Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71958.t1 | XP_003608700.2 | 98.9 | 538 | 6 | 0 | 1 | 538 | 1 | 538 | 0.00E+00 | 1099.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71958.t1 | Q8LPF8 | 76.9 | 477 | 106 | 2 | 25 | 500 | 42 | 515 | 1.0e-221 | 770.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71958.t1 | G7JIV4 | 98.9 | 538 | 6 | 0 | 1 | 538 | 1 | 538 | 0.0e+00 | 1099.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050009 | MS.gene71958 | 0.803113 | 4.07E-49 | -1.69E-46 |
MS.gene050894 | MS.gene71958 | 0.803376 | 3.59E-49 | -1.69E-46 |
MS.gene051885 | MS.gene71958 | 0.802336 | 5.89E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene71958 | MS.gene058758 | PPI |
MS.gene50839 | MS.gene71958 | PPI |
MS.gene009264 | MS.gene71958 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71958.t1 | MTR_4g100810 | 98.885 | 538 | 6 | 0 | 1 | 538 | 1 | 538 | 0.0 | 1112 |
MS.gene71958.t1 | MTR_5g012770 | 79.089 | 483 | 78 | 3 | 22 | 496 | 34 | 501 | 0.0 | 796 |
MS.gene71958.t1 | MTR_3g115220 | 62.470 | 413 | 153 | 2 | 79 | 490 | 82 | 493 | 0.0 | 548 |
MS.gene71958.t1 | MTR_5g099010 | 57.206 | 451 | 178 | 4 | 68 | 506 | 68 | 515 | 0.0 | 538 |
MS.gene71958.t1 | MTR_1g031590 | 44.192 | 396 | 187 | 9 | 74 | 444 | 115 | 501 | 3.96e-107 | 331 |
MS.gene71958.t1 | MTR_4g084570 | 38.664 | 494 | 271 | 14 | 28 | 496 | 68 | 554 | 9.22e-103 | 320 |
MS.gene71958.t1 | MTR_3g005340 | 41.355 | 428 | 230 | 9 | 81 | 491 | 123 | 546 | 7.24e-101 | 316 |
MS.gene71958.t1 | MTR_5g042200 | 42.222 | 405 | 211 | 8 | 104 | 491 | 81 | 479 | 3.00e-98 | 306 |
MS.gene71958.t1 | MTR_5g081690 | 41.284 | 436 | 230 | 14 | 73 | 492 | 88 | 513 | 3.31e-98 | 307 |
MS.gene71958.t1 | MTR_5g064620 | 42.711 | 391 | 213 | 6 | 78 | 464 | 84 | 467 | 4.27e-97 | 305 |
MS.gene71958.t1 | MTR_4g082310 | 41.606 | 411 | 217 | 8 | 104 | 497 | 93 | 497 | 4.73e-97 | 304 |
MS.gene71958.t1 | MTR_4g019210 | 41.531 | 431 | 228 | 11 | 76 | 491 | 202 | 623 | 7.22e-97 | 307 |
MS.gene71958.t1 | MTR_3g099480 | 45.652 | 368 | 189 | 7 | 108 | 468 | 140 | 503 | 8.85e-95 | 299 |
MS.gene71958.t1 | MTR_6g016015 | 44.032 | 377 | 203 | 6 | 101 | 470 | 108 | 483 | 1.95e-93 | 295 |
MS.gene71958.t1 | MTR_4g125460 | 39.110 | 427 | 236 | 11 | 79 | 490 | 62 | 479 | 3.01e-92 | 291 |
MS.gene71958.t1 | MTR_3g086570 | 39.492 | 433 | 235 | 11 | 80 | 489 | 119 | 547 | 6.43e-92 | 292 |
MS.gene71958.t1 | MTR_5g059260 | 44.382 | 356 | 174 | 7 | 109 | 444 | 158 | 509 | 1.06e-91 | 292 |
MS.gene71958.t1 | MTR_2g016470 | 36.364 | 462 | 239 | 14 | 80 | 491 | 160 | 616 | 1.91e-91 | 292 |
MS.gene71958.t1 | MTR_4g110030 | 41.076 | 409 | 229 | 7 | 101 | 498 | 109 | 516 | 6.27e-91 | 288 |
MS.gene71958.t1 | MTR_4g125460 | 38.876 | 427 | 237 | 11 | 79 | 490 | 201 | 618 | 1.06e-90 | 291 |
MS.gene71958.t1 | MTR_3g096020 | 44.675 | 338 | 179 | 4 | 111 | 444 | 192 | 525 | 1.75e-89 | 287 |
MS.gene71958.t1 | MTR_2g059350 | 42.400 | 375 | 208 | 6 | 101 | 468 | 108 | 481 | 2.79e-89 | 284 |
MS.gene71958.t1 | MTR_4g132590 | 36.199 | 442 | 226 | 11 | 73 | 464 | 32 | 467 | 1.05e-80 | 261 |
MS.gene71958.t1 | MTR_5g032100 | 36.222 | 450 | 242 | 14 | 79 | 490 | 60 | 502 | 1.91e-80 | 260 |
MS.gene71958.t1 | MTR_4g132590 | 36.199 | 442 | 226 | 11 | 73 | 464 | 131 | 566 | 1.74e-79 | 260 |
MS.gene71958.t1 | MTR_1g102030 | 37.471 | 427 | 248 | 9 | 79 | 490 | 61 | 483 | 8.41e-79 | 256 |
MS.gene71958.t1 | MTR_3g026650 | 38.760 | 387 | 223 | 8 | 111 | 489 | 176 | 556 | 1.02e-76 | 252 |
MS.gene71958.t1 | MTR_3g100310 | 35.681 | 426 | 233 | 12 | 101 | 489 | 94 | 515 | 2.38e-75 | 248 |
MS.gene71958.t1 | MTR_4g023030 | 39.848 | 394 | 209 | 10 | 111 | 489 | 236 | 616 | 1.82e-72 | 243 |
MS.gene71958.t1 | MTR_3g086570 | 41.587 | 315 | 160 | 8 | 80 | 373 | 119 | 430 | 3.65e-71 | 234 |
MS.gene71958.t1 | MTR_3g026650 | 41.587 | 315 | 175 | 4 | 111 | 420 | 176 | 486 | 2.02e-66 | 223 |
MS.gene71958.t1 | MTR_1g101990 | 38.909 | 275 | 163 | 4 | 220 | 490 | 6 | 279 | 1.83e-53 | 184 |
MS.gene71958.t1 | MTR_4g010990 | 31.250 | 368 | 221 | 9 | 78 | 433 | 46 | 393 | 1.40e-50 | 179 |
MS.gene71958.t1 | MTR_7g017330 | 34.868 | 304 | 172 | 9 | 97 | 380 | 88 | 385 | 3.77e-45 | 169 |
MS.gene71958.t1 | MTR_4g010990 | 31.677 | 322 | 189 | 8 | 124 | 433 | 2 | 304 | 1.41e-44 | 161 |
MS.gene71958.t1 | MTR_3g092590 | 29.650 | 371 | 232 | 9 | 40 | 383 | 12 | 380 | 1.50e-42 | 160 |
MS.gene71958.t1 | MTR_3g092590 | 29.650 | 371 | 232 | 9 | 40 | 383 | 12 | 380 | 4.75e-42 | 160 |
MS.gene71958.t1 | MTR_3g026650 | 40.351 | 228 | 128 | 3 | 111 | 334 | 176 | 399 | 8.06e-41 | 152 |
MS.gene71958.t1 | MTR_1g007390 | 28.382 | 377 | 235 | 10 | 40 | 383 | 12 | 386 | 1.51e-35 | 141 |
MS.gene71958.t1 | MTR_7g064210 | 40.113 | 177 | 94 | 2 | 212 | 377 | 13 | 188 | 7.79e-32 | 127 |
MS.gene71958.t1 | MTR_2g038320 | 26.879 | 346 | 207 | 12 | 101 | 436 | 85 | 394 | 2.49e-26 | 111 |
MS.gene71958.t1 | MTR_4g008200 | 27.729 | 339 | 199 | 12 | 108 | 435 | 35 | 338 | 2.60e-24 | 105 |
MS.gene71958.t1 | MTR_4g008200 | 27.729 | 339 | 199 | 12 | 108 | 435 | 86 | 389 | 7.40e-24 | 104 |
MS.gene71958.t1 | MTR_1g101985 | 47.170 | 106 | 54 | 1 | 79 | 184 | 61 | 164 | 1.06e-23 | 98.6 |
MS.gene71958.t1 | MTR_1g095680 | 41.860 | 86 | 39 | 1 | 234 | 308 | 9 | 94 | 4.57e-12 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71958.t1 | AT4G16650 | 77.004 | 474 | 106 | 1 | 20 | 493 | 37 | 507 | 0.0 | 762 |
MS.gene71958.t1 | AT4G16650 | 77.004 | 474 | 106 | 1 | 20 | 493 | 37 | 507 | 0.0 | 762 |
MS.gene71958.t1 | AT1G76270 | 56.455 | 457 | 194 | 3 | 79 | 534 | 77 | 529 | 0.0 | 543 |
MS.gene71958.t1 | AT1G20550 | 54.088 | 477 | 206 | 5 | 25 | 490 | 16 | 490 | 0.0 | 539 |
MS.gene71958.t1 | AT4G38390 | 60.827 | 411 | 160 | 1 | 80 | 489 | 95 | 505 | 0.0 | 537 |
MS.gene71958.t1 | AT1G14970 | 44.089 | 406 | 201 | 10 | 107 | 491 | 8 | 408 | 2.16e-108 | 330 |
MS.gene71958.t1 | AT1G14970 | 44.089 | 406 | 201 | 10 | 107 | 491 | 34 | 434 | 4.97e-108 | 330 |
MS.gene71958.t1 | AT2G01480 | 47.875 | 353 | 168 | 7 | 108 | 444 | 154 | 506 | 1.06e-106 | 330 |
MS.gene71958.t1 | AT1G14970 | 44.089 | 406 | 201 | 10 | 107 | 491 | 154 | 554 | 2.55e-106 | 330 |
MS.gene71958.t1 | AT2G01480 | 47.875 | 353 | 168 | 7 | 108 | 444 | 154 | 506 | 6.01e-106 | 329 |
MS.gene71958.t1 | AT1G14020 | 42.356 | 399 | 217 | 6 | 104 | 490 | 87 | 484 | 4.44e-99 | 309 |
MS.gene71958.t1 | AT1G35510 | 42.469 | 405 | 209 | 8 | 108 | 492 | 159 | 559 | 4.14e-98 | 308 |
MS.gene71958.t1 | AT2G03280 | 42.462 | 398 | 215 | 7 | 104 | 488 | 84 | 480 | 4.92e-97 | 303 |
MS.gene71958.t1 | AT5G64600 | 41.935 | 403 | 208 | 9 | 108 | 489 | 117 | 514 | 1.56e-96 | 303 |
MS.gene71958.t1 | AT2G37980 | 38.990 | 495 | 258 | 17 | 35 | 497 | 141 | 623 | 1.13e-95 | 304 |
MS.gene71958.t1 | AT1G22460 | 42.822 | 404 | 207 | 11 | 108 | 491 | 160 | 559 | 1.13e-95 | 302 |
MS.gene71958.t1 | AT5G15740 | 43.501 | 377 | 205 | 6 | 101 | 470 | 99 | 474 | 4.27e-95 | 299 |
MS.gene71958.t1 | AT3G54100 | 40.323 | 434 | 235 | 11 | 79 | 497 | 195 | 619 | 4.98e-94 | 300 |
MS.gene71958.t1 | AT1G38065 | 43.514 | 370 | 190 | 8 | 108 | 460 | 26 | 393 | 1.80e-93 | 293 |
MS.gene71958.t1 | AT1G38065 | 43.514 | 370 | 190 | 8 | 108 | 460 | 36 | 403 | 2.43e-93 | 293 |
MS.gene71958.t1 | AT3G02250 | 43.236 | 377 | 206 | 6 | 101 | 470 | 99 | 474 | 2.81e-92 | 291 |
MS.gene71958.t1 | AT1G38131 | 43.514 | 370 | 190 | 8 | 108 | 460 | 155 | 522 | 6.19e-92 | 293 |
MS.gene71958.t1 | AT3G26370 | 40.441 | 408 | 215 | 10 | 105 | 490 | 155 | 556 | 9.26e-92 | 291 |
MS.gene71958.t1 | AT2G03280 | 39.765 | 425 | 215 | 8 | 104 | 488 | 84 | 507 | 2.99e-91 | 289 |
MS.gene71958.t1 | AT1G04910 | 41.860 | 387 | 217 | 5 | 79 | 460 | 61 | 444 | 1.53e-90 | 287 |
MS.gene71958.t1 | AT5G35570 | 40.610 | 426 | 229 | 10 | 80 | 490 | 225 | 641 | 3.19e-90 | 290 |
MS.gene71958.t1 | AT1G62330 | 38.614 | 404 | 199 | 9 | 109 | 464 | 222 | 624 | 2.29e-86 | 280 |
MS.gene71958.t1 | AT1G11990 | 38.875 | 409 | 219 | 9 | 79 | 464 | 163 | 563 | 4.61e-84 | 272 |
MS.gene71958.t1 | AT2G44500 | 40.674 | 386 | 218 | 6 | 111 | 489 | 180 | 561 | 3.25e-83 | 270 |
MS.gene71958.t1 | AT5G01100 | 36.131 | 429 | 248 | 10 | 79 | 490 | 190 | 609 | 5.19e-82 | 268 |
MS.gene71958.t1 | AT4G24530 | 36.345 | 476 | 257 | 16 | 55 | 490 | 48 | 517 | 5.98e-81 | 262 |
MS.gene71958.t1 | AT1G29200 | 37.678 | 422 | 218 | 9 | 83 | 460 | 44 | 464 | 1.76e-79 | 258 |
MS.gene71958.t1 | AT1G29200 | 37.678 | 422 | 218 | 9 | 83 | 460 | 44 | 464 | 1.76e-79 | 258 |
MS.gene71958.t1 | AT1G29200 | 37.678 | 422 | 218 | 9 | 83 | 460 | 160 | 580 | 1.71e-78 | 258 |
MS.gene71958.t1 | AT1G11990 | 35.650 | 446 | 219 | 10 | 79 | 464 | 148 | 585 | 1.73e-77 | 256 |
MS.gene71958.t1 | AT1G29200 | 38.363 | 391 | 197 | 8 | 113 | 460 | 1 | 390 | 3.58e-76 | 247 |
MS.gene71958.t1 | AT5G65470 | 34.956 | 452 | 245 | 14 | 79 | 489 | 59 | 502 | 7.74e-76 | 248 |
MS.gene71958.t1 | AT3G07900 | 37.613 | 444 | 254 | 13 | 63 | 491 | 139 | 574 | 1.62e-75 | 249 |
MS.gene71958.t1 | AT5G63390 | 37.824 | 386 | 229 | 7 | 111 | 489 | 167 | 548 | 9.16e-74 | 244 |
MS.gene71958.t1 | AT1G52630 | 30.130 | 385 | 233 | 9 | 72 | 443 | 39 | 400 | 6.16e-50 | 178 |
MS.gene71958.t1 | AT3G26370 | 41.395 | 215 | 114 | 4 | 105 | 309 | 155 | 367 | 9.83e-48 | 171 |
MS.gene71958.t1 | AT3G30300 | 35.974 | 303 | 172 | 9 | 95 | 380 | 90 | 387 | 6.47e-47 | 174 |
MS.gene71958.t1 | AT3G30300 | 35.974 | 303 | 172 | 9 | 95 | 380 | 90 | 387 | 6.47e-47 | 174 |
MS.gene71958.t1 | AT2G44500 | 41.667 | 228 | 126 | 3 | 111 | 334 | 180 | 404 | 6.38e-45 | 164 |
MS.gene71958.t1 | AT1G52630 | 30.120 | 332 | 199 | 7 | 124 | 443 | 2 | 312 | 6.94e-44 | 159 |
MS.gene71958.t1 | AT3G03810 | 32.075 | 371 | 226 | 10 | 38 | 383 | 10 | 379 | 1.90e-43 | 164 |
MS.gene71958.t1 | AT3G03810 | 32.075 | 371 | 226 | 10 | 38 | 383 | 10 | 379 | 1.90e-43 | 164 |
MS.gene71958.t1 | AT3G21190 | 26.471 | 340 | 201 | 12 | 108 | 435 | 90 | 392 | 1.75e-23 | 103 |
MS.gene71958.t1 | AT1G51630 | 24.706 | 340 | 207 | 11 | 108 | 435 | 91 | 393 | 1.10e-20 | 95.1 |
Find 122 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCATGCGCCAATTGATATT+TGG | 0.125119 | 8.3:+20404563 | MS.gene71958:CDS |
TGTATGTAACAGGCGATATA+TGG | 0.223337 | 8.3:+20408088 | MS.gene71958:intron |
TCACTCAATTCGTCTATAAA+TGG | 0.225919 | 8.3:-20408302 | None:intergenic |
GCTTAATATGTTCTCTCATT+TGG | 0.246182 | 8.3:-20408425 | None:intergenic |
CCTGAAAATGCCAGCATATC+TGG | 0.250790 | 8.3:-20407177 | None:intergenic |
CTTCTTTGCATTTGGTCTAA+TGG | 0.257972 | 8.3:-20408123 | None:intergenic |
CTCGGGACACGCATGGTATA+TGG | 0.258841 | 8.3:-20406420 | None:intergenic |
TAATTGGTTCATTAATTATC+TGG | 0.271850 | 8.3:+20406335 | MS.gene71958:CDS |
TTCATTTCCTCCGTTTATTT+CGG | 0.275809 | 8.3:-20408381 | None:intergenic |
TACTTACCCCAGTTCTTTGT+TGG | 0.313373 | 8.3:-20405431 | None:intergenic |
ATTGACCGCATGACCTTATC+TGG | 0.317222 | 8.3:-20406387 | None:intergenic |
GCGCTAAGCTTCTTTGCATT+TGG | 0.317689 | 8.3:-20408131 | None:intergenic |
CCACGCTTTCGTTCTCCGTC+AGG | 0.330147 | 8.3:-20407695 | None:intergenic |
ATCTCCTTTGTATAGATGTT+GGG | 0.341513 | 8.3:-20407854 | None:intergenic |
TCATGCGCCAATTGATATTT+GGG | 0.356114 | 8.3:+20404564 | MS.gene71958:CDS |
GCTCTCCCATGAATCCTCTT+TGG | 0.363004 | 8.3:-20408214 | None:intergenic |
TATGTTCTCTCATTTGGCTT+TGG | 0.365917 | 8.3:-20408419 | None:intergenic |
TCGGGACACGCATGGTATAT+GGG | 0.373647 | 8.3:-20406419 | None:intergenic |
AGCTTGGTGAAATCAGAAAA+AGG | 0.385190 | 8.3:+20407235 | MS.gene71958:CDS |
GAAGCTTAGCGCGCTGTTCA+TGG | 0.386331 | 8.3:+20408142 | MS.gene71958:CDS |
CCTTTCTCGAAAATGTATTC+CGG | 0.393462 | 8.3:-20408181 | None:intergenic |
GGACTGAACCAACAAAGAAC+TGG | 0.397018 | 8.3:+20405423 | MS.gene71958:CDS |
TTCACTGAACACACCTCAAA+TGG | 0.408067 | 8.3:-20406850 | None:intergenic |
ACTTGATCAAGATAATATTC+AGG | 0.409288 | 8.3:-20406453 | None:intergenic |
GGCGTGCCAAAGAGGATTCA+TGG | 0.413721 | 8.3:+20408208 | MS.gene71958:CDS |
TGTGATTCCCAAATATCAAT+TGG | 0.422550 | 8.3:-20404571 | None:intergenic |
GGAACTGACGCCGAAATAAA+CGG | 0.425295 | 8.3:+20408371 | MS.gene71958:CDS |
TAGTTCATCATCAAGGTCAT+TGG | 0.428900 | 8.3:-20406711 | None:intergenic |
CCCACTTCATGAGGAGTAAG+AGG | 0.434476 | 8.3:-20407725 | None:intergenic |
GTTCATGGCGAGGCATGAAA+TGG | 0.434734 | 8.3:+20408157 | MS.gene71958:CDS |
AGAGGATTCATGGGAGAGCC+AGG | 0.436961 | 8.3:+20408218 | MS.gene71958:CDS |
CATCTCCTTTGTATAGATGT+TGG | 0.438548 | 8.3:-20407855 | None:intergenic |
GTTATATAGCAGTCCATTTG+AGG | 0.440662 | 8.3:+20406837 | MS.gene71958:CDS |
CACGCTTTCGTTCTCCGTCA+GGG | 0.449075 | 8.3:-20407694 | None:intergenic |
ACATACCTGTATGTTGCATC+GGG | 0.449719 | 8.3:+20407782 | MS.gene71958:CDS |
CGTCCAGCTTTCATCTCTCC+TGG | 0.453678 | 8.3:-20408236 | None:intergenic |
AACATGGCCAGGATTCTTGC+TGG | 0.456728 | 8.3:+20407986 | MS.gene71958:CDS |
CACATACCTGTATGTTGCAT+CGG | 0.462028 | 8.3:+20407781 | MS.gene71958:CDS |
GCATTTAGAAATCTGACAAT+AGG | 0.464250 | 8.3:+20408350 | MS.gene71958:CDS |
ACGTTGTTTCTCATCTTGAA+TGG | 0.468318 | 8.3:+20403946 | MS.gene71958:CDS |
CAGGTTTGAGCCAGATATGC+TGG | 0.469168 | 8.3:+20407167 | MS.gene71958:intron |
TATTCAGGATCTGATTTCCT+CGG | 0.470623 | 8.3:-20406438 | None:intergenic |
AGATTTCTAAATGCGAGCTT+AGG | 0.471285 | 8.3:-20408341 | None:intergenic |
ATACGCGAGCGCATGTCAAA+TGG | 0.471651 | 8.3:+20405375 | MS.gene71958:CDS |
AGATAAGGTCATGCGGTCAA+TGG | 0.476341 | 8.3:+20406389 | MS.gene71958:CDS |
CCTTTGACCAGCAAGAATCC+TGG | 0.479961 | 8.3:-20407993 | None:intergenic |
CTACTACGGATGCAAAGAAA+GGG | 0.482045 | 8.3:+20404606 | MS.gene71958:CDS |
TTCTCACAGACACAAGTGCT+TGG | 0.492215 | 8.3:-20408278 | None:intergenic |
GTAATCAACAGCAGCTAGGC+GGG | 0.492518 | 8.3:-20407918 | None:intergenic |
CGGGACACGCATGGTATATG+GGG | 0.492983 | 8.3:-20406418 | None:intergenic |
ACTACTACGGATGCAAAGAA+AGG | 0.497464 | 8.3:+20404605 | MS.gene71958:CDS |
ATTCAGGATCTGATTTCCTC+GGG | 0.501133 | 8.3:-20406437 | None:intergenic |
AAAAGGTTTCAATTCTTCCT+CGG | 0.501153 | 8.3:-20407882 | None:intergenic |
AATTGAGTGAAGATGGAATC+CGG | 0.501267 | 8.3:+20408315 | MS.gene71958:CDS |
TGTAATGAGGATGCGAAAGA+TGG | 0.508686 | 8.3:+20406808 | MS.gene71958:CDS |
GTATGTAACAGGCGATATAT+GGG | 0.511833 | 8.3:+20408089 | MS.gene71958:intron |
ATAGACGAATTGAGTGAAGA+TGG | 0.512145 | 8.3:+20408308 | MS.gene71958:CDS |
TAAATGCGAGCTTAGGTGGC+CGG | 0.513190 | 8.3:-20408334 | None:intergenic |
ATTCCATGGTCGGTCATTTG+CGG | 0.516284 | 8.3:+20403879 | MS.gene71958:CDS |
GAGCCAGGAGAGATGAAAGC+TGG | 0.520156 | 8.3:+20408233 | MS.gene71958:CDS |
ACCCGTCGTCTCAAGAGTAT+TGG | 0.523710 | 8.3:-20406480 | None:intergenic |
ACAACAACGGTAACATGGCC+AGG | 0.529185 | 8.3:+20407975 | MS.gene71958:CDS |
CGGGAAGAGAATGAAAGAAA+AGG | 0.531327 | 8.3:-20407899 | None:intergenic |
TGTTAAAAGAGTTCCAGATA+AGG | 0.534714 | 8.3:+20406374 | MS.gene71958:CDS |
ACAAAACCAATACGACAACT+TGG | 0.536194 | 8.3:+20406776 | MS.gene71958:CDS |
TTGCTTATTGCCGCGAGCGG+AGG | 0.537115 | 8.3:+20405402 | MS.gene71958:CDS |
GGTTTGATGCTGCGAGCGCT+TGG | 0.537934 | 8.3:+20407746 | MS.gene71958:CDS |
CCAATTAACATCGAAAATGT+TGG | 0.538007 | 8.3:-20406319 | None:intergenic |
TCCTCTTACTCCTCATGAAG+TGG | 0.539526 | 8.3:+20407724 | MS.gene71958:CDS |
CCTCTTACTCCTCATGAAGT+GGG | 0.541378 | 8.3:+20407725 | MS.gene71958:CDS |
TTTCTAAATGCGAGCTTAGG+TGG | 0.543183 | 8.3:-20408338 | None:intergenic |
TTCGAGATCCATTCCATGGT+CGG | 0.545811 | 8.3:+20403869 | MS.gene71958:CDS |
GACTGAACCAACAAAGAACT+GGG | 0.546290 | 8.3:+20405424 | MS.gene71958:CDS |
GCCAATACTCTTGAGACGAC+GGG | 0.549625 | 8.3:+20406479 | MS.gene71958:CDS |
CCAGGATTCTTGCTGGTCAA+AGG | 0.549818 | 8.3:+20407993 | MS.gene71958:CDS |
TTGGTTCAGTCCTCCGCTCG+CGG | 0.550953 | 8.3:-20405412 | None:intergenic |
TCAAATGGACTGCTATATAA+CGG | 0.554034 | 8.3:-20406835 | None:intergenic |
GCAAATGACCGACCATGGAA+TGG | 0.559030 | 8.3:-20403877 | None:intergenic |
TGGCGAGGCATGAAATGGAC+CGG | 0.559422 | 8.3:+20408162 | MS.gene71958:CDS |
GTTAGAGTGAGTGTGGTTCG+TGG | 0.562414 | 8.3:-20403829 | None:intergenic |
TCTCCTTTGTATAGATGTTG+GGG | 0.562630 | 8.3:-20407853 | None:intergenic |
AAACCGCAAATGACCGACCA+TGG | 0.565822 | 8.3:-20403882 | None:intergenic |
CAATATTCTAAATACTACTA+CGG | 0.567932 | 8.3:+20404592 | MS.gene71958:CDS |
GCGTGCCAAAGAGGATTCAT+GGG | 0.571444 | 8.3:+20408209 | MS.gene71958:CDS |
CTGATGCTGTTGTTGTTGCA+CGG | 0.572212 | 8.3:+20406084 | MS.gene71958:CDS |
CCGCAGTTTCTTCTCTACAC+TGG | 0.574458 | 8.3:+20403989 | MS.gene71958:CDS |
CAATGTAATCAACAGCAGCT+AGG | 0.577338 | 8.3:-20407922 | None:intergenic |
AAGATCTCTGAGAGGCTGCA+TGG | 0.577808 | 8.3:-20407828 | None:intergenic |
TTAGCGCGCTGTTCATGGCG+AGG | 0.577856 | 8.3:+20408147 | MS.gene71958:CDS |
TGCTAACAACAACGGTAACA+TGG | 0.579524 | 8.3:+20407970 | MS.gene71958:CDS |
TGGAATGGATCTCGAACAGA+TGG | 0.584319 | 8.3:-20403862 | None:intergenic |
TACTTGCTTATTGCCGCGAG+CGG | 0.584367 | 8.3:+20405399 | MS.gene71958:CDS |
AAGATGAGAAACAACGTGAC+CGG | 0.587152 | 8.3:-20403940 | None:intergenic |
GGAGAGATGAAAGCTGGACG+AGG | 0.589299 | 8.3:+20408239 | MS.gene71958:CDS |
TGCCAATACTCTTGAGACGA+CGG | 0.593501 | 8.3:+20406478 | MS.gene71958:CDS |
TCTGTTCGAGATCCATTCCA+TGG | 0.594173 | 8.3:+20403865 | MS.gene71958:CDS |
AGCATCAAACCCACTTCATG+AGG | 0.596281 | 8.3:-20407734 | None:intergenic |
TGATTTCCTCGGGACACGCA+TGG | 0.609508 | 8.3:-20406427 | None:intergenic |
ATACAGGATTTGAGCCCTGA+CGG | 0.612438 | 8.3:+20407680 | MS.gene71958:intron |
CACACTTGTTGTACCTGAGT+TGG | 0.618209 | 8.3:+20406118 | MS.gene71958:CDS |
ATACCTGTATGTTGCATCGG+GGG | 0.619931 | 8.3:+20407784 | MS.gene71958:CDS |
AAAGAATTATGATCCAACTC+AGG | 0.620218 | 8.3:-20406131 | None:intergenic |
AAGGTAAAGGCGTGCCAAAG+AGG | 0.620555 | 8.3:+20408200 | MS.gene71958:CDS |
TTTCCCCAACATCTATACAA+AGG | 0.622108 | 8.3:+20407850 | MS.gene71958:CDS |
CCTGACGGAGAACGAAAGCG+TGG | 0.628749 | 8.3:+20407695 | MS.gene71958:CDS |
GTATTTGTTGCTAACAACAA+CGG | 0.634873 | 8.3:+20407962 | MS.gene71958:CDS |
GACAAAACCCCAAATGGGTG+TGG | 0.644598 | 8.3:+20403788 | None:intergenic |
AAATGGGTGTGGTGAAGTCG+TGG | 0.645174 | 8.3:+20403799 | None:intergenic |
TACAAAGGAGATGCTTGCCG+AGG | 0.652331 | 8.3:+20407865 | MS.gene71958:CDS |
CATATACCATGCGTGTCCCG+AGG | 0.654449 | 8.3:+20406421 | MS.gene71958:CDS |
TGTAATCAACAGCAGCTAGG+CGG | 0.658178 | 8.3:-20407919 | None:intergenic |
CAACTCAGGTACAACAAGTG+TGG | 0.676378 | 8.3:-20406117 | None:intergenic |
TACTACGGATGCAAAGAAAG+GGG | 0.685798 | 8.3:+20404607 | MS.gene71958:CDS |
TCAAAGCATGATAATTAACA+CGG | 0.686663 | 8.3:-20406748 | None:intergenic |
CTGACGGAGAACGAAAGCGT+GGG | 0.689450 | 8.3:+20407696 | MS.gene71958:CDS |
GAGTTCCAGATAAGGTCATG+CGG | 0.704682 | 8.3:+20406382 | MS.gene71958:CDS |
GGGACACGCATGGTATATGG+GGG | 0.711401 | 8.3:-20406417 | None:intergenic |
CATACCTGTATGTTGCATCG+GGG | 0.711632 | 8.3:+20407783 | MS.gene71958:CDS |
TTGGGGAAAAGATCTCTGAG+AGG | 0.727453 | 8.3:-20407836 | None:intergenic |
ACTGACGCCGAAATAAACGG+AGG | 0.750065 | 8.3:+20408374 | MS.gene71958:CDS |
CCAGTGTAGAGAAGAAACTG+CGG | 0.760750 | 8.3:-20403989 | None:intergenic |
ACTGAACCAACAAAGAACTG+GGG | 0.763615 | 8.3:+20405425 | MS.gene71958:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAAACAAAGTATAAAA+TGG | - | chr8.3:20405261-20405280 | None:intergenic | 10.0% |
!! | TAACATAATAATGAATAAAA+GGG | - | chr8.3:20404028-20404047 | None:intergenic | 10.0% |
!! | TATATATAACATAATTAGAA+AGG | - | chr8.3:20405149-20405168 | None:intergenic | 10.0% |
!!! | ATATAAATTTTGTTTGATAA+AGG | + | chr8.3:20408048-20408067 | MS.gene71958:intron | 10.0% |
!!! | TTATATTAATTTTTCAAACA+AGG | - | chr8.3:20408034-20408053 | None:intergenic | 10.0% |
!!! | TTGTGTAAAAATATAATTTT+AGG | + | chr8.3:20407421-20407440 | MS.gene71958:intron | 10.0% |
!! | AATATTAACAAATTGTCTAT+GGG | - | chr8.3:20405285-20405304 | None:intergenic | 15.0% |
!! | AGTTATAATGTATTACAAAA+AGG | - | chr8.3:20406256-20406275 | None:intergenic | 15.0% |
!! | CAATCAATATATAATTAGAA+AGG | - | chr8.3:20405117-20405136 | None:intergenic | 15.0% |
!! | GAAATAACATTACTTTAATT+TGG | - | chr8.3:20406028-20406047 | None:intergenic | 15.0% |
!! | GTAACATAATAATGAATAAA+AGG | - | chr8.3:20404029-20404048 | None:intergenic | 15.0% |
!!! | AAAAATATAATTTTAGGTGT+TGG | + | chr8.3:20407427-20407446 | MS.gene71958:intron | 15.0% |
!!! | AATTTGCATATTGTTTTATA+CGG | + | chr8.3:20406171-20406190 | MS.gene71958:intron | 15.0% |
!!! | ATAGACAATTTGTTAATATT+GGG | + | chr8.3:20405285-20405304 | MS.gene71958:intron | 15.0% |
!!! | TTAAAGTAATGTTATTTCTA+TGG | + | chr8.3:20406030-20406049 | MS.gene71958:intron | 15.0% |
!! | AAATTTAAATTCCATACACA+AGG | - | chr8.3:20406876-20406895 | None:intergenic | 20.0% |
!! | ATGGATAAGTTTAATGTATA+TGG | + | chr8.3:20405522-20405541 | MS.gene71958:intron | 20.0% |
!! | CAATATTAACAAATTGTCTA+TGG | - | chr8.3:20405286-20405305 | None:intergenic | 20.0% |
!! | CAATATTCTAAATACTACTA+CGG | + | chr8.3:20404592-20404611 | MS.gene71958:CDS | 20.0% |
!! | CATTATAATAGCAATATGTA+AGG | + | chr8.3:20407098-20407117 | MS.gene71958:intron | 20.0% |
!! | GATAAAATCACATAATTCAA+TGG | + | chr8.3:20405798-20405817 | MS.gene71958:intron | 20.0% |
!! | TATCAAATTATTATCGATGT+CGG | - | chr8.3:20405782-20405801 | None:intergenic | 20.0% |
!!! | AATGAAAATGACTCAAATTT+TGG | - | chr8.3:20404751-20404770 | None:intergenic | 20.0% |
!!! | AGTAGTTTTTCAAAATAATC+TGG | + | chr8.3:20407533-20407552 | MS.gene71958:intron | 20.0% |
!!! | CATAGACAATTTGTTAATAT+TGG | + | chr8.3:20405284-20405303 | MS.gene71958:intron | 20.0% |
!!! | TAATTGGTTCATTAATTATC+TGG | + | chr8.3:20406335-20406354 | MS.gene71958:CDS | 20.0% |
!!! | TGTAATTGATGTGAATTTTT+TGG | + | chr8.3:20404527-20404546 | MS.gene71958:intron | 20.0% |
!!! | TTAAATTTAACTTCCATCAA+AGG | + | chr8.3:20406888-20406907 | MS.gene71958:intron | 20.0% |
! | AAAATCATACATACATGTCA+AGG | - | chr8.3:20404698-20404717 | None:intergenic | 25.0% |
! | AATAATATCTTCACTGCTTT+AGG | + | chr8.3:20404938-20404957 | MS.gene71958:intron | 25.0% |
! | ACTTGATCAAGATAATATTC+AGG | - | chr8.3:20406456-20406475 | None:intergenic | 25.0% |
! | CAAATGAGAGAACATATTAA+CGG | + | chr8.3:20408426-20408445 | MS.gene71958:CDS | 25.0% |
! | CATATAAGTGCTTATGTATA+AGG | + | chr8.3:20404112-20404131 | MS.gene71958:intron | 25.0% |
! | CATCAATTACACAACATATT+TGG | - | chr8.3:20404518-20404537 | None:intergenic | 25.0% |
! | GATAAGTTTAATGTATATGG+AGG | + | chr8.3:20405525-20405544 | MS.gene71958:intron | 25.0% |
! | TATATATATTGCTTCAAAGC+CGG | + | chr8.3:20405163-20405182 | MS.gene71958:intron | 25.0% |
! | TCAAAGCATGATAATTAACA+CGG | - | chr8.3:20406751-20406770 | None:intergenic | 25.0% |
! | TCATGATCTATGATGATTTA+TGG | + | chr8.3:20407142-20407161 | MS.gene71958:intron | 25.0% |
! | TCTTCAAAAACAACTGAAAA+AGG | - | chr8.3:20405625-20405644 | None:intergenic | 25.0% |
! | TGTCTTAATTAGATTACACT+AGG | - | chr8.3:20405968-20405987 | None:intergenic | 25.0% |
! | TTCTATCTCATTATGGTAAT+TGG | + | chr8.3:20405338-20405357 | MS.gene71958:intron | 25.0% |
! | TTGGTCAAAAAATTGTAATG+AGG | + | chr8.3:20406795-20406814 | MS.gene71958:CDS | 25.0% |
!! | AGTTGGATCATAATTCTTTT+TGG | + | chr8.3:20406135-20406154 | MS.gene71958:CDS | 25.0% |
!! | ATCAGTCTAAAATTACCATT+AGG | - | chr8.3:20404842-20404861 | None:intergenic | 25.0% |
!! | TACTGATTGAAATCAAGAAA+AGG | + | chr8.3:20405567-20405586 | MS.gene71958:intron | 25.0% |
!! | TTGTGTTTGCTAACTAAAAA+TGG | + | chr8.3:20404670-20404689 | MS.gene71958:intron | 25.0% |
!! | TTTTCTTGATTTCAATCAGT+AGG | - | chr8.3:20405568-20405587 | None:intergenic | 25.0% |
!!! | ATTGATGTGAATTTTTTGGT+AGG | + | chr8.3:20404531-20404550 | MS.gene71958:intron | 25.0% |
!!! | GGTAAAGAAATAACTAGTTT+TGG | - | chr8.3:20407625-20407644 | None:intergenic | 25.0% |
!!! | GTAATTTTAGACTGATTTCA+AGG | + | chr8.3:20404846-20404865 | MS.gene71958:intron | 25.0% |
AAAAGGTTTCAATTCTTCCT+CGG | - | chr8.3:20407885-20407904 | None:intergenic | 30.0% | |
AAAGAATTATGATCCAACTC+AGG | - | chr8.3:20406134-20406153 | None:intergenic | 30.0% | |
AAATCCTGTATTATTGCAAG+AGG | - | chr8.3:20407671-20407690 | None:intergenic | 30.0% | |
ACTGAGTTTAGATCATGTTA+AGG | - | chr8.3:20405056-20405075 | None:intergenic | 30.0% | |
ATCTCCTTTGTATAGATGTT+GGG | - | chr8.3:20407857-20407876 | None:intergenic | 30.0% | |
ATTACCTCTTGCAATAATAC+AGG | + | chr8.3:20407664-20407683 | MS.gene71958:intron | 30.0% | |
CCAATTAACATCGAAAATGT+TGG | - | chr8.3:20406322-20406341 | None:intergenic | 30.0% | |
CTGAGTTTAGATCATGTTAA+GGG | - | chr8.3:20405055-20405074 | None:intergenic | 30.0% | |
GAAGTCACTGTATTACAAAA+AGG | - | chr8.3:20406298-20406317 | None:intergenic | 30.0% | |
GATAAAGGAGTTGTGAAAAT+GGG | - | chr8.3:20407018-20407037 | None:intergenic | 30.0% | |
GATCATGAGAATTCAAACAT+TGG | - | chr8.3:20407130-20407149 | None:intergenic | 30.0% | |
GATTTCTTCTTGTATGTAAC+AGG | + | chr8.3:20408078-20408097 | MS.gene71958:intron | 30.0% | |
GCATTTAGAAATCTGACAAT+AGG | + | chr8.3:20408350-20408369 | MS.gene71958:CDS | 30.0% | |
TATAGGGATGAGATCATATA+TGG | - | chr8.3:20406966-20406985 | None:intergenic | 30.0% | |
TATTGTCAGTGGAAATGATA+TGG | - | chr8.3:20407311-20407330 | None:intergenic | 30.0% | |
TCAATTTCAGACAGTGATAA+AGG | - | chr8.3:20407033-20407052 | None:intergenic | 30.0% | |
TCACTCAATTCGTCTATAAA+TGG | - | chr8.3:20408305-20408324 | None:intergenic | 30.0% | |
TGAGTTTAGATCATGTTAAG+GGG | - | chr8.3:20405054-20405073 | None:intergenic | 30.0% | |
TGATAAAGGAGTTGTGAAAA+TGG | - | chr8.3:20407019-20407038 | None:intergenic | 30.0% | |
TGTATTATTGCAAGAGGTAA+TGG | - | chr8.3:20407665-20407684 | None:intergenic | 30.0% | |
TGTGATTCCCAAATATCAAT+TGG | - | chr8.3:20404574-20404593 | None:intergenic | 30.0% | |
TGTTAAAAGAGTTCCAGATA+AGG | + | chr8.3:20406374-20406393 | MS.gene71958:CDS | 30.0% | |
TTAACATGATCTAAACTCAG+TGG | + | chr8.3:20405055-20405074 | MS.gene71958:intron | 30.0% | |
TTAGGATAGATTACATCAGT+AGG | + | chr8.3:20404956-20404975 | MS.gene71958:intron | 30.0% | |
TTCATTTCCTCCGTTTATTT+CGG | - | chr8.3:20408384-20408403 | None:intergenic | 30.0% | |
! | AACATAATGGCTTAAGGTTT+TGG | + | chr8.3:20404380-20404399 | MS.gene71958:intron | 30.0% |
! | ACATAATGGCTTAAGGTTTT+GGG | + | chr8.3:20404381-20404400 | MS.gene71958:intron | 30.0% |
! | ATTTTCTCATAGCAGTGTAA+TGG | - | chr8.3:20405229-20405248 | None:intergenic | 30.0% |
! | CCAACATTTTCGATGTTAAT+TGG | + | chr8.3:20406319-20406338 | MS.gene71958:CDS | 30.0% |
! | GGATCATAATTCTTTTTGGA+AGG | + | chr8.3:20406139-20406158 | MS.gene71958:CDS | 30.0% |
! | GTATTTGTTGCTAACAACAA+CGG | + | chr8.3:20407962-20407981 | MS.gene71958:CDS | 30.0% |
! | GTTTTGTCAGTAGAAATCAT+AGG | - | chr8.3:20407289-20407308 | None:intergenic | 30.0% |
! | GTTTTTGTAGTTCATCATCA+AGG | - | chr8.3:20406721-20406740 | None:intergenic | 30.0% |
!! | ATGAAGCTTTATTTGCCTAA+TGG | + | chr8.3:20404824-20404843 | MS.gene71958:intron | 30.0% |
!! | CAGATTTTTCGGTATTTTAC+AGG | + | chr8.3:20406655-20406674 | MS.gene71958:intron | 30.0% |
!! | TACATTTTCGAGAAAGGTAA+AGG | + | chr8.3:20408187-20408206 | MS.gene71958:CDS | 30.0% |
!! | TCAAATGGACTGCTATATAA+CGG | - | chr8.3:20406838-20406857 | None:intergenic | 30.0% |
!! | TCAGTTTTGATAACTCCTTT+TGG | + | chr8.3:20406613-20406632 | MS.gene71958:intron | 30.0% |
!! | TGTCACTTTCTATCTCATTA+TGG | + | chr8.3:20405331-20405350 | MS.gene71958:intron | 30.0% |
!!! | ATGTGAATTTTTTGGTAGGA+TGG | + | chr8.3:20404535-20404554 | MS.gene71958:intron | 30.0% |
!!! | GCATTTTCAGGTTGTTATTT+TGG | + | chr8.3:20407189-20407208 | MS.gene71958:CDS | 30.0% |
!!! | TTTCAGGTTGTTATTTTGGT+GGG | + | chr8.3:20407193-20407212 | MS.gene71958:CDS | 30.0% |
!!! | TTTTCAGGTTGTTATTTTGG+TGG | + | chr8.3:20407192-20407211 | MS.gene71958:CDS | 30.0% |
AAAAACAGCACATAGCAACA+TGG | - | chr8.3:20404886-20404905 | None:intergenic | 35.0% | |
AAACTTATCTACTGACGACT+GGG | - | chr8.3:20404483-20404502 | None:intergenic | 35.0% | |
AAAGGAGAAACTATTGTCAG+TGG | - | chr8.3:20407322-20407341 | None:intergenic | 35.0% | |
AATAGATCCTTGAACAAGTC+AGG | - | chr8.3:20407366-20407385 | None:intergenic | 35.0% | |
AATTGAGTGAAGATGGAATC+CGG | + | chr8.3:20408315-20408334 | MS.gene71958:CDS | 35.0% | |
ACAAAACCAATACGACAACT+TGG | + | chr8.3:20406776-20406795 | MS.gene71958:CDS | 35.0% | |
AGATTTCTAAATGCGAGCTT+AGG | - | chr8.3:20408344-20408363 | None:intergenic | 35.0% | |
ATAGACGAATTGAGTGAAGA+TGG | + | chr8.3:20408308-20408327 | MS.gene71958:CDS | 35.0% | |
ATCATGCGCCAATTGATATT+TGG | + | chr8.3:20404563-20404582 | MS.gene71958:CDS | 35.0% | |
ATGGCTCATTCACTTGATAT+TGG | - | chr8.3:20407646-20407665 | None:intergenic | 35.0% | |
ATTCACTTGTATGGTTGCTT+TGG | + | chr8.3:20404421-20404440 | MS.gene71958:intron | 35.0% | |
ATTCCTATTGTAGACCACAT+TGG | - | chr8.3:20404077-20404096 | None:intergenic | 35.0% | |
CACCACAATTGAATTCCAAA+AGG | - | chr8.3:20406631-20406650 | None:intergenic | 35.0% | |
CAGACACACCAAAAGATATA+GGG | - | chr8.3:20406982-20407001 | None:intergenic | 35.0% | |
CATCTCCTTTGTATAGATGT+TGG | - | chr8.3:20407858-20407877 | None:intergenic | 35.0% | |
CCTTTCTCGAAAATGTATTC+CGG | - | chr8.3:20408184-20408203 | None:intergenic | 35.0% | |
CTCACAAACATAATGGCTTA+AGG | + | chr8.3:20404374-20404393 | MS.gene71958:intron | 35.0% | |
CTTATTTCCATAAGTGCTAC+AGG | - | chr8.3:20404197-20404216 | None:intergenic | 35.0% | |
CTTCTTTGCATTTGGTCTAA+TGG | - | chr8.3:20408126-20408145 | None:intergenic | 35.0% | |
GAAAAAGAAAGACAAGAGCT+TGG | + | chr8.3:20407219-20407238 | MS.gene71958:CDS | 35.0% | |
GAGAAGACTCACAAACATAA+TGG | + | chr8.3:20404367-20404386 | MS.gene71958:intron | 35.0% | |
GTATGTAACAGGCGATATAT+GGG | + | chr8.3:20408089-20408108 | MS.gene71958:intron | 35.0% | |
GTTATATAGCAGTCCATTTG+AGG | + | chr8.3:20406837-20406856 | MS.gene71958:CDS | 35.0% | |
TAAACTTATCTACTGACGAC+TGG | - | chr8.3:20404484-20404503 | None:intergenic | 35.0% | |
TAGTTCATCATCAAGGTCAT+TGG | - | chr8.3:20406714-20406733 | None:intergenic | 35.0% | |
TATTCAGGATCTGATTTCCT+CGG | - | chr8.3:20406441-20406460 | None:intergenic | 35.0% | |
TCATGCGCCAATTGATATTT+GGG | + | chr8.3:20404564-20404583 | MS.gene71958:CDS | 35.0% | |
TCTATGATGATTTATGGCAC+AGG | + | chr8.3:20407148-20407167 | MS.gene71958:intron | 35.0% | |
TCTCCTTTGTATAGATGTTG+GGG | - | chr8.3:20407856-20407875 | None:intergenic | 35.0% | |
TGGAATCATATGTGTCATGT+CGG | + | chr8.3:20405818-20405837 | MS.gene71958:intron | 35.0% | |
TGGACAACATGTATGTCATA+AGG | - | chr8.3:20406946-20406965 | None:intergenic | 35.0% | |
TGGTGTACAATTCACTTGTA+TGG | + | chr8.3:20404412-20404431 | MS.gene71958:intron | 35.0% | |
TGTATGTAACAGGCGATATA+TGG | + | chr8.3:20408088-20408107 | MS.gene71958:intron | 35.0% | |
TTAAACTTATCCATCCACGA+CGG | - | chr8.3:20405516-20405535 | None:intergenic | 35.0% | |
TTGGTGAAATCAGAAAAAGG+TGG | + | chr8.3:20407238-20407257 | MS.gene71958:CDS | 35.0% | |
TTTCCCCAACATCTATACAA+AGG | + | chr8.3:20407850-20407869 | MS.gene71958:CDS | 35.0% | |
! | AGCTTGGTGAAATCAGAAAA+AGG | + | chr8.3:20407235-20407254 | MS.gene71958:CDS | 35.0% |
! | ATTTGCGGTTTCATGCTTTT+CGG | + | chr8.3:20403894-20403913 | MS.gene71958:CDS | 35.0% |
! | GATCTCATCCCTATATCTTT+TGG | + | chr8.3:20406971-20406990 | MS.gene71958:intron | 35.0% |
! | GGTCTCATTTCTCTTTTAAC+CGG | + | chr8.3:20403921-20403940 | MS.gene71958:CDS | 35.0% |
! | TATGTTCTCTCATTTGGCTT+TGG | - | chr8.3:20408422-20408441 | None:intergenic | 35.0% |
! | TCATAGGATTGTAGTCTTAC+AGG | - | chr8.3:20407273-20407292 | None:intergenic | 35.0% |
! | TGTGGTGGTAACAGATTTTT+CGG | + | chr8.3:20406644-20406663 | MS.gene71958:intron | 35.0% |
! | TTCACTTGTATGGTTGCTTT+GGG | + | chr8.3:20404422-20404441 | MS.gene71958:intron | 35.0% |
! | TTTCTCCTTTTATCACCCAT+GGG | + | chr8.3:20407332-20407351 | MS.gene71958:intron | 35.0% |
! | TTTTGACCAAGTTGTCGTAT+TGG | - | chr8.3:20406785-20406804 | None:intergenic | 35.0% |
!! | ACGTTGTTTCTCATCTTGAA+TGG | + | chr8.3:20403946-20403965 | MS.gene71958:CDS | 35.0% |
!! | ATTCTTTTTGGAAGGATGAC+AGG | + | chr8.3:20406147-20406166 | MS.gene71958:CDS | 35.0% |
!! | CTAGTTCTATCGATATCATC+AGG | - | chr8.3:20405683-20405702 | None:intergenic | 35.0% |
!! | GATTTTTAATTACACCGTCG+TGG | + | chr8.3:20405499-20405518 | MS.gene71958:intron | 35.0% |
!! | TGCTTTTTGTATTGCCAATG+TGG | + | chr8.3:20404060-20404079 | MS.gene71958:intron | 35.0% |
!!! | AGTTGTTTTTGAAGAATGCG+AGG | + | chr8.3:20405630-20405649 | MS.gene71958:intron | 35.0% |
!!! | CTCCTTTTGGAATTCAATTG+TGG | + | chr8.3:20406626-20406645 | MS.gene71958:intron | 35.0% |
!!! | CTTTTGGAATTCAATTGTGG+TGG | + | chr8.3:20406629-20406648 | MS.gene71958:intron | 35.0% |
!!! | GGTGTTGGTTTTATAAGTAG+AGG | + | chr8.3:20407442-20407461 | MS.gene71958:intron | 35.0% |
!!! | TAAGGTTTTGGGTAAAGATG+TGG | + | chr8.3:20404392-20404411 | MS.gene71958:intron | 35.0% |
!!! | TTCAGGTTGTTATTTTGGTG+GGG | + | chr8.3:20407194-20407213 | MS.gene71958:CDS | 35.0% |
AACAAAGAACTGGGGTAAGT+AGG | + | chr8.3:20405433-20405452 | MS.gene71958:intron | 40.0% | |
AACTTCCATCAAAGGCAAAG+TGG | + | chr8.3:20406896-20406915 | MS.gene71958:intron | 40.0% | |
AAGATGAGAAACAACGTGAC+CGG | - | chr8.3:20403943-20403962 | None:intergenic | 40.0% | |
AAGCTATCCTGTAGCACTTA+TGG | + | chr8.3:20404187-20404206 | MS.gene71958:intron | 40.0% | |
AATGCGAGGCTAGATTGATT+AGG | + | chr8.3:20405644-20405663 | MS.gene71958:intron | 40.0% | |
ACTACTACGGATGCAAAGAA+AGG | + | chr8.3:20404605-20404624 | MS.gene71958:CDS | 40.0% | |
ACTAGAGACAGATGCAAATC+TGG | + | chr8.3:20404982-20405001 | MS.gene71958:intron | 40.0% | |
ACTAGGTGTTTCATCATGAC+AGG | - | chr8.3:20406581-20406600 | None:intergenic | 40.0% | |
ACTGAACCAACAAAGAACTG+GGG | + | chr8.3:20405425-20405444 | MS.gene71958:CDS | 40.0% | |
ACTGACATTAACCAGCTACT+AGG | - | chr8.3:20406598-20406617 | None:intergenic | 40.0% | |
ATGATGAAACACCTAGTAGC+TGG | + | chr8.3:20406584-20406603 | MS.gene71958:intron | 40.0% | |
ATTCAGGATCTGATTTCCTC+GGG | - | chr8.3:20406440-20406459 | None:intergenic | 40.0% | |
CAATGTAATCAACAGCAGCT+AGG | - | chr8.3:20407925-20407944 | None:intergenic | 40.0% | |
CACTAGGCTCTATTCACAAT+AGG | - | chr8.3:20405952-20405971 | None:intergenic | 40.0% | |
CATGAAAGCCTCTTTCAACA+AGG | - | chr8.3:20405199-20405218 | None:intergenic | 40.0% | |
CCAGACACACCAAAAGATAT+AGG | - | chr8.3:20406983-20407002 | None:intergenic | 40.0% | |
CCTAGAGAATCATCCACATT+GGG | - | chr8.3:20404448-20404467 | None:intergenic | 40.0% | |
CGGGAAGAGAATGAAAGAAA+AGG | - | chr8.3:20407902-20407921 | None:intergenic | 40.0% | |
CTACTACGGATGCAAAGAAA+GGG | + | chr8.3:20404606-20404625 | MS.gene71958:CDS | 40.0% | |
CTTGTTGAAAGAGGCTTTCA+TGG | + | chr8.3:20405197-20405216 | MS.gene71958:intron | 40.0% | |
GACTGAACCAACAAAGAACT+GGG | + | chr8.3:20405424-20405443 | MS.gene71958:CDS | 40.0% | |
GTTTAGATCATGTTAAGGGG+AGG | - | chr8.3:20405051-20405070 | None:intergenic | 40.0% | |
TACTACGGATGCAAAGAAAG+GGG | + | chr8.3:20404607-20404626 | MS.gene71958:CDS | 40.0% | |
TACTTACCCCAGTTCTTTGT+TGG | - | chr8.3:20405434-20405453 | None:intergenic | 40.0% | |
TAGCAACATGGAGACTTAGA+AGG | - | chr8.3:20404874-20404893 | None:intergenic | 40.0% | |
TAGTGTGACCTTGTTGAAAG+AGG | + | chr8.3:20405188-20405207 | MS.gene71958:intron | 40.0% | |
TATGAAGCAAGGACACTCTA+TGG | - | chr8.3:20405862-20405881 | None:intergenic | 40.0% | |
TGCTAACAACAACGGTAACA+TGG | + | chr8.3:20407970-20407989 | MS.gene71958:CDS | 40.0% | |
TGTAATGAGGATGCGAAAGA+TGG | + | chr8.3:20406808-20406827 | MS.gene71958:CDS | 40.0% | |
TGTTCAGTGAACCTTGTGTA+TGG | + | chr8.3:20406862-20406881 | MS.gene71958:intron | 40.0% | |
TTCACTGAACACACCTCAAA+TGG | - | chr8.3:20406853-20406872 | None:intergenic | 40.0% | |
TTGCCAATGTGGTCTACAAT+AGG | + | chr8.3:20404071-20404090 | MS.gene71958:intron | 40.0% | |
TTTAATTACACCGTCGTGGA+TGG | + | chr8.3:20405503-20405522 | MS.gene71958:intron | 40.0% | |
TTTCTAAATGCGAGCTTAGG+TGG | - | chr8.3:20408341-20408360 | None:intergenic | 40.0% | |
! | ATAGAGTGTCCTTGCTTCAT+AGG | + | chr8.3:20405861-20405880 | MS.gene71958:intron | 40.0% |
! | ATATGTGTCATGTCGGTGTT+GGG | + | chr8.3:20405825-20405844 | MS.gene71958:intron | 40.0% |
! | CTCATAGCAGTGTAATGGAA+GGG | - | chr8.3:20405224-20405243 | None:intergenic | 40.0% |
! | GTGCTACAGGATAGCTTTTA+TGG | - | chr8.3:20404184-20404203 | None:intergenic | 40.0% |
! | GTTTCTCCTTTTATCACCCA+TGG | + | chr8.3:20407331-20407350 | MS.gene71958:intron | 40.0% |
! | TCATAGCAGTGTAATGGAAG+GGG | - | chr8.3:20405223-20405242 | None:intergenic | 40.0% |
! | TCTCATAGCAGTGTAATGGA+AGG | - | chr8.3:20405225-20405244 | None:intergenic | 40.0% |
! | TCTCGAACAGATGGCATTTT+TGG | - | chr8.3:20403856-20403875 | None:intergenic | 40.0% |
! | TTCTCCTTTTATCACCCATG+GGG | + | chr8.3:20407333-20407352 | MS.gene71958:intron | 40.0% |
! | TTTGCGGTTTCATGCTTTTC+GGG | + | chr8.3:20403895-20403914 | MS.gene71958:CDS | 40.0% |
!! | CAGTAATCCTGACTTGTTCA+AGG | + | chr8.3:20407356-20407375 | MS.gene71958:intron | 40.0% |
!! | CCGGAATACATTTTCGAGAA+AGG | + | chr8.3:20408181-20408200 | MS.gene71958:CDS | 40.0% |
!! | CCTATATCTTTTGGTGTGTC+TGG | + | chr8.3:20406980-20406999 | MS.gene71958:intron | 40.0% |
!!! | TCAGGTTGTTATTTTGGTGG+GGG | + | chr8.3:20407195-20407214 | MS.gene71958:CDS | 40.0% |
!!! | TTTTGGTGTTAGAGTGAGTG+TGG | - | chr8.3:20403839-20403858 | None:intergenic | 40.0% |
ACAGATGCAAATCTGGCATG+AGG | + | chr8.3:20404989-20405008 | MS.gene71958:intron | 45.0% | |
AGATAAGGTCATGCGGTCAA+TGG | + | chr8.3:20406389-20406408 | MS.gene71958:CDS | 45.0% | |
AGCATCAAACCCACTTCATG+AGG | - | chr8.3:20407737-20407756 | None:intergenic | 45.0% | |
ATACAGGATTTGAGCCCTGA+CGG | + | chr8.3:20407680-20407699 | MS.gene71958:intron | 45.0% | |
ATTCCATGGTCGGTCATTTG+CGG | + | chr8.3:20403879-20403898 | MS.gene71958:CDS | 45.0% | |
ATTGACCGCATGACCTTATC+TGG | - | chr8.3:20406390-20406409 | None:intergenic | 45.0% | |
CAACTCAGGTACAACAAGTG+TGG | - | chr8.3:20406120-20406139 | None:intergenic | 45.0% | |
CATATGTGTCATGTCGGTGT+TGG | + | chr8.3:20405824-20405843 | MS.gene71958:intron | 45.0% | |
CCAGTGTAGAGAAGAAACTG+CGG | - | chr8.3:20403992-20404011 | None:intergenic | 45.0% | |
CCCAATGTGGATGATTCTCT+AGG | + | chr8.3:20404445-20404464 | MS.gene71958:intron | 45.0% | |
CCTCTTACTCCTCATGAAGT+GGG | + | chr8.3:20407725-20407744 | MS.gene71958:CDS | 45.0% | |
CCTGAAAATGCCAGCATATC+TGG | - | chr8.3:20407180-20407199 | None:intergenic | 45.0% | |
CTGCCTATGAAGCATGGATA+CGG | + | chr8.3:20405727-20405746 | MS.gene71958:intron | 45.0% | |
GAGTTCCAGATAAGGTCATG+CGG | + | chr8.3:20406382-20406401 | MS.gene71958:CDS | 45.0% | |
GCAAGGACACTCTATGGATT+AGG | - | chr8.3:20405856-20405875 | None:intergenic | 45.0% | |
GCCTAGAGAATCATCCACAT+TGG | - | chr8.3:20404449-20404468 | None:intergenic | 45.0% | |
GCGCTAAGCTTCTTTGCATT+TGG | - | chr8.3:20408134-20408153 | None:intergenic | 45.0% | |
GGAACTGACGCCGAAATAAA+CGG | + | chr8.3:20408371-20408390 | MS.gene71958:CDS | 45.0% | |
GGACTGAACCAACAAAGAAC+TGG | + | chr8.3:20405423-20405442 | MS.gene71958:CDS | 45.0% | |
TAGTTGCTGCCTATGAAGCA+TGG | + | chr8.3:20405721-20405740 | MS.gene71958:intron | 45.0% | |
TCAACAAGGTCACACTAGTC+CGG | - | chr8.3:20405185-20405204 | None:intergenic | 45.0% | |
TCACACCACTTTGCCTTTGA+TGG | - | chr8.3:20406904-20406923 | None:intergenic | 45.0% | |
TCCTCTTACTCCTCATGAAG+TGG | + | chr8.3:20407724-20407743 | MS.gene71958:CDS | 45.0% | |
TCTGTTCGAGATCCATTCCA+TGG | + | chr8.3:20403865-20403884 | MS.gene71958:CDS | 45.0% | |
TGCCAATACTCTTGAGACGA+CGG | + | chr8.3:20406478-20406497 | MS.gene71958:CDS | 45.0% | |
TGGAATGGATCTCGAACAGA+TGG | - | chr8.3:20403865-20403884 | None:intergenic | 45.0% | |
TGTAATCAACAGCAGCTAGG+CGG | - | chr8.3:20407922-20407941 | None:intergenic | 45.0% | |
TGTCATCTGTTCTCACTCAC+TGG | + | chr8.3:20405473-20405492 | MS.gene71958:intron | 45.0% | |
TGTCCGTATCCATGCTTCAT+AGG | - | chr8.3:20405733-20405752 | None:intergenic | 45.0% | |
TGTTAAGGGGAGGTAATGAG+TGG | - | chr8.3:20405041-20405060 | None:intergenic | 45.0% | |
TTCGAGATCCATTCCATGGT+CGG | + | chr8.3:20403869-20403888 | MS.gene71958:CDS | 45.0% | |
TTCTCACAGACACAAGTGCT+TGG | - | chr8.3:20408281-20408300 | None:intergenic | 45.0% | |
TTGGGGAAAAGATCTCTGAG+AGG | - | chr8.3:20407839-20407858 | None:intergenic | 45.0% | |
! | CCAGATATGCTGGCATTTTC+AGG | + | chr8.3:20407177-20407196 | MS.gene71958:CDS | 45.0% |
! | CTGATGCTGTTGTTGTTGCA+CGG | + | chr8.3:20406084-20406103 | MS.gene71958:CDS | 45.0% |
!! | CACACTTGTTGTACCTGAGT+TGG | + | chr8.3:20406118-20406137 | MS.gene71958:CDS | 45.0% |
!! | TGTTCAACCTCCACTTTTCC+AGG | - | chr8.3:20404337-20404356 | None:intergenic | 45.0% |
!!! | GGTTTCATGCTTTTCGGGTT+GGG | + | chr8.3:20403900-20403919 | MS.gene71958:CDS | 45.0% |
AAACCGCAAATGACCGACCA+TGG | - | chr8.3:20403885-20403904 | None:intergenic | 50.0% | |
AACATGGCCAGGATTCTTGC+TGG | + | chr8.3:20407986-20408005 | MS.gene71958:CDS | 50.0% | |
AAGTCAGGATTACTGCCCCA+TGG | - | chr8.3:20407351-20407370 | None:intergenic | 50.0% | |
ACAACAACGGTAACATGGCC+AGG | + | chr8.3:20407975-20407994 | MS.gene71958:CDS | 50.0% | |
ACGCAGCAACCTATGAAGCA+AGG | - | chr8.3:20405873-20405892 | None:intergenic | 50.0% | |
ACTGACGCCGAAATAAACGG+AGG | + | chr8.3:20408374-20408393 | MS.gene71958:CDS | 50.0% | |
ACTGCCCCATGGGTGATAAA+AGG | - | chr8.3:20407340-20407359 | None:intergenic | 50.0% | |
AGTCAGGATTACTGCCCCAT+GGG | - | chr8.3:20407350-20407369 | None:intergenic | 50.0% | |
ATACGCGAGCGCATGTCAAA+TGG | + | chr8.3:20405375-20405394 | MS.gene71958:CDS | 50.0% | |
CAGGTTTGAGCCAGATATGC+TGG | + | chr8.3:20407167-20407186 | MS.gene71958:intron | 50.0% | |
CCAGGATTCTTGCTGGTCAA+AGG | + | chr8.3:20407993-20408012 | MS.gene71958:CDS | 50.0% | |
CCCACTTCATGAGGAGTAAG+AGG | - | chr8.3:20407728-20407747 | None:intergenic | 50.0% | |
CCGCAGTTTCTTCTCTACAC+TGG | + | chr8.3:20403989-20404008 | MS.gene71958:CDS | 50.0% | |
CCTTTGACCAGCAAGAATCC+TGG | - | chr8.3:20407996-20408015 | None:intergenic | 50.0% | |
GCAAATGACCGACCATGGAA+TGG | - | chr8.3:20403880-20403899 | None:intergenic | 50.0% | |
GCCAATACTCTTGAGACGAC+GGG | + | chr8.3:20406479-20406498 | MS.gene71958:CDS | 50.0% | |
GCGTGCCAAAGAGGATTCAT+GGG | + | chr8.3:20408209-20408228 | MS.gene71958:CDS | 50.0% | |
GCTCTCCCATGAATCCTCTT+TGG | - | chr8.3:20408217-20408236 | None:intergenic | 50.0% | |
GTAATCAACAGCAGCTAGGC+GGG | - | chr8.3:20407921-20407940 | None:intergenic | 50.0% | |
GTTAGAGTGAGTGTGGTTCG+TGG | - | chr8.3:20403832-20403851 | None:intergenic | 50.0% | |
GTTCATGGCGAGGCATGAAA+TGG | + | chr8.3:20408157-20408176 | MS.gene71958:CDS | 50.0% | |
TAAATGCGAGCTTAGGTGGC+CGG | - | chr8.3:20408337-20408356 | None:intergenic | 50.0% | |
TACAAAGGAGATGCTTGCCG+AGG | + | chr8.3:20407865-20407884 | MS.gene71958:CDS | 50.0% | |
TACTCTTGAGACGACGGGTA+AGG | + | chr8.3:20406484-20406503 | MS.gene71958:intron | 50.0% | |
TACTTGCTTATTGCCGCGAG+CGG | + | chr8.3:20405399-20405418 | MS.gene71958:CDS | 50.0% | |
TCGGGACACGCATGGTATAT+GGG | - | chr8.3:20406422-20406441 | None:intergenic | 50.0% | |
TGAAGCATGGATACGGACAC+CGG | + | chr8.3:20405734-20405753 | MS.gene71958:intron | 50.0% | |
! | AAGATCTCTGAGAGGCTGCA+TGG | - | chr8.3:20407831-20407850 | None:intergenic | 50.0% |
! | AAGGTAAAGGCGTGCCAAAG+AGG | + | chr8.3:20408200-20408219 | MS.gene71958:CDS | 50.0% |
! | ACCCGTCGTCTCAAGAGTAT+TGG | - | chr8.3:20406483-20406502 | None:intergenic | 50.0% |
!! | TCCACTTTTCCAGGCAACGT+GGG | - | chr8.3:20404328-20404347 | None:intergenic | 50.0% |
!!! | CGGTTTCATGCTTTTCGGGT+TGG | + | chr8.3:20403899-20403918 | MS.gene71958:CDS | 50.0% |
AGAGGATTCATGGGAGAGCC+AGG | + | chr8.3:20408218-20408237 | MS.gene71958:CDS | 55.0% | |
CACGCTTTCGTTCTCCGTCA+GGG | - | chr8.3:20407697-20407716 | None:intergenic | 55.0% | |
CACGTTGCCTGGAAAAGTGG+AGG | + | chr8.3:20404327-20404346 | MS.gene71958:intron | 55.0% | |
CATATACCATGCGTGTCCCG+AGG | + | chr8.3:20406421-20406440 | MS.gene71958:CDS | 55.0% | |
CGGGACACGCATGGTATATG+GGG | - | chr8.3:20406421-20406440 | None:intergenic | 55.0% | |
CGTCCAGCTTTCATCTCTCC+TGG | - | chr8.3:20408239-20408258 | None:intergenic | 55.0% | |
CTCGGGACACGCATGGTATA+TGG | - | chr8.3:20406423-20406442 | None:intergenic | 55.0% | |
GAAGCTTAGCGCGCTGTTCA+TGG | + | chr8.3:20408142-20408161 | MS.gene71958:CDS | 55.0% | |
GAGCCAGGAGAGATGAAAGC+TGG | + | chr8.3:20408233-20408252 | MS.gene71958:CDS | 55.0% | |
GGAGAGATGAAAGCTGGACG+AGG | + | chr8.3:20408239-20408258 | MS.gene71958:CDS | 55.0% | |
GGCGTGCCAAAGAGGATTCA+TGG | + | chr8.3:20408208-20408227 | MS.gene71958:CDS | 55.0% | |
GGGACACGCATGGTATATGG+GGG | - | chr8.3:20406420-20406439 | None:intergenic | 55.0% | |
GTCAGTGTCCGTGTCATGTC+CGG | - | chr8.3:20405756-20405775 | None:intergenic | 55.0% | |
GTTAGAAGTCCCACGTTGCC+TGG | + | chr8.3:20404316-20404335 | MS.gene71958:intron | 55.0% | |
TACGGACACCGGACATGACA+CGG | + | chr8.3:20405745-20405764 | MS.gene71958:intron | 55.0% | |
TACTGACGACTGGGTCACGA+GGG | - | chr8.3:20404474-20404493 | None:intergenic | 55.0% | |
TCCCACGTTGCCTGGAAAAG+TGG | + | chr8.3:20404324-20404343 | MS.gene71958:intron | 55.0% | |
TGATTTCCTCGGGACACGCA+TGG | - | chr8.3:20406430-20406449 | None:intergenic | 55.0% | |
TGGCGAGGCATGAAATGGAC+CGG | + | chr8.3:20408162-20408181 | MS.gene71958:CDS | 55.0% | |
! | CTGACGGAGAACGAAAGCGT+GGG | + | chr8.3:20407696-20407715 | MS.gene71958:CDS | 55.0% |
! | TGGTTGCTTTGGGCCCAATG+TGG | + | chr8.3:20404432-20404451 | MS.gene71958:intron | 55.0% |
!! | CTCCACTTTTCCAGGCAACG+TGG | - | chr8.3:20404329-20404348 | None:intergenic | 55.0% |
ACTGACGACTGGGTCACGAG+GGG | - | chr8.3:20404473-20404492 | None:intergenic | 60.0% | |
CCACGCTTTCGTTCTCCGTC+AGG | - | chr8.3:20407698-20407717 | None:intergenic | 60.0% | |
CCTGACGGAGAACGAAAGCG+TGG | + | chr8.3:20407695-20407714 | MS.gene71958:CDS | 60.0% | |
CTACTGACGACTGGGTCACG+AGG | - | chr8.3:20404475-20404494 | None:intergenic | 60.0% | |
GGTTTGATGCTGCGAGCGCT+TGG | + | chr8.3:20407746-20407765 | MS.gene71958:CDS | 60.0% | |
TTAGCGCGCTGTTCATGGCG+AGG | + | chr8.3:20408147-20408166 | MS.gene71958:CDS | 60.0% | |
TTGCTTATTGCCGCGAGCGG+AGG | + | chr8.3:20405402-20405421 | MS.gene71958:CDS | 60.0% | |
TTGGTTCAGTCCTCCGCTCG+CGG | - | chr8.3:20405415-20405434 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 20403801 | 20408445 | 20403801 | ID=MS.gene71958 |
chr8.3 | mRNA | 20403801 | 20408445 | 20403801 | ID=MS.gene71958.t1;Parent=MS.gene71958 |
chr8.3 | exon | 20403801 | 20404010 | 20403801 | ID=MS.gene71958.t1.exon1;Parent=MS.gene71958.t1 |
chr8.3 | CDS | 20403801 | 20404010 | 20403801 | ID=cds.MS.gene71958.t1;Parent=MS.gene71958.t1 |
chr8.3 | exon | 20404553 | 20404643 | 20404553 | ID=MS.gene71958.t1.exon2;Parent=MS.gene71958.t1 |
chr8.3 | CDS | 20404553 | 20404643 | 20404553 | ID=cds.MS.gene71958.t1;Parent=MS.gene71958.t1 |
chr8.3 | exon | 20405370 | 20405446 | 20405370 | ID=MS.gene71958.t1.exon3;Parent=MS.gene71958.t1 |
chr8.3 | CDS | 20405370 | 20405446 | 20405370 | ID=cds.MS.gene71958.t1;Parent=MS.gene71958.t1 |
chr8.3 | exon | 20406080 | 20406168 | 20406080 | ID=MS.gene71958.t1.exon4;Parent=MS.gene71958.t1 |
chr8.3 | CDS | 20406080 | 20406168 | 20406080 | ID=cds.MS.gene71958.t1;Parent=MS.gene71958.t1 |
chr8.3 | exon | 20406311 | 20406500 | 20406311 | ID=MS.gene71958.t1.exon5;Parent=MS.gene71958.t1 |
chr8.3 | CDS | 20406311 | 20406500 | 20406311 | ID=cds.MS.gene71958.t1;Parent=MS.gene71958.t1 |
chr8.3 | exon | 20406677 | 20406858 | 20406677 | ID=MS.gene71958.t1.exon6;Parent=MS.gene71958.t1 |
chr8.3 | CDS | 20406677 | 20406858 | 20406677 | ID=cds.MS.gene71958.t1;Parent=MS.gene71958.t1 |
chr8.3 | exon | 20407170 | 20407272 | 20407170 | ID=MS.gene71958.t1.exon7;Parent=MS.gene71958.t1 |
chr8.3 | CDS | 20407170 | 20407272 | 20407170 | ID=cds.MS.gene71958.t1;Parent=MS.gene71958.t1 |
chr8.3 | exon | 20407686 | 20408014 | 20407686 | ID=MS.gene71958.t1.exon8;Parent=MS.gene71958.t1 |
chr8.3 | CDS | 20407686 | 20408014 | 20407686 | ID=cds.MS.gene71958.t1;Parent=MS.gene71958.t1 |
chr8.3 | exon | 20408100 | 20408445 | 20408100 | ID=MS.gene71958.t1.exon9;Parent=MS.gene71958.t1 |
chr8.3 | CDS | 20408100 | 20408445 | 20408100 | ID=cds.MS.gene71958.t1;Parent=MS.gene71958.t1 |
Gene Sequence |
Protein sequence |