 25.0% |
| !!! | TTTTTCAGGTAAACAAACAA+AGG | + | chr1.3:75766266-75766285 | MS.gene71846:intron | 25.0% |
| AAACTTTCACATAGCACAAA+AGG | + | chr1.3:75766022-75766041 | MS.gene71846:CDS | 30.0% | |
| AAAGAGATTTCAGATCTTGA+GGG | + | chr1.3:75764081-75764100 | MS.gene71846:CDS | 30.0% | |
| AAATCCTTATTATCACTAGG+TGG | + | chr1.3:75765448-75765467 | MS.gene71846:intron | 30.0% | |
| AATCCTTATTATCACTAGGT+GGG | + | chr1.3:75765449-75765468 | MS.gene71846:intron | 30.0% | |
| ACAGACCAAAATTCACAAAA+AGG | - | chr1.3:75763843-75763862 | None:intergenic | 30.0% | |
| ACATTCAATAACTTCTATGG+AGG | - | chr1.3:75766707-75766726 | None:intergenic | 30.0% | |
| ACATTTGAGCATTCAAAAGT+GGG | - | chr1.3:75766195-75766214 | None:intergenic | 30.0% | |
| ACCAAATCCTTATTATCACT+AGG | + | chr1.3:75765445-75765464 | MS.gene71846:intron | 30.0% | |
| ACCAGTAGGAATAATAATAC+TGG | + | chr1.3:75765020-75765039 | MS.gene71846:CDS | 30.0% | |
| ACCTAGTGATAATAAGGATT+TGG | - | chr1.3:75765449-75765468 | None:intergenic | 30.0% | |
| ACTACTATCACTATGCTTAT+AGG | - | chr1.3:75766373-75766392 | None:intergenic | 30.0% | |
| ATTGCATCAGATGTATTTGT+GGG | + | chr1.3:75766876-75766895 | MS.gene71846:CDS | 30.0% | |
| CAAAATTCACAAAAAGGCAA+TGG | - | chr1.3:75763837-75763856 | None:intergenic | 30.0% | |
| CAATGTGTTAGACAATGTTA+TGG | + | chr1.3:75763498-75763517 | MS.gene71846:intron | 30.0% | |
| CATGTCACAACTTGATAAAA+AGG | + | chr1.3:75763210-75763229 | MS.gene71846:intron | 30.0% | |
| CTAATTACTCTTCCTTCATA+CGG | + | chr1.3:75763677-75763696 | MS.gene71846:CDS | 30.0% | |
| CTTGAAATCTTACAATTGGA+TGG | + | chr1.3:75765797-75765816 | MS.gene71846:CDS | 30.0% | |
| GACACTTGAAATCTTACAAT+TGG | + | chr1.3:75765793-75765812 | MS.gene71846:CDS | 30.0% | |
| GGCATTACATAAAAATGGAA+AGG | - | chr1.3:75765728-75765747 | None:intergenic | 30.0% | |
| GTATTATTATTCCTACTGGT+TGG | - | chr1.3:75765020-75765039 | None:intergenic | 30.0% | |
| GTGAAATGGTTGAAAAAACA+AGG | - | chr1.3:75764653-75764672 | None:intergenic | 30.0% | |
| GTTAGATAAAAGGTTTCTCA+TGG | - | chr1.3:75764118-75764137 | None:intergenic | 30.0% | |
| GTTTCAAATAGCAAATACTG+AGG | - | chr1.3:75764029-75764048 | None:intergenic | 30.0% | |
| TACATTTGAGCATTCAAAAG+TGG | - | chr1.3:75766196-75766215 | None:intergenic | 30.0% | |
| TAGAAACAACTTTATGCAAG+AGG | - | chr1.3:75763722-75763741 | None:intergenic | 30.0% | |
| TATATATGTGTGTACCTGTT+GGG | - | chr1.3:75767600-75767619 | None:intergenic | 30.0% | |
| TCAAATGTATTTGGATATGG+AGG | + | chr1.3:75766207-75766226 | MS.gene71846:CDS | 30.0% | |
| TGCATAAGAATTTGGAAATG+TGG | - | chr1.3:75763794-75763813 | None:intergenic | 30.0% | |
| TGCTCAAATGTATTTGGATA+TGG | + | chr1.3:75766204-75766223 | MS.gene71846:CDS | 30.0% | |
| TTATCTTGTTGACCTTAAGA+AGG | + | chr1.3:75763621-75763640 | MS.gene71846:CDS | 30.0% | |
| TTGAATGTATCCACATAAGT+TGG | + | chr1.3:75766719-75766738 | MS.gene71846:intron | 30.0% | |
| TTTAATGTAACTGCATGTGT+TGG | - | chr1.3:75765336-75765355 | None:intergenic | 30.0% | |
| TTTACCTGAAAAATTGGAGA+AGG | - | chr1.3:75766259-75766278 | None:intergenic | 30.0% | |
| TTTAGAGGAAGGAGAAAAAA+TGG | + | chr1.3:75764332-75764351 | MS.gene71846:CDS | 30.0% | |
| TTTGAATGTATTGCATGCAT+TGG | + | chr1.3:75766478-75766497 | MS.gene71846:intron | 30.0% | |
| ! | AAGCTTTCAATTTGAAGTGA+CGG | - | chr1.3:75765293-75765312 | None:intergenic | 30.0% |
| ! | ATTAGTGTTGAAAAATCTGG+GGG | + | chr1.3:75764506-75764525 | MS.gene71846:CDS | 30.0% |
| ! | CATTAGTGTTGAAAAATCTG+GGG | + | chr1.3:75764505-75764524 | MS.gene71846:CDS | 30.0% |
| ! | CATTGCCTTTTTGTGAATTT+TGG | + | chr1.3:75763835-75763854 | MS.gene71846:intron | 30.0% |
| ! | GCATTAGTGTTGAAAAATCT+GGG | + | chr1.3:75764504-75764523 | MS.gene71846:CDS | 30.0% |
| ! | TATTATTATCATGGGCTACT+TGG | - | chr1.3:75765226-75765245 | None:intergenic | 30.0% |
| ! | TTTTGAATGGCAAATGCTAT+TGG | + | chr1.3:75766605-75766624 | MS.gene71846:intron | 30.0% |
| ! | TTTTTGTCTGTGTTCAGTAA+TGG | - | chr1.3:75764418-75764437 | None:intergenic | 30.0% |
| !! | ACTTGAGACAATAACTTGTT+CGG | + | chr1.3:75767734-75767753 | MS.gene71846:intron | 30.0% |
| !! | ATTCAATTAGGTTGAAAGTG+AGG | + | chr1.3:75765667-75765686 | MS.gene71846:intron | 30.0% |
| !! | ATTGCATAGGGAAAAGTATT+TGG | - | chr1.3:75766684-75766703 | None:intergenic | 30.0% |
| !! | CTTTTTATCAAGTTGTGACA+TGG | - | chr1.3:75763212-75763231 | None:intergenic | 30.0% |
| AAGGAGAAGCGAAAAAGTTT+CGG | - | chr1.3:75764760-75764779 | None:intergenic | 35.0% | |
| AAGTGTAGAGCTATAACCAA+AGG | - | chr1.3:75766305-75766324 | None:intergenic | 35.0% | |
| ACACATTGCATAAGAAGACA+TGG | - | chr1.3:75763486-75763505 | None:intergenic | 35.0% | |
| AGTTACCAATGCTTGATGAA+AGG | - | chr1.3:75763002-75763021 | None:intergenic | 35.0% | |
| ATACTTCTGAGCTAGTAACT+TGG | + | chr1.3:75764721-75764740 | MS.gene71846:CDS | 35.0% | |
| ATCAGATAAACAAAGACCTC+CGG | + | chr1.3:75766066-75766085 | MS.gene71846:CDS | 35.0% | |
| ATCAGATGTATTTGTGGGAA+GGG | + | chr1.3:75766881-75766900 | MS.gene71846:CDS | 35.0% | |
| ATCTGATACTGCTTGTGAAA+TGG | - | chr1.3:75764667-75764686 | None:intergenic | 35.0% | |
| ATGAGTTAGGTAAGATCACA+CGG | + | chr1.3:75763262-75763281 | MS.gene71846:intron | 35.0% | |
| ATGCAGCTTGGTTAGATAAA+AGG | - | chr1.3:75764128-75764147 | None:intergenic | 35.0% | |
| ATGTCTTCGATATGAAGTCT+CGG | + | chr1.3:75766774-75766793 | MS.gene71846:intron | 35.0% | |
| ATTTGGATATGGAGGAGAAA+GGG | + | chr1.3:75766215-75766234 | MS.gene71846:CDS | 35.0% | |
| CAAAGAGATTTCAGATCTTG+AGG | + | chr1.3:75764080-75764099 | MS.gene71846:CDS | 35.0% | |
| CAAATTCAACTCTATGGTTC+AGG | + | chr1.3:75765109-75765128 | MS.gene71846:CDS | 35.0% | |
| CACATTGCATAAGAAGACAT+GGG | - | chr1.3:75763485-75763504 | None:intergenic | 35.0% | |
| CATTGCATCAGATGTATTTG+TGG | + | chr1.3:75766875-75766894 | MS.gene71846:CDS | 35.0% | |
| CTAATTCCTCCATAAGTTGT+CGG | - | chr1.3:75764606-75764625 | None:intergenic | 35.0% | |
| CTATATATGTGTGTACCTGT+TGG | - | chr1.3:75767601-75767620 | None:intergenic | 35.0% | |
| GAAGCAGTAGAAAACAAACA+TGG | - | chr1.3:75768045-75768064 | None:intergenic | 35.0% | |
| GCCAGTATTATTATTCCTAC+TGG | - | chr1.3:75765024-75765043 | None:intergenic | 35.0% | |
| GCTTAAAATAGCATTGTGGA+TGG | + | chr1.3:75767620-75767639 | MS.gene71846:intron | 35.0% | |
| GTAGTATAACCTATGTGACA+TGG | + | chr1.3:75766388-75766407 | MS.gene71846:intron | 35.0% | |
| GTTACCAATGCTTGATGAAA+GGG | - | chr1.3:75763001-75763020 | None:intergenic | 35.0% | |
| TAAAGTCATAAGGACAAGGA+GGG | + | chr1.3:75767859-75767878 | MS.gene71846:intron | 35.0% | |
| TACTTCTGAGCTAGTAACTT+GGG | + | chr1.3:75764722-75764741 | MS.gene71846:CDS | 35.0% | |
| TATTTGGATATGGAGGAGAA+AGG | + | chr1.3:75766214-75766233 | MS.gene71846:CDS | 35.0% | |
| TGAAACCCTTAATGTCCTAT+TGG | + | chr1.3:75764278-75764297 | MS.gene71846:CDS | 35.0% | |
| TGCTCACAAATTCAACTCTA+TGG | + | chr1.3:75765103-75765122 | MS.gene71846:CDS | 35.0% | |
| TTAAGTGCTTGCTCAACAAA+TGG | - | chr1.3:75764924-75764943 | None:intergenic | 35.0% | |
| TTCTGTGAAGATCAGTTCAA+GGG | - | chr1.3:75766164-75766183 | None:intergenic | 35.0% | |
| TTTATCTAACCAAGCTGCAT+TGG | + | chr1.3:75764128-75764147 | MS.gene71846:CDS | 35.0% | |
| TTTCGCTTCTCCTTAAGAAA+CGG | + | chr1.3:75764766-75764785 | MS.gene71846:CDS | 35.0% | |
| ! | CATCTAAAGTCATAAGGACA+AGG | + | chr1.3:75767855-75767874 | MS.gene71846:intron | 35.0% |
| ! | CTCAAGATCTGAAATCTCTT+TGG | - | chr1.3:75764082-75764101 | None:intergenic | 35.0% |
| ! | GAGCTTTTTGTAAAGCTTAC+CGG | + | chr1.3:75766843-75766862 | MS.gene71846:CDS | 35.0% |
| ! | GATTCTTTGACAGTTTTTGC+TGG | + | chr1.3:75764684-75764703 | MS.gene71846:CDS | 35.0% |
| ! | GGCATTAGTGTTGAAAAATC+TGG | + | chr1.3:75764503-75764522 | MS.gene71846:CDS | 35.0% |
| ! | GGTCATCATCTAAAGTCATA+AGG | + | chr1.3:75767849-75767868 | MS.gene71846:intron | 35.0% |
| ! | GTGATGATATTTTCATCCCA+AGG | + | chr1.3:75767489-75767508 | MS.gene71846:CDS | 35.0% |
| ! | GTTTCCTTCTCCAATTTTTC+AGG | + | chr1.3:75766252-75766271 | MS.gene71846:CDS | 35.0% |
| ! | TTCTGATGACCAAGACTTTT+GGG | + | chr1.3:75766959-75766978 | MS.gene71846:CDS | 35.0% |
| ! | TTTCTGATGACCAAGACTTT+TGG | + | chr1.3:75766958-75766977 | MS.gene71846:CDS | 35.0% |
| ! | TTTGCTATGTTCTAACAGCA+TGG | + | chr1.3:75766329-75766348 | MS.gene71846:intron | 35.0% |
| !! | AGGTAGAACTTTTGAAAACC+CGG | - | chr1.3:75763065-75763084 | None:intergenic | 35.0% |
| !! | AGTGAGTCTGGAATTGTTTT+TGG | - | chr1.3:75767430-75767449 | None:intergenic | 35.0% |
| !! | GAAAAGTATTTGGAGGTCTT+GGG | - | chr1.3:75766674-75766693 | None:intergenic | 35.0% |
| !! | GATTGTTTCTGCTAGTTGAT+CGG | - | chr1.3:75764445-75764464 | None:intergenic | 35.0% |
| !! | TATCCACATAAGTTGGTGTT+GGG | + | chr1.3:75766726-75766745 | MS.gene71846:intron | 35.0% |
| !!! | TTCCCTTGTTTTTGTTGAAC+CGG | - | chr1.3:75767762-75767781 | None:intergenic | 35.0% |
| AATAAGAAGAAACAGGGCGT+AGG | - | chr1.3:75765046-75765065 | None:intergenic | 40.0% | |
| AATGGAAAGGGGAGTGATTA+AGG | - | chr1.3:75765715-75765734 | None:intergenic | 40.0% | |
| ACACATTTGACAGTGAACCT+CGG | - | chr1.3:75763904-75763923 | None:intergenic | 40.0% | |
| ACGAGATAAGTAACGACCTT+GGG | - | chr1.3:75767508-75767527 | None:intergenic | 40.0% | |
| ACTTCTATGGAGGATTGCAT+AGG | - | chr1.3:75766697-75766716 | None:intergenic | 40.0% | |
| AGACTTCATATACGAGAGAG+AGG | - | chr1.3:75765513-75765532 | None:intergenic | 40.0% | |
| AGCAATATTAAGCTTGAGCG+TGG | + | chr1.3:75765620-75765639 | MS.gene71846:intron | 40.0% | |
| ATCGTCCTCTACATTGTCAA+AGG | - | chr1.3:75768170-75768189 | None:intergenic | 40.0% | |
| ATGTATTTGTGGGAAGGGAA+AGG | + | chr1.3:75766886-75766905 | MS.gene71846:CDS | 40.0% | |
| ATTGGAGAAGGAAACCATTC+AGG | - | chr1.3:75766247-75766266 | None:intergenic | 40.0% | |
| CATCAGATGTATTTGTGGGA+AGG | + | chr1.3:75766880-75766899 | MS.gene71846:CDS | 40.0% | |
| CATCCCACCTAGTGATAATA+AGG | - | chr1.3:75765455-75765474 | None:intergenic | 40.0% | |
| CATGTCTGAATCTTCGTTTC+CGG | - | chr1.3:75764196-75764215 | None:intergenic | 40.0% | |
| CTAAAGTCATAAGGACAAGG+AGG | + | chr1.3:75767858-75767877 | MS.gene71846:intron | 40.0% | |
| CTAAGAGATGACAGTGACTA+AGG | - | chr1.3:75764854-75764873 | None:intergenic | 40.0% | |
| CTCAGCCAATAGGACATTAA+GGG | - | chr1.3:75764286-75764305 | None:intergenic | 40.0% | |
| CTTATCACTGAGAGTGAGAT+TGG | - | chr1.3:75763040-75763059 | None:intergenic | 40.0% | |
| CTTATTATCACTAGGTGGGA+TGG | + | chr1.3:75765453-75765472 | MS.gene71846:intron | 40.0% | |
| CTTCTATGGAGGATTGCATA+GGG | - | chr1.3:75766696-75766715 | None:intergenic | 40.0% | |
| CTTCTGTGAAGATCAGTTCA+AGG | - | chr1.3:75766165-75766184 | None:intergenic | 40.0% | |
| GAAAAGAGTGGATGAATCCA+TGG | + | chr1.3:75764305-75764324 | MS.gene71846:CDS | 40.0% | |
| GAAACAGGACAAACTCCTTT+GGG | + | chr1.3:75766990-75767009 | MS.gene71846:CDS | 40.0% | |
| GAAAGTTTGATTACAGCACG+CGG | - | chr1.3:75766010-75766029 | None:intergenic | 40.0% | |
| GAACTGATCTTCACAGAAGA+TGG | + | chr1.3:75766166-75766185 | MS.gene71846:CDS | 40.0% | |
| GTTCAATGTCCATGTCACAT+AGG | - | chr1.3:75766400-75766419 | None:intergenic | 40.0% | |
| TAGTCACTGTCATCTCTTAG+AGG | + | chr1.3:75764854-75764873 | MS.gene71846:CDS | 40.0% | |
| TCTCAGCCAATAGGACATTA+AGG | - | chr1.3:75764287-75764306 | None:intergenic | 40.0% | |
| TGAAACAGGACAAACTCCTT+TGG | + | chr1.3:75766989-75767008 | MS.gene71846:CDS | 40.0% | |
| TGAACTCATCTACCTGTTGA+AGG | - | chr1.3:75767025-75767044 | None:intergenic | 40.0% | |
| TGCAAACAACTGTGAAACCA+CGG | - | chr1.3:75765184-75765203 | None:intergenic | 40.0% | |
| TGGTTCATGGTTTAGCAGAA+GGG | + | chr1.3:75764148-75764167 | MS.gene71846:CDS | 40.0% | |
| TTGCAGAAGCAGTGATACTA+TGG | + | chr1.3:75766934-75766953 | MS.gene71846:CDS | 40.0% | |
| TTGGTTCATGGTTTAGCAGA+AGG | + | chr1.3:75764147-75764166 | MS.gene71846:CDS | 40.0% | |
| TTTGGATATGGAGGAGAAAG+GGG | + | chr1.3:75766216-75766235 | MS.gene71846:CDS | 40.0% | |
| ! | ACTAGCTCAGAAGTATATGC+AGG | - | chr1.3:75764717-75764736 | None:intergenic | 40.0% |
| ! | ACTGAGAATCTAGAAAGCAC+AGG | + | chr1.3:75765899-75765918 | MS.gene71846:CDS | 40.0% |
| ! | CTAACGGCGACATTTTCTTA+TGG | + | chr1.3:75767672-75767691 | MS.gene71846:intron | 40.0% |
| ! | CTGAGAATCTAGAAAGCACA+GGG | + | chr1.3:75765900-75765919 | MS.gene71846:CDS | 40.0% |
| ! | CTGTTGATAAATGCAATGCC+AGG | + | chr1.3:75765866-75765885 | MS.gene71846:CDS | 40.0% |
| ! | GAGAAGGTATATGTGTGTGT+GGG | + | chr1.3:75763129-75763148 | MS.gene71846:intron | 40.0% |
| ! | TGTATTGCATGCATTGGTGT+CGG | + | chr1.3:75766484-75766503 | MS.gene71846:intron | 40.0% |
| ! | TTTTGGGCAAACGTTGAAAC+AGG | + | chr1.3:75766975-75766994 | MS.gene71846:CDS | 40.0% |
| ! | TTTTGTAAAGCTTACCGGAG+TGG | + | chr1.3:75766848-75766867 | MS.gene71846:CDS | 40.0% |
| !! | AGGAGCTTTTTGAAGACGTA+GGG | + | chr1.3:75765771-75765790 | MS.gene71846:intron | 40.0% |
| !! | GCATAGGGAAAAGTATTTGG+AGG | - | chr1.3:75766681-75766700 | None:intergenic | 40.0% |
| !! | GGAAAAGTATTTGGAGGTCT+TGG | - | chr1.3:75766675-75766694 | None:intergenic | 40.0% |
| !! | GTATCCACATAAGTTGGTGT+TGG | + | chr1.3:75766725-75766744 | MS.gene71846:intron | 40.0% |
| !! | TAGGAGCTTTTTGAAGACGT+AGG | + | chr1.3:75765770-75765789 | MS.gene71846:intron | 40.0% |
| !! | TCGGTGCTAGATAGAGTATA+AGG | + | chr1.3:75766793-75766812 | MS.gene71846:intron | 40.0% |
| !! | TGAATCCATGGTAGCTTTAG+AGG | + | chr1.3:75764317-75764336 | MS.gene71846:CDS | 40.0% |
| !! | TGAGCACTGATTGAAAGCTT+AGG | - | chr1.3:75765089-75765108 | None:intergenic | 40.0% |
| !! | TGCCGGTTCAACAAAAACAA+GGG | + | chr1.3:75767757-75767776 | MS.gene71846:intron | 40.0% |
| !!! | TTAACCTCACTTTTTTGCCG+TGG | + | chr1.3:75765164-75765183 | MS.gene71846:intron | 40.0% |
| AACCATGAACCAATGCAGCT+TGG | - | chr1.3:75764140-75764159 | None:intergenic | 45.0% | |
| AATCTGCCAACCATCAACTC+GGG | + | chr1.3:75764461-75764480 | MS.gene71846:CDS | 45.0% | |
| AGAAAGGGGAGATACCTGAA+TGG | + | chr1.3:75766230-75766249 | MS.gene71846:CDS | 45.0% | |
| AGGATGCTTCATGCTTCCTT+TGG | + | chr1.3:75766286-75766305 | MS.gene71846:intron | 45.0% | |
| AGGCGAGAATCCGTTTCTTA+AGG | - | chr1.3:75764779-75764798 | None:intergenic | 45.0% | |
| CAACGTTTGCCCAAAAGTCT+TGG | - | chr1.3:75766971-75766990 | None:intergenic | 45.0% | |
| CAATCTGCCAACCATCAACT+CGG | + | chr1.3:75764460-75764479 | MS.gene71846:CDS | 45.0% | |
| CGGAAACGAAGATTCAGACA+TGG | + | chr1.3:75764194-75764213 | MS.gene71846:CDS | 45.0% | |
| CTTCTGCAGAAGCCTTCTTA+AGG | - | chr1.3:75763636-75763655 | None:intergenic | 45.0% | |
| CTTGATGAAAGGGATCCTCT+TGG | - | chr1.3:75762991-75763010 | None:intergenic | 45.0% | |
| CTTTAGCTGCTGCTGATGAT+TGG | + | chr1.3:75764979-75764998 | MS.gene71846:CDS | 45.0% | |
| GAAACCACGGCAAAAAAGTG+AGG | - | chr1.3:75765171-75765190 | None:intergenic | 45.0% | |
| GACGAGATAAGTAACGACCT+TGG | - | chr1.3:75767509-75767528 | None:intergenic | 45.0% | |
| GATCTGTACTCACCGTATGA+AGG | - | chr1.3:75763692-75763711 | None:intergenic | 45.0% | |
| GCTCGAGACTTTGCATGTTA+CGG | - | chr1.3:75764584-75764603 | None:intergenic | 45.0% | |
| GGATCCCTTTCATCAAGCAT+TGG | + | chr1.3:75762994-75763013 | MS.gene71846:CDS | 45.0% | |
| GTCCTCTACATTGTCAAAGG+CGG | - | chr1.3:75768167-75768186 | None:intergenic | 45.0% | |
| GTGGATGGAAAATTCTACCG+TGG | + | chr1.3:75767635-75767654 | MS.gene71846:intron | 45.0% | |
| GTGTTGAAAAATCTGGGGGA+CGG | + | chr1.3:75764510-75764529 | MS.gene71846:CDS | 45.0% | |
| TAGAGTTTCAAAGCGGTCCA+CGG | - | chr1.3:75767655-75767674 | None:intergenic | 45.0% | |
| TCAACAAACCACTCATCCTC+TGG | - | chr1.3:75768106-75768125 | None:intergenic | 45.0% | |
| TCACTCTCAGTGATAAGCTC+CGG | + | chr1.3:75763043-75763062 | MS.gene71846:CDS | 45.0% | |
| TCGCCGTTAGAGTTTCAAAG+CGG | - | chr1.3:75767662-75767681 | None:intergenic | 45.0% | |
| TCTCTTAGAGGCTAGTGGAA+TGG | + | chr1.3:75764866-75764885 | MS.gene71846:CDS | 45.0% | |
| TGAAGACAACAATGCGCAGA+CGG | + | chr1.3:75766528-75766547 | MS.gene71846:intron | 45.0% | |
| TGTCATCTCTTAGAGGCTAG+TGG | + | chr1.3:75764861-75764880 | MS.gene71846:CDS | 45.0% | |
| TTCTTCAGTTCACGCTGTTC+CGG | - | chr1.3:75766088-75766107 | None:intergenic | 45.0% | |
| TTGCTTATGCACCAACCAGT+AGG | + | chr1.3:75765006-75765025 | MS.gene71846:CDS | 45.0% | |
| ! | CACTGATTGAAAGCTTAGGC+TGG | - | chr1.3:75765085-75765104 | None:intergenic | 45.0% |
| ! | CCACTCTTTTCTCAGCCAAT+AGG | - | chr1.3:75764296-75764315 | None:intergenic | 45.0% |
| ! | CCTATTGGCTGAGAAAAGAG+TGG | + | chr1.3:75764293-75764312 | MS.gene71846:CDS | 45.0% |
| ! | CGAGAAGGTATATGTGTGTG+TGG | + | chr1.3:75763128-75763147 | MS.gene71846:intron | 45.0% |
| !! | AACCAAGCTGCATTGGTTCA+TGG | + | chr1.3:75764135-75764154 | MS.gene71846:CDS | 45.0% |
| !! | CGAAATTTGGCTTTCTTCCG+AGG | + | chr1.3:75763884-75763903 | MS.gene71846:intron | 45.0% |
| !! | GACAATAACTTGTTCGGTGC+CGG | + | chr1.3:75767740-75767759 | MS.gene71846:intron | 45.0% |
| !! | GGACCGCTTTGAAACTCTAA+CGG | + | chr1.3:75767656-75767675 | MS.gene71846:intron | 45.0% |
| !! | GTGCCGGTTCAACAAAAACA+AGG | + | chr1.3:75767756-75767775 | MS.gene71846:intron | 45.0% |
| !! | TCCATGGTAGCTTTAGAGGA+AGG | + | chr1.3:75764321-75764340 | MS.gene71846:CDS | 45.0% |
| !! | TCCTTCCTCTAAAGCTACCA+TGG | - | chr1.3:75764325-75764344 | None:intergenic | 45.0% |
| !! | TTAGCAGAAGGGTGTCAACT+CGG | + | chr1.3:75764159-75764178 | MS.gene71846:CDS | 45.0% |
| AGAAGTAGCGTATGAGCACG+AGG | - | chr1.3:75764537-75764556 | None:intergenic | 50.0% | |
| AGCCGCCTTTGACAATGTAG+AGG | + | chr1.3:75768162-75768181 | MS.gene71846:CDS | 50.0% | |
| AGCTTGAGCGTGGTATGACT+TGG | + | chr1.3:75765630-75765649 | MS.gene71846:intron | 50.0% | |
| AGTCTCGAGCCGACAACTTA+TGG | + | chr1.3:75764594-75764613 | MS.gene71846:CDS | 50.0% | |
| ATCGATGCTGTTGCTGCTAC+AGG | + | chr1.3:75767567-75767586 | MS.gene71846:CDS | 50.0% | |
| ATCTCGCAGCATGAACGAGA+AGG | + | chr1.3:75763113-75763132 | MS.gene71846:CDS | 50.0% | |
| ATCTGCCAACCATCAACTCG+GGG | + | chr1.3:75764462-75764481 | MS.gene71846:CDS | 50.0% | |
| ATCTTCGTTTCCGGTCACCA+AGG | - | chr1.3:75764187-75764206 | None:intergenic | 50.0% | |
| CAAACTCCTTTGGGTCCTCT+CGG | + | chr1.3:75766999-75767018 | MS.gene71846:CDS | 50.0% | |
| CACAGTTCTTCCTGTCCTCA+TGG | + | chr1.3:75767706-75767725 | MS.gene71846:intron | 50.0% | |
| CACTCTCAGTGATAAGCTCC+GGG | + | chr1.3:75763044-75763063 | MS.gene71846:CDS | 50.0% | |
| CTCCAGAGCAAACTCAACTG+AGG | - | chr1.3:75763935-75763954 | None:intergenic | 50.0% | |
| CTCGTTCATGCTGCGAGATT+TGG | - | chr1.3:75763112-75763131 | None:intergenic | 50.0% | |
| CTTGGGTTCAAGCCCTATGA+AGG | - | chr1.3:75766657-75766676 | None:intergenic | 50.0% | |
| GAATGACAGTGTCTTGCCAG+AGG | + | chr1.3:75768087-75768106 | MS.gene71846:intron | 50.0% | |
| GATCCTCTTGGAGTCGTGAA+AGG | - | chr1.3:75762979-75762998 | None:intergenic | 50.0% | |
| GCGAGATTTGGAAGCAACGT+AGG | - | chr1.3:75763100-75763119 | None:intergenic | 50.0% | |
| GGGAACGGAGATTCGATCAA+CGG | + | chr1.3:75764482-75764501 | MS.gene71846:CDS | 50.0% | |
| GGTGAAGTCCTTCTAGTGCA+AGG | - | chr1.3:75765823-75765842 | None:intergenic | 50.0% | |
| GTGCCCAACACCAACTTATG+TGG | - | chr1.3:75766732-75766751 | None:intergenic | 50.0% | |
| TCACCTTTCACGACTCCAAG+AGG | + | chr1.3:75762973-75762992 | MS.gene71846:CDS | 50.0% | |
| TCGATGCTGTTGCTGCTACA+GGG | + | chr1.3:75767568-75767587 | MS.gene71846:CDS | 50.0% | |
| TGAGGACAGGAAGAACTGTG+AGG | - | chr1.3:75767706-75767725 | None:intergenic | 50.0% | |
| TGTCTCAAGTCTCGACCATG+AGG | - | chr1.3:75767724-75767743 | None:intergenic | 50.0% | |
| TTCTCAGTGACAGCTGAACC+TGG | - | chr1.3:75765887-75765906 | None:intergenic | 50.0% | |
| TTGGAAGCAACGTAGGCACT+GGG | - | chr1.3:75763093-75763112 | None:intergenic | 50.0% | |
| TTTGGAAGCAACGTAGGCAC+TGG | - | chr1.3:75763094-75763113 | None:intergenic | 50.0% | |
| ! | ATCATGGGCTACTTGGCAGT+GGG | - | chr1.3:75765219-75765238 | None:intergenic | 50.0% |
| ! | TATCATGGGCTACTTGGCAG+TGG | - | chr1.3:75765220-75765239 | None:intergenic | 50.0% |
| ! | TGCCTCAGTTGAGTTTGCTC+TGG | + | chr1.3:75763930-75763949 | MS.gene71846:intron | 50.0% |
| ! | TTGGATGGCCTTGCACTAGA+AGG | + | chr1.3:75765812-75765831 | MS.gene71846:CDS | 50.0% |
| !! | AACGTAGGCACTGGGATCAA+AGG | - | chr1.3:75763085-75763104 | None:intergenic | 50.0% |
| ACCTCCTGATGCAGCTATCG+AGG | - | chr1.3:75764799-75764818 | None:intergenic | 55.0% | |
| ATATGTGTGTGTGGGCGCGT+GGG | + | chr1.3:75763137-75763156 | MS.gene71846:intron | 55.0% | |
| CAAGTCTCGACCATGAGGAC+AGG | - | chr1.3:75767719-75767738 | None:intergenic | 55.0% | |
| CCAACCATCAACTCGGGGAA+CGG | + | chr1.3:75764467-75764486 | MS.gene71846:CDS | 55.0% | |
| CTACAGGGCTAGATCCCAAC+AGG | + | chr1.3:75767583-75767602 | MS.gene71846:CDS | 55.0% | |
| CTCGAGCCGACAACTTATGG+AGG | + | chr1.3:75764597-75764616 | MS.gene71846:CDS | 55.0% | |
| GTAAAGCTTACCGGAGTGGC+AGG | + | chr1.3:75766852-75766871 | MS.gene71846:CDS | 55.0% | |
| GTGTCTTGCCAGAGGATGAG+TGG | + | chr1.3:75768095-75768114 | MS.gene71846:intron | 55.0% | |
| TATATGTGTGTGTGGGCGCG+TGG | + | chr1.3:75763136-75763155 | MS.gene71846:intron | 55.0% | |
| TCAGACGATCAACTTCGCGC+TGG | - | chr1.3:75766117-75766136 | None:intergenic | 55.0% | |
| TCTACCTGTTGAAGGCCGAG+AGG | - | chr1.3:75767017-75767036 | None:intergenic | 55.0% | |
| TGATGCAATGCCTGCCACTC+CGG | - | chr1.3:75766865-75766884 | None:intergenic | 55.0% | |
| TTCAGTTCACGCTGTTCCGG+AGG | - | chr1.3:75766085-75766104 | None:intergenic | 55.0% | |
| ! | AGGGTGTCAACTCGGTTCCT+TGG | + | chr1.3:75764167-75764186 | MS.gene71846:CDS | 55.0% |
| ! | ATCTCCGTTCCCCGAGTTGA+TGG | - | chr1.3:75764474-75764493 | None:intergenic | 55.0% |
| ! | CAACTCGGTTCCTTGGTGAC+CGG | + | chr1.3:75764174-75764193 | MS.gene71846:CDS | 55.0% |
| !! | GCATGCATTGGTGTCGGACA+TGG | + | chr1.3:75766490-75766509 | MS.gene71846:intron | 55.0% |
| CTCGCCTCGATAGCTGCATC+AGG | + | chr1.3:75764792-75764811 | MS.gene71846:CDS | 60.0% | |
| GCCTCGATAGCTGCATCAGG+AGG | + | chr1.3:75764795-75764814 | MS.gene71846:CDS | 60.0% | |
| TGAAGGCCGAGAGGACCCAA+AGG | - | chr1.3:75767008-75767027 | None:intergenic | 60.0% | |
| !! | CCGTTCCCCGAGTTGATGGT+TGG | - | chr1.3:75764470-75764489 | None:intergenic | 60.0% |
| GGGTCCTCTCGGCCTTCAAC+AGG | + | chr1.3:75767010-75767029 | MS.gene71846:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 75762955 | 75768207 | 75762955 | ID=MS.gene71846 |
| chr1.3 | mRNA | 75762955 | 75768207 | 75762955 | ID=MS.gene71846.t1;Parent=MS.gene71846 |
| chr1.3 | exon | 75762955 | 75763134 | 75762955 | ID=MS.gene71846.t1.exon1;Parent=MS.gene71846.t1 |
| chr1.3 | CDS | 75762955 | 75763134 | 75762955 | ID=cds.MS.gene71846.t1;Parent=MS.gene71846.t1 |
| chr1.3 | exon | 75763601 | 75763698 | 75763601 | ID=MS.gene71846.t1.exon2;Parent=MS.gene71846.t1 |
| chr1.3 | CDS | 75763601 | 75763698 | 75763601 | ID=cds.MS.gene71846.t1;Parent=MS.gene71846.t1 |
| chr1.3 | exon | 75764074 | 75765130 | 75764074 | ID=MS.gene71846.t1.exon3;Parent=MS.gene71846.t1 |
| chr1.3 | CDS | 75764074 | 75765130 | 75764074 | ID=cds.MS.gene71846.t1;Parent=MS.gene71846.t1 |
| chr1.3 | exon | 75765773 | 75766273 | 75765773 | ID=MS.gene71846.t1.exon4;Parent=MS.gene71846.t1 |
| chr1.3 | CDS | 75765773 | 75766273 | 75765773 | ID=cds.MS.gene71846.t1;Parent=MS.gene71846.t1 |
| chr1.3 | exon | 75766843 | 75767031 | 75766843 | ID=MS.gene71846.t1.exon5;Parent=MS.gene71846.t1 |
| chr1.3 | CDS | 75766843 | 75767031 | 75766843 | ID=cds.MS.gene71846.t1;Parent=MS.gene71846.t1 |
| chr1.3 | exon | 75767468 | 75767604 | 75767468 | ID=MS.gene71846.t1.exon6;Parent=MS.gene71846.t1 |
| chr1.3 | CDS | 75767468 | 75767604 | 75767468 | ID=cds.MS.gene71846.t1;Parent=MS.gene71846.t1 |
| chr1.3 | exon | 75768096 | 75768207 | 75768096 | ID=MS.gene71846.t1.exon7;Parent=MS.gene71846.t1 |
| chr1.3 | CDS | 75768096 | 75768207 | 75768096 | ID=cds.MS.gene71846.t1;Parent=MS.gene71846.t1 |
| Gene Sequence |
| Protein sequence |
