AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051885


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051885.t1 MTR_4g126950 98.973 292 3 0 33 324 164 455 0.0 605
MS.gene051885.t1 MTR_5g033800 48.443 289 146 2 30 316 197 484 7.87e-107 320
MS.gene051885.t1 MTR_8g069790 49.147 293 138 3 30 316 230 517 2.63e-104 315
MS.gene051885.t1 MTR_7g093450 48.410 283 144 1 39 319 309 591 7.41e-103 314
MS.gene051885.t1 MTR_0136s0010 48.936 282 142 1 39 318 231 512 6.16e-102 309
MS.gene051885.t1 MTR_4g121560 46.959 296 150 3 30 321 167 459 2.90e-101 305
MS.gene051885.t1 MTR_7g109550 49.470 283 136 3 33 315 192 467 1.97e-97 296
MS.gene051885.t1 MTR_5g059400 46.690 287 150 2 33 316 230 516 9.83e-97 296
MS.gene051885.t1 MTR_1g116130 46.690 287 150 2 33 316 230 516 9.83e-97 296
MS.gene051885.t1 MTR_7g094750 41.892 296 164 4 33 322 146 439 1.09e-77 244
MS.gene051885.t1 MTR_2g022560 41.137 299 159 6 33 321 152 443 2.91e-75 238
MS.gene051885.t1 MTR_1g058380 40.893 291 164 3 33 319 112 398 5.36e-75 236
MS.gene051885.t1 MTR_3g464570 36.577 298 169 5 26 315 91 376 1.12e-66 214
MS.gene051885.t1 MTR_3g464570 37.234 282 157 5 42 315 3 272 7.67e-66 208
MS.gene051885.t1 MTR_5g071350 35.621 306 169 6 26 315 106 399 1.80e-64 209
MS.gene051885.t1 MTR_2g015720 36.014 286 161 6 33 317 96 360 2.58e-61 199
MS.gene051885.t1 MTR_5g033800 47.568 185 96 1 30 214 197 380 2.74e-61 200
MS.gene051885.t1 MTR_4g087730 36.014 286 161 6 33 317 100 364 6.99e-61 198
MS.gene051885.t1 MTR_1g050448 34.495 287 172 4 30 315 104 375 8.64e-60 196
MS.gene051885.t1 MTR_5g034810 37.847 288 153 9 33 316 88 353 8.10e-59 193
MS.gene051885.t1 MTR_2g091175 35.410 305 166 7 17 315 87 366 1.35e-58 192
MS.gene051885.t1 MTR_2g073510 34.426 305 177 7 10 312 67 350 1.54e-58 192
MS.gene051885.t1 MTR_1g112210 35.517 290 166 6 30 315 110 382 1.58e-58 193
MS.gene051885.t1 MTR_4g016940 35.495 293 172 6 33 315 142 427 6.16e-58 192
MS.gene051885.t1 MTR_3g090120 35.034 294 178 5 30 322 185 466 1.64e-57 192
MS.gene051885.t1 MTR_1g112210 34.483 290 156 6 30 315 110 369 1.54e-56 187
MS.gene051885.t1 MTR_3g049330 36.934 287 157 9 33 316 86 351 1.69e-56 187
MS.gene051885.t1 MTR_4g088030 34.266 286 166 5 33 317 88 352 2.74e-56 186
MS.gene051885.t1 MTR_4g079700 32.450 302 179 7 17 315 84 363 7.68e-55 183
MS.gene051885.t1 MTR_2g073500 35.439 285 155 10 33 316 90 346 4.44e-54 180
MS.gene051885.t1 MTR_8g093530 32.911 316 185 6 16 318 118 419 5.06e-54 182
MS.gene051885.t1 MTR_3g070900 34.768 302 166 8 33 316 162 450 6.80e-54 182
MS.gene051885.t1 MTR_3g021060 33.566 286 164 7 33 315 101 363 8.51e-53 177
MS.gene051885.t1 MTR_5g082880 35.410 305 167 9 33 318 221 514 2.24e-52 180
MS.gene051885.t1 MTR_3g035830 31.707 287 170 6 33 316 86 349 5.41e-51 172
MS.gene051885.t1 MTR_3g021090 32.624 282 164 6 33 311 86 344 1.15e-48 168
MS.gene051885.t1 MTR_4g014440 33.553 304 163 10 33 313 118 405 7.58e-48 166
MS.gene051885.t1 MTR_3g071650 33.333 294 177 7 33 315 145 430 9.19e-48 166
MS.gene051885.t1 MTR_8g463790 31.864 295 177 9 33 315 127 409 1.58e-47 165
MS.gene051885.t1 MTR_7g068920 34.495 287 171 6 39 315 142 421 2.03e-47 165
MS.gene051885.t1 MTR_4g014430 32.997 297 171 8 33 315 164 446 3.61e-47 165
MS.gene051885.t1 MTR_5g083260 34.354 294 174 7 33 315 139 424 4.01e-47 164
MS.gene051885.t1 MTR_1g111010 34.589 292 157 11 28 316 82 342 2.60e-46 160
MS.gene051885.t1 MTR_7g070060 30.097 309 185 8 29 318 14 310 2.34e-44 154
MS.gene051885.t1 MTR_7g094750 40.984 183 107 1 33 214 146 328 3.81e-44 154
MS.gene051885.t1 MTR_7g070060 30.492 305 181 8 33 318 120 412 4.53e-43 153
MS.gene051885.t1 MTR_4g092830 29.703 303 171 14 38 316 109 393 1.18e-33 128
MS.gene051885.t1 MTR_5g069320 29.010 293 131 10 32 308 155 386 2.81e-33 126
MS.gene051885.t1 MTR_6g016240 29.283 321 163 13 30 315 125 416 2.00e-32 125
MS.gene051885.t1 MTR_2g022580 42.520 127 68 2 38 161 2 126 6.99e-31 113
MS.gene051885.t1 MTR_6g016875 29.712 313 187 10 30 322 116 415 5.81e-30 118
MS.gene051885.t1 MTR_4g125060 28.620 297 191 12 30 315 185 471 9.99e-30 118
MS.gene051885.t1 MTR_4g125060 29.195 298 188 13 30 315 224 510 1.59e-29 118
MS.gene051885.t1 MTR_4g125060 29.195 298 188 13 30 315 253 539 1.70e-29 118
MS.gene051885.t1 MTR_6g061710 27.244 312 185 9 30 315 219 514 2.91e-29 117
MS.gene051885.t1 MTR_8g093870 28.296 311 196 12 20 315 174 472 1.78e-28 114
MS.gene051885.t1 MTR_2g016060 29.126 309 180 13 27 311 103 396 1.05e-27 112
MS.gene051885.t1 MTR_8g027900 27.832 309 180 11 33 316 266 556 1.25e-27 113
MS.gene051885.t1 MTR_6g007777 28.889 315 185 13 30 323 169 465 1.69e-27 112
MS.gene051885.t1 MTR_1g076690 27.124 306 185 9 30 311 275 566 2.27e-27 112
MS.gene051885.t1 MTR_8g099300 28.296 311 183 12 30 316 126 420 2.98e-27 110
MS.gene051885.t1 MTR_6g016880 26.101 318 191 11 30 323 130 427 5.45e-27 110
MS.gene051885.t1 MTR_5g035150 29.508 305 172 14 33 311 140 427 2.84e-26 108
MS.gene051885.t1 MTR_7g019120 26.752 314 192 11 30 322 131 427 8.91e-26 107
MS.gene051885.t1 MTR_3g109840 29.180 305 170 13 33 311 127 411 1.06e-25 106
MS.gene051885.t1 MTR_5g035090 31.438 299 172 13 33 311 138 423 1.92e-25 105
MS.gene051885.t1 MTR_8g104970 30.097 309 170 14 30 311 172 461 3.73e-25 105
MS.gene051885.t1 MTR_5g035080 29.276 304 173 13 33 311 130 416 1.68e-23 100
MS.gene051885.t1 MTR_5g035070 30.218 321 175 13 33 324 142 442 1.15e-22 98.2
MS.gene051885.t1 MTR_7g033230 27.796 313 180 15 30 315 316 609 1.27e-21 95.9
MS.gene051885.t1 MTR_7g033230 27.796 313 180 15 30 315 386 679 2.33e-21 95.1
MS.gene051885.t1 MTR_5g035140 28.968 252 150 9 95 323 28 273 3.04e-20 89.0
MS.gene051885.t1 MTR_3g021150 35.849 106 64 3 175 277 1 105 4.24e-18 79.3
MS.gene051885.t1 MTR_7g070060 27.273 187 122 4 33 214 120 297 2.38e-16 78.6
MS.gene051885.t1 MTR_7g029590 33.010 103 54 2 132 223 2 100 3.34e-15 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051885.t1 AT5G20590 78.671 286 61 0 33 318 197 482 1.60e-177 500
MS.gene051885.t1 AT5G20590 80.769 182 35 0 33 214 197 378 3.99e-112 330
MS.gene051885.t1 AT1G60790 49.310 290 144 2 30 316 244 533 2.30e-106 321
MS.gene051885.t1 AT5G06700 48.763 283 143 1 38 318 315 597 3.85e-106 322
MS.gene051885.t1 AT3G12060 49.117 283 142 1 38 318 256 538 1.59e-105 319
MS.gene051885.t1 AT3G62390 48.239 284 143 3 33 316 193 472 4.63e-99 300
MS.gene051885.t1 AT5G49340 46.259 294 154 3 30 319 152 445 6.63e-95 289
MS.gene051885.t1 AT3G06080 44.108 297 157 4 33 322 158 452 5.02e-85 264
MS.gene051885.t1 AT5G19160 41.472 299 159 5 33 319 154 448 1.05e-80 253
MS.gene051885.t1 AT3G11570 39.236 288 167 3 33 316 137 420 1.40e-71 228
MS.gene051885.t1 AT5G06230 39.931 288 165 4 33 316 82 365 1.59e-70 224
MS.gene051885.t1 AT5G06230 39.931 288 165 4 33 316 123 406 5.01e-70 224
MS.gene051885.t1 AT1G78710 38.542 288 157 6 30 316 89 357 3.89e-67 214
MS.gene051885.t1 AT3G62390 49.180 183 92 1 33 215 193 374 9.33e-63 205
MS.gene051885.t1 AT5G58600 35.473 296 169 8 30 316 119 401 9.52e-63 204
MS.gene051885.t1 AT2G31110 35.664 286 160 6 33 316 100 363 3.10e-62 202
MS.gene051885.t1 AT1G48880 36.207 290 170 4 30 318 167 442 9.16e-62 203
MS.gene051885.t1 AT2G30900 38.408 289 151 8 33 315 98 365 7.31e-61 199
MS.gene051885.t1 AT3G54260 33.333 291 167 6 33 316 105 375 1.88e-57 190
MS.gene051885.t1 AT2G30010 35.526 304 171 8 26 316 106 397 4.02e-57 190
MS.gene051885.t1 AT2G34070 33.448 290 170 6 30 317 117 385 4.76e-57 189
MS.gene051885.t1 AT2G30010 35.526 304 171 8 26 316 149 440 7.77e-57 190
MS.gene051885.t1 AT1G29050 32.872 289 172 5 30 317 113 380 8.87e-57 188
MS.gene051885.t1 AT2G42570 33.803 284 166 5 33 315 102 364 1.05e-56 188
MS.gene051885.t1 AT3G55990 36.213 301 163 9 33 316 196 484 4.00e-56 189
MS.gene051885.t1 AT2G34070 33.824 272 157 6 48 317 1 251 7.66e-55 179
MS.gene051885.t1 AT5G01360 33.779 299 176 8 30 315 89 378 9.23e-54 181
MS.gene051885.t1 AT5G01360 33.779 299 176 8 30 315 145 434 3.59e-53 180
MS.gene051885.t1 AT2G40160 33.673 294 173 8 33 311 133 419 4.75e-53 180
MS.gene051885.t1 AT2G40160 33.445 299 177 8 33 316 133 424 5.33e-53 180
MS.gene051885.t1 AT3G14850 34.602 289 162 7 33 316 89 355 7.76e-53 177
MS.gene051885.t1 AT2G40150 33.550 307 169 9 33 316 127 421 6.16e-51 174
MS.gene051885.t1 AT3G14850 34.307 274 153 7 48 316 1 252 6.69e-50 167
MS.gene051885.t1 AT3G06080 43.716 183 102 1 33 214 158 340 5.69e-49 167
MS.gene051885.t1 AT2G31110 37.333 225 124 5 94 316 6 215 8.96e-49 162
MS.gene051885.t1 AT3G11030 32.997 297 175 8 33 315 162 448 9.81e-49 169
MS.gene051885.t1 AT1G73140 33.887 301 175 10 33 321 123 411 1.73e-48 167
MS.gene051885.t1 AT5G01620 32.323 297 173 8 33 315 167 449 2.86e-48 168
MS.gene051885.t1 AT5G01620 32.323 297 173 8 33 315 167 449 2.86e-48 168
MS.gene051885.t1 AT5G01620 32.323 297 173 8 33 315 175 457 3.92e-48 167
MS.gene051885.t1 AT5G19160 42.703 185 101 2 33 214 154 336 1.29e-47 164
MS.gene051885.t1 AT2G38320 29.836 305 179 9 33 316 32 322 5.02e-45 156
MS.gene051885.t1 AT2G38320 29.836 305 179 9 33 316 115 405 4.21e-44 156
MS.gene051885.t1 AT2G40320 32.203 295 179 7 33 315 137 422 3.85e-43 154
MS.gene051885.t1 AT5G06230 37.297 185 115 1 33 216 123 307 5.47e-40 142
MS.gene051885.t1 AT1G78710 32.056 287 124 8 30 316 82 297 7.30e-40 142
MS.gene051885.t1 AT5G64470 29.252 294 179 12 38 317 117 395 6.57e-36 134
MS.gene051885.t1 AT5G64470 29.373 303 173 13 38 317 117 401 2.56e-34 130
MS.gene051885.t1 AT2G14530 28.339 307 177 13 33 315 119 406 4.82e-34 129
MS.gene051885.t1 AT5G20680 29.934 304 178 9 30 315 171 457 1.05e-31 123
MS.gene051885.t1 AT5G20680 29.934 304 178 9 30 315 265 551 2.47e-31 123
MS.gene051885.t1 AT5G20680 29.934 304 178 9 30 315 265 551 2.47e-31 123
MS.gene051885.t1 AT5G20680 29.934 304 178 9 30 315 265 551 2.47e-31 123
MS.gene051885.t1 AT5G20680 29.934 304 178 9 30 315 265 551 2.47e-31 123
MS.gene051885.t1 AT1G70230 31.290 310 160 12 30 315 131 411 2.65e-31 122
MS.gene051885.t1 AT5G20680 29.934 304 178 9 30 315 247 533 2.77e-31 123
MS.gene051885.t1 AT4G25360 27.778 306 179 9 33 311 230 520 6.22e-31 122
MS.gene051885.t1 AT4G25360 27.778 306 179 9 33 311 230 520 6.22e-31 122
MS.gene051885.t1 AT2G31110 32.584 178 107 3 33 210 100 264 8.78e-31 117
MS.gene051885.t1 AT5G64020 29.836 305 183 12 33 315 113 408 1.14e-30 120
MS.gene051885.t1 AT5G58600 32.044 181 109 4 33 212 122 289 2.53e-29 114
MS.gene051885.t1 AT2G30900 35.393 178 98 5 33 207 98 261 2.73e-28 110
MS.gene051885.t1 AT5G51640 27.778 306 180 10 33 311 193 484 3.84e-27 111
MS.gene051885.t1 AT1G01430 26.959 319 188 12 33 323 154 455 1.32e-26 109
MS.gene051885.t1 AT5G15890 27.852 298 181 12 30 311 239 518 2.04e-26 109
MS.gene051885.t1 AT3G02440 28.664 307 181 13 30 315 187 476 5.70e-26 108
MS.gene051885.t1 AT3G02440 28.664 307 181 13 30 315 179 468 6.06e-26 107
MS.gene051885.t1 AT4G01080 26.471 306 183 9 33 316 146 431 6.09e-26 107
MS.gene051885.t1 AT4G23790 26.393 341 210 13 1 316 104 428 3.24e-25 105
MS.gene051885.t1 AT2G40160 29.947 187 119 4 33 214 133 312 8.29e-25 102
MS.gene051885.t1 AT3G28150 27.907 301 184 12 33 315 125 410 9.43e-24 100
MS.gene051885.t1 AT5G15900 25.246 305 193 10 30 315 121 409 2.04e-21 94.4
MS.gene051885.t1 AT5G15900 25.246 305 193 10 30 315 140 428 2.11e-21 94.7
MS.gene051885.t1 AT2G37720 28.247 308 178 15 30 315 196 482 1.28e-20 92.4
MS.gene051885.t1 AT4G11090 27.632 304 188 14 33 316 135 426 1.93e-20 91.7
MS.gene051885.t1 AT5G64470 27.778 198 122 7 38 224 117 304 3.34e-19 87.0
MS.gene051885.t1 AT5G64470 27.778 198 122 7 38 224 117 304 4.99e-19 86.7

Find 88 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAGCCATTGGTGTCTTCC+TGG 0.168068 8.4:-8092626 MS.gene051885:CDS
GCCTCAACTCCATCAAATTT+TGG 0.182186 8.4:+8093533 None:intergenic
GATATTCTTCTGCTCATTTC+AGG 0.196516 8.4:-8093430 MS.gene051885:intron
CTATAAAGACATGGGGAAAA+TGG 0.301251 8.4:-8093499 MS.gene051885:CDS
GTTACATTTAGTAATTTAAC+TGG 0.305417 8.4:+8092740 None:intergenic
TATCTATATCCAAAATTTGA+TGG 0.330959 8.4:-8093542 MS.gene051885:CDS
GTCTTTGGCAAGAGCATAAC+AGG 0.347223 8.4:-8092680 MS.gene051885:CDS
CACACAGAATGGACTCGAAT+TGG 0.368869 8.4:+8094781 None:intergenic
GATGGTCACCCATCTGTCTT+TGG 0.372601 8.4:-8092695 MS.gene051885:CDS
GCTGCAGTCCTGCCGCTTCA+TGG 0.385392 8.4:+8092643 None:intergenic
GAATGGACTCGAATTGGTTT+CGG 0.393223 8.4:+8094787 None:intergenic
AGGATGGACCCATTTAAAAC+TGG 0.405373 8.4:+8092821 None:intergenic
GCAGCCATTGGTGTCTTCCT+GGG 0.414628 8.4:-8092625 MS.gene051885:CDS
ACCGGGCACTGGTGGGCTCA+TGG 0.427472 8.4:-8094030 MS.gene051885:CDS
TCTTCAACACCGGGCACTGG+TGG 0.429397 8.4:-8094038 MS.gene051885:CDS
TCTTTGACAGAGGTGGAGAC+TGG 0.430709 8.4:-8092877 MS.gene051885:intron
GACATTCTCGTCTTCAACAC+CGG 0.435168 8.4:-8094048 MS.gene051885:CDS
ATGAGGTTTCCAGCGCCATT+TGG 0.439292 8.4:+8095992 None:intergenic
AGAGGTGGAGACTGGGACTC+AGG 0.443792 8.4:-8092869 MS.gene051885:CDS
ATTAGCTCATTCCATGCATC+AGG 0.462538 8.4:+8092599 None:intergenic
TCCATGAGCCCACCAGTGCC+CGG 0.463009 8.4:+8094029 None:intergenic
TGAGCTAATTTATGCCACTT+TGG 0.465610 8.4:-8092585 MS.gene051885:CDS
TCCTTTGAAAATGAAGATAG+TGG 0.468152 8.4:-8092789 MS.gene051885:CDS
GATAGTGGAAGAAGTGATCC+TGG 0.478208 8.4:-8092774 MS.gene051885:CDS
GTCAGCCCTCTTCCAGCGGT+TGG 0.489842 8.4:+8094068 None:intergenic
ATGATACTCATTATACCAAA+TGG 0.490084 8.4:-8096007 MS.gene051885:CDS
CTTTGACAGAGGTGGAGACT+GGG 0.493381 8.4:-8092876 MS.gene051885:intron
TGAGATCTCATTTCCTTGTG+AGG 0.501551 8.4:-8094161 MS.gene051885:CDS
TAACTGGAACCTTCATTCCC+AGG 0.502611 8.4:+8092756 None:intergenic
GAAAGGTAAACAACTAATGC+TGG 0.505310 8.4:-8094826 MS.gene051885:CDS
TCGTCTTCAACACCGGGCAC+TGG 0.506054 8.4:-8094041 MS.gene051885:CDS
CAAAGGATAGTTATTCAGGA+TGG 0.507427 8.4:+8092805 None:intergenic
CTTCAACACCGGGCACTGGT+GGG 0.508299 8.4:-8094037 MS.gene051885:CDS
CTCATTATACCAAATGGCGC+TGG 0.512407 8.4:-8096001 MS.gene051885:CDS
AGAAGTGATCCTGGGAATGA+AGG 0.515523 8.4:-8092765 MS.gene051885:CDS
AGACGTCCAACCGCTGGAAG+AGG 0.517702 8.4:-8094074 MS.gene051885:CDS
AGCGGCAGGACTGCAGCCAT+TGG 0.523845 8.4:-8092637 MS.gene051885:CDS
GTGTGTACTTCGTGAAGGCT+TGG 0.524231 8.4:-8094763 MS.gene051885:CDS
TTCACGAAGTACACACAGAA+TGG 0.526243 8.4:+8094770 None:intergenic
GAGATCTCATTTCCTTGTGA+GGG 0.527350 8.4:-8094160 MS.gene051885:CDS
GACTCAGGTGGGTCATGCTA+CGG 0.527562 8.4:-8092854 MS.gene051885:CDS
AATTCATTAGAGAGTGACCT+TGG 0.528934 8.4:+8095957 None:intergenic
TTCCATGCATCAGGTACCCC+AGG 0.530759 8.4:+8092608 None:intergenic
ATCTCATTTCCTTGTGAGGG+AGG 0.531071 8.4:-8094157 MS.gene051885:CDS
TTCCTGGGGTACCTGATGCA+TGG 0.531298 8.4:-8092610 MS.gene051885:CDS
CATGGTCACACAATATCTAA+AGG 0.534276 8.4:-8094714 MS.gene051885:CDS
TCCAAAATTTGATGGAGTTG+AGG 0.539425 8.4:-8093534 MS.gene051885:CDS
TTGACAAGACGTCCAACCGC+TGG 0.543425 8.4:-8094080 MS.gene051885:CDS
AGAATAAATTACTATAAAGA+AGG 0.546605 8.4:-8093569 MS.gene051885:CDS
GAAAGTCTCCATGAAGCGGC+AGG 0.547739 8.4:-8092651 MS.gene051885:CDS
CACACAATATCTAAAGGAAG+AGG 0.548764 8.4:-8094708 MS.gene051885:CDS
ATCCTACATTGTCAATAGAT+CGG 0.548798 8.4:-8094104 MS.gene051885:CDS
CTGACTAATTTCCGCAAGGA+TGG 0.554074 8.4:-8092713 MS.gene051885:CDS
TTACTGTAGGTTTAGTGCCA+AGG 0.554186 8.4:-8094865 MS.gene051885:intron
AAATGGCGCTGGAAACCTCA+TGG 0.554636 8.4:-8095990 MS.gene051885:CDS
GGTGGAGACTGGGACTCAGG+TGG 0.563762 8.4:-8092866 MS.gene051885:CDS
CAGCCATTGGTGTCTTCCTG+GGG 0.564368 8.4:-8092624 MS.gene051885:CDS
TGCTCTTGCCAAAGACAGAT+GGG 0.565108 8.4:+8092687 None:intergenic
TCTCATTTCCTTGTGAGGGA+GGG 0.571728 8.4:-8094156 MS.gene051885:CDS
GTGGAGACTGGGACTCAGGT+GGG 0.575618 8.4:-8092865 MS.gene051885:CDS
CAGAAAGGCTATAAAGACAT+GGG 0.576036 8.4:-8093507 MS.gene051885:CDS
CTCATGGATGTGATCTTCCA+AGG 0.576806 8.4:-8095974 MS.gene051885:CDS
ATTCTGTGTGTACTTCGTGA+AGG 0.579237 8.4:-8094768 MS.gene051885:CDS
ATGATTGCAAAATCAATGGA+AGG 0.581693 8.4:-8096031 None:intergenic
GACGTCCAACCGCTGGAAGA+GGG 0.584315 8.4:-8094073 MS.gene051885:CDS
ATCCGATCTATTGACAATGT+AGG 0.584511 8.4:+8094102 None:intergenic
ATGCTCTTGCCAAAGACAGA+TGG 0.584534 8.4:+8092686 None:intergenic
AGCAAAATGTATGAGATACA+TGG 0.585784 8.4:-8094732 MS.gene051885:CDS
AAGCAGATTGTCTACTATCG+TGG 0.591772 8.4:-8093452 MS.gene051885:CDS
TGAGCAGGACTATGATTGTA+CGG 0.591789 8.4:-8094193 MS.gene051885:intron
ACATTCTCGTCTTCAACACC+GGG 0.594424 8.4:-8094047 MS.gene051885:CDS
TGGAGTTGAGGCATACAGAA+AGG 0.596745 8.4:-8093522 MS.gene051885:CDS
GGTAAACAACTAATGCTGGT+AGG 0.608787 8.4:-8094822 MS.gene051885:CDS
ATAGTGGAAGAAGTGATCCT+GGG 0.612075 8.4:-8092773 MS.gene051885:CDS
ACAGAAAGGCTATAAAGACA+TGG 0.612533 8.4:-8093508 MS.gene051885:CDS
TGTCTGTTGCAAAACCAAAG+TGG 0.617839 8.4:+8092571 None:intergenic
TACGAACTCCCTCCCTCACA+AGG 0.618151 8.4:+8094148 None:intergenic
GCAAGAGCATAACAGGTGGA+AGG 0.619291 8.4:-8092673 MS.gene051885:CDS
GGAGTTCGTATGAATGCACA+AGG 0.632015 8.4:-8094135 MS.gene051885:CDS
GAAGGAAAGTCTCCATGAAG+CGG 0.635411 8.4:-8092655 MS.gene051885:CDS
AAAGCTGACTAATTTCCGCA+AGG 0.645537 8.4:-8092717 MS.gene051885:CDS
GAATGTCAGCCCTCTTCCAG+CGG 0.657009 8.4:+8094064 None:intergenic
AGAAAGGCTATAAAGACATG+GGG 0.676470 8.4:-8093506 MS.gene051885:CDS
GTACCCCAGGAAGACACCAA+TGG 0.683720 8.4:+8092621 None:intergenic
CAGATGGGTGACCATCCTTG+CGG 0.688035 8.4:+8092702 None:intergenic
TTTGGCAAGAGCATAACAGG+TGG 0.699834 8.4:-8092677 MS.gene051885:CDS
CTTGGAAGATCACATCCATG+AGG 0.719148 8.4:+8095975 None:intergenic
GAGTTCGTATGAATGCACAA+GGG 0.808659 8.4:-8094134 MS.gene051885:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATACTTACAAAATGATTA+AGG - chr8.4:8094271-8094290 MS.gene051885:intron 15.0%
!! AGAATAAATTACTATAAAGA+AGG - chr8.4:8095003-8095022 MS.gene051885:intron 15.0%
!!! AATAAAAACTAATTTGTGAA+AGG + chr8.4:8094873-8094892 None:intergenic 15.0%
!!! ATAAAAACTAATTTGTGAAA+GGG + chr8.4:8094872-8094891 None:intergenic 15.0%
!!! ATGTTTATCTTGTTAAATTT+TGG - chr8.4:8094839-8094858 MS.gene051885:CDS 15.0%
!!! TAAAATTTTTACAAAATACG+AGG + chr8.4:8095236-8095255 None:intergenic 15.0%
!! AACATGGTCAAAAAATAAAA+AGG - chr8.4:8094683-8094702 MS.gene051885:intron 20.0%
!! ACATGCTACTATTTATTAAA+CGG - chr8.4:8092778-8092797 MS.gene051885:CDS 20.0%
!! ATGTTAGAATTCAATAAACA+TGG + chr8.4:8094668-8094687 None:intergenic 20.0%
!! ATGTTTATTGAATTCTAACA+TGG - chr8.4:8094667-8094686 MS.gene051885:intron 20.0%
!! GAAAATAATAAAATCTGGAT+GGG - chr8.4:8094319-8094338 MS.gene051885:intron 20.0%
!! GTTACATTTAGTAATTTAAC+TGG + chr8.4:8095835-8095854 None:intergenic 20.0%
!! TAATAAGTAGTTCATGTAAT+TGG + chr8.4:8093998-8094017 None:intergenic 20.0%
!! TATATGTCAAATGATTAAGA+TGG - chr8.4:8093280-8093299 MS.gene051885:intron 20.0%
!! TATCTATATCCAAAATTTGA+TGG - chr8.4:8095030-8095049 MS.gene051885:intron 20.0%
!! TGAAAATAATAAAATCTGGA+TGG - chr8.4:8094318-8094337 MS.gene051885:intron 20.0%
!! TGTTAGAATTCAATAAACAT+GGG + chr8.4:8094667-8094686 None:intergenic 20.0%
!!! ATAAAGTACTGTCTATATTT+TGG - chr8.4:8094223-8094242 MS.gene051885:intron 20.0%
!!! CAGATTTTATTATTTTCACA+GGG + chr8.4:8094316-8094335 None:intergenic 20.0%
!!! TAAAAGATTTAGCTACTTTT+AGG - chr8.4:8095254-8095273 MS.gene051885:intron 20.0%
! AATTGTTTCCACAAATAGAA+TGG + chr8.4:8093476-8093495 None:intergenic 25.0%
! ATACAGTTATAACTATTGTC+TGG - chr8.4:8095306-8095325 MS.gene051885:intron 25.0%
! ATCAACCGATTATATGTATT+AGG - chr8.4:8094792-8094811 MS.gene051885:CDS 25.0%
! ATGATACTCATTATACCAAA+TGG - chr8.4:8092565-8092584 MS.gene051885:CDS 25.0%
! ATGTTCATAAATAGGATTCA+AGG - chr8.4:8092731-8092750 MS.gene051885:CDS 25.0%
! CATAATGATGTTGGAATATA+AGG + chr8.4:8095504-8095523 None:intergenic 25.0%
! CCTGTGAAAATAATAAAATC+TGG - chr8.4:8094314-8094333 MS.gene051885:intron 25.0%
! CTTATATTCCAACATCATTA+TGG - chr8.4:8095502-8095521 MS.gene051885:intron 25.0%
! GAAATTATTTACCATGTTTG+CGG - chr8.4:8092959-8092978 MS.gene051885:intron 25.0%
! GTCTGTCAAAAATAAACAAT+GGG - chr8.4:8094937-8094956 MS.gene051885:intron 25.0%
! GTTAGAATTCAATAAACATG+GGG + chr8.4:8094666-8094685 None:intergenic 25.0%
! GTTATCATGATAATAATGAG+TGG - chr8.4:8093045-8093064 MS.gene051885:intron 25.0%
! TAAATAGGATTCAAGGAATT+TGG - chr8.4:8092738-8092757 MS.gene051885:CDS 25.0%
! TCAATGTGATGTTCATAAAT+AGG - chr8.4:8092723-8092742 MS.gene051885:CDS 25.0%
! TCTTGCCTAATACATATAAT+CGG + chr8.4:8094800-8094819 None:intergenic 25.0%
! TTAGAATTCAATAAACATGG+GGG + chr8.4:8094665-8094684 None:intergenic 25.0%
!! ATCATGCTTTTCAATTTTCA+TGG + chr8.4:8093390-8093409 None:intergenic 25.0%
!! CCAGATTTTATTATTTTCAC+AGG + chr8.4:8094317-8094336 None:intergenic 25.0%
!! GGAAACAATTTTAAACTTGT+GGG - chr8.4:8093486-8093505 MS.gene051885:CDS 25.0%
!! TCAAATGATTAAGATGGATT+TGG - chr8.4:8093286-8093305 MS.gene051885:intron 25.0%
!! TCATGCTTTTCAATTTTCAT+GGG + chr8.4:8093389-8093408 None:intergenic 25.0%
!! TGGAAACAATTTTAAACTTG+TGG - chr8.4:8093485-8093504 MS.gene051885:CDS 25.0%
!! TGTTCATTATGCTAAGATTT+TGG - chr8.4:8094350-8094369 MS.gene051885:intron 25.0%
!! TTTTCAAAGGATAGTTATTC+AGG + chr8.4:8095774-8095793 None:intergenic 25.0%
!!! AAACTGAACCAGTTTTAAAT+GGG - chr8.4:8095743-8095762 MS.gene051885:intron 25.0%
!!! AAGGAATTTGGTTTGATTTA+GGG - chr8.4:8092750-8092769 MS.gene051885:CDS 25.0%
!!! ATGAATTCAATGTCATTTTC+TGG + chr8.4:8094174-8094193 None:intergenic 25.0%
!!! CTACTTTGTTTTCAAATTTG+AGG - chr8.4:8093887-8093906 MS.gene051885:intron 25.0%
!!! GGTGGATTAAATTAAATTCT+GGG - chr8.4:8092980-8092999 MS.gene051885:intron 25.0%
!!! TGAATTCAATGTCATTTTCT+GGG + chr8.4:8094173-8094192 None:intergenic 25.0%
!!! TTTTTTCTCCTTTCTATTTG+AGG + chr8.4:8095621-8095640 None:intergenic 25.0%
AACTATTGTCTGGAAATCAA+TGG - chr8.4:8095316-8095335 MS.gene051885:intron 30.0%
ACAGTAATATGTGAAAGAAG+TGG + chr8.4:8093694-8093713 None:intergenic 30.0%
AGATTTGAATCCATTAGAGA+AGG - chr8.4:8092919-8092938 MS.gene051885:intron 30.0%
AGCAAAATGTATGAGATACA+TGG - chr8.4:8093840-8093859 MS.gene051885:intron 30.0%
ATCCTACATTGTCAATAGAT+CGG - chr8.4:8094468-8094487 MS.gene051885:intron 30.0%
ATGATAATAATGAGTGGACA+GGG - chr8.4:8093051-8093070 MS.gene051885:intron 30.0%
CAGCAATATGATATGACTTA+TGG + chr8.4:8095670-8095689 None:intergenic 30.0%
CCAAGAGAAGTTACAAATAT+AGG + chr8.4:8094743-8094762 None:intergenic 30.0%
CCTATATTTGTAACTTCTCT+TGG - chr8.4:8094740-8094759 MS.gene051885:CDS 30.0%
CCTGTCTAAATAACTTAAGA+CGG + chr8.4:8093165-8093184 None:intergenic 30.0%
CGTCTGTCAAAAATAAACAA+TGG - chr8.4:8094936-8094955 MS.gene051885:intron 30.0%
CTATCATTCCTCAAATAGAA+AGG - chr8.4:8095610-8095629 MS.gene051885:intron 30.0%
CTTCTTTCACATATTACTGT+AGG - chr8.4:8093694-8093713 MS.gene051885:intron 30.0%
GGTAGAAATAAACTGGAAAA+CGG + chr8.4:8095208-8095227 None:intergenic 30.0%
GTTGAAAATGACATCACAAA+CGG + chr8.4:8092661-8092680 None:intergenic 30.0%
TAATATGTGAAAGAAGTGGA+CGG + chr8.4:8093690-8093709 None:intergenic 30.0%
TGATTGTGTACATTCAATTC+AGG - chr8.4:8094612-8094631 MS.gene051885:intron 30.0%
TTTGTAAGTTTGTCTCTTCA+AGG - chr8.4:8094065-8094084 MS.gene051885:CDS 30.0%
! CTAAGTGATTTTCAACTTCA+TGG + chr8.4:8095386-8095405 None:intergenic 30.0%
! TCCACTATCTTCATTTTCAA+AGG + chr8.4:8095787-8095806 None:intergenic 30.0%
! TCCTTTGAAAATGAAGATAG+TGG - chr8.4:8095783-8095802 MS.gene051885:intron 30.0%
! TTATTTTCACAGGGAAATGA+TGG + chr8.4:8094307-8094326 None:intergenic 30.0%
! TTTTGCAACAGACAAATTCA+AGG - chr8.4:8096010-8096029 MS.gene051885:CDS 30.0%
!! AAAAGCATTATGCAGAAAGT+TGG - chr8.4:8093107-8093126 MS.gene051885:intron 30.0%
!! CAAAACACAGTAAGTTTTGA+AGG + chr8.4:8093431-8093450 None:intergenic 30.0%
!! CAAGGAATTTGGTTTGATTT+AGG - chr8.4:8092749-8092768 MS.gene051885:CDS 30.0%
!! CGGTGGATTAAATTAAATTC+TGG - chr8.4:8092979-8092998 MS.gene051885:intron 30.0%
!!! CAGACGACTTGTTAATTTTA+TGG + chr8.4:8094922-8094941 None:intergenic 30.0%
!!! GAAACTGAACCAGTTTTAAA+TGG - chr8.4:8095742-8095761 MS.gene051885:intron 30.0%
!!! TAGTAGACAATCTGCTTTTT+TGG + chr8.4:8095117-8095136 None:intergenic 30.0%
AATAAACTGGAAAACGGACA+AGG + chr8.4:8095202-8095221 None:intergenic 35.0%
AATTCAAATTGAAGAGCTCC+AGG - chr8.4:8093350-8093369 MS.gene051885:intron 35.0%
AATTCATTAGAGAGTGACCT+TGG + chr8.4:8092618-8092637 None:intergenic 35.0%
AATTTAATCCACCGCAAACA+TGG + chr8.4:8092973-8092992 None:intergenic 35.0%
ACAGAAAGGCTATAAAGACA+TGG - chr8.4:8095064-8095083 MS.gene051885:intron 35.0%
ACTTATGGAGCAATTAGTAG+TGG + chr8.4:8095655-8095674 None:intergenic 35.0%
AGAAAGGCTATAAAGACATG+GGG - chr8.4:8095066-8095085 MS.gene051885:intron 35.0%
ATAACGCGATTTGATTGTCA+AGG + chr8.4:8092882-8092901 None:intergenic 35.0%
ATCCGATCTATTGACAATGT+AGG + chr8.4:8094473-8094492 None:intergenic 35.0%
ATTATTTACCATGTTTGCGG+TGG - chr8.4:8092962-8092981 MS.gene051885:intron 35.0%
CAAAGGATAGTTATTCAGGA+TGG + chr8.4:8095770-8095789 None:intergenic 35.0%
CACACAATATCTAAAGGAAG+AGG - chr8.4:8093864-8093883 MS.gene051885:intron 35.0%
CAGAAAGGCTATAAAGACAT+GGG - chr8.4:8095065-8095084 MS.gene051885:intron 35.0%
CATGATAATAATGAGTGGAC+AGG - chr8.4:8093050-8093069 MS.gene051885:intron 35.0%
CATGGTCACACAATATCTAA+AGG - chr8.4:8093858-8093877 MS.gene051885:intron 35.0%
CATTATGGAGAATAGGAAAG+TGG - chr8.4:8095517-8095536 MS.gene051885:intron 35.0%
CCAACATCATTATGGAGAAT+AGG - chr8.4:8095510-8095529 MS.gene051885:intron 35.0%
CCGTCTTAAGTTATTTAGAC+AGG - chr8.4:8093162-8093181 MS.gene051885:intron 35.0%
CCTATTCTCCATAATGATGT+TGG + chr8.4:8095513-8095532 None:intergenic 35.0%
CTATAAAGACATGGGGAAAA+TGG - chr8.4:8095073-8095092 MS.gene051885:intron 35.0%
GAAAGGTAAACAACTAATGC+TGG - chr8.4:8093746-8093765 MS.gene051885:intron 35.0%
GATATTCTTCTGCTCATTTC+AGG - chr8.4:8095142-8095161 MS.gene051885:intron 35.0%
GGAATTGACCATTCTATTTG+TGG - chr8.4:8093465-8093484 MS.gene051885:CDS 35.0%
GTACATTCAATTCAGGAAAC+TGG - chr8.4:8094619-8094638 MS.gene051885:intron 35.0%
GTCAATTCCTGAAAAATTGC+TGG + chr8.4:8093454-8093473 None:intergenic 35.0%
TAACGCGATTTGATTGTCAA+GGG + chr8.4:8092881-8092900 None:intergenic 35.0%
TATTCAACAGCCTTCTCTAA+TGG + chr8.4:8092932-8092951 None:intergenic 35.0%
TCCAAAATTTGATGGAGTTG+AGG - chr8.4:8095038-8095057 MS.gene051885:intron 35.0%
TTATAGAGGGAAGATTGGAT+TGG - chr8.4:8093211-8093230 MS.gene051885:intron 35.0%
TTGTCTCTTCAAGGTTTGAT+GGG - chr8.4:8094074-8094093 MS.gene051885:CDS 35.0%
TTTGTCTCTTCAAGGTTTGA+TGG - chr8.4:8094073-8094092 MS.gene051885:CDS 35.0%
! AAGCATAGCTTCTTTTGATG+TGG - chr8.4:8093528-8093547 MS.gene051885:CDS 35.0%
! AGTTTTTATTCCCTGCTATG+TGG - chr8.4:8094883-8094902 MS.gene051885:intron 35.0%
! GTTCGGTAACTGTTGATAAA+TGG - chr8.4:8093243-8093262 MS.gene051885:intron 35.0%
! TGAGCTAATTTATGCCACTT+TGG - chr8.4:8095987-8096006 MS.gene051885:CDS 35.0%
! TGTTTTGCCAGCAATTTTTC+AGG - chr8.4:8093444-8093463 MS.gene051885:CDS 35.0%
! TTTTCCCAACATTGAACTCA+AGG + chr8.4:8093016-8093035 None:intergenic 35.0%
!! TGGATTGGTAGTAGATAGTT+CGG - chr8.4:8093226-8093245 MS.gene051885:intron 35.0%
!! TTAGCCGTTCTAAAGTGAAA+GGG + chr8.4:8095460-8095479 None:intergenic 35.0%
!! TTCCAGTTTATTTCTACCGA+GGG - chr8.4:8095210-8095229 MS.gene051885:intron 35.0%
!! TTTAGCCGTTCTAAAGTGAA+AGG + chr8.4:8095461-8095480 None:intergenic 35.0%
!! TTTCCAGTTTATTTCTACCG+AGG - chr8.4:8095209-8095228 MS.gene051885:intron 35.0%
!!! CAGTAAGTTTTGAAGGAACA+CGG + chr8.4:8093424-8093443 None:intergenic 35.0%
AAAGCTGACTAATTTCCGCA+AGG - chr8.4:8095855-8095874 MS.gene051885:intron 40.0%
AAGCAGATTGTCTACTATCG+TGG - chr8.4:8095120-8095139 MS.gene051885:intron 40.0%
ACTAACAGCTGAGAAGCAAA+GGG + chr8.4:8093634-8093653 None:intergenic 40.0%
AGAGCCTTGAGTTCAATGTT+GGG - chr8.4:8093009-8093028 MS.gene051885:intron 40.0%
AGCATTATGCAGAAAGTTGG+AGG - chr8.4:8093110-8093129 MS.gene051885:intron 40.0%
ATGGGTTTGAGTATGATTCC+TGG + chr8.4:8093371-8093390 None:intergenic 40.0%
ATTAGCTCATTCCATGCATC+AGG + chr8.4:8095976-8095995 None:intergenic 40.0%
ATTCTGTGTGTACTTCGTGA+AGG - chr8.4:8093804-8093823 MS.gene051885:intron 40.0%
CTGCATTATAGAGGGAAGAT+TGG - chr8.4:8093206-8093225 MS.gene051885:intron 40.0%
GAAAGACAAACCACATAGCA+GGG + chr8.4:8094896-8094915 None:intergenic 40.0%
GAGATCTCATTTCCTTGTGA+GGG - chr8.4:8094412-8094431 MS.gene051885:intron 40.0%
GAGTTCGTATGAATGCACAA+GGG - chr8.4:8094438-8094457 MS.gene051885:intron 40.0%
GGTAAACAACTAATGCTGGT+AGG - chr8.4:8093750-8093769 MS.gene051885:intron 40.0%
TACTAACAGCTGAGAAGCAA+AGG + chr8.4:8093635-8093654 None:intergenic 40.0%
TAGAGCCTTGAGTTCAATGT+TGG - chr8.4:8093008-8093027 MS.gene051885:intron 40.0%
TGAAAGACAAACCACATAGC+AGG + chr8.4:8094897-8094916 None:intergenic 40.0%
TGAGATCTCATTTCCTTGTG+AGG - chr8.4:8094411-8094430 MS.gene051885:intron 40.0%
TGAGCAGGACTATGATTGTA+CGG - chr8.4:8094379-8094398 MS.gene051885:intron 40.0%
TGTCTGTTGCAAAACCAAAG+TGG + chr8.4:8096004-8096023 None:intergenic 40.0%
TTACTGTAGGTTTAGTGCCA+AGG - chr8.4:8093707-8093726 MS.gene051885:intron 40.0%
TTCACGAAGTACACACAGAA+TGG + chr8.4:8093805-8093824 None:intergenic 40.0%
TTTACAAAATACGAGGCCCT+CGG + chr8.4:8095229-8095248 None:intergenic 40.0%
! AGGATGGACCCATTTAAAAC+TGG + chr8.4:8095754-8095773 None:intergenic 40.0%
! ATAGTGGAAGAAGTGATCCT+GGG - chr8.4:8095799-8095818 MS.gene051885:intron 40.0%
! ATGTAAGCGCTGCATTATAG+AGG - chr8.4:8093197-8093216 MS.gene051885:intron 40.0%
! GAATGGACTCGAATTGGTTT+CGG + chr8.4:8093788-8093807 None:intergenic 40.0%
! GCCTCAACTCCATCAAATTT+TGG + chr8.4:8095042-8095061 None:intergenic 40.0%
! GTTTAGTGCCAAGGACTTTT+TGG - chr8.4:8093716-8093735 MS.gene051885:intron 40.0%
! TGCACCCTTTCACTTTAGAA+CGG - chr8.4:8095453-8095472 MS.gene051885:intron 40.0%
! TGTAAGCGCTGCATTATAGA+GGG - chr8.4:8093198-8093217 MS.gene051885:intron 40.0%
!! GACTTTTTGGCAAGACTGAA+AGG - chr8.4:8093729-8093748 MS.gene051885:intron 40.0%
!! TTATTAAACGGTGTTACCGC+AGG - chr8.4:8092790-8092809 MS.gene051885:CDS 40.0%
!! TTCAGGTTTATTTCTGCGAG+TGG - chr8.4:8092828-8092847 MS.gene051885:CDS 40.0%
ACATTCTCGTCTTCAACACC+GGG - chr8.4:8094525-8094544 MS.gene051885:intron 45.0%
AGAAGTGATCCTGGGAATGA+AGG - chr8.4:8095807-8095826 MS.gene051885:intron 45.0%
ATCAAATCGCGTTATTGCGC+TGG - chr8.4:8092887-8092906 MS.gene051885:intron 45.0%
ATCTCATTTCCTTGTGAGGG+AGG - chr8.4:8094415-8094434 MS.gene051885:intron 45.0%
ATGCTCTTGCCAAAGACAGA+TGG + chr8.4:8095889-8095908 None:intergenic 45.0%
CAGTCTTGCCAAAAAGTCCT+TGG + chr8.4:8093727-8093746 None:intergenic 45.0%
CTCATGGAAAAACTGCTCGA+GGG - chr8.4:8094558-8094577 MS.gene051885:intron 45.0%
CTCATGGATGTGATCTTCCA+AGG - chr8.4:8092598-8092617 MS.gene051885:CDS 45.0%
CTCATTATACCAAATGGCGC+TGG - chr8.4:8092571-8092590 MS.gene051885:CDS 45.0%
CTGACTAATTTCCGCAAGGA+TGG - chr8.4:8095859-8095878 MS.gene051885:intron 45.0%
CTTGGAAGATCACATCCATG+AGG + chr8.4:8092600-8092619 None:intergenic 45.0%
GAAGGAAAGTCTCCATGAAG+CGG - chr8.4:8095917-8095936 MS.gene051885:intron 45.0%
GACATTCTCGTCTTCAACAC+CGG - chr8.4:8094524-8094543 MS.gene051885:intron 45.0%
GGAGTTCGTATGAATGCACA+AGG - chr8.4:8094437-8094456 MS.gene051885:intron 45.0%
TAACTGGAACCTTCATTCCC+AGG + chr8.4:8095819-8095838 None:intergenic 45.0%
TCTCATTTCCTTGTGAGGGA+GGG - chr8.4:8094416-8094435 MS.gene051885:intron 45.0%
TGCTCTTGCCAAAGACAGAT+GGG + chr8.4:8095888-8095907 None:intergenic 45.0%
TGCTGAATCTTTGACAGAGG+TGG - chr8.4:8095688-8095707 MS.gene051885:intron 45.0%
TGCTGCTGAATCTTTGACAG+AGG - chr8.4:8095685-8095704 MS.gene051885:intron 45.0%
TGGAGTTGAGGCATACAGAA+AGG - chr8.4:8095050-8095069 MS.gene051885:intron 45.0%
TGTCTGGAAATCAATGGCTG+AGG - chr8.4:8095322-8095341 MS.gene051885:intron 45.0%
! CACACAGAATGGACTCGAAT+TGG + chr8.4:8093794-8093813 None:intergenic 45.0%
! GTCTTTGGCAAGAGCATAAC+AGG - chr8.4:8095892-8095911 MS.gene051885:intron 45.0%
! TTTGGCAAGAGCATAACAGG+TGG - chr8.4:8095895-8095914 MS.gene051885:intron 45.0%
!! AGGTTTATTTCTGCGAGTGG+AGG - chr8.4:8092831-8092850 MS.gene051885:CDS 45.0%
!! GATAGTGGAAGAAGTGATCC+TGG - chr8.4:8095798-8095817 MS.gene051885:intron 45.0%
ATCGAACTAAACGACGCCTG+CGG + chr8.4:8092809-8092828 None:intergenic 50.0%
ATGAGGTTTCCAGCGCCATT+TGG + chr8.4:8092583-8092602 None:intergenic 50.0%
CTTTGACAGAGGTGGAGACT+GGG - chr8.4:8095696-8095715 MS.gene051885:intron 50.0%
GATGGTCACCCATCTGTCTT+TGG - chr8.4:8095877-8095896 MS.gene051885:intron 50.0%
GCTCATGGAAAAACTGCTCG+AGG - chr8.4:8094557-8094576 MS.gene051885:intron 50.0%
GGAAAAACTGCTCGAGGGTT+AGG - chr8.4:8094563-8094582 MS.gene051885:intron 50.0%
GGCCCTCGGTAGAAATAAAC+TGG + chr8.4:8095215-8095234 None:intergenic 50.0%
GTGTGTACTTCGTGAAGGCT+TGG - chr8.4:8093809-8093828 MS.gene051885:intron 50.0%
TCTTTGACAGAGGTGGAGAC+TGG - chr8.4:8095695-8095714 MS.gene051885:intron 50.0%
! AAATGGCGCTGGAAACCTCA+TGG - chr8.4:8092582-8092601 MS.gene051885:CDS 50.0%
! GCAAGAGCATAACAGGTGGA+AGG - chr8.4:8095899-8095918 MS.gene051885:intron 50.0%
! GGCGTCGTTTAGTTCGATTC+AGG - chr8.4:8092811-8092830 MS.gene051885:CDS 50.0%
!! AGTTGGAGGAGCACTTGTGA+TGG - chr8.4:8093124-8093143 MS.gene051885:intron 50.0%
!!! AGATTTTGGAGCGCTTGAGC+AGG - chr8.4:8094364-8094383 MS.gene051885:intron 50.0%
CAGATGGGTGACCATCCTTG+CGG + chr8.4:8095873-8095892 None:intergenic 55.0%
GAAAGTCTCCATGAAGCGGC+AGG - chr8.4:8095921-8095940 MS.gene051885:intron 55.0%
GAATGTCAGCCCTCTTCCAG+CGG + chr8.4:8094511-8094530 None:intergenic 55.0%
GACTCAGGTGGGTCATGCTA+CGG - chr8.4:8095718-8095737 MS.gene051885:intron 55.0%
GTACCCCAGGAAGACACCAA+TGG + chr8.4:8095954-8095973 None:intergenic 55.0%
TACGAACTCCCTCCCTCACA+AGG + chr8.4:8094427-8094446 None:intergenic 55.0%
TTCCATGCATCAGGTACCCC+AGG + chr8.4:8095967-8095986 None:intergenic 55.0%
TTGACAAGACGTCCAACCGC+TGG - chr8.4:8094492-8094511 MS.gene051885:intron 55.0%
! CAGCCATTGGTGTCTTCCTG+GGG - chr8.4:8095948-8095967 MS.gene051885:CDS 55.0%
! GCAGCCATTGGTGTCTTCCT+GGG - chr8.4:8095947-8095966 MS.gene051885:CDS 55.0%
! TGCAGCCATTGGTGTCTTCC+TGG - chr8.4:8095946-8095965 MS.gene051885:CDS 55.0%
! TTCCTGGGGTACCTGATGCA+TGG - chr8.4:8095962-8095981 MS.gene051885:CDS 55.0%
AGACGTCCAACCGCTGGAAG+AGG - chr8.4:8094498-8094517 MS.gene051885:intron 60.0%
AGAGGTGGAGACTGGGACTC+AGG - chr8.4:8095703-8095722 MS.gene051885:intron 60.0%
GACGTCCAACCGCTGGAAGA+GGG - chr8.4:8094499-8094518 MS.gene051885:intron 60.0%
GTGGAGACTGGGACTCAGGT+GGG - chr8.4:8095707-8095726 MS.gene051885:intron 60.0%
TCGTCTTCAACACCGGGCAC+TGG - chr8.4:8094531-8094550 MS.gene051885:intron 60.0%
!! CTTCAACACCGGGCACTGGT+GGG - chr8.4:8094535-8094554 MS.gene051885:intron 60.0%
!! TCTTCAACACCGGGCACTGG+TGG - chr8.4:8094534-8094553 MS.gene051885:intron 60.0%
AGCGGCAGGACTGCAGCCAT+TGG - chr8.4:8095935-8095954 MS.gene051885:intron 65.0%
GGTGGAGACTGGGACTCAGG+TGG - chr8.4:8095706-8095725 MS.gene051885:intron 65.0%
GTCAGCCCTCTTCCAGCGGT+TGG + chr8.4:8094507-8094526 None:intergenic 65.0%
TCCATGAGCCCACCAGTGCC+CGG + chr8.4:8094546-8094565 None:intergenic 65.0%
! GCTGCAGTCCTGCCGCTTCA+TGG + chr8.4:8095932-8095951 None:intergenic 65.0%
!! ACCGGGCACTGGTGGGCTCA+TGG - chr8.4:8094542-8094561 MS.gene051885:intron 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 8092556 8096038 8092556 ID=MS.gene051885
chr8.4 mRNA 8092556 8096038 8092556 ID=MS.gene051885.t1;Parent=MS.gene051885
chr8.4 exon 8095944 8096038 8095944 ID=MS.gene051885.t1.exon1;Parent=MS.gene051885.t1
chr8.4 CDS 8095944 8096038 8095944 ID=cds.MS.gene051885.t1;Parent=MS.gene051885.t1
chr8.4 exon 8094686 8094878 8094686 ID=MS.gene051885.t1.exon2;Parent=MS.gene051885.t1
chr8.4 CDS 8094686 8094878 8094686 ID=cds.MS.gene051885.t1;Parent=MS.gene051885.t1
chr8.4 exon 8094015 8094208 8094015 ID=MS.gene051885.t1.exon3;Parent=MS.gene051885.t1
chr8.4 CDS 8094015 8094208 8094015 ID=cds.MS.gene051885.t1;Parent=MS.gene051885.t1
chr8.4 exon 8093431 8093589 8093431 ID=MS.gene051885.t1.exon4;Parent=MS.gene051885.t1
chr8.4 CDS 8093431 8093589 8093431 ID=cds.MS.gene051885.t1;Parent=MS.gene051885.t1
chr8.4 exon 8092556 8092889 8092556 ID=MS.gene051885.t1.exon5;Parent=MS.gene051885.t1
chr8.4 CDS 8092556 8092889 8092556 ID=cds.MS.gene051885.t1;Parent=MS.gene051885.t1
Gene Sequence

>MS.gene051885

ATGGAAGGAATGATACTCATTATACCAAATGGCGCTGGAAACCTCATGGATGTGATCTTCCAAGGTCACTCTCTAATGAATTTCTTAATCGATTTGTTTGTTCCGTTTGTGATGTCATTTTCAACTATTTGCATGTAGCTGTGTTTATGTTTGATTAGTTCATTTGTTCAATGTGATGTTCATAAATAGGATTCAAGGAATTTGGTTTGATTTAGGGATAAAACATGCTACTATTTATTAAACGGTGTTACCGCAGGCGTCGTTTAGTTCGATTCAGGTTTATTTCTGCGAGTGGAGGAACAACTTGATAGTTAGTATACAACCCTTGACAATCAAATCGCGTTATTGCGCTGGTCATTGTTAAGATTTGAATCCATTAGAGAAGGCTGTTGAATAATCTAAAGAAATTATTTACCATGTTTGCGGTGGATTAAATTAAATTCTGGGTAATATAGAGCCTTGAGTTCAATGTTGGGAAAAAGTGTAAATGTTATCATGATAATAATGAGTGGACAGGGCAAGATGTTGATTAGAAACGAGAAATTGTAAATAAAAGCATTATGCAGAAAGTTGGAGGAGCACTTGTGATGGAAAAGAAGTTACATACCGTCTTAAGTTATTTAGACAGGAATGAAGAATACATGTAAGCGCTGCATTATAGAGGGAAGATTGGATTGGTAGTAGATAGTTCGGTAACTGTTGATAAATGGAGACTAATGAAAACTATATGTCAAATGATTAAGATGGATTTGGATTTAAATGAATTTTTAGTATCATGACTTTAGCTTCAAGCTAATTCAAATTGAAGAGCTCCAGGAATCATACTCAAACCCATGAAAATTGAAAAGCATGATCAACTAGTTAGCCGTGTTCCTTCAAAACTTACTGTGTTTTGCCAGCAATTTTTCAGGAATTGACCATTCTATTTGTGGAAACAATTTTAAACTTGTGGGTACATTTATGAAAAGTTTCAAGCATAGCTTCTTTTGATGTGGTGAGAAAAATTAAGTTGTTGTCTAGCAAATGACAAAAATAGCAAAAGAGTCATAATTCAATAGTGTTTTTCAAACATCTACCCTTTGCTTCTCAGCTGTTAGTAGTTTGCTGTAAAGTTAGTTATTTACATTTTCTCCGTCCACTTCTTTCACATATTACTGTAGGTTTAGTGCCAAGGACTTTTTGGCAAGACTGAAAGGTAAACAACTAATGCTGGTAGGAGATTCTATGAACCGAAACCAATTCGAGTCCATTCTGTGTGTACTTCGTGAAGGCTTGGACAATAAGAGCAAAATGTATGAGATACATGGTCACACAATATCTAAAGGAAGAGGCTACTTTGTTTTCAAATTTGAGGTGATTTTTTTCTTTTACTTTTCAATCATTTTTTGTTTGAAACACTTTTTCTCTTTCAATGAAATGTTGTTATTTAGCAAAAAGTGCCAATTACATGAACTACTTATTATTTTCTTTTAGAAAAAAGTATATTTTTTCAGTAATCTATTCACTTTCTTTGTAAGTTTGTCTCTTCAAGGTTTGATGGGCTTGAATAAAAAATGTTTGCAAATTTTAATCTAGCTTGTGCTATTATTATTATTATATAATTTCGTTTCTTCTCCCAGAAAATGACATTGAATTCATCTCTCTTTGAAGCTATCAGTTCGTAACTTATAAAGTACTGTCTATATTTTGGTAGTTGTATGAAATGTAAAATATGAAAATACTTACAAAATGATTAAGGTAGCTGCACTCCATCATTTCCCTGTGAAAATAATAAAATCTGGATGGGCACACTGCTGTTCATTATGCTAAGATTTTGGAGCGCTTGAGCAGGACTATGATTGTACGGTGTCATTTGTGAGATCTCATTTCCTTGTGAGGGAGGGAGTTCGTATGAATGCACAAGGGAGTTCAAATCCTACATTGTCAATAGATCGGATTGACAAGACGTCCAACCGCTGGAAGAGGGCTGACATTCTCGTCTTCAACACCGGGCACTGGTGGGCTCATGGAAAAACTGCTCGAGGGTTAGGATACAATTATTTCATATTTCATATTTTGATTGTGTACATTCAATTCAGGAAACTGGATGTGCGAGTTTGTTTGTCTCCCCCATGTTTATTGAATTCTAACATGGTCAAAAAATAAAAAGGATTCATCTAAGTATTTGCTGCACTAGACTATTGACCTATATTTGTAACTTCTCTTGGCAACAACGAATGTTCGCACACACTATTCTATCAACCGATTATATGTATTAGGCAAGATTTGACACTGTTGTCTAACATGTTTATCTTGTTAAATTTTGGTTTTTTTCCCTTTCACAAATTAGTTTTTATTCCCTGCTATGTGGTTTGTCTTTCATTCCATAAAATTAACAAGTCGTCTGTCAAAAATAAACAATGGGAATAATTTTTATAATTATATTAAATACTTTGTATGATTTCTGCAGAATAAATTACTATAAAGAAGGTGATTATCTATATCCAAAATTTGATGGAGTTGAGGCATACAGAAAGGCTATAAAGACATGGGGAAAATGGATCGACAATAATATCAATCCAAAAAAGCAGATTGTCTACTATCGTGGATATTCTTCTGCTCATTTCAGGTATCAATGTTTTTTAAGATATTTTTCTGATGCTTCCTTGTCCGTTTTCCAGTTTATTTCTACCGAGGGCCTCGTATTTTGTAAAAATTTTAAAAGATTTAGCTACTTTTAGGTGAAGATTAGAGTGCACTCTAGCGAGAAAATACAGTTATAACTATTGTCTGGAAATCAATGGCTGAGGTTTTATGAAAAGTGAAAACACAGTACACATATAGCAAACCATGAAGTTGAAAATCACTTAGTTGACTTGCAAATCATTAGTTATAATTTCACACTTTTCTATCTAAAATGCACCCTTTCACTTTAGAACGGCTAAATTTAGTAAACGAAATCAAAACCTTATATTCCAACATCATTATGGAGAATAGGAAAGTGGAATAGAGAAATGCTAGCAAGTAGCAGTATACTCTCGAGCACATTTTTTTCAAATAATAAAAAGTATGCTGCTATCATTCCTCAAATAGAAAGGAGAAAAAACTAATTGTACACCACTACTAATTGCTCCATAAGTCATATCATATTGCTGCTGAATCTTTGACAGAGGTGGAGACTGGGACTCAGGTGGGTCATGCTACGGTGAAACTGAACCAGTTTTAAATGGGTCCATCCTGAATAACTATCCTTTGAAAATGAAGATAGTGGAAGAAGTGATCCTGGGAATGAAGGTTCCAGTTAAATTACTAAATGTAACAAAGCTGACTAATTTCCGCAAGGATGGTCACCCATCTGTCTTTGGCAAGAGCATAACAGGTGGAAGGAAAGTCTCCATGAAGCGGCAGGACTGCAGCCATTGGTGTCTTCCTGGGGTACCTGATGCATGGAATGAGCTAATTTATGCCACTTTGGTTTTGCAACAGACAAATTCAAGGAATTGA

Protein sequence

>MS.gene051885.t1

MEGMILIIPNGAGNLMDVIFQGHSLMNFLIDLFSAKDFLARLKGKQLMLVGDSMNRNQFESILCVLREGLDNKSKMYEIHGHTISKGRGYFVFKFEDYDCTVSFVRSHFLVREGVRMNAQGSSNPTLSIDRIDKTSNRWKRADILVFNTGHWWAHGKTARGINYYKEGDYLYPKFDGVEAYRKAIKTWGKWIDNNINPKKQIVYYRGYSSAHFRGGDWDSGGSCYGETEPVLNGSILNNYPLKMKIVEEVILGMKVPVKLLNVTKLTNFRKDGHPSVFGKSITGGRKVSMKRQDCSHWCLPGVPDAWNELIYATLVLQQTNSRN