Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72335.t1 | XP_024638523.1 | 99 | 199 | 2 | 0 | 1 | 199 | 160 | 358 | 4.90E-104 | 387.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72335.t1 | Q8VYJ2 | 71.0 | 200 | 50 | 6 | 1 | 196 | 160 | 355 | 1.1e-67 | 257.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72335.t1 | G7JK75 | 99.0 | 199 | 2 | 0 | 1 | 199 | 134 | 332 | 3.5e-104 | 387.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050060 | MS.gene72335 | -0.802507 | 5.43E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene72335 | -0.805938 | 1.05E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene72335 | 0.832689 | 8.19E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 59 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGTCAGCCCGATTCTTC+TGG | 0.153062 | 8.4:-22981996 | MS.gene72335:CDS |
| ACATCATGCTTCTGATTTCT+TGG | 0.217240 | 8.4:+22981155 | None:intergenic |
| TTTGAAATTCTGTCTTTATC+TGG | 0.274522 | 8.4:-22981769 | MS.gene72335:CDS |
| TTCGTCAGCCCGATTCTTCT+GGG | 0.316075 | 8.4:-22981995 | MS.gene72335:CDS |
| GATATTAATGTGTCTCTTCC+TGG | 0.316878 | 8.4:-22980993 | MS.gene72335:CDS |
| CTTCCTTCCGTGGAGATAAT+TGG | 0.333200 | 8.4:-22981058 | MS.gene72335:CDS |
| GTTCCTCCTCCACTTTCATT+TGG | 0.347793 | 8.4:+22981736 | None:intergenic |
| AGGCGGCATGAGTGTGTCTT+TGG | 0.382271 | 8.4:-22981701 | MS.gene72335:CDS |
| CGGAGGAGTAGCTGGTTTGT+TGG | 0.386323 | 8.4:-22981653 | MS.gene72335:CDS |
| AGAAAATGAAATAACCTTCA+TGG | 0.401967 | 8.4:+22982079 | None:intergenic |
| GAATGGGTCCCTTGCTCTGT+TGG | 0.411486 | 8.4:-22982415 | MS.gene72335:CDS |
| TTATCCTTTGCATCCGATGC+TGG | 0.421865 | 8.4:+22981026 | None:intergenic |
| GGAGGAACACGAAGCAGATC+AGG | 0.444348 | 8.4:-22981721 | MS.gene72335:CDS |
| GTTGTTGGCGGAGGAGTAGC+TGG | 0.461135 | 8.4:-22981661 | MS.gene72335:CDS |
| GTATGCATTCTTTCAGCAAA+TGG | 0.463040 | 8.4:-22982038 | MS.gene72335:CDS |
| AGTCCTGATGGACGTGTTGT+TGG | 0.477746 | 8.4:-22981676 | MS.gene72335:CDS |
| TTCTTGGCTTCTGCTCATGT+TGG | 0.484881 | 8.4:+22981171 | None:intergenic |
| CCGCCAACAACACGTCCATC+AGG | 0.492937 | 8.4:+22981673 | None:intergenic |
| GTAGGGATGGGAACAACAGC+AGG | 0.496848 | 8.4:+22981113 | None:intergenic |
| CACATCATCACTGTTAATGC+TGG | 0.504861 | 8.4:-22982376 | MS.gene72335:CDS |
| GATAGAATAAATACCTGCAC+TGG | 0.507918 | 8.4:+22981619 | None:intergenic |
| GAAGTTACTGATGATAGAAT+AGG | 0.508118 | 8.4:+22981077 | None:intergenic |
| TACTGGATCAAGAGTAGGGA+TGG | 0.511973 | 8.4:+22981100 | None:intergenic |
| TCCTTATGAAATTAGCCTCC+AGG | 0.516288 | 8.4:+22980975 | None:intergenic |
| ATGTTAGGATGTTACCATGA+AGG | 0.517184 | 8.4:-22982093 | MS.gene72335:intron |
| ACTGATGATAGAATAGGTAC+TGG | 0.519373 | 8.4:+22981083 | None:intergenic |
| TCGTCAGCCCGATTCTTCTG+GGG | 0.541650 | 8.4:-22981994 | MS.gene72335:CDS |
| CAGCATTAACAGTGATGATG+TGG | 0.544475 | 8.4:+22982377 | None:intergenic |
| AGGAGTAGCTGGTTTGTTGG+TGG | 0.545177 | 8.4:-22981650 | MS.gene72335:CDS |
| ATAGGTACTGGATCAAGAGT+AGG | 0.547053 | 8.4:+22981095 | None:intergenic |
| CCTGATGGACGTGTTGTTGG+CGG | 0.547329 | 8.4:-22981673 | MS.gene72335:CDS |
| GGTGGCTGCAAGTCCAGTGC+AGG | 0.550883 | 8.4:-22981632 | MS.gene72335:intron |
| ATGCCAAATGAAAGTGGAGG+AGG | 0.551611 | 8.4:-22981739 | MS.gene72335:CDS |
| GTGTCTTTGGCAAGTCCTGA+TGG | 0.556787 | 8.4:-22981688 | MS.gene72335:CDS |
| TCGTTCATGCCAAATGAAAG+TGG | 0.559940 | 8.4:-22981745 | MS.gene72335:CDS |
| AAATTTGAACCAACAGAGCA+AGG | 0.567744 | 8.4:+22982406 | None:intergenic |
| TAGGTACTGGATCAAGAGTA+GGG | 0.580504 | 8.4:+22981096 | None:intergenic |
| CGTCAGCCCGATTCTTCTGG+GGG | 0.586127 | 8.4:-22981993 | MS.gene72335:CDS |
| GACACATTAATATCAGCAGC+GGG | 0.589557 | 8.4:+22981002 | None:intergenic |
| CATCACTGTTAATGCTGGAG+AGG | 0.596487 | 8.4:-22982371 | MS.gene72335:intron |
| AATTTGAACCAACAGAGCAA+GGG | 0.597677 | 8.4:+22982407 | None:intergenic |
| TTGGTCTGCTGTGCCAGCAT+CGG | 0.597910 | 8.4:-22981039 | MS.gene72335:CDS |
| GATGGACGTGTTGTTGGCGG+AGG | 0.605100 | 8.4:-22981670 | MS.gene72335:CDS |
| TGTGCCAGCATCGGATGCAA+AGG | 0.609579 | 8.4:-22981030 | MS.gene72335:CDS |
| TCATCAGTAACTTCCTTCCG+TGG | 0.610671 | 8.4:-22981068 | MS.gene72335:CDS |
| GAAAGAATGCATACCGCTCG+AGG | 0.613852 | 8.4:+22982047 | None:intergenic |
| TGTATCTACCAGGTAGTGGT+TGG | 0.624215 | 8.4:-22981212 | MS.gene72335:intron |
| AGACCAATTATCTCCACGGA+AGG | 0.635192 | 8.4:+22981055 | None:intergenic |
| TTCTCAGCAAGGACCTCGAG+CGG | 0.641808 | 8.4:-22982060 | MS.gene72335:CDS |
| AGCATTAACAGTGATGATGT+GGG | 0.643782 | 8.4:+22982378 | None:intergenic |
| ACTGGATCAAGAGTAGGGAT+GGG | 0.644029 | 8.4:+22981101 | None:intergenic |
| CAGCAGACCAATTATCTCCA+CGG | 0.646524 | 8.4:+22981051 | None:intergenic |
| AGACACATTAATATCAGCAG+CGG | 0.659162 | 8.4:+22981001 | None:intergenic |
| AACAACAGCAGGAGATGACA+CGG | 0.660123 | 8.4:+22981124 | None:intergenic |
| GGAACACGAAGCAGATCAGG+CGG | 0.674892 | 8.4:-22981718 | MS.gene72335:CDS |
| AAGAAATCAGAAGCATGATG+TGG | 0.682976 | 8.4:-22981153 | MS.gene72335:CDS |
| ATTAATGTGTCTCTTCCTGG+AGG | 0.686956 | 8.4:-22980990 | MS.gene72335:CDS |
| TTCATGCCAAATGAAAGTGG+AGG | 0.721594 | 8.4:-22981742 | MS.gene72335:CDS |
| GCATTAACAGTGATGATGTG+GGG | 0.743775 | 8.4:+22982379 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAGTGATGATAAAATT+AGG | - | chr8.4:22981141-22981160 | MS.gene72335:CDS | 20.0% |
| !! | ATGAAGTGATGATAAAATTA+GGG | - | chr8.4:22981142-22981161 | MS.gene72335:CDS | 20.0% |
| !!! | TTGAATGAACCTTTTTAATT+TGG | - | chr8.4:22981871-22981890 | MS.gene72335:intron | 20.0% |
| ! | AGAAAATGAAATAACCTTCA+TGG | + | chr8.4:22981327-22981346 | None:intergenic | 25.0% |
| ! | ATAAACAGAATAAAAGTGAG+AGG | - | chr8.4:22981172-22981191 | MS.gene72335:CDS | 25.0% |
| ! | TAAACAGAATAAAAGTGAGA+GGG | - | chr8.4:22981173-22981192 | MS.gene72335:CDS | 25.0% |
| ! | TAAGAGTTATCTTTCTCAAA+TGG | + | chr8.4:22981978-22981997 | None:intergenic | 25.0% |
| ! | TATAGAAGAGAACTTTCATT+TGG | - | chr8.4:22981487-22981506 | MS.gene72335:intron | 25.0% |
| !! | TTTGAAATTCTGTCTTTATC+TGG | - | chr8.4:22981634-22981653 | MS.gene72335:CDS | 25.0% |
| !!! | TTTTTAATTCCCCAAATAAC+AGG | + | chr8.4:22981093-22981112 | None:intergenic | 25.0% |
| ACAAAATTGCTGACAATCAT+CGG | + | chr8.4:22981280-22981299 | None:intergenic | 30.0% | |
| AGGTATTTATTCTATCCGTA+AGG | - | chr8.4:22981791-22981810 | MS.gene72335:intron | 30.0% | |
| ATTTCAAACATGTATCTACC+AGG | - | chr8.4:22982181-22982200 | MS.gene72335:intron | 30.0% | |
| ATTTGCAAAATTCTCCCTTA+CGG | + | chr8.4:22981809-22981828 | None:intergenic | 30.0% | |
| GAAAGTTCTCTTCTATAAGA+TGG | + | chr8.4:22981484-22981503 | None:intergenic | 30.0% | |
| GAAGTTACTGATGATAGAAT+AGG | + | chr8.4:22982329-22982348 | None:intergenic | 30.0% | |
| GGTATTTATTCTATCCGTAA+GGG | - | chr8.4:22981792-22981811 | MS.gene72335:intron | 30.0% | |
| GTAGATCATTAAATGCATTG+TGG | + | chr8.4:22981515-22981534 | None:intergenic | 30.0% | |
| TATGCTGTAATCCTGTTATT+TGG | - | chr8.4:22981079-22981098 | MS.gene72335:CDS | 30.0% | |
| TGAATCACGCCAAATTAAAA+AGG | + | chr8.4:22981883-22981902 | None:intergenic | 30.0% | |
| TTATAGCAACATGAATAAGC+TGG | - | chr8.4:22982109-22982128 | MS.gene72335:intron | 30.0% | |
| TTTGTGTGTATGGTTATGTT+AGG | - | chr8.4:22981295-22981314 | MS.gene72335:intron | 30.0% | |
| ! | ATGCTGTAATCCTGTTATTT+GGG | - | chr8.4:22981080-22981099 | MS.gene72335:CDS | 30.0% |
| ! | GGTAGATACATGTTTGAAAT+TGG | + | chr8.4:22982181-22982200 | None:intergenic | 30.0% |
| ! | TACTTCTTTTCAGTGATAAC+TGG | - | chr8.4:22981242-22981261 | MS.gene72335:intron | 30.0% |
| !! | GTTATTTCATTTTCTCAGCA+AGG | - | chr8.4:22981332-22981351 | MS.gene72335:intron | 30.0% |
| AAATTTGAACCAACAGAGCA+AGG | + | chr8.4:22981000-22981019 | None:intergenic | 35.0% | |
| AATTTGAACCAACAGAGCAA+GGG | + | chr8.4:22980999-22981018 | None:intergenic | 35.0% | |
| ACATCATGCTTCTGATTTCT+TGG | + | chr8.4:22982251-22982270 | None:intergenic | 35.0% | |
| ACTGATGATAGAATAGGTAC+TGG | + | chr8.4:22982323-22982342 | None:intergenic | 35.0% | |
| AGACACATTAATATCAGCAG+CGG | + | chr8.4:22982405-22982424 | None:intergenic | 35.0% | |
| ATCCCACTATATGCTCAAAA+AGG | + | chr8.4:22981564-22981583 | None:intergenic | 35.0% | |
| ATGTTAGGATGTTACCATGA+AGG | - | chr8.4:22981310-22981329 | MS.gene72335:intron | 35.0% | |
| GAAATGGAGTTGTCATTGTA+AGG | + | chr8.4:22982060-22982079 | None:intergenic | 35.0% | |
| GAATGTTTGTTCGCTAGAAA+TGG | + | chr8.4:22982076-22982095 | None:intergenic | 35.0% | |
| GATAGAATAAATACCTGCAC+TGG | + | chr8.4:22981787-22981806 | None:intergenic | 35.0% | |
| GATATTAATGTGTCTCTTCC+TGG | - | chr8.4:22982410-22982429 | MS.gene72335:CDS | 35.0% | |
| GTATGCATTCTTTCAGCAAA+TGG | - | chr8.4:22981365-22981384 | MS.gene72335:intron | 35.0% | |
| TCTAGCGAACAAACATTCAA+TGG | - | chr8.4:22982078-22982097 | MS.gene72335:CDS | 35.0% | |
| ! | AAGAAATCAGAAGCATGATG+TGG | - | chr8.4:22982250-22982269 | MS.gene72335:intron | 35.0% |
| ! | AGCATTAACAGTGATGATGT+GGG | + | chr8.4:22981028-22981047 | None:intergenic | 35.0% |
| ! | TGCTGTAATCCTGTTATTTG+GGG | - | chr8.4:22981081-22981100 | MS.gene72335:CDS | 35.0% |
| ! | TGTCAGCAATTTTGTGTGTA+TGG | - | chr8.4:22981285-22981304 | MS.gene72335:intron | 35.0% |
| ! | TTAATTTGGCGTGATTCAAG+TGG | - | chr8.4:22981885-22981904 | MS.gene72335:intron | 35.0% |
| !! | TGCCTTTTTGAGCATATAGT+GGG | - | chr8.4:22981559-22981578 | MS.gene72335:intron | 35.0% |
| !! | TTTTGAGCATATAGTGGGAT+TGG | - | chr8.4:22981564-22981583 | MS.gene72335:intron | 35.0% |
| AACATGTATCTACCAGGTAG+TGG | - | chr8.4:22982187-22982206 | MS.gene72335:intron | 40.0% | |
| AGTGATCACACAGATATGAC+AGG | + | chr8.4:22981222-22981241 | None:intergenic | 40.0% | |
| ATTAATGTGTCTCTTCCTGG+AGG | - | chr8.4:22982413-22982432 | MS.gene72335:CDS | 40.0% | |
| CACATCATCACTGTTAATGC+TGG | - | chr8.4:22981027-22981046 | MS.gene72335:CDS | 40.0% | |
| GACACATTAATATCAGCAGC+GGG | + | chr8.4:22982404-22982423 | None:intergenic | 40.0% | |
| GTTTGAGTCTCTTAAGCATG+TGG | - | chr8.4:22981914-22981933 | MS.gene72335:intron | 40.0% | |
| TAAAACTACCAACCACTACC+TGG | + | chr8.4:22982202-22982221 | None:intergenic | 40.0% | |
| TCGTTCATGCCAAATGAAAG+TGG | - | chr8.4:22981658-22981677 | MS.gene72335:CDS | 40.0% | |
| TTCATGCCAAATGAAAGTGG+AGG | - | chr8.4:22981661-22981680 | MS.gene72335:CDS | 40.0% | |
| ! | CAGCATTAACAGTGATGATG+TGG | + | chr8.4:22981029-22981048 | None:intergenic | 40.0% |
| ! | GCATTAACAGTGATGATGTG+GGG | + | chr8.4:22981027-22981046 | None:intergenic | 40.0% |
| !! | ACTTATCTCGGTGTTTCTAC+AGG | - | chr8.4:22981606-22981625 | MS.gene72335:intron | 40.0% |
| !! | ATAGGTACTGGATCAAGAGT+AGG | + | chr8.4:22982311-22982330 | None:intergenic | 40.0% |
| !! | CTTATCTCGGTGTTTCTACA+GGG | - | chr8.4:22981607-22981626 | MS.gene72335:intron | 40.0% |
| !! | GTGCCTTTTTGAGCATATAG+TGG | - | chr8.4:22981558-22981577 | MS.gene72335:intron | 40.0% |
| !! | TAGGTACTGGATCAAGAGTA+GGG | + | chr8.4:22982310-22982329 | None:intergenic | 40.0% |
| !!! | GGTAGTGGTTGGTAGTTTTA+TGG | - | chr8.4:22982202-22982221 | MS.gene72335:intron | 40.0% |
| AACAACAGCAGGAGATGACA+CGG | + | chr8.4:22982282-22982301 | None:intergenic | 45.0% | |
| ACTGGATCAAGAGTAGGGAT+GGG | + | chr8.4:22982305-22982324 | None:intergenic | 45.0% | |
| AGACCAATTATCTCCACGGA+AGG | + | chr8.4:22982351-22982370 | None:intergenic | 45.0% | |
| ATGCCAAATGAAAGTGGAGG+AGG | - | chr8.4:22981664-22981683 | MS.gene72335:CDS | 45.0% | |
| CAGCAGACCAATTATCTCCA+CGG | + | chr8.4:22982355-22982374 | None:intergenic | 45.0% | |
| CATCACTGTTAATGCTGGAG+AGG | - | chr8.4:22981032-22981051 | MS.gene72335:CDS | 45.0% | |
| CTTCCTTCCGTGGAGATAAT+TGG | - | chr8.4:22982345-22982364 | MS.gene72335:intron | 45.0% | |
| GCACGCACAGTTACTTATCT+CGG | - | chr8.4:22981594-22981613 | MS.gene72335:intron | 45.0% | |
| GTCTCTTAAGCATGTGGTCA+TGG | - | chr8.4:22981920-22981939 | MS.gene72335:intron | 45.0% | |
| GTTCCTCCTCCACTTTCATT+TGG | + | chr8.4:22981670-22981689 | None:intergenic | 45.0% | |
| TACTGGATCAAGAGTAGGGA+TGG | + | chr8.4:22982306-22982325 | None:intergenic | 45.0% | |
| TCATCAGTAACTTCCTTCCG+TGG | - | chr8.4:22982335-22982354 | MS.gene72335:intron | 45.0% | |
| TTATCCTTTGCATCCGATGC+TGG | + | chr8.4:22982380-22982399 | None:intergenic | 45.0% | |
| TTCTTGGCTTCTGCTCATGT+TGG | + | chr8.4:22982235-22982254 | None:intergenic | 45.0% | |
| TTTGGCGTGATTCAAGTGGT+CGG | - | chr8.4:22981889-22981908 | MS.gene72335:intron | 45.0% | |
| ! | TGTATCTACCAGGTAGTGGT+TGG | - | chr8.4:22982191-22982210 | MS.gene72335:intron | 45.0% |
| !!! | GTGGTTGGTAGTTTTATGGC+AGG | - | chr8.4:22982206-22982225 | MS.gene72335:intron | 45.0% |
| AATGTGCCCCCAGAAGAATC+GGG | + | chr8.4:22981419-22981438 | None:intergenic | 50.0% | |
| CAATGTGCCCCCAGAAGAAT+CGG | + | chr8.4:22981420-22981439 | None:intergenic | 50.0% | |
| GAAAGAATGCATACCGCTCG+AGG | + | chr8.4:22981359-22981378 | None:intergenic | 50.0% | |
| GTGTCTTTGGCAAGTCCTGA+TGG | - | chr8.4:22981715-22981734 | MS.gene72335:CDS | 50.0% | |
| TTCGTCAGCCCGATTCTTCT+GGG | - | chr8.4:22981408-22981427 | MS.gene72335:intron | 50.0% | |
| ! | AGTCCTGATGGACGTGTTGT+TGG | - | chr8.4:22981727-22981746 | MS.gene72335:CDS | 50.0% |
| ! | TGGGGGCACATTGACATATG+AGG | - | chr8.4:22981427-22981446 | MS.gene72335:intron | 50.0% |
| !! | AGGAGTAGCTGGTTTGTTGG+TGG | - | chr8.4:22981753-22981772 | MS.gene72335:CDS | 50.0% |
| AGGCGGCATGAGTGTGTCTT+TGG | - | chr8.4:22981702-22981721 | MS.gene72335:CDS | 55.0% | |
| CTTCGTCAGCCCGATTCTTC+TGG | - | chr8.4:22981407-22981426 | MS.gene72335:intron | 55.0% | |
| GAATGGGTCCCTTGCTCTGT+TGG | - | chr8.4:22980988-22981007 | MS.gene72335:CDS | 55.0% | |
| GGAACACGAAGCAGATCAGG+CGG | - | chr8.4:22981685-22981704 | MS.gene72335:CDS | 55.0% | |
| GGAGGAACACGAAGCAGATC+AGG | - | chr8.4:22981682-22981701 | MS.gene72335:CDS | 55.0% | |
| GTAGGGATGGGAACAACAGC+AGG | + | chr8.4:22982293-22982312 | None:intergenic | 55.0% | |
| TCGTCAGCCCGATTCTTCTG+GGG | - | chr8.4:22981409-22981428 | MS.gene72335:intron | 55.0% | |
| TTCTCAGCAAGGACCTCGAG+CGG | - | chr8.4:22981343-22981362 | MS.gene72335:intron | 55.0% | |
| TTGGTCTGCTGTGCCAGCAT+CGG | - | chr8.4:22982364-22982383 | MS.gene72335:intron | 55.0% | |
| ! | CCTGATGGACGTGTTGTTGG+CGG | - | chr8.4:22981730-22981749 | MS.gene72335:CDS | 55.0% |
| ! | TGTGCCAGCATCGGATGCAA+AGG | - | chr8.4:22982373-22982392 | MS.gene72335:CDS | 55.0% |
| !! | CGGAGGAGTAGCTGGTTTGT+TGG | - | chr8.4:22981750-22981769 | MS.gene72335:CDS | 55.0% |
| CCGCCAACAACACGTCCATC+AGG | + | chr8.4:22981733-22981752 | None:intergenic | 60.0% | |
| CGTCAGCCCGATTCTTCTGG+GGG | - | chr8.4:22981410-22981429 | MS.gene72335:intron | 60.0% | |
| GGCGTGATTCAAGTGGTCGG+TGG | - | chr8.4:22981892-22981911 | MS.gene72335:intron | 60.0% | |
| GTTGTTGGCGGAGGAGTAGC+TGG | - | chr8.4:22981742-22981761 | MS.gene72335:CDS | 60.0% | |
| ! | GATGGACGTGTTGTTGGCGG+AGG | - | chr8.4:22981733-22981752 | MS.gene72335:CDS | 60.0% |
| GGTGGCTGCAAGTCCAGTGC+AGG | - | chr8.4:22981771-22981790 | MS.gene72335:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 22980986 | 22982439 | 22980986 | ID=MS.gene72335 |
| chr8.4 | mRNA | 22980986 | 22982439 | 22980986 | ID=MS.gene72335.t1;Parent=MS.gene72335 |
| chr8.4 | exon | 22982372 | 22982439 | 22982372 | ID=MS.gene72335.t1.exon1;Parent=MS.gene72335.t1 |
| chr8.4 | CDS | 22982372 | 22982439 | 22982372 | ID=cds.MS.gene72335.t1;Parent=MS.gene72335.t1 |
| chr8.4 | exon | 22981977 | 22982108 | 22981977 | ID=MS.gene72335.t1.exon2;Parent=MS.gene72335.t1 |
| chr8.4 | CDS | 22981977 | 22982108 | 22981977 | ID=cds.MS.gene72335.t1;Parent=MS.gene72335.t1 |
| chr8.4 | exon | 22981633 | 22981797 | 22981633 | ID=MS.gene72335.t1.exon3;Parent=MS.gene72335.t1 |
| chr8.4 | CDS | 22981633 | 22981797 | 22981633 | ID=cds.MS.gene72335.t1;Parent=MS.gene72335.t1 |
| chr8.4 | exon | 22980986 | 22981222 | 22980986 | ID=MS.gene72335.t1.exon4;Parent=MS.gene72335.t1 |
| chr8.4 | CDS | 22980986 | 22981222 | 22980986 | ID=cds.MS.gene72335.t1;Parent=MS.gene72335.t1 |
| Gene Sequence |
| Protein sequence |
