AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72319

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72319.t1 MTR_1g060520 82.203 354 32 1 1 354 1 323 0.0 597
MS.gene72319.t1 MTR_1g060500 81.058 359 63 2 1 354 1 359 0.0 563
MS.gene72319.t1 MTR_1g060490 76.271 354 78 3 1 354 1 348 0.0 541
MS.gene72319.t1 MTR_7g104220 61.709 316 114 6 40 352 42 353 8.69e-140 401
MS.gene72319.t1 MTR_1g092740 49.038 312 144 6 40 345 38 340 1.22e-100 301
MS.gene72319.t1 MTR_1g092690 42.296 331 177 5 20 345 31 352 2.01e-89 273
MS.gene72319.t1 MTR_1g092760 42.857 322 170 5 38 354 37 349 4.64e-87 266
MS.gene72319.t1 MTR_1g092750 43.396 318 164 6 35 345 35 343 3.09e-85 262
MS.gene72319.t1 MTR_1g060530 84.524 84 13 0 181 264 31 114 5.31e-45 151
MS.gene72319.t1 MTR_2g044100 31.464 321 177 12 41 334 44 348 1.19e-36 137
MS.gene72319.t1 MTR_8g022810 26.966 356 226 13 9 344 14 355 2.26e-33 127
MS.gene72319.t1 MTR_8g031390 28.818 347 210 13 8 336 10 337 3.94e-33 127
MS.gene72319.t1 MTR_8g031400 30.159 315 187 12 41 336 38 338 6.84e-32 123
MS.gene72319.t1 MTR_8g022790 28.409 352 201 14 8 334 7 332 3.79e-30 118
MS.gene72319.t1 MTR_8g031390 29.712 313 189 12 13 305 8 309 1.82e-29 115
MS.gene72319.t1 MTR_3g098270 29.063 320 189 14 41 335 35 341 1.77e-28 114
MS.gene72319.t1 MTR_8g031430 28.981 314 192 13 41 336 38 338 1.48e-27 111
MS.gene72319.t1 MTR_1g092710 35.204 196 94 7 153 345 3 168 2.26e-27 106
MS.gene72319.t1 MTR_3g005660 27.673 318 194 10 41 334 37 342 2.24e-26 108
MS.gene72319.t1 MTR_4g035353 26.346 353 215 14 15 340 11 345 8.55e-26 106
MS.gene72319.t1 MTR_3g052580 26.300 327 205 15 41 344 29 342 1.18e-25 106
MS.gene72319.t1 MTR_3g052580 26.300 327 205 15 41 344 28 341 1.82e-25 106
MS.gene72319.t1 MTR_5g009100 28.125 320 183 13 42 333 48 348 4.27e-25 105
MS.gene72319.t1 MTR_1g025760 26.005 373 244 15 1 353 42 402 1.57e-24 103
MS.gene72319.t1 MTR_5g074270 28.012 332 198 16 41 345 34 351 1.65e-24 103
MS.gene72319.t1 MTR_8g031420 26.346 353 226 12 1 336 1 336 1.83e-24 102
MS.gene72319.t1 MTR_3g052480 26.300 327 207 14 41 344 34 349 4.04e-24 102
MS.gene72319.t1 MTR_3g082830 28.443 334 208 14 41 354 39 361 4.65e-24 101
MS.gene72319.t1 MTR_3g114090 26.453 344 220 15 28 351 26 356 1.71e-23 100
MS.gene72319.t1 MTR_5g084770 27.381 336 200 15 41 349 29 347 2.35e-23 99.8
MS.gene72319.t1 MTR_2g017965 28.349 321 186 16 41 338 34 333 2.62e-23 99.8
MS.gene72319.t1 MTR_3g052490 25.228 329 207 16 41 344 33 347 7.00e-23 98.6
MS.gene72319.t1 MTR_0009s0250 27.302 315 198 13 41 341 34 331 1.05e-22 97.8
MS.gene72319.t1 MTR_5g084790 27.441 379 224 17 1 353 1 354 1.39e-22 97.4
MS.gene72319.t1 MTR_1g079530 27.536 345 202 16 11 334 9 326 1.48e-22 97.4
MS.gene72319.t1 MTR_8g075230 25.843 356 232 13 5 340 2 345 3.24e-22 96.7
MS.gene72319.t1 MTR_5g084750 25.291 344 225 13 10 334 3 333 4.34e-22 96.3
MS.gene72319.t1 MTR_3g024510 23.851 348 227 12 10 336 12 342 4.52e-22 96.3
MS.gene72319.t1 MTR_1g079540 23.691 363 227 14 9 344 5 344 1.65e-21 94.7
MS.gene72319.t1 MTR_2g033930 26.433 314 203 12 41 336 33 336 2.28e-21 94.4
MS.gene72319.t1 MTR_7g116870 26.048 334 197 13 39 336 32 351 3.18e-21 94.0
MS.gene72319.t1 MTR_2g084585 26.205 332 214 11 41 352 31 351 4.45e-21 93.2
MS.gene72319.t1 MTR_1g025720 25.683 366 233 16 9 354 9 355 5.51e-21 93.2
MS.gene72319.t1 MTR_4g104240 26.171 363 226 13 7 342 10 357 6.82e-21 93.2
MS.gene72319.t1 MTR_2g033920 27.673 318 194 13 42 336 37 341 1.00e-20 92.4
MS.gene72319.t1 MTR_8g022810 24.859 354 183 13 9 344 14 302 2.07e-20 90.9
MS.gene72319.t1 MTR_2g015080 26.776 366 216 18 6 341 14 357 2.15e-20 91.7
MS.gene72319.t1 MTR_7g116520 26.019 319 199 14 39 334 33 337 2.22e-20 91.7
MS.gene72319.t1 MTR_1g069175 24.930 357 232 14 9 344 7 348 2.69e-20 91.3
MS.gene72319.t1 MTR_0565s0010 26.332 319 196 13 42 336 34 337 3.17e-20 90.9
MS.gene72319.t1 MTR_1g025680 26.316 342 217 16 15 335 11 338 4.07e-20 91.7
MS.gene72319.t1 MTR_3g005650 25.220 341 210 14 15 335 14 329 9.14e-20 89.7
MS.gene72319.t1 MTR_8g028160 24.118 340 200 11 39 336 35 358 1.01e-19 89.7
MS.gene72319.t1 MTR_8g079050 23.529 323 205 13 42 335 39 348 1.08e-19 89.7
MS.gene72319.t1 MTR_2g015670 25.959 339 198 13 36 344 27 342 2.00e-19 88.6
MS.gene72319.t1 MTR_2g015580 24.545 330 214 12 39 340 46 368 3.19e-19 88.6
MS.gene72319.t1 MTR_1g025910 26.101 318 206 11 45 344 41 347 3.62e-19 88.2
MS.gene72319.t1 MTR_3g021460 26.282 312 193 11 41 335 32 323 4.70e-19 87.4
MS.gene72319.t1 MTR_1g025700 23.823 361 242 13 10 351 23 369 5.50e-19 87.4
MS.gene72319.t1 MTR_5g078210 24.383 324 207 12 42 343 27 334 1.00e-18 86.7
MS.gene72319.t1 MTR_7g008060 23.967 363 214 13 8 344 7 333 1.37e-18 86.3
MS.gene72319.t1 MTR_4g056160 26.250 320 198 13 41 335 28 334 2.04e-18 85.5
MS.gene72319.t1 MTR_8g074560 26.781 351 211 18 13 334 6 339 2.42e-18 85.5
MS.gene72319.t1 MTR_2g017955 25.538 325 193 11 41 340 34 334 2.82e-18 85.5
MS.gene72319.t1 MTR_5g083040 24.242 330 214 10 38 342 30 348 2.93e-18 85.1
MS.gene72319.t1 MTR_2g461580 24.465 327 209 11 41 350 32 337 3.67e-18 84.7
MS.gene72319.t1 MTR_7g116500 23.810 357 226 14 1 333 1 335 3.68e-18 85.1
MS.gene72319.t1 MTR_4g108690 24.695 328 212 12 42 347 29 343 4.21e-18 84.7
MS.gene72319.t1 MTR_5g022630 25.575 348 224 14 13 338 18 352 4.96e-18 84.7
MS.gene72319.t1 MTR_3g435540 23.692 325 219 10 42 347 25 339 5.37e-18 84.3
MS.gene72319.t1 MTR_7g116510 24.047 341 218 15 39 354 24 348 5.70e-18 84.3
MS.gene72319.t1 MTR_6g021530 23.529 357 227 16 13 344 8 343 1.23e-17 83.6
MS.gene72319.t1 MTR_1g025780 22.892 332 225 12 41 353 42 361 1.44e-17 83.2
MS.gene72319.t1 MTR_4g087985 23.743 358 228 14 10 341 15 353 1.72e-17 83.2
MS.gene72319.t1 MTR_3g464730 25.449 334 217 13 41 353 29 351 3.45e-17 82.0
MS.gene72319.t1 MTR_3g069780 27.035 344 198 18 37 344 27 353 6.86e-17 81.3
MS.gene72319.t1 MTR_7g033150 23.784 370 236 13 13 344 7 368 1.48e-16 80.5
MS.gene72319.t1 MTR_5g022640 24.058 345 232 12 13 338 18 351 1.81e-16 80.1
MS.gene72319.t1 MTR_1g024890 22.866 328 224 12 36 344 28 345 1.98e-16 80.1
MS.gene72319.t1 MTR_4g056280 24.451 319 202 10 41 335 31 334 2.40e-16 79.7
MS.gene72319.t1 MTR_2g017925 25.796 314 193 11 41 335 34 326 3.06e-16 79.3
MS.gene72319.t1 MTR_7g116570 23.876 356 217 14 8 334 7 337 3.70e-16 79.3
MS.gene72319.t1 MTR_8g087890 24.465 327 191 14 42 336 33 335 3.84e-16 79.0
MS.gene72319.t1 MTR_2g015590 24.242 330 204 12 41 336 32 349 4.24e-16 79.0
MS.gene72319.t1 MTR_7g111780 24.762 315 207 8 41 336 37 340 4.28e-16 79.0
MS.gene72319.t1 MTR_3g023220 26.019 319 184 14 41 335 34 324 6.58e-16 78.2
MS.gene72319.t1 MTR_2g015650 24.523 367 229 12 13 344 3 356 6.92e-16 78.6
MS.gene72319.t1 MTR_7g087190 23.662 355 221 15 28 344 33 375 1.43e-15 77.8
MS.gene72319.t1 MTR_1g030275 23.978 367 221 15 17 344 18 365 2.71e-15 76.6
MS.gene72319.t1 MTR_3g438030 26.453 344 200 18 37 344 27 353 5.40e-15 75.9
MS.gene72319.t1 MTR_2g015630 22.515 342 208 11 45 346 36 360 7.50e-15 75.5
MS.gene72319.t1 MTR_3g069520 26.254 339 197 17 37 340 27 347 1.27e-14 74.7
MS.gene72319.t1 MTR_1g030268 22.751 378 240 13 4 345 6 367 2.16e-14 73.9
MS.gene72319.t1 MTR_8g087870 23.676 321 189 13 41 334 30 321 2.28e-14 73.6
MS.gene72319.t1 MTR_2g043980 24.047 341 206 12 28 340 24 339 3.94e-14 73.2
MS.gene72319.t1 MTR_3g114120 25.309 324 206 13 41 344 48 355 4.23e-14 73.2
MS.gene72319.t1 MTR_2g100620 24.405 336 216 11 41 352 32 353 4.94e-14 72.8
MS.gene72319.t1 MTR_2g015590 27.049 244 144 10 41 255 32 270 1.24e-13 71.6
MS.gene72319.t1 MTR_2g079080 24.545 330 200 14 39 340 29 337 1.38e-13 71.6
MS.gene72319.t1 MTR_0029s0100 24.545 330 200 14 39 340 29 337 1.78e-13 71.2
MS.gene72319.t1 MTR_3g463960 22.647 340 213 13 37 340 41 366 2.26e-13 70.9
MS.gene72319.t1 MTR_3g463950 22.647 340 213 13 37 340 41 366 2.26e-13 70.9
MS.gene72319.t1 MTR_3g463970 22.647 340 213 13 37 340 41 366 2.26e-13 70.9
MS.gene72319.t1 MTR_3g463940 22.647 340 213 13 37 340 41 366 2.26e-13 70.9
MS.gene72319.t1 MTR_5g078210 25.630 238 148 8 42 257 27 257 4.82e-13 69.7
MS.gene72319.t1 MTR_2g079090 24.545 330 200 14 39 340 29 337 4.91e-13 69.7
MS.gene72319.t1 MTR_0029s0050 24.242 330 201 14 39 340 29 337 5.33e-13 69.7
MS.gene72319.t1 MTR_6g007095 21.858 366 242 12 1 334 1 354 1.48e-12 69.3
MS.gene72319.t1 MTR_7g113860 23.429 350 215 13 33 344 24 358 5.54e-12 66.6
MS.gene72319.t1 MTR_8g038680 21.726 336 220 10 37 336 20 348 2.79e-11 64.7
MS.gene72319.t1 MTR_7g033165 24.024 333 204 14 41 336 34 354 3.08e-11 64.3
MS.gene72319.t1 MTR_1g082390 25.275 364 209 17 9 335 13 350 8.04e-11 63.2
MS.gene72319.t1 MTR_2g017875 24.169 331 203 15 41 342 35 346 9.65e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72319.t1 AT5G03610 51.412 354 160 7 1 346 1 350 3.04e-117 344
MS.gene72319.t1 AT3G09930 48.562 313 151 6 40 346 39 347 3.49e-103 308
MS.gene72319.t1 AT3G09930 48.562 313 151 6 40 346 39 347 3.49e-103 308
MS.gene72319.t1 AT5G03600 39.942 343 178 11 11 344 23 346 5.79e-74 233
MS.gene72319.t1 AT5G03600 40.432 324 170 10 30 344 2 311 1.48e-72 228
MS.gene72319.t1 AT2G36325 36.857 350 199 12 8 344 10 350 1.17e-67 217
MS.gene72319.t1 AT5G03590 34.564 298 144 8 55 346 1 253 2.04e-55 182
MS.gene72319.t1 AT5G03590 30.201 298 126 8 55 346 1 222 2.24e-42 147
MS.gene72319.t1 AT5G03590 40.206 194 106 6 9 199 7 193 2.27e-38 136
MS.gene72319.t1 AT1G53920 28.212 358 230 12 8 348 18 365 3.54e-34 130
MS.gene72319.t1 AT5G41890 27.500 320 203 10 42 336 33 348 6.73e-30 118
MS.gene72319.t1 AT1G58430 28.701 331 199 12 41 347 36 353 2.96e-29 116
MS.gene72319.t1 AT2G31540 27.381 336 209 11 35 345 26 351 5.07e-29 115
MS.gene72319.t1 AT2G40250 26.667 330 203 12 37 340 33 349 3.61e-28 113
MS.gene72319.t1 AT2G30310 26.359 368 234 13 1 347 1 352 4.16e-28 112
MS.gene72319.t1 AT1G54020 29.107 347 202 16 7 339 9 325 7.87e-28 112
MS.gene72319.t1 AT1G20130 28.869 336 203 13 41 350 185 510 8.92e-28 114
MS.gene72319.t1 AT1G20130 28.869 336 203 13 41 350 205 530 1.13e-27 114
MS.gene72319.t1 AT5G08460 25.978 358 227 13 1 335 15 357 8.94e-27 109
MS.gene72319.t1 AT5G40990 29.245 318 190 13 41 334 38 344 1.13e-26 109
MS.gene72319.t1 AT1G20120 28.527 319 193 15 41 337 79 384 1.80e-26 109
MS.gene72319.t1 AT1G33811 27.324 355 212 15 8 334 6 342 1.48e-25 106
MS.gene72319.t1 AT1G54000 26.822 343 220 13 1 331 2 325 2.13e-25 105
MS.gene72319.t1 AT2G24560 25.140 358 235 13 11 347 7 352 1.04e-24 103
MS.gene72319.t1 AT3G14225 30.063 316 190 14 41 334 38 344 1.19e-24 103
MS.gene72319.t1 AT2G04570 28.440 327 197 15 41 344 29 341 1.30e-24 103
MS.gene72319.t1 AT1G75890 27.841 352 210 14 12 337 21 354 3.32e-24 102
MS.gene72319.t1 AT1G28640 27.557 352 215 13 14 335 11 352 4.45e-24 102
MS.gene72319.t1 AT1G54010 27.299 348 218 15 1 334 2 328 6.51e-24 101
MS.gene72319.t1 AT1G75890 27.841 352 210 14 12 337 50 383 6.70e-24 102
MS.gene72319.t1 AT4G10950 27.083 336 201 15 41 350 72 389 6.93e-24 102
MS.gene72319.t1 AT2G30220 25.532 329 212 11 41 347 34 351 1.80e-23 100
MS.gene72319.t1 AT3G14225 29.375 320 191 14 41 334 38 348 1.85e-23 100
MS.gene72319.t1 AT5G18430 26.791 321 196 12 39 334 27 333 1.87e-23 100
MS.gene72319.t1 AT1G75900 25.967 362 232 14 13 353 18 364 2.20e-23 100
MS.gene72319.t1 AT1G71250 25.714 350 214 15 9 334 17 344 4.01e-23 99.4
MS.gene72319.t1 AT3G14820 26.347 334 219 11 30 347 22 344 6.73e-23 98.6
MS.gene72319.t1 AT1G71691 26.480 321 187 14 41 334 56 354 7.88e-23 98.6
MS.gene72319.t1 AT1G20132 25.223 337 223 12 35 352 56 382 9.86e-23 98.6
MS.gene72319.t1 AT1G75880 27.123 365 236 13 6 351 19 372 2.03e-22 97.4
MS.gene72319.t1 AT1G20135 25.797 345 215 12 13 340 6 326 3.98e-22 95.9
MS.gene72319.t1 AT4G10950 26.190 336 200 15 41 350 72 385 7.58e-22 95.9
MS.gene72319.t1 AT1G75890 26.575 365 211 14 12 337 21 367 9.80e-22 95.5
MS.gene72319.t1 AT1G06990 25.749 334 210 12 41 350 38 357 1.02e-21 95.1
MS.gene72319.t1 AT1G75880 27.198 364 235 12 8 351 20 373 1.07e-21 95.5
MS.gene72319.t1 AT5G42170 24.611 321 214 10 41 344 51 360 1.12e-21 95.1
MS.gene72319.t1 AT1G54030 26.537 309 191 11 38 334 50 334 1.21e-21 95.5
MS.gene72319.t1 AT2G19060 26.603 312 202 12 42 340 32 329 1.82e-21 94.4
MS.gene72319.t1 AT3G14210 25.641 312 204 13 37 334 33 330 2.89e-21 94.4
MS.gene72319.t1 AT5G22810 27.003 337 208 11 41 352 35 358 4.89e-21 93.2
MS.gene72319.t1 AT1G28650 24.513 359 233 12 11 340 10 359 5.88e-21 93.2
MS.gene72319.t1 AT3G50400 24.224 322 207 11 42 336 36 347 5.89e-21 93.2
MS.gene72319.t1 AT3G48460 28.319 339 199 13 33 340 31 356 6.74e-21 93.2
MS.gene72319.t1 AT3G53100 25.000 332 218 12 41 352 30 350 1.89e-20 91.7
MS.gene72319.t1 AT2G03980 25.397 315 200 14 41 334 44 344 2.44e-20 91.3
MS.gene72319.t1 AT2G03980 25.397 315 200 14 41 334 44 344 2.44e-20 91.3
MS.gene72319.t1 AT2G03980 25.397 315 200 14 41 334 44 344 2.44e-20 91.3
MS.gene72319.t1 AT2G03980 25.397 315 200 14 41 334 44 344 2.44e-20 91.3
MS.gene72319.t1 AT5G33370 24.620 329 213 14 38 344 28 343 4.15e-20 90.9
MS.gene72319.t1 AT4G01130 26.230 366 205 14 13 336 14 356 4.36e-20 90.9
MS.gene72319.t1 AT1G75930 24.167 360 218 13 4 340 3 330 7.64e-20 89.7
MS.gene72319.t1 AT1G53940 24.860 358 233 13 1 334 1 346 7.88e-20 90.1
MS.gene72319.t1 AT2G27360 24.260 338 207 11 39 340 32 356 7.94e-20 90.1
MS.gene72319.t1 AT5G45950 25.414 362 237 13 8 352 6 351 1.16e-19 89.4
MS.gene72319.t1 AT3G14220 26.380 326 190 14 41 342 33 332 2.03e-19 88.6
MS.gene72319.t1 AT5G15720 25.155 322 202 14 38 334 28 335 2.13e-19 88.6
MS.gene72319.t1 AT1G71120 23.547 327 218 11 41 345 32 348 2.33e-19 88.6
MS.gene72319.t1 AT1G58520 23.699 346 209 12 34 352 24 341 2.61e-19 88.2
MS.gene72319.t1 AT1G58525 23.699 346 209 12 34 352 24 341 2.61e-19 88.2
MS.gene72319.t1 AT5G45960 26.126 333 213 11 36 345 43 365 2.99e-19 88.2
MS.gene72319.t1 AT2G23540 24.863 366 216 15 8 335 15 359 3.27e-19 88.2
MS.gene72319.t1 AT1G28670 25.208 361 229 13 11 340 8 358 4.46e-19 87.8
MS.gene72319.t1 AT1G29660 25.143 350 223 14 12 340 9 340 5.06e-19 87.4
MS.gene72319.t1 AT5G45670 24.765 319 199 12 42 335 31 333 8.50e-19 87.0
MS.gene72319.t1 AT1G73610 25.532 329 195 12 35 340 30 331 2.38e-18 85.5
MS.gene72319.t1 AT1G54030 28.326 233 140 8 38 258 50 267 3.02e-18 84.7
MS.gene72319.t1 AT5G33370 27.049 244 150 10 38 259 28 265 4.66e-18 84.3
MS.gene72319.t1 AT4G28780 26.409 337 201 16 36 344 27 344 9.91e-18 84.0
MS.gene72319.t1 AT5G55050 25.382 327 208 14 41 342 40 355 1.35e-17 83.6
MS.gene72319.t1 AT1G75920 25.344 363 218 16 4 344 3 334 1.97e-17 82.8
MS.gene72319.t1 AT2G19050 25.155 322 209 11 42 349 33 336 2.08e-17 82.8
MS.gene72319.t1 AT5G03810 26.036 338 210 13 40 352 30 352 2.33e-17 82.4
MS.gene72319.t1 AT3G04290 24.695 328 214 14 38 344 27 342 2.40e-17 82.8
MS.gene72319.t1 AT5G37690 22.293 314 213 10 42 336 29 330 3.21e-17 82.4
MS.gene72319.t1 AT1G29670 25.364 343 220 16 12 335 9 334 4.06e-17 82.0
MS.gene72319.t1 AT1G29670 25.291 344 221 16 12 336 77 403 5.18e-17 82.0
MS.gene72319.t1 AT2G19010 26.198 313 192 14 41 335 31 322 5.56e-17 81.3
MS.gene72319.t1 AT1G71691 26.766 269 160 11 40 284 55 310 5.83e-17 80.9
MS.gene72319.t1 AT1G28590 23.768 345 211 13 39 346 35 364 6.50e-17 81.6
MS.gene72319.t1 AT2G19010 25.879 313 193 13 41 335 61 352 6.55e-17 81.6
MS.gene72319.t1 AT1G28660 24.931 361 223 14 14 340 11 357 7.50e-17 81.3
MS.gene72319.t1 AT2G24560 25.000 300 200 11 11 290 7 301 8.68e-17 80.5
MS.gene72319.t1 AT1G53990 26.168 321 189 12 41 334 36 335 1.21e-16 80.5
MS.gene72319.t1 AT1G28610 23.631 347 208 14 39 346 30 358 1.48e-16 80.5
MS.gene72319.t1 AT1G28570 23.494 332 216 12 36 337 30 353 1.59e-16 80.5
MS.gene72319.t1 AT1G56670 24.611 321 210 8 41 340 41 350 2.52e-16 79.7
MS.gene72319.t1 AT1G54020 27.197 239 154 10 109 339 13 239 2.54e-16 78.6
MS.gene72319.t1 AT1G54020 27.197 239 154 10 109 339 13 239 2.54e-16 78.6
MS.gene72319.t1 AT1G54020 27.197 239 154 10 109 339 13 239 2.54e-16 78.6
MS.gene72319.t1 AT2G42990 24.928 345 212 15 13 334 11 331 2.70e-16 79.3
MS.gene72319.t1 AT1G28600 23.467 375 229 14 1 340 1 352 3.99e-16 79.3
MS.gene72319.t1 AT5G15720 26.296 270 170 12 38 284 28 291 7.64e-16 77.8
MS.gene72319.t1 AT1G28580 23.476 328 215 11 39 337 36 356 8.50e-16 78.2
MS.gene72319.t1 AT5G03820 26.036 338 209 14 41 352 34 356 8.81e-16 78.2
MS.gene72319.t1 AT5G03820 26.036 338 209 14 41 352 62 384 8.99e-16 78.2
MS.gene72319.t1 AT1G74460 23.547 327 217 11 42 347 25 339 1.48e-15 77.4
MS.gene72319.t1 AT5G45910 26.705 352 193 15 39 344 29 361 1.51e-15 77.4
MS.gene72319.t1 AT2G31550 23.881 201 137 6 153 345 18 210 3.80e-15 73.9
MS.gene72319.t1 AT1G31550 24.784 347 204 12 39 346 35 363 7.07e-15 75.5
MS.gene72319.t1 AT1G09390 23.546 361 224 10 8 340 11 347 9.92e-15 75.1
MS.gene72319.t1 AT4G26790 24.107 336 216 14 41 352 30 350 1.16e-14 74.7
MS.gene72319.t1 AT4G26790 24.107 336 216 14 41 352 30 350 1.16e-14 74.7
MS.gene72319.t1 AT2G19050 26.639 244 158 8 42 271 33 269 1.28e-14 73.6
MS.gene72319.t1 AT1G23500 23.077 312 207 8 41 337 36 329 2.13e-14 73.9
MS.gene72319.t1 AT4G01130 26.710 307 167 12 13 284 14 297 2.66e-14 73.6
MS.gene72319.t1 AT1G75910 23.889 360 216 14 13 344 5 334 4.64e-14 72.8
MS.gene72319.t1 AT1G75920 25.424 354 208 16 26 344 12 344 6.92e-14 72.4
MS.gene72319.t1 AT5G14450 23.876 356 224 15 15 336 20 362 1.07e-13 72.0
MS.gene72319.t1 AT1G53940 24.818 274 184 8 2 258 3 271 1.16e-13 71.2
MS.gene72319.t1 AT5G37690 21.975 314 206 11 42 336 29 322 1.30e-13 71.6
MS.gene72319.t1 AT3G43550 24.667 300 184 11 10 284 3 285 2.56e-13 70.1
MS.gene72319.t1 AT1G31550 25.072 347 200 14 39 346 35 360 3.16e-13 70.5
MS.gene72319.t1 AT1G67830 21.239 339 224 10 41 344 31 361 6.07e-13 69.7
MS.gene72319.t1 AT1G56670 24.390 246 161 4 41 267 41 280 2.24e-12 67.4
MS.gene72319.t1 AT1G54790 25.000 332 196 12 44 336 36 353 2.88e-12 67.8
MS.gene72319.t1 AT3G27950 23.224 366 223 14 16 344 10 354 4.74e-12 67.0
MS.gene72319.t1 AT3G62280 23.926 326 197 13 41 336 37 341 5.21e-12 66.6
MS.gene72319.t1 AT2G04020 24.171 211 142 6 41 237 44 250 6.95e-12 65.5
MS.gene72319.t1 AT1G75920 24.832 298 187 12 65 344 28 306 1.07e-11 65.5
MS.gene72319.t1 AT1G71691 23.358 274 163 13 86 334 2 253 1.41e-11 64.7
MS.gene72319.t1 AT2G04020 24.752 202 134 6 41 228 44 241 1.54e-11 65.1
MS.gene72319.t1 AT1G54020 28.796 191 118 9 157 339 10 190 2.38e-11 63.5

Find 79 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGATTTGAGTTGTCATATT+TGG 0.132567 1.4:-49614401 None:intergenic
ACATACTTCTAATAAATATT+TGG 0.172791 1.4:+49615687 MS.gene72319:CDS
TTGTTCTGCAGCCAAGTATT+TGG 0.230875 1.4:+49614256 MS.gene72319:intron
CACCAATCATTCACAAATTA+TGG 0.245602 1.4:+49614288 MS.gene72319:CDS
TGGTGTGTTCCTTTGTTTCT+TGG 0.252575 1.4:-49615528 None:intergenic
CCCGAACAGGATTTGAAGTA+TGG 0.259601 1.4:+49614326 MS.gene72319:CDS
ATATTGAATCAACTTTCTTT+TGG 0.261143 1.4:+49615719 MS.gene72319:CDS
ATTGCTTATGTCTCTGTTGC+TGG 0.296373 1.4:+49614482 MS.gene72319:CDS
TCAAACGTTCCTTAATGTTA+TGG 0.312425 1.4:-49615609 None:intergenic
CGGGGAAAGGTTATGCCATA+TGG 0.321705 1.4:-49614041 None:intergenic
CCCTTCTAGCCATAACATTA+AGG 0.338472 1.4:+49615600 MS.gene72319:CDS
GGCCACAGATGGCTCTCTTT+TGG 0.338487 1.4:+49614526 MS.gene72319:CDS
TCCTTAATGTTATGGCTAGA+AGG 0.339670 1.4:-49615601 None:intergenic
AATCATTGTTATAGGAGAAA+TGG 0.346542 1.4:+49613899 MS.gene72319:intron
ATCATTGTTATAGGAGAAAT+GGG 0.367353 1.4:+49613900 MS.gene72319:intron
TACCATAATTTGTGAATGAT+TGG 0.383106 1.4:-49614290 None:intergenic
ATCACTGATTCAATGAAAGA+TGG 0.393616 1.4:-49615313 None:intergenic
TAAAACCTATATCTGATTCA+TGG 0.400928 1.4:+49614012 MS.gene72319:CDS
CTGAGAGAAGTACAAGTAGT+AGG 0.402062 1.4:-49613583 None:intergenic
CCCATACTTCAAATCCTGTT+CGG 0.407942 1.4:-49614327 None:intergenic
CCATACTTCAAATCCTGTTC+GGG 0.419024 1.4:-49614326 None:intergenic
GCTTTGAAGATGAATCAAAT+TGG 0.427761 1.4:-49615350 None:intergenic
TGATCTCAATTCCAAATACT+TGG 0.431077 1.4:-49614267 None:intergenic
CTACTACTTGTACTTCTCTC+AGG 0.433980 1.4:+49613584 MS.gene72319:CDS
GGAGATTCGTATGTCGATAC+TGG 0.436729 1.4:+49613981 MS.gene72319:CDS
AGAGACATAAGCAATAGAAT+TGG 0.452863 1.4:-49614474 None:intergenic
GCTCTCCATGAATCAGATAT+AGG 0.462892 1.4:-49614017 None:intergenic
GGGGAAAGGTTATGCCATAT+GGG 0.463305 1.4:-49614040 None:intergenic
GTGGGTGATTTACAACCTCT+TGG 0.468023 1.4:+49615394 MS.gene72319:CDS
GGTTCAACTTCGTAACAGAT+TGG 0.473218 1.4:-49615507 None:intergenic
CATTCCAACCTGCTTGTGTT+GGG 0.480341 1.4:-49615753 None:intergenic
CATAACCTTTCCCCGAAAAC+CGG 0.480951 1.4:+49614049 MS.gene72319:CDS
TCTGCCGTCGGAGAATCTTC+CGG 0.488295 1.4:-49614072 None:intergenic
TAATAACATAGTGCCCGAAC+AGG 0.492960 1.4:+49614313 MS.gene72319:CDS
ACTATTGCAACTTTGAAATG+AGG 0.493039 1.4:-49615443 None:intergenic
AGGATTTAAGAGAATTGTTG+TGG 0.493326 1.4:+49615375 MS.gene72319:CDS
AACTTTGCATATGGTGGTAC+AGG 0.496157 1.4:+49614353 MS.gene72319:CDS
TTGATTCATCTTCAAAGCAT+AGG 0.497213 1.4:+49615355 MS.gene72319:CDS
GATTCATGGAGAGCCCCATA+TGG 0.498775 1.4:+49614026 MS.gene72319:CDS
TGAGAGAAGTACAAGTAGTA+GGG 0.508778 1.4:-49613582 None:intergenic
TATAATGAGTTGGAGAAGAA+AGG 0.514463 1.4:+49615781 MS.gene72319:CDS
CCTTAATGTTATGGCTAGAA+GGG 0.516210 1.4:-49615600 None:intergenic
GCATTCCAACCTGCTTGTGT+TGG 0.516376 1.4:-49615754 None:intergenic
ATTGGTTCAATAAGTTGTTG+TGG 0.522482 1.4:-49615489 None:intergenic
AAATGACTACTATGATTACA+TGG 0.536213 1.4:+49614505 MS.gene72319:CDS
TCTAGTATAAAATTTGATGA+AGG 0.538645 1.4:-49615804 None:intergenic
GGATTTAAGAGAATTGTTGT+GGG 0.540936 1.4:+49615376 MS.gene72319:CDS
CAAGTAGTAGGGAAAGGCAT+AGG 0.545721 1.4:-49613571 None:intergenic
CACACCACATTCACAATCCT+AGG 0.549324 1.4:+49615544 MS.gene72319:CDS
TCACTGATTCAATGAAAGAT+GGG 0.549620 1.4:-49615312 None:intergenic
ACCTTTCCCCGAAAACCGGC+CGG 0.554274 1.4:+49614053 MS.gene72319:CDS
CGTTTGAAGCCATGCTGCGT+CGG 0.555770 1.4:+49615625 MS.gene72319:CDS
GAATGCTGTGTATAATGAGT+TGG 0.561108 1.4:+49615771 MS.gene72319:CDS
GTAGTAGGGAAAGGCATAGG+AGG 0.561661 1.4:-49613568 None:intergenic
CAGTTACACCCAACACAAGC+AGG 0.562042 1.4:+49615745 MS.gene72319:CDS
GAAGTACAAGTAGTAGGGAA+AGG 0.564766 1.4:-49613577 None:intergenic
TGAAACTATCGAAAATGCCT+AGG 0.565738 1.4:-49615561 None:intergenic
TATGGGATGAACTTTGCATA+TGG 0.569763 1.4:+49614344 MS.gene72319:CDS
TTGAAATGAGGTTTCAGCAG+TGG 0.574553 1.4:-49615431 None:intergenic
CCGTCGGAGAATCTTCCGGC+CGG 0.581240 1.4:-49614068 None:intergenic
CCGAACAGGATTTGAAGTAT+GGG 0.582491 1.4:+49614327 MS.gene72319:CDS
TATGATTACATGGCCACAGA+TGG 0.592662 1.4:+49614515 MS.gene72319:CDS
TTGAAGATGAATCAAATTGG+TGG 0.597863 1.4:-49615347 None:intergenic
GCCAGTTAAAACTCTGCCGT+CGG 0.597884 1.4:-49614084 None:intergenic
TACACCCAACACAAGCAGGT+TGG 0.603846 1.4:+49615749 MS.gene72319:CDS
AGTTGTTGTGGAGAGCTACA+AGG 0.617684 1.4:-49615477 None:intergenic
GTAAGCGATGAGTATTCTTG+TGG 0.618439 1.4:+49615649 MS.gene72319:CDS
GAGGTTTCAGCAGTGGCTTG+AGG 0.618863 1.4:-49615424 None:intergenic
TCGCTTACACCGACGCAGCA+TGG 0.629032 1.4:-49615634 None:intergenic
AGAAATGGGGATGCAAGTTG+AGG 0.632097 1.4:+49613914 MS.gene72319:CDS
GAAGTTGAACCAAGAAACAA+AGG 0.632242 1.4:+49615519 MS.gene72319:CDS
GGGAAAGGTTATGCCATATG+GGG 0.639788 1.4:-49614039 None:intergenic
AATGCCTAGGATTGTGAATG+TGG 0.644042 1.4:-49615548 None:intergenic
GGGATGAACTTTGCATATGG+TGG 0.671490 1.4:+49614347 MS.gene72319:CDS
TACCAAAAGAGAGCCATCTG+TGG 0.683874 1.4:-49614528 None:intergenic
CCGGCCGGAAGATTCTCCGA+CGG 0.685737 1.4:+49614068 MS.gene72319:CDS
AGGATGATTGAGATGGCGAG+TGG 0.741996 1.4:-49613937 None:intergenic
TCATTGTTATAGGAGAAATG+GGG 0.752876 1.4:+49613901 MS.gene72319:intron
GCTTGAGGAAGACAACCAAG+AGG 0.760979 1.4:-49615409 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATTTAATTTAAATTTTGA+GGG + chr1.4:49613620-49613639 MS.gene72319:intron 10.0%
!!! TGAATTTAATTTAAATTTTG+AGG + chr1.4:49613619-49613638 MS.gene72319:intron 10.0%
!! AATATTTCACATTATTAGTA+TGG - chr1.4:49613711-49613730 None:intergenic 15.0%
!! ACATACTTCTAATAAATATT+TGG + chr1.4:49615687-49615706 MS.gene72319:CDS 15.0%
!! TCAAAAAAATTGTTTGTATT+CGG + chr1.4:49613960-49613979 MS.gene72319:CDS 15.0%
!!! AATACAAACAATTTTTTTGA+AGG - chr1.4:49613960-49613979 None:intergenic 15.0%
!!! TTTTTTTTAACGTAAGTAAT+TGG + chr1.4:49614211-49614230 MS.gene72319:intron 15.0%
!! GATAAGATTAAATACAAGTT+AGG + chr1.4:49615020-49615039 MS.gene72319:intron 20.0%
!!! AGACTCATATAAATTTTTTG+AGG + chr1.4:49614752-49614771 MS.gene72319:intron 20.0%
!!! ATATTGAATCAACTTTCTTT+TGG + chr1.4:49615719-49615738 MS.gene72319:CDS 20.0%
!!! GACTCATATAAATTTTTTGA+GGG + chr1.4:49614753-49614772 MS.gene72319:intron 20.0%
!!! TATTGAATCAACTTTCTTTT+GGG + chr1.4:49615720-49615739 MS.gene72319:CDS 20.0%
!!! TTAGGAAGAAATGTATTTTT+AGG + chr1.4:49615038-49615057 MS.gene72319:intron 20.0%
! AAATGACTACTATGATTACA+TGG + chr1.4:49614505-49614524 MS.gene72319:CDS 25.0%
! AATCATTGTTATAGGAGAAA+TGG + chr1.4:49613899-49613918 MS.gene72319:intron 25.0%
! AATGATGGTATTAGAAAGAA+GGG - chr1.4:49614141-49614160 None:intergenic 25.0%
! AATTTCATTGAATAAACGCA+GGG + chr1.4:49615286-49615305 MS.gene72319:intron 25.0%
! ATCATTGTTATAGGAGAAAT+GGG + chr1.4:49613900-49613919 MS.gene72319:intron 25.0%
! ATCTTGTCAATCATTGTTAT+AGG + chr1.4:49613891-49613910 MS.gene72319:intron 25.0%
! GAAGGGTAAATTAATTAACT+AGG - chr1.4:49614124-49614143 None:intergenic 25.0%
! TAAAACCTATATCTGATTCA+TGG + chr1.4:49614012-49614031 MS.gene72319:CDS 25.0%
! TAATGATGGTATTAGAAAGA+AGG - chr1.4:49614142-49614161 None:intergenic 25.0%
! TAATTTCATTGAATAAACGC+AGG + chr1.4:49615285-49615304 MS.gene72319:intron 25.0%
! TGAAATTATACATCCAAGAA+TGG + chr1.4:49615084-49615103 MS.gene72319:intron 25.0%
! TTAGAAACCCTTCTTAATTA+TGG - chr1.4:49615199-49615218 None:intergenic 25.0%
!! GTATTTGATACATTTTCTTC+AGG + chr1.4:49614377-49614396 MS.gene72319:CDS 25.0%
!! TACCATAATTTGTGAATGAT+TGG - chr1.4:49614293-49614312 None:intergenic 25.0%
!! TATGACTTTTCTTAAGTGAT+TGG + chr1.4:49613838-49613857 MS.gene72319:intron 25.0%
!! TATTTTTCTCTTTCCATTCT+TGG - chr1.4:49615100-49615119 None:intergenic 25.0%
!! TGAATCAGATATAGGTTTTA+TGG - chr1.4:49614012-49614031 None:intergenic 25.0%
!!! AGAGAGTATAGACATTTTTT+TGG - chr1.4:49614445-49614464 None:intergenic 25.0%
!!! AGTGTTTCAATTGATAATGA+TGG - chr1.4:49614156-49614175 None:intergenic 25.0%
!!! TCATATAAATTTTTTGAGGG+TGG + chr1.4:49614756-49614775 MS.gene72319:intron 25.0%
AATTAACTAGGAACTTACCA+AGG - chr1.4:49614112-49614131 None:intergenic 30.0%
ACTACAAGCCATAATTAAGA+AGG + chr1.4:49615188-49615207 MS.gene72319:intron 30.0%
ACTTACATTCTTTCGACTTA+AGG - chr1.4:49615137-49615156 None:intergenic 30.0%
AGAGACATAAGCAATAGAAT+TGG - chr1.4:49614477-49614496 None:intergenic 30.0%
AGGATTTAAGAGAATTGTTG+TGG + chr1.4:49615375-49615394 MS.gene72319:CDS 30.0%
CACCAATCATTCACAAATTA+TGG + chr1.4:49614288-49614307 MS.gene72319:CDS 30.0%
CTACAAGCCATAATTAAGAA+GGG + chr1.4:49615189-49615208 MS.gene72319:intron 30.0%
CTTACATTCTTTCGACTTAA+GGG - chr1.4:49615136-49615155 None:intergenic 30.0%
GGATTTAAGAGAATTGTTGT+GGG + chr1.4:49615376-49615395 MS.gene72319:CDS 30.0%
GTAAGTTTATGGAGATCATT+TGG + chr1.4:49615151-49615170 MS.gene72319:intron 30.0%
GTCGAAAGAATGTAAGTTTA+TGG + chr1.4:49615140-49615159 MS.gene72319:intron 30.0%
TCAAACGTTCCTTAATGTTA+TGG - chr1.4:49615612-49615631 None:intergenic 30.0%
TCATTGTTATAGGAGAAATG+GGG + chr1.4:49613901-49613920 MS.gene72319:intron 30.0%
TGATCTCAATTCCAAATACT+TGG - chr1.4:49614270-49614289 None:intergenic 30.0%
TTGAAGATGAATCAAATTGG+TGG - chr1.4:49615350-49615369 None:intergenic 30.0%
TTGATTCATCTTCAAAGCAT+AGG + chr1.4:49615355-49615374 MS.gene72319:CDS 30.0%
! ATTGGTTCAATAAGTTGTTG+TGG - chr1.4:49615492-49615511 None:intergenic 30.0%
! TATAATGAGTTGGAGAAGAA+AGG + chr1.4:49615781-49615800 MS.gene72319:CDS 30.0%
! TTTTTGATAAGCAAGAAGAG+TGG - chr1.4:49614851-49614870 None:intergenic 30.0%
!! ACTATTGCAACTTTGAAATG+AGG - chr1.4:49615446-49615465 None:intergenic 30.0%
!! ATCACTGATTCAATGAAAGA+TGG - chr1.4:49615316-49615335 None:intergenic 30.0%
!! GCTTTGAAGATGAATCAAAT+TGG - chr1.4:49615353-49615372 None:intergenic 30.0%
!! TCACTGATTCAATGAAAGAT+GGG - chr1.4:49615315-49615334 None:intergenic 30.0%
!! TCGATTTGAGTTGTCATATT+TGG - chr1.4:49614404-49614423 None:intergenic 30.0%
!! TTTTTGAAGGATGATTGAGA+TGG - chr1.4:49613947-49613966 None:intergenic 30.0%
!!! AGACATTTTTTTGGATGACT+TGG - chr1.4:49614436-49614455 None:intergenic 30.0%
!!! TATAAATTTTTTGAGGGTGG+CGG + chr1.4:49614759-49614778 MS.gene72319:intron 30.0%
CCTTAATGTTATGGCTAGAA+GGG - chr1.4:49615603-49615622 None:intergenic 35.0%
GAAGTTGAACCAAGAAACAA+AGG + chr1.4:49615519-49615538 MS.gene72319:CDS 35.0%
GAATGCTGTGTATAATGAGT+TGG + chr1.4:49615771-49615790 MS.gene72319:CDS 35.0%
TATGGGATGAACTTTGCATA+TGG + chr1.4:49614344-49614363 MS.gene72319:CDS 35.0%
TCCTTAATGTTATGGCTAGA+AGG - chr1.4:49615604-49615623 None:intergenic 35.0%
TGAAACTATCGAAAATGCCT+AGG - chr1.4:49615564-49615583 None:intergenic 35.0%
! TAGGCATTTTCGATAGTTTC+AGG + chr1.4:49615563-49615582 MS.gene72319:CDS 35.0%
! TGAGAGAAGTACAAGTAGTA+GGG - chr1.4:49613585-49613604 None:intergenic 35.0%
!! CATTTTCGATAGTTTCAGGT+CGG + chr1.4:49615567-49615586 MS.gene72319:CDS 35.0%
!!! TTTTTGGATGACTTGGTTGA+AGG - chr1.4:49614429-49614448 None:intergenic 35.0%
AACTTTGCATATGGTGGTAC+AGG + chr1.4:49614353-49614372 MS.gene72319:CDS 40.0%
AATGCCTAGGATTGTGAATG+TGG - chr1.4:49615551-49615570 None:intergenic 40.0%
ATTGCTTATGTCTCTGTTGC+TGG + chr1.4:49614482-49614501 MS.gene72319:CDS 40.0%
CCATACTTCAAATCCTGTTC+GGG - chr1.4:49614329-49614348 None:intergenic 40.0%
CCCATACTTCAAATCCTGTT+CGG - chr1.4:49614330-49614349 None:intergenic 40.0%
CCCTTCTAGCCATAACATTA+AGG + chr1.4:49615600-49615619 MS.gene72319:CDS 40.0%
CTACTACTTGTACTTCTCTC+AGG + chr1.4:49613584-49613603 MS.gene72319:CDS 40.0%
GAAGTACAAGTAGTAGGGAA+AGG - chr1.4:49613580-49613599 None:intergenic 40.0%
GCTCTCCATGAATCAGATAT+AGG - chr1.4:49614020-49614039 None:intergenic 40.0%
GGTTCAACTTCGTAACAGAT+TGG - chr1.4:49615510-49615529 None:intergenic 40.0%
GTAAGCGATGAGTATTCTTG+TGG + chr1.4:49615649-49615668 MS.gene72319:CDS 40.0%
TAATAACATAGTGCCCGAAC+AGG + chr1.4:49614313-49614332 MS.gene72319:CDS 40.0%
TATGATTACATGGCCACAGA+TGG + chr1.4:49614515-49614534 MS.gene72319:CDS 40.0%
TTGAAATGAGGTTTCAGCAG+TGG - chr1.4:49615434-49615453 None:intergenic 40.0%
TTGGCTGCAGAACAAATAAG+AGG - chr1.4:49614251-49614270 None:intergenic 40.0%
TTGTTCTGCAGCCAAGTATT+TGG + chr1.4:49614256-49614275 MS.gene72319:intron 40.0%
! CCGAACAGGATTTGAAGTAT+GGG + chr1.4:49614327-49614346 MS.gene72319:CDS 40.0%
! CTGAGAGAAGTACAAGTAGT+AGG - chr1.4:49613586-49613605 None:intergenic 40.0%
! TGGTGTGTTCCTTTGTTTCT+TGG - chr1.4:49615531-49615550 None:intergenic 40.0%
!!! AGAGTTTTAACTGGCTTCCT+TGG + chr1.4:49614092-49614111 MS.gene72319:CDS 40.0%
AAGAGTGGACAAGCATCAAG+CGG - chr1.4:49614836-49614855 None:intergenic 45.0%
AGAAATGGGGATGCAAGTTG+AGG + chr1.4:49613914-49613933 MS.gene72319:CDS 45.0%
AGTTGTTGTGGAGAGCTACA+AGG - chr1.4:49615480-49615499 None:intergenic 45.0%
CACACCACATTCACAATCCT+AGG + chr1.4:49615544-49615563 MS.gene72319:CDS 45.0%
CATAACCTTTCCCCGAAAAC+CGG + chr1.4:49614049-49614068 MS.gene72319:CDS 45.0%
CATTCCAACCTGCTTGTGTT+GGG - chr1.4:49615756-49615775 None:intergenic 45.0%
GGAGATTCGTATGTCGATAC+TGG + chr1.4:49613981-49614000 MS.gene72319:CDS 45.0%
GGGAAAGGTTATGCCATATG+GGG - chr1.4:49614042-49614061 None:intergenic 45.0%
GGGATGAACTTTGCATATGG+TGG + chr1.4:49614347-49614366 MS.gene72319:CDS 45.0%
GGGGAAAGGTTATGCCATAT+GGG - chr1.4:49614043-49614062 None:intergenic 45.0%
GTATCATCGACATCCCAACT+AGG - chr1.4:49614814-49614833 None:intergenic 45.0%
GTGGGTGATTTACAACCTCT+TGG + chr1.4:49615394-49615413 MS.gene72319:CDS 45.0%
TACCAAAAGAGAGCCATCTG+TGG - chr1.4:49614531-49614550 None:intergenic 45.0%
! CAAGTAGTAGGGAAAGGCAT+AGG - chr1.4:49613574-49613593 None:intergenic 45.0%
! CCCGAACAGGATTTGAAGTA+TGG + chr1.4:49614326-49614345 MS.gene72319:CDS 45.0%
AGGATGATTGAGATGGCGAG+TGG - chr1.4:49613940-49613959 None:intergenic 50.0%
CAGTTACACCCAACACAAGC+AGG + chr1.4:49615745-49615764 MS.gene72319:CDS 50.0%
CATCGACATCCCAACTAGGT+TGG - chr1.4:49614810-49614829 None:intergenic 50.0%
CGGGGAAAGGTTATGCCATA+TGG - chr1.4:49614044-49614063 None:intergenic 50.0%
GATTCATGGAGAGCCCCATA+TGG + chr1.4:49614026-49614045 MS.gene72319:CDS 50.0%
GCATTCCAACCTGCTTGTGT+TGG - chr1.4:49615757-49615776 None:intergenic 50.0%
GCCAGTTAAAACTCTGCCGT+CGG - chr1.4:49614087-49614106 None:intergenic 50.0%
GCTTGAGGAAGACAACCAAG+AGG - chr1.4:49615412-49615431 None:intergenic 50.0%
TACACCCAACACAAGCAGGT+TGG + chr1.4:49615749-49615768 MS.gene72319:CDS 50.0%
! GTAGTAGGGAAAGGCATAGG+AGG - chr1.4:49613571-49613590 None:intergenic 50.0%
!! AGAATCTTCCGGCCGGTTTT+CGG - chr1.4:49614064-49614083 None:intergenic 50.0%
!! TCCGACGGCAGAGTTTTAAC+TGG + chr1.4:49614083-49614102 MS.gene72319:CDS 50.0%
!!! TTTTTTGAGGGTGGCGGCAT+AGG + chr1.4:49614765-49614784 MS.gene72319:intron 50.0%
GAGGTTTCAGCAGTGGCTTG+AGG - chr1.4:49615427-49615446 None:intergenic 55.0%
TCTGCCGTCGGAGAATCTTC+CGG - chr1.4:49614075-49614094 None:intergenic 55.0%
! CGTTTGAAGCCATGCTGCGT+CGG + chr1.4:49615625-49615644 MS.gene72319:CDS 55.0%
! GGCCACAGATGGCTCTCTTT+TGG + chr1.4:49614526-49614545 MS.gene72319:CDS 55.0%
!! AATCTTCCGGCCGGTTTTCG+GGG - chr1.4:49614062-49614081 None:intergenic 55.0%
!! CATAGGATGGAGGTGTCTCG+GGG + chr1.4:49614782-49614801 MS.gene72319:intron 55.0%
!! GAATCTTCCGGCCGGTTTTC+GGG - chr1.4:49614063-49614082 None:intergenic 55.0%
!! GCATAGGATGGAGGTGTCTC+GGG + chr1.4:49614781-49614800 MS.gene72319:intron 55.0%
!! GGCATAGGATGGAGGTGTCT+CGG + chr1.4:49614780-49614799 MS.gene72319:intron 55.0%
ACCTTTCCCCGAAAACCGGC+CGG + chr1.4:49614053-49614072 MS.gene72319:CDS 60.0%
TCGCTTACACCGACGCAGCA+TGG - chr1.4:49615637-49615656 None:intergenic 60.0%
! CTCGGGGTGCCAACCTAGTT+GGG + chr1.4:49614798-49614817 MS.gene72319:intron 60.0%
! TCTCGGGGTGCCAACCTAGT+TGG + chr1.4:49614797-49614816 MS.gene72319:intron 60.0%
! TTGAGGGTGGCGGCATAGGA+TGG + chr1.4:49614769-49614788 MS.gene72319:intron 60.0%
CCGGCCGGAAGATTCTCCGA+CGG + chr1.4:49614068-49614087 MS.gene72319:CDS 65.0%
CCGTCGGAGAATCTTCCGGC+CGG - chr1.4:49614071-49614090 None:intergenic 65.0%
! AGGGTGGCGGCATAGGATGG+AGG + chr1.4:49614772-49614791 MS.gene72319:intron 65.0%
!! TCCGGCCGGTTTTCGGGGAA+AGG - chr1.4:49614057-49614076 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 49613542 49615825 49613542 ID=MS.gene72319
chr1.4 mRNA 49613542 49615825 49613542 ID=MS.gene72319.t1;Parent=MS.gene72319
chr1.4 exon 49613542 49613605 49613542 ID=MS.gene72319.t1.exon1;Parent=MS.gene72319.t1
chr1.4 CDS 49613542 49613605 49613542 ID=cds.MS.gene72319.t1;Parent=MS.gene72319.t1
chr1.4 exon 49613913 49614113 49613913 ID=MS.gene72319.t1.exon2;Parent=MS.gene72319.t1
chr1.4 CDS 49613913 49614113 49613913 ID=cds.MS.gene72319.t1;Parent=MS.gene72319.t1
chr1.4 exon 49614267 49614547 49614267 ID=MS.gene72319.t1.exon3;Parent=MS.gene72319.t1
chr1.4 CDS 49614267 49614547 49614267 ID=cds.MS.gene72319.t1;Parent=MS.gene72319.t1
chr1.4 exon 49615307 49615825 49615307 ID=MS.gene72319.t1.exon4;Parent=MS.gene72319.t1
chr1.4 CDS 49615307 49615825 49615307 ID=cds.MS.gene72319.t1;Parent=MS.gene72319.t1
Gene Sequence

>MS.gene72319

ATGGACTCAAAAAAGCAACTTTTCATCCTCCTATGCCTTTCCCTACTACTTGTACTTCTCTCAGGTATATATACGTATGAATTTAATTTAAATTTTGAGGGAAATATGTTAATGAATTTATGATCATGAAATTTTAATACAATTTATAGTAAATGTGTTTTTGTAACCATACTAATAATGTGAAATATTCATTGATTTTGTCTATGACTTAATTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTCAACTTTTTATATGACTTTTCTTAAGTGATTGGTGATTAATAAAAATCTTAAACTAATTGTACATCTTGTCAATCATTGTTATAGGAGAAATGGGGATGCAAGTTGAGGCCACTCGCCATCTCAATCATCCTTCAAAAAAATTGTTTGTATTCGGAGATTCGTATGTCGATACTGGCAACACCATAAAACCTATATCTGATTCATGGAGAGCCCCATATGGCATAACCTTTCCCCGAAAACCGGCCGGAAGATTCTCCGACGGCAGAGTTTTAACTGGCTTCCTTGGTAAGTTCCTAGTTAATTAATTTACCCTTCTTTCTAATACCATCATTATCAATTGAAACACTACAAAGTGCAATGCTTTTTAAGTAACGTGTTTTATTTTTTTTTAACGTAAGTAATTGGAATTAACGATGCTTCCTCTTATTTGTTCTGCAGCCAAGTATTTGGAATTGAGATCACCAATCATTCACAAATTATGGTATAATAACATAGTGCCCGAACAGGATTTGAAGTATGGGATGAACTTTGCATATGGTGGTACAGGTGTATTTGATACATTTTCTTCAGGTCCAAATATGACAACTCAAATCGATTCCTTCAACCAAGTCATCCAAAAAAATGTCTATACTCTCTCAGATATCACCAATTCTATTGCTTATGTCTCTGTTGCTGGAAATGACTACTATGATTACATGGCCACAGATGGCTCTCTTTTGGTAATTTTAATCATCATACTTTCTATATTTCTATGATGTAAAGTATGAAACTCAAAACAGAATTTTAAATTTAAAAACATAAATTATATATTCTTTATAATGATGATGATGATGATAATAATTTAATTATAAAAAATTTAAAATAAATATTGTGTAACACTAGCTCAATATCTCAAAAATATAAAGATAAAAGACTCATATAAAAGACTCATATAAATTTTTTGAGGGTGGCGGCATAGGATGGAGGTGTCTCGGGGTGCCAACCTAGTTGGGATGTCGATGATACCGCTTGATGCTTGTCCACTCTTCTTGCTTATCAAAAAAAAAATGCTATAGACATCTCAAAAAAATAAAGATAAAAAAACTCATATAGTAAACAACTATGCTATAGACATCTAAAAAAAATAAAGATAAAAAACTTAAATAGTAAACAACTATGCTATAGACATCTCAAAAAAAAAAATGCTACAGAGATAAGATTAAATACAAGTTAGGAAGAAATGTATTTTTAGGAAAAAAAAATGAAAATAAACTTTTGAAATTATACATCCAAGAATGGAAAGAGAAAAATAGAAAGTAAATTAACCCTTAAGTCGAAAGAATGTAAGTTTATGGAGATCATTTGGAAACTTACTGAAAAACTACAAGCCATAATTAAGAAGGGTTTCTAAAAAGAATAAAATTGCACTAATTTTTTCATCTATTACTTTACATATTATAAATGAATTTTAACAATTTAATTTCATTGAATAAACGCAGGGTTTCCCATCTTTCATTGAATCAGTGATTAAACAAATAACCACCAATTTGATTCATCTTCAAAGCATAGGATTTAAGAGAATTGTTGTGGGTGATTTACAACCTCTTGGTTGTCTTCCTCAAGCCACTGCTGAAACCTCATTTCAAAGTTGCAATAGTACATTTAATGACCTTGTAGCTCTCCACAACAACTTATTGAACCAATCTGTTACGAAGTTGAACCAAGAAACAAAGGAACACACCACATTCACAATCCTAGGCATTTTCGATAGTTTCAGGTCGGTGTTGAATCACCCTTCTAGCCATAACATTAAGGAACGTTTGAAGCCATGCTGCGTCGGTGTAAGCGATGAGTATTCTTGTGGAAGTGTAGATTCTGAACATACTTCTAATAAATATTTGGTTTGTGAAAATATTGAATCAACTTTCTTTTGGGATCAGTTACACCCAACACAAGCAGGTTGGAATGCTGTGTATAATGAGTTGGAGAAGAAAGGCCTTCATCAAATTTTATACTAG
Protein sequence

>MS.gene72319.t1

MDSKKQLFILLCLSLLLVLLSGEMGMQVEATRHLNHPSKKLFVFGDSYVDTGNTIKPISDSWRAPYGITFPRKPAGRFSDGRVLTGFLAKYLELRSPIIHKLWYNNIVPEQDLKYGMNFAYGGTGVFDTFSSGPNMTTQIDSFNQVIQKNVYTLSDITNSIAYVSVAGNDYYDYMATDGSLLGFPSFIESVIKQITTNLIHLQSIGFKRIVVGDLQPLGCLPQATAETSFQSCNSTFNDLVALHNNLLNQSVTKLNQETKEHTTFTILGIFDSFRSVLNHPSSHNIKERLKPCCVGVSDEYSCGSVDSEHTSNKYLVCENIESTFFWDQLHPTQAGWNAVYNELEKKGLHQILY