AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72322

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72322.t1 MTR_1g060500 94.708 359 16 1 1 356 1 359 0.0 677
MS.gene72322.t1 MTR_1g060490 74.719 356 82 3 1 356 1 348 0.0 536
MS.gene72322.t1 MTR_1g060520 74.719 356 57 2 1 356 1 323 0.0 533
MS.gene72322.t1 MTR_7g104220 57.895 342 130 8 21 354 18 353 8.16e-136 391
MS.gene72322.t1 MTR_1g092740 49.682 314 141 6 40 347 38 340 1.75e-102 306
MS.gene72322.t1 MTR_1g092760 45.370 324 161 5 38 356 37 349 3.10e-90 275
MS.gene72322.t1 MTR_1g092750 45.938 320 155 6 35 347 35 343 4.16e-89 272
MS.gene72322.t1 MTR_1g092690 42.197 346 184 5 7 347 18 352 9.10e-89 271
MS.gene72322.t1 MTR_1g060530 84.146 82 13 0 183 264 33 114 3.01e-43 146
MS.gene72322.t1 MTR_3g098270 31.153 321 183 13 41 337 35 341 7.93e-36 134
MS.gene72322.t1 MTR_2g044100 30.495 364 200 15 6 336 5 348 2.23e-35 133
MS.gene72322.t1 MTR_4g035353 29.296 355 208 14 13 342 9 345 6.34e-32 123
MS.gene72322.t1 MTR_5g084750 29.070 344 214 12 10 336 3 333 7.32e-32 123
MS.gene72322.t1 MTR_8g022810 26.536 358 227 13 9 346 14 355 4.39e-31 121
MS.gene72322.t1 MTR_3g082830 30.117 342 194 11 41 356 39 361 4.61e-31 121
MS.gene72322.t1 MTR_5g084770 31.195 343 203 13 13 336 4 332 6.20e-31 120
MS.gene72322.t1 MTR_5g084790 29.716 387 207 15 1 355 1 354 2.47e-30 119
MS.gene72322.t1 MTR_8g031390 28.797 316 191 12 41 338 38 337 1.34e-29 117
MS.gene72322.t1 MTR_3g005660 29.448 326 180 13 41 336 37 342 9.44e-29 115
MS.gene72322.t1 MTR_5g009100 30.408 319 179 14 42 335 48 348 1.00e-28 115
MS.gene72322.t1 MTR_8g075230 28.771 358 221 13 5 342 2 345 1.05e-28 114
MS.gene72322.t1 MTR_1g092710 35.354 198 93 7 153 347 3 168 1.69e-28 109
MS.gene72322.t1 MTR_3g024510 26.724 348 215 12 11 338 15 342 3.60e-28 113
MS.gene72322.t1 MTR_8g022790 28.571 350 205 14 8 336 7 332 9.51e-28 112
MS.gene72322.t1 MTR_2g015080 29.598 348 197 18 27 343 27 357 1.42e-27 111
MS.gene72322.t1 MTR_8g031400 27.221 349 216 13 8 338 10 338 2.54e-27 110
MS.gene72322.t1 MTR_5g022630 29.598 348 210 13 14 340 19 352 3.10e-27 110
MS.gene72322.t1 MTR_7g116510 26.686 341 211 13 39 356 24 348 6.74e-26 107
MS.gene72322.t1 MTR_7g116870 26.807 332 199 11 39 338 32 351 7.63e-26 107
MS.gene72322.t1 MTR_3g464730 28.338 367 215 13 16 355 6 351 1.25e-25 105
MS.gene72322.t1 MTR_3g021460 28.165 316 184 11 41 337 32 323 1.93e-25 105
MS.gene72322.t1 MTR_8g031430 28.481 316 193 13 41 338 38 338 2.27e-25 105
MS.gene72322.t1 MTR_1g025760 27.056 377 237 16 1 355 42 402 2.74e-25 105
MS.gene72322.t1 MTR_8g028160 25.893 336 201 10 39 338 35 358 2.76e-25 105
MS.gene72322.t1 MTR_2g017965 28.037 321 189 14 41 340 34 333 2.82e-25 105
MS.gene72322.t1 MTR_3g052490 27.829 327 203 14 41 346 33 347 3.98e-25 104
MS.gene72322.t1 MTR_0565s0010 25.852 352 216 13 10 338 8 337 1.09e-24 103
MS.gene72322.t1 MTR_1g079540 25.683 366 218 14 9 346 5 344 1.27e-24 103
MS.gene72322.t1 MTR_3g052580 25.915 328 207 14 41 346 29 342 2.02e-24 103
MS.gene72322.t1 MTR_3g052580 25.915 328 207 14 41 346 28 341 2.12e-24 103
MS.gene72322.t1 MTR_3g052480 27.879 330 200 15 41 346 34 349 2.81e-24 102
MS.gene72322.t1 MTR_2g461580 27.052 329 200 11 41 352 32 337 3.00e-24 102
MS.gene72322.t1 MTR_1g069175 24.658 365 225 12 9 346 7 348 4.38e-24 102
MS.gene72322.t1 MTR_1g079530 27.654 358 207 15 11 346 9 336 5.04e-24 101
MS.gene72322.t1 MTR_2g084585 28.144 334 207 12 41 354 31 351 8.04e-24 100
MS.gene72322.t1 MTR_0009s0250 27.129 317 198 12 41 343 34 331 8.90e-24 100
MS.gene72322.t1 MTR_3g005650 27.954 347 200 15 13 337 11 329 9.01e-24 100
MS.gene72322.t1 MTR_4g087985 25.581 344 215 14 26 343 25 353 1.43e-23 100
MS.gene72322.t1 MTR_5g083040 25.076 331 212 9 38 344 30 348 2.11e-23 100
MS.gene72322.t1 MTR_8g031390 28.723 282 172 11 41 304 38 308 2.52e-23 99.0
MS.gene72322.t1 MTR_5g074270 28.788 330 200 16 41 347 34 351 2.95e-23 99.8
MS.gene72322.t1 MTR_7g116520 26.543 324 193 12 39 336 33 337 2.95e-23 99.8
MS.gene72322.t1 MTR_3g114090 27.011 348 219 15 28 355 26 358 3.97e-23 99.0
MS.gene72322.t1 MTR_5g022640 27.089 347 219 12 14 340 19 351 1.35e-22 97.8
MS.gene72322.t1 MTR_8g031420 26.271 354 227 14 1 338 1 336 1.91e-22 97.4
MS.gene72322.t1 MTR_4g056160 28.395 324 188 12 41 337 28 334 2.04e-22 97.1
MS.gene72322.t1 MTR_2g033930 29.730 333 194 18 41 352 33 346 3.06e-22 96.7
MS.gene72322.t1 MTR_1g025780 24.478 335 218 12 41 355 42 361 4.92e-22 96.3
MS.gene72322.t1 MTR_4g108690 26.074 326 212 10 42 349 29 343 1.06e-21 95.1
MS.gene72322.t1 MTR_4g056280 29.022 317 192 13 41 337 31 334 1.21e-21 95.1
MS.gene72322.t1 MTR_1g025700 25.449 334 215 12 41 354 51 370 1.86e-21 94.7
MS.gene72322.t1 MTR_1g025720 25.272 368 234 15 9 356 9 355 2.06e-21 94.4
MS.gene72322.t1 MTR_2g017955 28.037 321 192 12 41 342 34 334 4.54e-21 93.6
MS.gene72322.t1 MTR_8g087890 25.000 320 200 12 42 338 33 335 4.55e-21 93.2
MS.gene72322.t1 MTR_1g025680 26.822 343 216 15 15 337 11 338 4.60e-21 94.4
MS.gene72322.t1 MTR_7g033150 25.000 368 230 10 16 346 10 368 6.16e-21 93.2
MS.gene72322.t1 MTR_2g015580 25.455 330 213 9 39 342 46 368 6.22e-21 93.6
MS.gene72322.t1 MTR_1g030275 24.734 376 236 13 1 346 7 365 8.17e-21 92.8
MS.gene72322.t1 MTR_3g069780 27.378 347 195 15 37 346 27 353 9.46e-21 92.4
MS.gene72322.t1 MTR_6g021530 23.706 367 216 15 13 346 8 343 9.63e-21 92.4
MS.gene72322.t1 MTR_8g079050 24.691 324 202 13 42 337 39 348 1.24e-20 92.4
MS.gene72322.t1 MTR_5g078210 25.382 327 202 14 42 345 27 334 1.30e-20 92.0
MS.gene72322.t1 MTR_1g025910 26.019 319 207 9 45 346 41 347 1.67e-20 92.0
MS.gene72322.t1 MTR_3g438030 27.697 343 191 15 37 342 27 349 2.07e-20 91.7
MS.gene72322.t1 MTR_8g075220 26.211 351 211 13 35 355 35 367 2.61e-20 91.3
MS.gene72322.t1 MTR_4g122200 28.190 337 202 16 42 354 37 357 2.63e-20 91.3
MS.gene72322.t1 MTR_1g030230 24.064 374 224 15 13 347 9 361 3.50e-20 90.9
MS.gene72322.t1 MTR_8g087870 29.467 319 175 16 41 336 30 321 5.99e-20 90.1
MS.gene72322.t1 MTR_7g116500 25.490 357 218 15 2 335 4 335 6.45e-20 90.1
MS.gene72322.t1 MTR_2g100620 27.729 339 203 12 41 354 32 353 6.75e-20 89.7
MS.gene72322.t1 MTR_5g093090 27.586 319 198 14 41 338 29 335 7.11e-20 90.1
MS.gene72322.t1 MTR_4g104240 24.332 374 221 13 7 344 10 357 7.13e-20 90.1
MS.gene72322.t1 MTR_1g030220 23.958 384 229 14 5 346 6 368 1.09e-19 89.7
MS.gene72322.t1 MTR_3g023220 29.573 328 165 19 41 338 34 325 1.23e-19 89.4
MS.gene72322.t1 MTR_1g030268 24.129 373 237 16 5 347 11 367 1.38e-19 89.4
MS.gene72322.t1 MTR_8g014910 27.729 339 203 12 41 354 33 354 1.69e-19 89.0
MS.gene72322.t1 MTR_2g015630 25.970 335 207 12 45 348 36 360 2.34e-19 88.6
MS.gene72322.t1 MTR_4g019880 25.691 362 198 17 9 336 13 337 6.21e-19 87.4
MS.gene72322.t1 MTR_2g015670 27.566 341 192 16 36 346 27 342 2.81e-18 85.5
MS.gene72322.t1 MTR_2g017925 26.899 316 189 11 41 337 34 326 5.29e-18 84.7
MS.gene72322.t1 MTR_3g448360 25.806 341 209 13 37 346 26 353 6.16e-18 84.3
MS.gene72322.t1 MTR_2g015650 25.867 375 216 14 13 346 3 356 6.68e-18 84.3
MS.gene72322.t1 MTR_8g074570 25.000 352 218 15 7 336 16 343 1.52e-17 83.2
MS.gene72322.t1 MTR_3g114120 26.911 327 199 14 41 346 48 355 1.79e-17 83.2
MS.gene72322.t1 MTR_2g015590 25.982 331 203 10 39 338 30 349 3.27e-17 82.4
MS.gene72322.t1 MTR_8g022810 29.565 230 136 9 9 222 14 233 5.08e-17 81.3
MS.gene72322.t1 MTR_7g008060 24.377 361 217 14 8 346 7 333 6.75e-17 81.3
MS.gene72322.t1 MTR_3g069520 26.627 338 199 15 37 342 27 347 2.76e-16 79.7
MS.gene72322.t1 MTR_6g007095 22.872 376 228 12 1 336 1 354 3.83e-16 80.1
MS.gene72322.t1 MTR_2g017875 27.616 344 177 18 41 344 35 346 6.13e-16 78.6
MS.gene72322.t1 MTR_2g079080 25.150 334 195 15 39 342 29 337 6.21e-16 78.6
MS.gene72322.t1 MTR_2g043980 24.590 366 213 14 6 342 8 339 1.23e-15 77.4
MS.gene72322.t1 MTR_2g079090 25.150 334 195 15 39 342 29 337 3.20e-15 76.3
MS.gene72322.t1 MTR_7g113860 25.070 359 214 15 26 346 17 358 3.26e-15 76.6
MS.gene72322.t1 MTR_8g074560 25.356 351 218 14 13 336 6 339 3.35e-15 76.3
MS.gene72322.t1 MTR_5g078210 25.564 266 166 11 42 284 27 283 3.49e-15 75.9
MS.gene72322.t1 MTR_0029s0050 25.373 335 193 16 39 342 29 337 3.55e-15 76.3
MS.gene72322.t1 MTR_0029s0100 26.409 337 187 17 39 342 29 337 4.24e-15 75.9
MS.gene72322.t1 MTR_2g017915 23.511 319 183 10 41 339 34 311 1.54e-14 74.3
MS.gene72322.t1 MTR_8g038680 23.235 340 212 11 37 338 20 348 2.76e-14 73.6
MS.gene72322.t1 MTR_6g007100 22.527 364 225 15 1 336 1 335 9.90e-14 72.0
MS.gene72322.t1 MTR_7g111780 23.457 324 202 7 41 338 37 340 1.85e-13 71.2
MS.gene72322.t1 MTR_5g093090 27.547 265 171 11 41 286 29 291 7.42e-13 68.9
MS.gene72322.t1 MTR_2g015590 27.642 246 146 6 39 256 30 271 1.03e-12 68.6
MS.gene72322.t1 MTR_7g033165 24.478 335 202 13 41 338 34 354 1.81e-12 68.2
MS.gene72322.t1 MTR_1g082390 26.344 372 221 15 9 349 13 362 4.98e-12 67.0
MS.gene72322.t1 MTR_1g030268 23.779 307 192 13 5 284 11 302 9.79e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72322.t1 AT5G03610 52.528 356 155 8 1 348 1 350 8.42e-120 350
MS.gene72322.t1 AT3G09930 48.571 315 150 7 40 348 39 347 6.04e-103 307
MS.gene72322.t1 AT3G09930 48.571 315 150 7 40 348 39 347 6.04e-103 307
MS.gene72322.t1 AT5G03600 42.210 353 172 13 3 346 17 346 2.51e-80 249
MS.gene72322.t1 AT5G03600 42.638 326 162 11 30 346 2 311 2.82e-79 246
MS.gene72322.t1 AT2G36325 38.535 314 176 9 40 346 47 350 2.96e-71 226
MS.gene72322.t1 AT5G03590 37.755 294 130 9 61 348 7 253 2.20e-59 192
MS.gene72322.t1 AT5G03590 31.741 293 118 9 61 348 7 222 2.56e-43 150
MS.gene72322.t1 AT5G03590 42.268 194 102 6 9 199 7 193 1.19e-38 137
MS.gene72322.t1 AT1G53920 27.528 356 225 12 8 344 18 359 1.20e-33 128
MS.gene72322.t1 AT5G41890 29.102 323 196 11 42 338 33 348 1.03e-31 123
MS.gene72322.t1 AT1G20130 30.564 337 198 11 41 352 185 510 1.24e-31 125
MS.gene72322.t1 AT1G20130 30.564 337 198 11 41 352 205 530 1.58e-31 125
MS.gene72322.t1 AT2G40250 28.829 333 194 11 37 342 33 349 3.45e-31 121
MS.gene72322.t1 AT5G08460 29.503 322 188 14 41 337 50 357 1.28e-29 117
MS.gene72322.t1 AT2G30310 28.012 332 202 13 41 349 35 352 3.49e-29 115
MS.gene72322.t1 AT1G58430 28.255 361 221 14 13 349 7 353 1.09e-28 114
MS.gene72322.t1 AT2G31540 28.161 348 207 13 35 353 26 359 1.32e-28 114
MS.gene72322.t1 AT1G20120 30.000 320 189 13 41 339 79 384 1.74e-28 114
MS.gene72322.t1 AT2G19060 28.981 314 194 11 42 342 32 329 2.54e-28 113
MS.gene72322.t1 AT2G04570 29.091 330 193 11 41 346 29 341 2.74e-28 113
MS.gene72322.t1 AT1G28640 27.624 362 210 12 11 337 8 352 4.80e-28 113
MS.gene72322.t1 AT3G14820 28.313 332 211 10 30 346 22 341 9.62e-28 112
MS.gene72322.t1 AT5G45950 27.557 352 224 12 8 342 6 343 1.15e-27 111
MS.gene72322.t1 AT1G20132 27.515 338 216 10 35 354 56 382 1.47e-27 112
MS.gene72322.t1 AT1G75890 29.118 340 199 12 35 349 42 364 2.87e-27 110
MS.gene72322.t1 AT1G75890 29.118 340 199 12 35 349 71 393 3.60e-27 110
MS.gene72322.t1 AT4G10950 28.750 320 189 14 41 337 72 375 7.98e-27 110
MS.gene72322.t1 AT5G42170 27.640 322 205 10 41 346 51 360 1.09e-26 109
MS.gene72322.t1 AT1G29660 27.606 355 210 16 12 342 9 340 1.43e-26 108
MS.gene72322.t1 AT1G33811 27.119 354 216 12 8 336 6 342 2.22e-26 108
MS.gene72322.t1 AT2G03980 26.814 317 195 12 41 336 44 344 5.03e-26 107
MS.gene72322.t1 AT2G03980 26.814 317 195 12 41 336 44 344 5.03e-26 107
MS.gene72322.t1 AT2G03980 26.814 317 195 12 41 336 44 344 5.03e-26 107
MS.gene72322.t1 AT2G03980 26.814 317 195 12 41 336 44 344 5.03e-26 107
MS.gene72322.t1 AT1G75920 27.557 352 211 12 15 346 7 334 5.08e-26 107
MS.gene72322.t1 AT1G71691 27.245 323 184 10 41 336 56 354 6.94e-26 107
MS.gene72322.t1 AT1G71250 25.868 317 202 10 40 336 41 344 7.59e-26 107
MS.gene72322.t1 AT1G59406 25.824 364 231 11 10 354 5 348 1.19e-25 106
MS.gene72322.t1 AT1G59030 25.824 364 231 11 10 354 5 348 1.19e-25 106
MS.gene72322.t1 AT1G58725 25.824 364 231 11 10 354 5 348 1.19e-25 106
MS.gene72322.t1 AT5G40990 29.022 317 194 12 41 336 38 344 1.29e-25 106
MS.gene72322.t1 AT5G15720 27.864 323 194 13 38 336 28 335 2.11e-25 105
MS.gene72322.t1 AT1G06990 25.225 333 215 11 41 352 38 357 2.25e-25 105
MS.gene72322.t1 AT1G75880 28.571 371 223 12 7 353 20 372 2.60e-25 105
MS.gene72322.t1 AT1G75890 27.762 353 200 12 35 349 42 377 3.28e-25 105
MS.gene72322.t1 AT2G27360 27.273 341 195 9 39 342 32 356 7.30e-25 104
MS.gene72322.t1 AT3G14225 28.571 336 201 14 26 336 23 344 8.02e-25 104
MS.gene72322.t1 AT2G42990 28.045 353 197 14 10 336 10 331 8.78e-25 103
MS.gene72322.t1 AT5G33370 26.124 356 224 13 14 346 4 343 9.68e-25 103
MS.gene72322.t1 AT3G14225 28.235 340 201 14 26 336 23 348 1.23e-24 103
MS.gene72322.t1 AT1G29670 26.225 347 216 13 12 338 9 335 1.24e-24 103
MS.gene72322.t1 AT5G18430 28.086 324 190 12 39 336 27 333 1.97e-24 102
MS.gene72322.t1 AT1G75900 26.111 360 236 10 13 355 18 364 2.08e-24 102
MS.gene72322.t1 AT2G24560 27.410 332 200 16 41 347 35 350 2.46e-24 102
MS.gene72322.t1 AT4G10950 28.438 320 186 15 41 337 72 371 2.77e-24 103
MS.gene72322.t1 AT1G29670 26.225 347 216 13 12 338 77 403 2.79e-24 103
MS.gene72322.t1 AT1G75880 28.415 366 231 13 7 353 20 373 2.88e-24 102
MS.gene72322.t1 AT3G53100 26.126 333 217 11 40 354 29 350 3.05e-24 102
MS.gene72322.t1 AT5G22810 29.341 334 206 10 41 354 35 358 4.39e-24 102
MS.gene72322.t1 AT2G30220 25.904 332 209 12 41 349 34 351 5.55e-24 101
MS.gene72322.t1 AT1G54020 29.513 349 200 15 7 341 9 325 6.12e-24 101
MS.gene72322.t1 AT1G75930 25.610 328 203 10 35 342 24 330 8.64e-24 100
MS.gene72322.t1 AT1G73610 27.515 338 187 16 35 346 30 335 9.97e-24 100
MS.gene72322.t1 AT4G26790 27.859 341 199 13 41 354 30 350 1.08e-23 100
MS.gene72322.t1 AT4G26790 27.859 341 199 13 41 354 30 350 1.08e-23 100
MS.gene72322.t1 AT5G45960 27.893 337 204 12 36 347 43 365 1.49e-23 100
MS.gene72322.t1 AT1G54030 27.796 313 184 12 38 336 50 334 2.60e-23 100
MS.gene72322.t1 AT1G28650 24.798 371 227 13 7 342 6 359 3.62e-23 99.8
MS.gene72322.t1 AT1G28570 25.519 337 205 11 36 339 30 353 4.33e-23 99.4
MS.gene72322.t1 AT1G58520 25.797 345 205 11 34 354 24 341 8.30e-23 98.2
MS.gene72322.t1 AT1G58525 25.797 345 205 11 34 354 24 341 8.30e-23 98.2
MS.gene72322.t1 AT1G20135 26.012 346 215 11 13 342 6 326 1.07e-22 97.4
MS.gene72322.t1 AT3G48460 27.926 376 217 16 1 342 1 356 1.23e-22 98.2
MS.gene72322.t1 AT1G54000 27.011 348 221 13 1 336 2 328 1.76e-22 97.8
MS.gene72322.t1 AT5G45670 24.528 318 205 10 42 338 31 334 2.55e-22 97.1
MS.gene72322.t1 AT1G75920 26.431 367 211 13 15 346 2 344 3.14e-22 96.7
MS.gene72322.t1 AT5G45910 28.280 343 193 13 39 342 29 357 5.03e-22 96.3
MS.gene72322.t1 AT5G33370 30.328 244 142 10 38 259 28 265 5.50e-22 95.5
MS.gene72322.t1 AT1G54010 26.857 350 223 14 1 338 2 330 7.55e-22 95.9
MS.gene72322.t1 AT1G28670 25.000 368 223 13 11 342 8 358 1.13e-21 95.5
MS.gene72322.t1 AT1G28610 26.611 357 187 15 39 348 30 358 1.79e-21 94.7
MS.gene72322.t1 AT1G53940 25.634 355 236 13 1 336 1 346 2.30e-21 94.4
MS.gene72322.t1 AT5G15720 28.519 270 164 11 38 284 28 291 3.55e-21 92.8
MS.gene72322.t1 AT1G28600 24.484 339 205 11 39 342 30 352 4.21e-21 94.0
MS.gene72322.t1 AT4G01130 26.862 376 210 17 3 338 6 356 4.23e-21 93.6
MS.gene72322.t1 AT1G75910 25.352 355 219 12 13 346 5 334 4.80e-21 93.2
MS.gene72322.t1 AT5G55050 24.847 326 213 11 41 344 40 355 6.23e-21 93.2
MS.gene72322.t1 AT1G28590 24.928 345 209 11 39 348 35 364 6.79e-21 93.6
MS.gene72322.t1 AT4G28780 25.982 331 212 11 36 346 27 344 8.23e-21 92.8
MS.gene72322.t1 AT3G04290 25.075 335 206 12 38 346 27 342 8.47e-21 92.8
MS.gene72322.t1 AT1G71120 24.412 340 215 12 41 354 32 355 1.11e-20 92.4
MS.gene72322.t1 AT1G71691 28.309 272 152 9 40 284 55 310 1.21e-20 91.7
MS.gene72322.t1 AT3G16370 26.301 346 193 13 41 351 31 349 1.51e-20 91.7
MS.gene72322.t1 AT1G28580 25.000 336 202 10 39 339 36 356 3.03e-20 91.3
MS.gene72322.t1 AT3G14220 27.445 317 200 14 41 344 33 332 3.28e-20 90.9
MS.gene72322.t1 AT4G18970 23.975 317 206 10 42 337 30 332 3.68e-20 91.3
MS.gene72322.t1 AT4G18970 23.975 317 206 10 42 337 30 332 4.55e-20 90.5
MS.gene72322.t1 AT2G19050 28.395 324 198 14 42 351 33 336 4.87e-20 90.5
MS.gene72322.t1 AT2G19010 27.937 315 186 15 41 337 31 322 1.23e-19 89.0
MS.gene72322.t1 AT2G19010 27.937 315 186 15 41 337 61 352 2.07e-19 89.0
MS.gene72322.t1 AT3G50400 24.383 324 206 11 42 338 36 347 2.74e-19 88.6
MS.gene72322.t1 AT5G03820 27.381 336 209 13 41 354 34 356 3.15e-19 88.2
MS.gene72322.t1 AT1G23500 26.332 319 190 9 41 339 36 329 3.56e-19 87.8
MS.gene72322.t1 AT5G03820 27.381 336 209 13 41 354 62 384 3.63e-19 88.2
MS.gene72322.t1 AT1G75920 25.333 300 185 9 65 346 28 306 9.90e-19 86.3
MS.gene72322.t1 AT1G54030 28.800 250 150 10 38 275 50 283 1.92e-18 85.1
MS.gene72322.t1 AT5G03810 26.567 335 214 12 40 354 30 352 2.17e-18 85.5
MS.gene72322.t1 AT5G37690 23.585 318 206 13 42 338 29 330 2.76e-18 85.5
MS.gene72322.t1 AT2G24560 28.205 273 167 14 41 290 35 301 3.40e-18 84.7
MS.gene72322.t1 AT3G14210 25.559 313 205 12 37 336 33 330 4.47e-18 85.1
MS.gene72322.t1 AT2G19050 31.148 244 147 11 42 271 33 269 8.12e-18 82.8
MS.gene72322.t1 AT1G31550 24.419 344 211 10 39 348 35 363 3.10e-17 82.8
MS.gene72322.t1 AT4G30140 27.273 308 191 13 42 336 35 322 5.12e-17 81.6
MS.gene72322.t1 AT1G54790 26.829 328 197 13 44 338 36 353 1.31e-16 80.9
MS.gene72322.t1 AT1G53940 25.939 293 196 10 9 284 8 296 1.63e-16 79.7
MS.gene72322.t1 AT1G28660 23.243 370 226 14 11 342 8 357 3.02e-16 79.7
MS.gene72322.t1 AT1G31550 24.709 344 207 12 39 348 35 360 9.67e-16 78.2
MS.gene72322.t1 AT5G14450 25.068 367 216 14 8 338 19 362 1.13e-15 77.8
MS.gene72322.t1 AT5G63170 24.286 350 213 15 11 339 4 322 1.15e-15 77.4
MS.gene72322.t1 AT1G28660 23.913 368 225 13 11 342 8 356 1.49e-15 77.4
MS.gene72322.t1 AT3G27950 24.798 371 213 14 16 346 10 354 2.58e-15 76.6
MS.gene72322.t1 AT2G04020 25.943 212 137 7 41 237 44 250 2.67e-15 75.5
MS.gene72322.t1 AT3G26430 22.691 379 239 13 4 346 2 362 4.07e-15 76.3
MS.gene72322.t1 AT1G56670 24.728 368 215 13 7 342 13 350 5.67e-15 75.9
MS.gene72322.t1 AT1G53990 26.582 316 196 13 41 336 36 335 9.22e-15 75.1
MS.gene72322.t1 AT4G01130 27.393 303 166 13 15 284 16 297 1.95e-14 73.9
MS.gene72322.t1 AT1G54790 25.341 367 229 14 13 346 6 360 2.39e-14 73.9
MS.gene72322.t1 AT2G31550 25.359 209 132 8 157 353 22 218 4.42e-14 71.2
MS.gene72322.t1 AT5G37690 22.956 318 200 14 42 338 29 322 1.30e-13 71.6
MS.gene72322.t1 AT1G09390 22.581 372 224 10 4 342 7 347 4.08e-13 70.1
MS.gene72322.t1 AT1G71691 25.263 190 117 5 157 336 79 253 4.36e-13 69.3
MS.gene72322.t1 AT1G56670 25.086 291 172 9 7 271 13 283 3.13e-11 63.9
MS.gene72322.t1 AT5G15720 23.810 273 172 11 88 338 48 306 4.84e-11 63.5
MS.gene72322.t1 AT1G54020 26.141 241 156 9 109 341 13 239 9.84e-11 62.4
MS.gene72322.t1 AT1G54020 26.141 241 156 9 109 341 13 239 9.84e-11 62.4
MS.gene72322.t1 AT1G54020 26.141 241 156 9 109 341 13 239 9.84e-11 62.4

Find 85 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCAATCACTCACAATTTA+TGG 0.125010 1.4:+49592337 MS.gene72322:CDS
ATCCTGAATCAACTTTCTTT+TGG 0.172349 1.4:+49594046 MS.gene72322:CDS
ATATTGTGCAGCCAAGTATT+TGG 0.194450 1.4:+49592305 MS.gene72322:intron
AAATGACTACAATTATTATT+TGG 0.197824 1.4:+49592554 MS.gene72322:CDS
CCTAAGCATGATTTGAAGTA+TGG 0.231574 1.4:+49592375 MS.gene72322:CDS
CACTTTCCATGAATCAAATA+TGG 0.233377 1.4:-49591721 None:intergenic
AAATAAGGTTAAGAAATATT+TGG 0.254696 1.4:+49594014 MS.gene72322:CDS
TTCTTGAATGAGCTTGATTA+AGG 0.268085 1.4:-49592475 None:intergenic
TATAGATTTGGTGATATCTA+AGG 0.293511 1.4:-49592511 None:intergenic
TTGATTTGGGTTGTCACATT+TGG 0.325477 1.4:-49592450 None:intergenic
TACAATTATTATTTGGAAAC+AGG 0.326642 1.4:+49592561 MS.gene72322:CDS
TAGTGTGATCATTGGTTTCT+TGG 0.330817 1.4:-49593849 None:intergenic
TCCCAAAAGAAAGTTGATTC+AGG 0.340517 1.4:-49594048 None:intergenic
GGAAACAGGAGGAGCTTTCC+TGG 0.342315 1.4:+49592575 MS.gene72322:CDS
GCTTGATTAAGGAATTGATT+TGG 0.343968 1.4:-49592464 None:intergenic
CTTGATTAAGGAATTGATTT+GGG 0.349009 1.4:-49592463 None:intergenic
GGAGATTCGTATGTTGATAC+TGG 0.351430 1.4:+49591684 MS.gene72322:CDS
TCCTCAATGTTATGGCTAGA+AGG 0.358556 1.4:-49593922 None:intergenic
TATTGTGCAGCCAAGTATTT+GGG 0.361299 1.4:+49592306 MS.gene72322:intron
ATTTATTGTTATAGGACAAA+TGG 0.369048 1.4:+49591602 MS.gene72322:intron
CCGGGAAAGGTTATACCATA+TGG 0.372909 1.4:-49591744 None:intergenic
ATAGCTTATGTCTCTGTTGC+TGG 0.375543 1.4:+49592531 MS.gene72322:CDS
TCAAACGTTCCTCAATGTTA+TGG 0.386495 1.4:-49593930 None:intergenic
TTGTAACAGATTGGTTCAAT+AGG 0.391183 1.4:-49593819 None:intergenic
TTGATTCATCTTCAAAGCTT+AGG 0.395738 1.4:+49593676 MS.gene72322:CDS
CTTAGTACTTGTACTTCTCT+CGG 0.399012 1.4:+49591382 MS.gene72322:CDS
CCATATGGTATAACCTTTCC+CGG 0.405108 1.4:+49591744 MS.gene72322:CDS
GCTTTGAAGATGAATCAAAT+TGG 0.421198 1.4:-49593671 None:intergenic
TTTATTGTTATAGGACAAAT+GGG 0.421688 1.4:+49591603 MS.gene72322:intron
GGTTTAACTTTGTAACAGAT+TGG 0.423602 1.4:-49593828 None:intergenic
ATCACTGATTCAATGAAAGA+TGG 0.426419 1.4:-49593634 None:intergenic
TGATTTCAATCCCAAATACT+TGG 0.428800 1.4:-49592316 None:intergenic
AGAGACATAAGCTATAGATT+TGG 0.442979 1.4:-49592523 None:intergenic
TTCCATAAATTGTGAGTGAT+TGG 0.450712 1.4:-49592339 None:intergenic
TTAGTACTTGTACTTCTCTC+GGG 0.460688 1.4:+49591383 MS.gene72322:CDS
AACTTTGCCTACGGTGGTAC+AGG 0.462242 1.4:+49592402 MS.gene72322:CDS
TGTGAATGTAGTGTGATCAT+TGG 0.468089 1.4:-49593857 None:intergenic
CATTCCAACCAGCCTGTGTT+GGG 0.469175 1.4:-49594080 None:intergenic
GATTCATGGAAAGTGCCATA+TGG 0.480026 1.4:+49591729 MS.gene72322:CDS
CCGTCGGAGAATCTCCCAAC+TGG 0.483926 1.4:-49591771 None:intergenic
ACTATTGCAACTTTGAAATG+AGG 0.493039 1.4:-49593764 None:intergenic
ATTGGTTCAATAGGTTATTG+TGG 0.494824 1.4:-49593810 None:intergenic
GTGGGTGGTTTACAACCCCT+TGG 0.497950 1.4:+49593715 MS.gene72322:CDS
GTATTTGAAGTATCTTCTAC+AGG 0.500978 1.4:+49592426 MS.gene72322:CDS
GTACTAAGGAAATACATAAG+AGG 0.508935 1.4:-49591367 None:intergenic
CGAGAGAAGTACAAGTACTA+AGG 0.511389 1.4:-49591381 None:intergenic
AGGATTTGAGAGAATTGTTG+TGG 0.513789 1.4:+49593696 MS.gene72322:CDS
CCATACTTCAAATCATGCTT+AGG 0.514717 1.4:-49592375 None:intergenic
AAATACATAAGAGGATGAAA+AGG 0.520781 1.4:-49591358 None:intergenic
GGATTTGAGAGAATTGTTGT+GGG 0.524711 1.4:+49593697 MS.gene72322:CDS
ACCTTTCCCGGAAAACCAGT+TGG 0.524855 1.4:+49591756 MS.gene72322:CDS
TCTAGTATAAAATTTGATGA+AGG 0.538645 1.4:-49594131 None:intergenic
CCTTTCCCGGAAAACCAGTT+GGG 0.540500 1.4:+49591757 MS.gene72322:CDS
CGTTTGAAGCCATGTTGTGT+TGG 0.542619 1.4:+49593946 MS.gene72322:CDS
GATGGCGAGTGGCCTCAACT+TGG 0.543752 1.4:-49591629 None:intergenic
TCACTGATTCAATGAAAGAT+GGG 0.544882 1.4:-49593633 None:intergenic
GCATTCCAACCAGCCTGTGT+TGG 0.545563 1.4:-49594081 None:intergenic
CCTCAATGTTATGGCTAGAA+GGG 0.549531 1.4:-49593921 None:intergenic
GGCTTGAGGAAGACAACCAA+GGG 0.551381 1.4:-49593731 None:intergenic
TGCACCCAACACAGGCTGGT+TGG 0.551991 1.4:+49594076 MS.gene72322:CDS
GAATGCTGTGTATAATGAGT+TGG 0.561108 1.4:+49594098 MS.gene72322:CDS
ATAGATTTGGTGATATCTAA+GGG 0.561248 1.4:-49592510 None:intergenic
TTGAAATGAGGTTTCAGCAG+TGG 0.574553 1.4:-49593752 None:intergenic
CTGCTTAGTCCAACACAACA+TGG 0.575531 1.4:-49593955 None:intergenic
AATTATTATTTGGAAACAGG+AGG 0.583609 1.4:+49592564 MS.gene72322:CDS
CAGTTGCACCCAACACAGGC+TGG 0.587629 1.4:+49594072 MS.gene72322:CDS
TTGAAGATGAATCAAATTGG+TGG 0.592268 1.4:-49593668 None:intergenic
CTAAGCATGATTTGAAGTAT+GGG 0.594118 1.4:+49592376 MS.gene72322:CDS
CCCTTCTAGCCATAACATTG+AGG 0.594859 1.4:+49593921 MS.gene72322:CDS
GTCAGTTAAAACTCTGCCGT+CGG 0.606044 1.4:-49591787 None:intergenic
ACAAATGGGGCTCCAAGTTG+AGG 0.608302 1.4:+49591617 MS.gene72322:CDS
GGTTATTGTGGAGAGCTACA+AGG 0.617827 1.4:-49593798 None:intergenic
GAGGTTTCAGCAGTGGCTTG+AGG 0.618863 1.4:-49593745 None:intergenic
GGATCAGTTGCACCCAACAC+AGG 0.619543 1.4:+49594068 MS.gene72322:CDS
CTAAGCAGTGAGTATAAGTG+TGG 0.621984 1.4:+49593970 MS.gene72322:CDS
TTTGAGAGAATTGTTGTGGG+TGG 0.627998 1.4:+49593700 MS.gene72322:CDS
TATGGGATGAACTTTGCCTA+CGG 0.634972 1.4:+49592393 MS.gene72322:CDS
TATAATGAGTTGGAGAAGAG+AGG 0.639714 1.4:+49594108 MS.gene72322:CDS
AAATACACCTGTACCACCGT+AGG 0.662649 1.4:-49592409 None:intergenic
GGGATGAACTTTGCCTACGG+TGG 0.663668 1.4:+49592396 MS.gene72322:CDS
TGGCTTGAGGAAGACAACCA+AGG 0.680752 1.4:-49593732 None:intergenic
TTATTGTTATAGGACAAATG+GGG 0.695831 1.4:+49591604 MS.gene72322:intron
CCAGTTGGGAGATTCTCCGA+CGG 0.697686 1.4:+49591771 MS.gene72322:CDS
AGGATGATTGAGATGGCGAG+TGG 0.741996 1.4:-49591640 None:intergenic
GCTTGAGGAAGACAACCAAG+GGG 0.783209 1.4:-49593730 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATATATAAAATATGCA+TGG - chr1.4:49593568-49593587 None:intergenic 10.0%
!! ATTAAATTAAATAATTTACC+AGG - chr1.4:49592596-49592615 None:intergenic 10.0%
!! GATAATGATAATTAAAATAT+AGG + chr1.4:49592682-49592701 MS.gene72322:intron 10.0%
!! TAAATATATAAAATATGCAT+GGG - chr1.4:49593567-49593586 None:intergenic 10.0%
!!! AATTGTATTTTATTTTGTTA+GGG - chr1.4:49592757-49592776 None:intergenic 10.0%
!!! ACATTGATAATATATTAATA+AGG - chr1.4:49593085-49593104 None:intergenic 10.0%
!!! CATTGATAATATATTAATAA+GGG - chr1.4:49593084-49593103 None:intergenic 10.0%
!!! TATTTATTTTCTATATTTCT+TGG + chr1.4:49592621-49592640 MS.gene72322:intron 10.0%
!!! TTAACTTTTAATAAATTTGT+TGG - chr1.4:49593200-49593219 None:intergenic 10.0%
!!! TTTTGAAATATACAAATAAA+AGG - chr1.4:49592168-49592187 None:intergenic 10.0%
!! AAATAAGGTTAAGAAATATT+TGG + chr1.4:49594014-49594033 MS.gene72322:CDS 15.0%
!! AAATGACTACAATTATTATT+TGG + chr1.4:49592554-49592573 MS.gene72322:CDS 15.0%
!! AATATATTATCAATGTATCT+TGG + chr1.4:49593089-49593108 MS.gene72322:intron 15.0%
!! AATATCCTTGTAAAAATATA+AGG + chr1.4:49592037-49592056 MS.gene72322:intron 15.0%
!! ATCTTATGATTTATTGTTAT+AGG + chr1.4:49591594-49591613 MS.gene72322:intron 15.0%
!! GTAAAGTAATCTTATAAAAA+GGG + chr1.4:49593250-49593269 MS.gene72322:intron 15.0%
!! TGTAAAGTAATCTTATAAAA+AGG + chr1.4:49593249-49593268 MS.gene72322:intron 15.0%
!! TTGTAAAAATATAAGGAATT+TGG + chr1.4:49592044-49592063 MS.gene72322:intron 15.0%
!!! AAAACAAACAATTTTTTTGA+AGG - chr1.4:49591663-49591682 None:intergenic 15.0%
!!! AAATTCCTTATATTTTTACA+AGG - chr1.4:49592045-49592064 None:intergenic 15.0%
!!! AATAAAAGGTTAATTTGATT+TGG - chr1.4:49592154-49592173 None:intergenic 15.0%
!!! ATAAAAGGTTAATTTGATTT+GGG - chr1.4:49592153-49592172 None:intergenic 15.0%
!!! ATGAATTTATTCACTTTTTT+AGG + chr1.4:49591417-49591436 MS.gene72322:intron 15.0%
!!! ATTGTATTTTATTTTGTTAG+GGG - chr1.4:49592756-49592775 None:intergenic 15.0%
!!! CAATTTTTCATAAACATTTT+AGG + chr1.4:49591479-49591498 MS.gene72322:intron 15.0%
!!! GAATTGTATTTTATTTTGTT+AGG - chr1.4:49592758-49592777 None:intergenic 15.0%
!!! TCAAAAAAATTGTTTGTTTT+TGG + chr1.4:49591663-49591682 MS.gene72322:CDS 15.0%
!!! TGAATTTATTCACTTTTTTA+GGG + chr1.4:49591418-49591437 MS.gene72322:intron 15.0%
!! AATATTTCACACTATTAACA+TGG - chr1.4:49591508-49591527 None:intergenic 20.0%
!! ACATAAATCCATAATTTAGA+AGG + chr1.4:49593517-49593536 MS.gene72322:intron 20.0%
!! ATTTATTGTTATAGGACAAA+TGG + chr1.4:49591602-49591621 MS.gene72322:intron 20.0%
!! CATAAATCCATAATTTAGAA+GGG + chr1.4:49593518-49593537 MS.gene72322:intron 20.0%
!! CCTTACAAATATAACAAATT+TGG - chr1.4:49592218-49592237 None:intergenic 20.0%
!! TAAAAACCATATTTGATTCA+TGG + chr1.4:49591715-49591734 MS.gene72322:CDS 20.0%
!! TACAATTATTATTTGGAAAC+AGG + chr1.4:49592561-49592580 MS.gene72322:CDS 20.0%
!! TAGAAGATAAAATACAAGTT+AGG + chr1.4:49593373-49593392 MS.gene72322:intron 20.0%
!! TGTTACTATTATCATATACT+TGG - chr1.4:49593488-49593507 None:intergenic 20.0%
!! TTGTGTATTCAATTTCATTT+AGG + chr1.4:49591970-49591989 MS.gene72322:intron 20.0%
!! TTTATTGTTATAGGACAAAT+GGG + chr1.4:49591603-49591622 MS.gene72322:intron 20.0%
!!! AATTGACATTTTCAAAATTG+TGG + chr1.4:49593424-49593443 MS.gene72322:intron 20.0%
!!! ATTATGGAAAAAAAAGTACA+AGG - chr1.4:49591889-49591908 None:intergenic 20.0%
!!! ATTCTTTCTATTTTTCGTTT+TGG - chr1.4:49593465-49593484 None:intergenic 20.0%
!!! CCAAATTTGTTATATTTGTA+AGG + chr1.4:49592215-49592234 MS.gene72322:intron 20.0%
!!! TGAATCAAATATGGTTTTTA+TGG - chr1.4:49591715-49591734 None:intergenic 20.0%
! AAATACATAAGAGGATGAAA+AGG - chr1.4:49591361-49591380 None:intergenic 25.0%
! AATTATTATTTGGAAACAGG+AGG + chr1.4:49592564-49592583 MS.gene72322:CDS 25.0%
! AATTTCATTGAATAAACGCA+GGG + chr1.4:49593607-49593626 MS.gene72322:intron 25.0%
! AGTAATCTTATAAAAAGGGA+TGG + chr1.4:49593254-49593273 MS.gene72322:intron 25.0%
! ATCTATCACAATTGTTACAT+AGG - chr1.4:49593354-49593373 None:intergenic 25.0%
! ATGTGAAAGAAACAACATTA+TGG - chr1.4:49591905-49591924 None:intergenic 25.0%
! ATTGAATACACAAAAACACA+AGG - chr1.4:49591963-49591982 None:intergenic 25.0%
! TAATTTCATTGAATAAACGC+AGG + chr1.4:49593606-49593625 MS.gene72322:intron 25.0%
! TTAGAAACCCTTCTAAATTA+TGG - chr1.4:49593528-49593547 None:intergenic 25.0%
! TTATTGTTATAGGACAAATG+GGG + chr1.4:49591604-49591623 MS.gene72322:intron 25.0%
!! ATTTTGTCAAAATTGATGTG+GGG - chr1.4:49592817-49592836 None:intergenic 25.0%
!! CTTGATTAAGGAATTGATTT+GGG - chr1.4:49592466-49592485 None:intergenic 25.0%
!! GATTTTGTCAAAATTGATGT+GGG - chr1.4:49592818-49592837 None:intergenic 25.0%
!! TGATTTTGTCAAAATTGATG+TGG - chr1.4:49592819-49592838 None:intergenic 25.0%
!! TTGATGATAATGCTATTAGA+GGG - chr1.4:49591838-49591857 None:intergenic 25.0%
!!! AATTTGATTTGGGATTTCAA+TGG - chr1.4:49592143-49592162 None:intergenic 25.0%
!!! ATAGATTTGGTGATATCTAA+GGG - chr1.4:49592513-49592532 None:intergenic 25.0%
!!! TATAGATTTGGTGATATCTA+AGG - chr1.4:49592514-49592533 None:intergenic 25.0%
AGAGACATAAGCTATAGATT+TGG - chr1.4:49592526-49592545 None:intergenic 30.0%
CACTTTCCATGAATCAAATA+TGG - chr1.4:49591724-49591743 None:intergenic 30.0%
GCTTGATTAAGGAATTGATT+TGG - chr1.4:49592467-49592486 None:intergenic 30.0%
GTACTAAGGAAATACATAAG+AGG - chr1.4:49591370-49591389 None:intergenic 30.0%
TAAAATGCTGCAACATTATG+TGG + chr1.4:49591926-49591945 MS.gene72322:intron 30.0%
TGATTTCAATCCCAAATACT+TGG - chr1.4:49592319-49592338 None:intergenic 30.0%
TGCAAAAGAGACAATACTTA+GGG - chr1.4:49592785-49592804 None:intergenic 30.0%
TTCCATAAATTGTGAGTGAT+TGG - chr1.4:49592342-49592361 None:intergenic 30.0%
TTCTTGAATGAGCTTGATTA+AGG - chr1.4:49592478-49592497 None:intergenic 30.0%
TTGAAGATGAATCAAATTGG+TGG - chr1.4:49593671-49593690 None:intergenic 30.0%
TTGATTCATCTTCAAAGCTT+AGG + chr1.4:49593676-49593695 MS.gene72322:CDS 30.0%
! ATCCTGAATCAACTTTCTTT+TGG + chr1.4:49594046-49594065 MS.gene72322:CDS 30.0%
! ATTGGTTCAATAGGTTATTG+TGG - chr1.4:49593813-49593832 None:intergenic 30.0%
! CTAAGCATGATTTGAAGTAT+GGG + chr1.4:49592376-49592395 MS.gene72322:CDS 30.0%
! CTTGATGATAATGCTATTAG+AGG - chr1.4:49591839-49591858 None:intergenic 30.0%
! GGTTTAACTTTGTAACAGAT+TGG - chr1.4:49593831-49593850 None:intergenic 30.0%
! GTATTTGAAGTATCTTCTAC+AGG + chr1.4:49592426-49592445 MS.gene72322:CDS 30.0%
! TATTGTCTCTTTTGCAGTTT+TGG + chr1.4:49592789-49592808 MS.gene72322:intron 30.0%
! TCCTGAATCAACTTTCTTTT+GGG + chr1.4:49594047-49594066 MS.gene72322:CDS 30.0%
! TTGACATTTTCGATAGTTTC+AGG + chr1.4:49593884-49593903 MS.gene72322:CDS 30.0%
! TTGTAACAGATTGGTTCAAT+AGG - chr1.4:49593822-49593841 None:intergenic 30.0%
! TTTTGTCAAAATTGATGTGG+GGG - chr1.4:49592816-49592835 None:intergenic 30.0%
!! ACTATTGCAACTTTGAAATG+AGG - chr1.4:49593767-49593786 None:intergenic 30.0%
!! ATCACTGATTCAATGAAAGA+TGG - chr1.4:49593637-49593656 None:intergenic 30.0%
!! GCTTTGAAGATGAATCAAAT+TGG - chr1.4:49593674-49593693 None:intergenic 30.0%
!! TCACTGATTCAATGAAAGAT+GGG - chr1.4:49593636-49593655 None:intergenic 30.0%
!! TTTTTGAAGGATGATTGAGA+TGG - chr1.4:49591650-49591669 None:intergenic 30.0%
AAAAACCATTGGCATAGAGT+TGG + chr1.4:49592110-49592129 MS.gene72322:intron 35.0%
AAGGATGAATTCACATACCA+AGG - chr1.4:49591815-49591834 None:intergenic 35.0%
AGGATTTGAGAGAATTGTTG+TGG + chr1.4:49593696-49593715 MS.gene72322:CDS 35.0%
ATATTGTGCAGCCAAGTATT+TGG + chr1.4:49592305-49592324 MS.gene72322:intron 35.0%
CAAAAGAGACAATACTTAGG+GGG - chr1.4:49592783-49592802 None:intergenic 35.0%
CACCAATCACTCACAATTTA+TGG + chr1.4:49592337-49592356 MS.gene72322:CDS 35.0%
CCATACTTCAAATCATGCTT+AGG - chr1.4:49592378-49592397 None:intergenic 35.0%
CTGCAAAAGAGACAATACTT+AGG - chr1.4:49592786-49592805 None:intergenic 35.0%
CTTAGTACTTGTACTTCTCT+CGG + chr1.4:49591382-49591401 MS.gene72322:CDS 35.0%
GAATGCTGTGTATAATGAGT+TGG + chr1.4:49594098-49594117 MS.gene72322:CDS 35.0%
GCAAAAGAGACAATACTTAG+GGG - chr1.4:49592784-49592803 None:intergenic 35.0%
GCAACTTCCTAATACTTAGA+GGG - chr1.4:49592725-49592744 None:intergenic 35.0%
GGATTTGAGAGAATTGTTGT+GGG + chr1.4:49593697-49593716 MS.gene72322:CDS 35.0%
GTATTAGGAAGTTGCGAATT+TGG + chr1.4:49592730-49592749 MS.gene72322:intron 35.0%
TATACCCATGCAAAAACCAT+TGG + chr1.4:49592099-49592118 MS.gene72322:intron 35.0%
TATTGTGCAGCCAAGTATTT+GGG + chr1.4:49592306-49592325 MS.gene72322:intron 35.0%
TCAAACGTTCCTCAATGTTA+TGG - chr1.4:49593933-49593952 None:intergenic 35.0%
TGTGAATGTAGTGTGATCAT+TGG - chr1.4:49593860-49593879 None:intergenic 35.0%
TTAGTACTTGTACTTCTCTC+GGG + chr1.4:49591383-49591402 MS.gene72322:CDS 35.0%
TTGGCTGCACAATATAAAAG+AGG - chr1.4:49592300-49592319 None:intergenic 35.0%
TTTGTCAAAATTGATGTGGG+GGG - chr1.4:49592815-49592834 None:intergenic 35.0%
! CCTAAGCATGATTTGAAGTA+TGG + chr1.4:49592375-49592394 MS.gene72322:CDS 35.0%
! TATAATGAGTTGGAGAAGAG+AGG + chr1.4:49594108-49594127 MS.gene72322:CDS 35.0%
! TATGCCAATGGTTTTTGCAT+GGG - chr1.4:49592106-49592125 None:intergenic 35.0%
! TCCCAAAAGAAAGTTGATTC+AGG - chr1.4:49594051-49594070 None:intergenic 35.0%
! TGATAATGCTATTAGAGGGA+AGG - chr1.4:49591834-49591853 None:intergenic 35.0%
!! GTTTTGACCCTCTAAGTATT+AGG + chr1.4:49592715-49592734 MS.gene72322:intron 35.0%
!! TAGTGTGATCATTGGTTTCT+TGG - chr1.4:49593852-49593871 None:intergenic 35.0%
!! TTGATTTGGGATTTCAATGG+AGG - chr1.4:49592140-49592159 None:intergenic 35.0%
!! TTGATTTGGGTTGTCACATT+TGG - chr1.4:49592453-49592472 None:intergenic 35.0%
!!! AGAGTTTTAACTGACTTCCT+TGG + chr1.4:49591795-49591814 MS.gene72322:CDS 35.0%
ATAGCTTATGTCTCTGTTGC+TGG + chr1.4:49592531-49592550 MS.gene72322:CDS 40.0%
CCATATGGTATAACCTTTCC+CGG + chr1.4:49591744-49591763 MS.gene72322:CDS 40.0%
CCTCAATGTTATGGCTAGAA+GGG - chr1.4:49593924-49593943 None:intergenic 40.0%
CGCAACTTCCTAATACTTAG+AGG - chr1.4:49592726-49592745 None:intergenic 40.0%
CTAAGCAGTGAGTATAAGTG+TGG + chr1.4:49593970-49593989 MS.gene72322:CDS 40.0%
GGAGATTCGTATGTTGATAC+TGG + chr1.4:49591684-49591703 MS.gene72322:CDS 40.0%
GGTAAACTGACAAGTACAAG+TGG - chr1.4:49591868-49591887 None:intergenic 40.0%
TATGGGATGAACTTTGCCTA+CGG + chr1.4:49592393-49592412 MS.gene72322:CDS 40.0%
TCCTCAATGTTATGGCTAGA+AGG - chr1.4:49593925-49593944 None:intergenic 40.0%
TGACAAAATCAATGCTGACG+TGG + chr1.4:49592828-49592847 MS.gene72322:intron 40.0%
TTGAAATGAGGTTTCAGCAG+TGG - chr1.4:49593755-49593774 None:intergenic 40.0%
TTTGAGAGAATTGTTGTGGG+TGG + chr1.4:49593700-49593719 MS.gene72322:CDS 40.0%
! CGAGAGAAGTACAAGTACTA+AGG - chr1.4:49591384-49591403 None:intergenic 40.0%
! CTATGCCAATGGTTTTTGCA+TGG - chr1.4:49592107-49592126 None:intergenic 40.0%
!! GATTCATGGAAAGTGCCATA+TGG + chr1.4:49591729-49591748 MS.gene72322:CDS 40.0%
AAATACACCTGTACCACCGT+AGG - chr1.4:49592412-49592431 None:intergenic 45.0%
CCCTTCTAGCCATAACATTG+AGG + chr1.4:49593921-49593940 MS.gene72322:CDS 45.0%
CCGGGAAAGGTTATACCATA+TGG - chr1.4:49591747-49591766 None:intergenic 45.0%
CTGCTTAGTCCAACACAACA+TGG - chr1.4:49593958-49593977 None:intergenic 45.0%
GGTTATTGTGGAGAGCTACA+AGG - chr1.4:49593801-49593820 None:intergenic 45.0%
GTCAGTTAAAACTCTGCCGT+CGG - chr1.4:49591790-49591809 None:intergenic 45.0%
GTGAACCAACTCTATGCCAA+TGG - chr1.4:49592118-49592137 None:intergenic 45.0%
! CGTTTGAAGCCATGTTGTGT+TGG + chr1.4:49593946-49593965 MS.gene72322:CDS 45.0%
!!! AATCTCCCAACTGGTTTTCC+GGG - chr1.4:49591765-49591784 None:intergenic 45.0%
!!! GAATCTCCCAACTGGTTTTC+CGG - chr1.4:49591766-49591785 None:intergenic 45.0%
!! AGATTATAAAAATTTAAATA+AGG + chr1.4:49593999-49594018 MS.gene72322:CDS 5.0%
AACTTTGCCTACGGTGGTAC+AGG + chr1.4:49592402-49592421 MS.gene72322:CDS 50.0%
ACAAATGGGGCTCCAAGTTG+AGG + chr1.4:49591617-49591636 MS.gene72322:CDS 50.0%
ACCTTTCCCGGAAAACCAGT+TGG + chr1.4:49591756-49591775 MS.gene72322:CDS 50.0%
AGGATGATTGAGATGGCGAG+TGG - chr1.4:49591643-49591662 None:intergenic 50.0%
CATTCCAACCAGCCTGTGTT+GGG - chr1.4:49594083-49594102 None:intergenic 50.0%
CCTTTCCCGGAAAACCAGTT+GGG + chr1.4:49591757-49591776 MS.gene72322:CDS 50.0%
GCTTGAGGAAGACAACCAAG+GGG - chr1.4:49593733-49593752 None:intergenic 50.0%
GGCTTGAGGAAGACAACCAA+GGG - chr1.4:49593734-49593753 None:intergenic 50.0%
TGGCTTGAGGAAGACAACCA+AGG - chr1.4:49593735-49593754 None:intergenic 50.0%
CCAGTTGGGAGATTCTCCGA+CGG + chr1.4:49591771-49591790 MS.gene72322:CDS 55.0%
GAGGTTTCAGCAGTGGCTTG+AGG - chr1.4:49593748-49593767 None:intergenic 55.0%
GCATTCCAACCAGCCTGTGT+TGG - chr1.4:49594084-49594103 None:intergenic 55.0%
GGAAACAGGAGGAGCTTTCC+TGG + chr1.4:49592575-49592594 MS.gene72322:CDS 55.0%
GGATCAGTTGCACCCAACAC+AGG + chr1.4:49594068-49594087 MS.gene72322:CDS 55.0%
GGGATGAACTTTGCCTACGG+TGG + chr1.4:49592396-49592415 MS.gene72322:CDS 55.0%
GTGGGTGGTTTACAACCCCT+TGG + chr1.4:49593715-49593734 MS.gene72322:CDS 55.0%
!!! CCCAACTGGTTTTCCGGGAA+AGG - chr1.4:49591760-49591779 None:intergenic 55.0%
CAGTTGCACCCAACACAGGC+TGG + chr1.4:49594072-49594091 MS.gene72322:CDS 60.0%
CCGTCGGAGAATCTCCCAAC+TGG - chr1.4:49591774-49591793 None:intergenic 60.0%
GATGGCGAGTGGCCTCAACT+TGG - chr1.4:49591632-49591651 None:intergenic 60.0%
TGCACCCAACACAGGCTGGT+TGG + chr1.4:49594076-49594095 MS.gene72322:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 49591341 49594152 49591341 ID=MS.gene72322
chr1.4 mRNA 49591341 49594152 49591341 ID=MS.gene72322.t1;Parent=MS.gene72322
chr1.4 exon 49591341 49591404 49591341 ID=MS.gene72322.t1.exon1;Parent=MS.gene72322.t1
chr1.4 CDS 49591341 49591404 49591341 ID=cds.MS.gene72322.t1;Parent=MS.gene72322.t1
chr1.4 exon 49591616 49591816 49591616 ID=MS.gene72322.t1.exon2;Parent=MS.gene72322.t1
chr1.4 CDS 49591616 49591816 49591616 ID=cds.MS.gene72322.t1;Parent=MS.gene72322.t1
chr1.4 exon 49592316 49592596 49592316 ID=MS.gene72322.t1.exon3;Parent=MS.gene72322.t1
chr1.4 CDS 49592316 49592596 49592316 ID=cds.MS.gene72322.t1;Parent=MS.gene72322.t1
chr1.4 exon 49593628 49594152 49593628 ID=MS.gene72322.t1.exon4;Parent=MS.gene72322.t1
chr1.4 CDS 49593628 49594152 49593628 ID=cds.MS.gene72322.t1;Parent=MS.gene72322.t1
Gene Sequence

>MS.gene72322

ATGGACTCACAAAAGCACCTTTTCATCCTCTTATGTATTTCCTTAGTACTTGTACTTCTCTCGGGTATATATTACTATGAATTTATTCACTTTTTTAGGGAAATACGTTTATGAATTTATGATCATAAAATGTTAATACAATTTTTCATAAACATTTTAGGAAGCCATGTTAATAGTGTGAAATATTCACTTGTTTTGTCGATGACTATTAATAATCAATAGATATTCAGCTTTCTAAACTAATTAAATGTACATCTTATGATTTATTGTTATAGGACAAATGGGGCTCCAAGTTGAGGCCACTCGCCATCTCAATCATCCTTCAAAAAAATTGTTTGTTTTTGGAGATTCGTATGTTGATACTGGCAACTCCATAAAAACCATATTTGATTCATGGAAAGTGCCATATGGTATAACCTTTCCCGGAAAACCAGTTGGGAGATTCTCCGACGGCAGAGTTTTAACTGACTTCCTTGGTATGTGAATTCATCCTTCCCTCTAATAGCATTATCATCAAGTATATACCACTTGTACTTGTCAGTTTACCTTGTACTTTTTTTTCCATAATGTTGTTTCTTTCACATGTAAAATGCTGCAACATTATGTGGTGTTTGTGTTGCCTTGTGTTTTTGTGTATTCAATTTCATTTAGGCAGTTATCTTCTAAAGTTAACAACTCATTTTAAAGAGTAAAATAAATATCCTTGTAAAAATATAAGGAATTTGGACATTGATCGTTGTAAAAATATTTTTTTGAAATATACCCATGCAAAAACCATTGGCATAGAGTTGGTTCACCTCCATTGAAATCCCAAATCAAATTAACCTTTTATTTGTATATTTCAAAAAAAAAATATTTTTACAAAGATCAAAATCCAAATTTGTTATATTTGTAAGGATTAAATGCATATTTTAGTCTTTCTTTATTAGTGTTTGCTTTCTCTTTTAATTATGCTTCCTCTTTTATATTGTGCAGCCAAGTATTTGGGATTGAAATCACCAATCACTCACAATTTATGGAATACTAATACAGTGCCTAAGCATGATTTGAAGTATGGGATGAACTTTGCCTACGGTGGTACAGGTGTATTTGAAGTATCTTCTACAGGACCAAATGTGACAACCCAAATCAATTCCTTAATCAAGCTCATTCAAGAAAATGTCTACACTCCCTTAGATATCACCAAATCTATAGCTTATGTCTCTGTTGCTGGAAATGACTACAATTATTATTTGGAAACAGGAGGAGCTTTCCTGGTAAATTATTTAATTTAATCATCATATTTATTTTCTATATTTCTTGGATGTATAATATGAGACTCAATGATTAAGAAATTAAGATGATAATGATAATTAAAATATAGGCTTAATAACAGTTTTGACCCTCTAAGTATTAGGAAGTTGCGAATTTGGCCCCTAACAAAATAAAATACAATTCATCCCCCTAAGTATTGTCTCTTTTGCAGTTTTGGCCCCCCACATCAATTTTGACAAAATCAATGCTGACGTGGACGCTATGTGTGTAATTTTTTAATATTTTTTTAATCATTTTTATAAAAAAAATTAATTAAAAATAAAAAAATTAATTTTTTATTTATTTTTATTTTTTAATAATTATTTGTTAACTTTTTTTACAAAAAAAAAAGTTGTCTTTTTCAAAAATATTTTTTTTTGTCTCTAGATATAAGACTATTTACAAATTTTAATTAAGATGCATTTATCACTTTTTTTTCAAGTGTAGCCCTTATTAATATATTATCAATGTATCTTGGAATATTAAAAGTTAACAAATAAATATATCTGTATACAAAGAACAATTTGATAATAGTCATATATATTTATGACAAGTTTATTACTCCAACAAATTTATTAAAAGTTAACAATAATATATTTATACACTCGTGATTTTTGTAAAGTAATCTTATAAAAAGGGATGGATAGAGCAAATAAGTTTTCAATTATCATTGCATAACATTAGCACAATATTTCAAAGTTATAAAGATAAAGCACTCCTATGTAACAATTGTGATAGATAGAAGATAAAATACAAGTTAGGAAAAATGTATTTTTGAAAATAAAAAAAAAATTGACATTTTCAAAATTGTGGAACTGAAGATGAAAACCAAAACGAAAAATAGAAAGAATCCAAGTATATGATAATAGTAACATACTGAAAAACATAAATCCATAATTTAGAAGGGTTTCTAAAAAAAAAAAAATTGCACCCATGCATATTTTATATATTTATGAATGAATGTTAACAAAATAATTTCATTGAATAAACGCAGGGTTTCCCATCTTTCATTGAATCAGTGATTGAACAAACAACCACCAATTTGATTCATCTTCAAAGCTTAGGATTTGAGAGAATTGTTGTGGGTGGTTTACAACCCCTTGGTTGTCTTCCTCAAGCCACTGCTGAAACCTCATTTCAAAGTTGCAATAGTACATTTAATGACCTTGTAGCTCTCCACAATAACCTATTGAACCAATCTGTTACAAAGTTAAACCAAGAAACCAATGATCACACTACATTCACAATTCTTGACATTTTCGATAGTTTCAGGTCAGTGTTGAATCACCCTTCTAGCCATAACATTGAGGAACGTTTGAAGCCATGTTGTGTTGGACTAAGCAGTGAGTATAAGTGTGGAAGTGTAGATTATAAAAATTTAAATAAGGTTAAGAAATATTTGGTTTGTGAAAATCCTGAATCAACTTTCTTTTGGGATCAGTTGCACCCAACACAGGCTGGTTGGAATGCTGTGTATAATGAGTTGGAGAAGAGAGGCCTTCATCAAATTTTATACTAG
Protein sequence

>MS.gene72322.t1

MDSQKHLFILLCISLVLVLLSGQMGLQVEATRHLNHPSKKLFVFGDSYVDTGNSIKTIFDSWKVPYGITFPGKPVGRFSDGRVLTDFLAKYLGLKSPITHNLWNTNTVPKHDLKYGMNFAYGGTGVFEVSSTGPNVTTQINSLIKLIQENVYTPLDITKSIAYVSVAGNDYNYYLETGGAFLGFPSFIESVIEQTTTNLIHLQSLGFERIVVGGLQPLGCLPQATAETSFQSCNSTFNDLVALHNNLLNQSVTKLNQETNDHTTFTILDIFDSFRSVLNHPSSHNIEERLKPCCVGLSSEYKCGSVDYKNLNKVKKYLVCENPESTFFWDQLHPTQAGWNAVYNELEKRGLHQILY