Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050060.t1 | XP_003615204.1 | 99.3 | 269 | 2 | 0 | 1 | 269 | 95 | 363 | 1.30E-139 | 505.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050060.t1 | Q9FZ96 | 60.4 | 268 | 100 | 3 | 1 | 263 | 81 | 347 | 1.5e-83 | 310.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050060.t1 | G7KBC7 | 99.3 | 269 | 2 | 0 | 1 | 269 | 95 | 363 | 9.2e-140 | 505.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050060 | MS.gene050133 | -0.806247 | 9.03E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene050406 | 0.80345 | 3.47E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene050426 | -0.813688 | 2.26E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene051525 | 0.806327 | 8.68E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene052077 | 0.804386 | 2.22E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene052134 | 0.811949 | 5.42E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene052135 | 0.807806 | 4.22E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene052136 | 0.8029 | 4.50E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene052188 | 0.821044 | 4.98E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene052340 | 0.835477 | 1.64E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene052469 | 0.865809 | 4.51E-65 | -1.69E-46 |
| MS.gene050060 | MS.gene052758 | 0.811639 | 6.33E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene053330 | 0.800197 | 1.61E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene054349 | 0.832713 | 8.08E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene055539 | 0.837395 | 5.33E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene05553 | 0.83 | 3.76E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene05556 | 0.849558 | 2.99E-60 | -1.69E-46 |
| MS.gene050060 | MS.gene055744 | 0.800584 | 1.35E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene056233 | 0.861567 | 9.37E-64 | -1.69E-46 |
| MS.gene050060 | MS.gene056659 | 0.803938 | 2.75E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene057396 | 0.837431 | 5.22E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene058444 | 0.802132 | 6.49E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene058928 | 0.808749 | 2.66E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene059285 | 0.810734 | 9.95E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene059717 | 0.851194 | 1.04E-60 | -1.69E-46 |
| MS.gene050060 | MS.gene060247 | 0.835185 | 1.94E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene060717 | 0.830683 | 2.56E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene061159 | 0.813421 | 2.58E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene06260 | 0.851295 | 9.74E-61 | -1.69E-46 |
| MS.gene050060 | MS.gene063196 | 0.803841 | 2.88E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene063348 | 0.800509 | 1.39E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene063368 | 0.810182 | 1.31E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene063906 | 0.824005 | 1.02E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene065350 | -0.818436 | 1.96E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene065475 | 0.81143 | 7.03E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene065846 | 0.844894 | 5.70E-59 | -1.69E-46 |
| MS.gene050060 | MS.gene067925 | 0.854721 | 1.02E-61 | -1.69E-46 |
| MS.gene050060 | MS.gene068064 | 0.800938 | 1.14E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene068946 | 0.854964 | 8.67E-62 | -1.69E-46 |
| MS.gene050060 | MS.gene069266 | 0.811209 | 7.85E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene069717 | 0.80578 | 1.13E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene070266 | 0.821287 | 4.38E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene070790 | 0.83572 | 1.42E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene070968 | 0.807542 | 4.80E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene071294 | 0.807776 | 4.29E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene071677 | 0.800754 | 1.24E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene071722 | 0.823671 | 1.22E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene072070 | 0.833901 | 4.09E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene072659 | -0.810673 | 1.03E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene073295 | 0.823561 | 1.30E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene073427 | 0.877637 | 5.36E-69 | -1.69E-46 |
| MS.gene050060 | MS.gene073446 | 0.824142 | 9.47E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene073486 | 0.80383 | 2.89E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene073579 | 0.800303 | 1.54E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene073723 | 0.809947 | 1.47E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene073894 | 0.808203 | 3.48E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene074393 | -0.80107 | 1.07E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene07699 | 0.804442 | 2.16E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene08083 | 0.872693 | 2.61E-67 | -1.69E-46 |
| MS.gene050060 | MS.gene08317 | 0.807101 | 5.96E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene08779 | 0.839412 | 1.61E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene08872 | -0.813136 | 2.98E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene08906 | 0.839534 | 1.50E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene08908 | 0.842708 | 2.19E-58 | -1.69E-46 |
| MS.gene050060 | MS.gene09137 | 0.819454 | 1.15E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene09310 | 0.83509 | 2.05E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene09558 | 0.816085 | 6.63E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene09570 | 0.821186 | 4.61E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene09725 | 0.819762 | 9.79E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene09727 | 0.809741 | 1.63E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene09765 | 0.822839 | 1.91E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene09777 | 0.841164 | 5.61E-58 | -1.69E-46 |
| MS.gene050060 | MS.gene09923 | 0.82163 | 3.65E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene09929 | 0.812955 | 3.27E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene20096 | 0.844367 | 7.90E-59 | -1.69E-46 |
| MS.gene050060 | MS.gene20340 | 0.816189 | 6.29E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene20556 | 0.832826 | 7.57E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene20812 | 0.85925 | 4.71E-63 | -1.69E-46 |
| MS.gene050060 | MS.gene21013 | 0.826754 | 2.28E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene21508 | 0.806211 | 9.18E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene21534 | 0.810794 | 9.65E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene21625 | 0.80454 | 2.06E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene22386 | 0.838458 | 2.84E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene22504 | 0.81315 | 2.96E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene22558 | 0.817609 | 3.02E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene22896 | 0.800176 | 1.63E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene23771 | 0.807445 | 5.04E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene24034 | 0.802989 | 4.32E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene25929 | 0.839822 | 1.26E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene26111 | 0.817137 | 3.85E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene26624 | -0.831417 | 1.69E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene26705 | -0.841767 | 3.89E-58 | -1.69E-46 |
| MS.gene050060 | MS.gene27363 | 0.823189 | 1.58E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene28025 | 0.803759 | 2.99E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene28167 | 0.807256 | 5.52E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene28693 | 0.835015 | 2.15E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene28694 | 0.817671 | 2.92E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene28853 | -0.808458 | 3.07E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene28984 | 0.821139 | 4.73E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene28999 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene29002 | 0.807227 | 5.60E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene29467 | 0.826314 | 2.90E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene29790 | 0.82298 | 1.77E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene29791 | 0.814899 | 1.22E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene29968 | 0.823637 | 1.24E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene30519 | -0.804549 | 2.05E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene30520 | -0.809303 | 2.02E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene31266 | 0.810791 | 9.67E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene31671 | 0.845719 | 3.41E-59 | -1.69E-46 |
| MS.gene050060 | MS.gene32713 | 0.827578 | 1.45E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene33072 | 0.804215 | 2.40E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene33198 | 0.810143 | 1.33E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene34187 | 0.826543 | 2.56E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene34188 | 0.815971 | 7.03E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene34190 | 0.830605 | 2.67E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene34191 | 0.840258 | 9.69E-58 | -1.69E-46 |
| MS.gene050060 | MS.gene34384 | 0.844082 | 9.42E-59 | -1.69E-46 |
| MS.gene050060 | MS.gene34394 | 0.808487 | 3.02E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene34800 | 0.805967 | 1.03E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene35020 | 0.872934 | 2.17E-67 | -1.69E-46 |
| MS.gene050060 | MS.gene35485 | 0.82153 | 3.85E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene35560 | 0.81924 | 1.29E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene35984 | 0.816532 | 5.27E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene36023 | 0.82145 | 4.01E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene36105 | 0.8202 | 7.78E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene36260 | 0.869335 | 3.34E-66 | -1.69E-46 |
| MS.gene050060 | MS.gene36507 | 0.824742 | 6.84E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene36775 | 0.8036 | 3.23E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene36952 | 0.809252 | 2.07E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene37681 | 0.801603 | 8.33E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene37698 | 0.813451 | 2.54E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene38232 | 0.809373 | 1.95E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene39361 | 0.830208 | 3.34E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene39366 | 0.849955 | 2.32E-60 | -1.69E-46 |
| MS.gene050060 | MS.gene39679 | 0.823928 | 1.06E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene40169 | 0.822814 | 1.94E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene41565 | 0.805403 | 1.36E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene41649 | 0.838321 | 3.08E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene41713 | 0.846444 | 2.16E-59 | -1.69E-46 |
| MS.gene050060 | MS.gene42746 | 0.806432 | 8.25E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene42747 | 0.822347 | 2.49E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene42798 | 0.807163 | 5.78E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene43039 | 0.815347 | 9.69E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene43149 | 0.817235 | 3.66E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene43151 | 0.803638 | 3.17E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene43782 | 0.82788 | 1.22E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene44654 | 0.809652 | 1.70E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene45002 | 0.807382 | 5.20E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene45003 | 0.8015 | 8.75E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene45727 | 0.825571 | 4.36E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene46956 | 0.828689 | 7.82E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene47714 | 0.841716 | 4.01E-58 | -1.69E-46 |
| MS.gene050060 | MS.gene48030 | 0.833918 | 4.05E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene48044 | 0.822114 | 2.82E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene48370 | 0.819159 | 1.34E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene48573 | 0.826561 | 2.54E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene49436 | 0.814403 | 1.57E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene49504 | 0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene50035 | 0.825391 | 4.81E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene50226 | 0.821691 | 3.53E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene51034 | 0.882236 | 1.23E-70 | -1.69E-46 |
| MS.gene050060 | MS.gene51540 | 0.808004 | 3.83E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene51552 | 0.805369 | 1.38E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene52786 | 0.823825 | 1.12E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene53143 | 0.815478 | 9.06E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene54201 | 0.806425 | 8.28E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene56006 | 0.812891 | 3.37E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene56100 | 0.831359 | 1.75E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene56177 | 0.864039 | 1.62E-64 | -1.69E-46 |
| MS.gene050060 | MS.gene56211 | 0.812802 | 3.53E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene56412 | 0.832406 | 9.63E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene56490 | 0.828096 | 1.09E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene56713 | 0.809736 | 1.63E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene57232 | 0.839899 | 1.20E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene57287 | 0.805308 | 1.42E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene57340 | 0.802861 | 4.59E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene58344 | 0.820293 | 7.41E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene58345 | 0.822429 | 2.38E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene58570 | 0.836645 | 8.29E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene58652 | 0.853764 | 1.93E-61 | -1.69E-46 |
| MS.gene050060 | MS.gene58671 | 0.842416 | 2.62E-58 | -1.69E-46 |
| MS.gene050060 | MS.gene58789 | 0.849229 | 3.70E-60 | -1.69E-46 |
| MS.gene050060 | MS.gene59760 | 0.832546 | 8.89E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene60286 | 0.813592 | 2.37E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene60748 | 0.827568 | 1.46E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene61373 | 0.837959 | 3.82E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene61544 | 0.863057 | 3.27E-64 | -1.69E-46 |
| MS.gene050060 | MS.gene61701 | 0.809645 | 1.71E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene62091 | 0.843966 | 1.01E-58 | -1.69E-46 |
| MS.gene050060 | MS.gene63882 | 0.824697 | 7.02E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene63955 | 0.803384 | 3.58E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene64133 | 0.888946 | 3.76E-73 | -1.69E-46 |
| MS.gene050060 | MS.gene64466 | 0.828673 | 7.89E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene64729 | 0.809384 | 1.94E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene64994 | 0.807306 | 5.39E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene66702 | 0.831169 | 1.94E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene66922 | 0.802271 | 6.07E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene68525 | 0.843888 | 1.06E-58 | -1.69E-46 |
| MS.gene050060 | MS.gene68526 | 0.824095 | 9.72E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene68765 | 0.80364 | 3.17E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene69110 | 0.849764 | 2.62E-60 | -1.69E-46 |
| MS.gene050060 | MS.gene70216 | 0.804117 | 2.52E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene70368 | 0.850677 | 1.46E-60 | -1.69E-46 |
| MS.gene050060 | MS.gene71752 | 0.816669 | 4.91E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene71924 | -0.872279 | 3.59E-67 | -1.69E-46 |
| MS.gene050060 | MS.gene72053 | 0.80078 | 1.23E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene72054 | 0.81089 | 9.20E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene72335 | -0.802507 | 5.43E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene73446 | 0.863313 | 2.72E-64 | -1.69E-46 |
| MS.gene050060 | MS.gene73515 | 0.805946 | 1.04E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene73811 | 0.839961 | 1.16E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene74558 | 0.800128 | 1.67E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene74594 | 0.832372 | 9.81E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene75493 | 0.829127 | 6.13E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene75660 | 0.808383 | 3.18E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene76038 | 0.818865 | 1.57E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene77877 | 0.820092 | 8.23E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene77925 | 0.811813 | 5.80E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene78129 | 0.823798 | 1.14E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene78431 | 0.812977 | 3.23E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene78531 | 0.800442 | 1.44E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene78643 | 0.813079 | 3.07E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene78667 | 0.815426 | 9.30E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene79020 | 0.81744 | 3.29E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene79479 | 0.825981 | 3.48E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene79482 | 0.810664 | 1.03E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene79744 | 0.800722 | 1.26E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene79903 | 0.819321 | 1.23E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene79962 | -0.832813 | 7.63E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene80157 | 0.819377 | 1.20E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene80172 | 0.809838 | 1.55E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene80547 | 0.817417 | 3.33E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene81254 | 0.823832 | 1.12E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene81388 | 0.808497 | 3.01E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene82533 | 0.813535 | 2.44E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene82939 | 0.851165 | 1.06E-60 | -1.69E-46 |
| MS.gene050060 | MS.gene83447 | 0.803987 | 2.68E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene84159 | 0.807931 | 3.97E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene84200 | 0.814437 | 1.54E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene84544 | 0.818521 | 1.88E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene85860 | 0.833312 | 5.73E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene86095 | 0.828778 | 7.44E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene86339 | 0.856821 | 2.48E-62 | -1.69E-46 |
| MS.gene050060 | MS.gene88498 | 0.865228 | 6.88E-65 | -1.69E-46 |
| MS.gene050060 | MS.gene88768 | 0.827983 | 1.16E-54 | -1.69E-46 |
| MS.gene050060 | MS.gene88860 | 0.836348 | 9.86E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene88978 | 0.801475 | 8.85E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene89074 | 0.860221 | 2.40E-63 | -1.69E-46 |
| MS.gene050060 | MS.gene89225 | 0.817628 | 2.99E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene89652 | 0.802675 | 5.01E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene89978 | 0.803833 | 2.89E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene89994 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene90178 | 0.853215 | 2.77E-61 | -1.69E-46 |
| MS.gene050060 | MS.gene91342 | -0.860588 | 1.86E-63 | -1.69E-46 |
| MS.gene050060 | MS.gene91581 | 0.805331 | 1.41E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene92106 | 0.806026 | 1.00E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene92668 | 0.820826 | 5.59E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene93402 | -0.841545 | 4.45E-58 | -1.69E-46 |
| MS.gene050060 | MS.gene94558 | 0.81022 | 1.28E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene96333 | 0.831122 | 2.00E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene98291 | 0.807534 | 4.82E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene98609 | 0.863623 | 2.18E-64 | -1.69E-46 |
| MS.gene050060 | MS.gene99466 | 0.800918 | 1.15E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene99544 | -0.802587 | 5.23E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene99877 | 0.825882 | 3.68E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050060.t1 | MTR_5g065080 | 99.257 | 269 | 2 | 0 | 1 | 269 | 95 | 363 | 0.0 | 538 |
| MS.gene050060.t1 | MTR_3g099740 | 67.647 | 272 | 84 | 2 | 1 | 269 | 98 | 368 | 4.62e-130 | 373 |
| MS.gene050060.t1 | MTR_3g099750 | 66.176 | 272 | 88 | 2 | 1 | 269 | 97 | 367 | 2.67e-125 | 361 |
| MS.gene050060.t1 | MTR_2g437590 | 37.918 | 269 | 154 | 4 | 3 | 262 | 139 | 403 | 5.81e-54 | 180 |
| MS.gene050060.t1 | MTR_3g058660 | 37.308 | 260 | 161 | 2 | 12 | 270 | 98 | 356 | 2.19e-50 | 169 |
| MS.gene050060.t1 | MTR_8g024620 | 36.800 | 250 | 157 | 1 | 5 | 254 | 109 | 357 | 6.19e-49 | 166 |
| MS.gene050060.t1 | MTR_8g024620 | 36.800 | 250 | 157 | 1 | 5 | 254 | 120 | 368 | 7.35e-49 | 166 |
| MS.gene050060.t1 | MTR_8g024620 | 36.800 | 250 | 157 | 1 | 5 | 254 | 121 | 369 | 7.53e-49 | 166 |
| MS.gene050060.t1 | MTR_4g098900 | 34.921 | 252 | 147 | 2 | 13 | 264 | 121 | 355 | 8.61e-48 | 164 |
| MS.gene050060.t1 | MTR_2g015470 | 34.231 | 260 | 170 | 1 | 1 | 260 | 112 | 370 | 5.63e-46 | 158 |
| MS.gene050060.t1 | MTR_2g437580 | 36.502 | 263 | 158 | 4 | 2 | 259 | 119 | 377 | 3.98e-44 | 154 |
| MS.gene050060.t1 | MTR_7g080750 | 33.735 | 249 | 151 | 2 | 11 | 259 | 106 | 340 | 2.13e-38 | 138 |
| MS.gene050060.t1 | MTR_6g082540 | 32.653 | 147 | 99 | 0 | 102 | 248 | 5 | 151 | 1.75e-23 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050060.t1 | AT2G33750 | 63.258 | 264 | 96 | 1 | 1 | 264 | 77 | 339 | 1.08e-118 | 343 |
| MS.gene050060.t1 | AT2G33750 | 60.727 | 275 | 96 | 2 | 1 | 264 | 77 | 350 | 2.57e-115 | 335 |
| MS.gene050060.t1 | AT1G28230 | 60.448 | 268 | 100 | 3 | 1 | 263 | 81 | 347 | 5.75e-112 | 327 |
| MS.gene050060.t1 | AT1G28220 | 57.198 | 257 | 109 | 1 | 1 | 257 | 75 | 330 | 2.94e-107 | 315 |
| MS.gene050060.t1 | AT4G18220 | 39.062 | 256 | 152 | 3 | 11 | 265 | 122 | 374 | 8.37e-53 | 176 |
| MS.gene050060.t1 | AT4G18210 | 38.492 | 252 | 145 | 3 | 19 | 265 | 130 | 376 | 1.80e-49 | 168 |
| MS.gene050060.t1 | AT4G18205 | 37.121 | 264 | 161 | 2 | 2 | 261 | 106 | 368 | 4.04e-45 | 156 |
| MS.gene050060.t1 | AT1G44750 | 34.661 | 251 | 163 | 1 | 11 | 261 | 44 | 293 | 4.88e-44 | 151 |
| MS.gene050060.t1 | AT1G44750 | 34.661 | 251 | 163 | 1 | 11 | 261 | 44 | 293 | 4.88e-44 | 151 |
| MS.gene050060.t1 | AT1G44750 | 34.661 | 251 | 163 | 1 | 11 | 261 | 44 | 293 | 4.88e-44 | 151 |
| MS.gene050060.t1 | AT1G44750 | 34.661 | 251 | 163 | 1 | 11 | 261 | 44 | 293 | 4.88e-44 | 151 |
| MS.gene050060.t1 | AT1G44750 | 34.661 | 251 | 163 | 1 | 11 | 261 | 44 | 293 | 4.88e-44 | 151 |
| MS.gene050060.t1 | AT1G44750 | 34.661 | 251 | 163 | 1 | 11 | 261 | 108 | 357 | 2.41e-43 | 151 |
| MS.gene050060.t1 | AT1G44750 | 34.661 | 251 | 163 | 1 | 11 | 261 | 108 | 357 | 2.41e-43 | 151 |
| MS.gene050060.t1 | AT1G44750 | 34.661 | 251 | 163 | 1 | 11 | 261 | 120 | 369 | 3.42e-43 | 151 |
| MS.gene050060.t1 | AT4G18197 | 34.815 | 270 | 171 | 2 | 2 | 267 | 109 | 377 | 2.08e-40 | 144 |
| MS.gene050060.t1 | AT4G18195 | 35.743 | 249 | 159 | 1 | 11 | 259 | 125 | 372 | 4.90e-38 | 138 |
| MS.gene050060.t1 | AT4G18190 | 34.630 | 257 | 164 | 2 | 12 | 265 | 116 | 371 | 1.43e-35 | 131 |
| MS.gene050060.t1 | AT1G30840 | 37.603 | 242 | 145 | 4 | 7 | 246 | 99 | 336 | 3.53e-35 | 130 |
| MS.gene050060.t1 | AT1G30840 | 37.603 | 242 | 145 | 4 | 7 | 246 | 99 | 336 | 3.53e-35 | 130 |
| MS.gene050060.t1 | AT2G24220 | 37.344 | 241 | 150 | 1 | 1 | 241 | 101 | 340 | 9.89e-35 | 128 |
| MS.gene050060.t1 | AT2G24220 | 37.975 | 237 | 146 | 1 | 5 | 241 | 123 | 358 | 1.20e-34 | 128 |
| MS.gene050060.t1 | AT4G08700 | 29.084 | 251 | 176 | 2 | 12 | 261 | 110 | 359 | 3.70e-32 | 121 |
| MS.gene050060.t1 | AT5G41160 | 28.685 | 251 | 177 | 2 | 12 | 261 | 113 | 362 | 8.36e-30 | 115 |
| MS.gene050060.t1 | AT1G19770 | 28.049 | 246 | 164 | 3 | 12 | 246 | 140 | 383 | 1.58e-23 | 99.0 |
| MS.gene050060.t1 | AT1G57943 | 28.159 | 277 | 180 | 5 | 5 | 269 | 127 | 396 | 1.59e-18 | 84.7 |
| MS.gene050060.t1 | AT1G57943 | 28.159 | 277 | 180 | 5 | 5 | 269 | 126 | 395 | 1.81e-18 | 84.7 |
| MS.gene050060.t1 | AT1G47603 | 28.736 | 261 | 167 | 8 | 5 | 254 | 129 | 381 | 4.04e-16 | 77.8 |
| MS.gene050060.t1 | AT1G57990 | 25.092 | 271 | 181 | 5 | 12 | 269 | 127 | 388 | 1.98e-15 | 75.9 |
| MS.gene050060.t1 | AT1G57980 | 26.937 | 271 | 176 | 5 | 12 | 269 | 131 | 392 | 2.63e-15 | 75.5 |
| MS.gene050060.t1 | AT1G09860 | 28.309 | 272 | 164 | 9 | 12 | 261 | 120 | 382 | 7.88e-13 | 68.2 |
| MS.gene050060.t1 | AT1G75470 | 21.610 | 236 | 171 | 4 | 28 | 251 | 144 | 377 | 1.35e-12 | 67.4 |
Find 46 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTTGGTGCTCTCACTTT+GGG | 0.109096 | 5.4:+50622578 | MS.gene050060:CDS |
| TGTGCCTCTTCATTGCTATC+TGG | 0.276545 | 5.4:+50622471 | MS.gene050060:CDS |
| GACCCTTGGGAGTGTTGTTT+TGG | 0.297124 | 5.4:+50621191 | MS.gene050060:CDS |
| AACAGCTAAGATTTCAGTTA+TGG | 0.309424 | 5.4:-50622517 | None:intergenic |
| TTGGCTTCTGCTGCTTTGTA+TGG | 0.317318 | 5.4:+50621288 | MS.gene050060:CDS |
| TTGCTTTGGTGCTCTCACTT+TGG | 0.319968 | 5.4:+50622577 | MS.gene050060:CDS |
| TATTACTTATTCTCTTGTTA+TGG | 0.358957 | 5.4:+50621359 | MS.gene050060:CDS |
| TCTACTAAGGATTATGTGAT+TGG | 0.363277 | 5.4:+50621252 | MS.gene050060:CDS |
| AGCAGAGAAAGGGGTTGCTT+TGG | 0.380450 | 5.4:+50622563 | MS.gene050060:CDS |
| ACAGCTAAGATTTCAGTTAT+GGG | 0.401537 | 5.4:-50622516 | None:intergenic |
| AGAAATTTCAAGCAGAGAAA+GGG | 0.404504 | 5.4:+50622553 | MS.gene050060:CDS |
| GAGAAATTTCAAGCAGAGAA+AGG | 0.424086 | 5.4:+50622552 | MS.gene050060:CDS |
| TTGAAATCCCTTGCTTCCCT+TGG | 0.436924 | 5.4:-50622360 | None:intergenic |
| GAAGCAAGGGATTTCAAGCT+TGG | 0.447995 | 5.4:+50622366 | MS.gene050060:CDS |
| AAGCAAGGGATTTCAAGCTT+GGG | 0.461079 | 5.4:+50622367 | MS.gene050060:CDS |
| ACTTGTTGGTGAGTCTACTA+AGG | 0.477683 | 5.4:+50621239 | MS.gene050060:CDS |
| GTGATTGAATGAAGACTTTG+AGG | 0.480812 | 5.4:-50622669 | None:intergenic |
| GATGGTGGAGATAGACTTGT+TGG | 0.502081 | 5.4:+50621225 | MS.gene050060:CDS |
| TTTATCGCCTCGGCAGTCAT+CGG | 0.503562 | 5.4:+50621000 | MS.gene050060:CDS |
| ACCACCTTTGTTTATCGCCT+CGG | 0.508003 | 5.4:+50620990 | MS.gene050060:CDS |
| CGATTTCGTAGGTGATTCCA+AGG | 0.517543 | 5.4:+50622343 | MS.gene050060:intron |
| GTAGAGGTAGTCGTCTAAAC+CGG | 0.524198 | 5.4:-50621031 | None:intergenic |
| TTATAAACCAACTCCAACAA+CGG | 0.529943 | 5.4:-50621321 | None:intergenic |
| GAAATTTCAAGCAGAGAAAG+GGG | 0.546511 | 5.4:+50622554 | MS.gene050060:CDS |
| GCTTTGGTGCTCTCACTTTG+GGG | 0.547915 | 5.4:+50622579 | MS.gene050060:CDS |
| CGGTAGACGCTTTATGCCGC+AGG | 0.567407 | 5.4:-50621055 | None:intergenic |
| AGGTGATTCCAAGGGAAGCA+AGG | 0.567865 | 5.4:+50622352 | MS.gene050060:intron |
| CTGCGGCATAAAGCGTCTAC+CGG | 0.571271 | 5.4:+50621056 | MS.gene050060:CDS |
| AGCAAGGGATTTCAAGCTTG+GGG | 0.584822 | 5.4:+50622368 | MS.gene050060:CDS |
| GCAGTCATCGGAGTTCTCAC+CGG | 0.586933 | 5.4:+50621012 | MS.gene050060:CDS |
| AGTACTATGTTGTGCTAGTG+TGG | 0.588131 | 5.4:+50622397 | MS.gene050060:CDS |
| GATACCAGATAGCAATGAAG+AGG | 0.606353 | 5.4:-50622475 | None:intergenic |
| GTGCCAAAACAACACTCCCA+AGG | 0.608152 | 5.4:-50621194 | None:intergenic |
| TGCCAAAACAACACTCCCAA+GGG | 0.608894 | 5.4:-50621193 | None:intergenic |
| GGTGATTCCAAGGGAAGCAA+GGG | 0.622275 | 5.4:+50622353 | MS.gene050060:intron |
| CGCGGTGAAAGCTAAGTGTG+AGG | 0.632940 | 5.4:-50621103 | None:intergenic |
| GAGAACTCCGATGACTGCCG+AGG | 0.638422 | 5.4:-50621007 | None:intergenic |
| GCTTTATGCCGCAGGCGTAG+AGG | 0.652914 | 5.4:-50621047 | None:intergenic |
| TTGGCACTGAATTCTGATGG+TGG | 0.661099 | 5.4:+50621210 | MS.gene050060:CDS |
| ACTGCCGAGGCGATAAACAA+AGG | 0.663196 | 5.4:-50620994 | None:intergenic |
| GACGACTACCTCTACGCCTG+CGG | 0.669034 | 5.4:+50621039 | MS.gene050060:CDS |
| ATTAACGAAGAAGTTGACAC+CGG | 0.698512 | 5.4:-50621075 | None:intergenic |
| GCCGAGGCGATAAACAAAGG+TGG | 0.705785 | 5.4:-50620991 | None:intergenic |
| GATTTCGTAGGTGATTCCAA+GGG | 0.713597 | 5.4:+50622344 | MS.gene050060:intron |
| TAGTGTGGAGTGCTATAATG+TGG | 0.749239 | 5.4:+50622412 | MS.gene050060:CDS |
| CTCACACTTAGCTTTCACCG+CGG | 0.755684 | 5.4:+50621104 | MS.gene050060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATGAAAAATAGAGAAA+TGG | + | chr5.4:50622641-50622660 | MS.gene050060:CDS | 15.0% |
| !! | AAATGTATAGAATTAGAATA+AGG | + | chr5.4:50621779-50621798 | MS.gene050060:intron | 15.0% |
| !! | ATCAATAATTCAATATCAAT+GGG | - | chr5.4:50621853-50621872 | None:intergenic | 15.0% |
| !! | CTAAGAATAATTATTACATT+TGG | + | chr5.4:50621909-50621928 | MS.gene050060:intron | 15.0% |
| !! | GTTAAAAGTTTAAATCAAAA+AGG | - | chr5.4:50621575-50621594 | None:intergenic | 15.0% |
| !! | TATTACTAATGTAAAACATA+AGG | - | chr5.4:50622312-50622331 | None:intergenic | 15.0% |
| !!! | AAAAGTTTCTTTTAATTGTA+AGG | + | chr5.4:50622028-50622047 | MS.gene050060:intron | 15.0% |
| !!! | AAAATTTAAAACCTAAATTG+TGG | - | chr5.4:50621986-50622005 | None:intergenic | 15.0% |
| !!! | AAATTTAAAACCTAAATTGT+GGG | - | chr5.4:50621985-50622004 | None:intergenic | 15.0% |
| !! | AATAAACACAATGTAAAACA+TGG | - | chr5.4:50622166-50622185 | None:intergenic | 20.0% |
| !! | AATCAAAAAGGAAAAAAACA+TGG | - | chr5.4:50621563-50621582 | None:intergenic | 20.0% |
| !! | ATAACAGAATTAGAATATTG+TGG | + | chr5.4:50621748-50621767 | MS.gene050060:intron | 20.0% |
| !! | CATCAATAATTCAATATCAA+TGG | - | chr5.4:50621854-50621873 | None:intergenic | 20.0% |
| !! | TATTACTTATTCTCTTGTTA+TGG | + | chr5.4:50621359-50621378 | MS.gene050060:CDS | 20.0% |
| !!! | AGATGAGTTTATATTTTATG+CGG | - | chr5.4:50622124-50622143 | None:intergenic | 20.0% |
| ! | AATCCTTACGTAAATTAAGT+TGG | - | chr5.4:50621949-50621968 | None:intergenic | 25.0% |
| ! | ATATGTATAGTAAGTTGTTG+TGG | - | chr5.4:50622259-50622278 | None:intergenic | 25.0% |
| ! | ATTCCAACTTAATTTACGTA+AGG | + | chr5.4:50621943-50621962 | MS.gene050060:intron | 25.0% |
| ! | TAAGAATAACACACATTCTA+AGG | - | chr5.4:50621691-50621710 | None:intergenic | 25.0% |
| ! | TTATTCTTAGATTCAATACG+TGG | - | chr5.4:50621899-50621918 | None:intergenic | 25.0% |
| !! | GATCATAGACAATGATTTTA+AGG | + | chr5.4:50621434-50621453 | MS.gene050060:CDS | 25.0% |
| !!! | GATTGGTTTTGTTATGATAT+TGG | + | chr5.4:50621269-50621288 | MS.gene050060:CDS | 25.0% |
| !!! | GTTTCTTTTAATTGTAAGGT+AGG | + | chr5.4:50622032-50622051 | MS.gene050060:intron | 25.0% |
| !!! | TTTTGAGAAACAAAAAGAGA+GGG | - | chr5.4:50621818-50621837 | None:intergenic | 25.0% |
| AAAACACGTGTACATTTGTT+TGG | - | chr5.4:50621651-50621670 | None:intergenic | 30.0% | |
| AACAGCTAAGATTTCAGTTA+TGG | - | chr5.4:50622520-50622539 | None:intergenic | 30.0% | |
| AATTGTGAGTGTACAAAGTA+TGG | - | chr5.4:50621500-50621519 | None:intergenic | 30.0% | |
| ACAATGTAAAACATGGAAGT+CGG | - | chr5.4:50622159-50622178 | None:intergenic | 30.0% | |
| ACAGCTAAGATTTCAGTTAT+GGG | - | chr5.4:50622519-50622538 | None:intergenic | 30.0% | |
| AGAAATTTCAAGCAGAGAAA+GGG | + | chr5.4:50622553-50622572 | MS.gene050060:CDS | 30.0% | |
| TCTACTAAGGATTATGTGAT+TGG | + | chr5.4:50621252-50621271 | MS.gene050060:CDS | 30.0% | |
| TTATAAACCAACTCCAACAA+CGG | - | chr5.4:50621324-50621343 | None:intergenic | 30.0% | |
| TTTGAGAAACAAAAAGAGAG+GGG | - | chr5.4:50621817-50621836 | None:intergenic | 30.0% | |
| ! | ATGTGGCAATTTTTCTTCTT+AGG | + | chr5.4:50622429-50622448 | MS.gene050060:CDS | 30.0% |
| !!! | GTTTTGAGAAACAAAAAGAG+AGG | - | chr5.4:50621819-50621838 | None:intergenic | 30.0% |
| ATTAACGAAGAAGTTGACAC+CGG | - | chr5.4:50621078-50621097 | None:intergenic | 35.0% | |
| CAATCTTAGTCCCACAATTT+AGG | + | chr5.4:50621972-50621991 | MS.gene050060:intron | 35.0% | |
| CTAAATTGTGGGACTAAGAT+TGG | - | chr5.4:50621974-50621993 | None:intergenic | 35.0% | |
| GAAATTTCAAGCAGAGAAAG+GGG | + | chr5.4:50622554-50622573 | MS.gene050060:CDS | 35.0% | |
| GAGAAATTTCAAGCAGAGAA+AGG | + | chr5.4:50622552-50622571 | MS.gene050060:CDS | 35.0% | |
| GTACATTTGTTTGGTTACTG+AGG | - | chr5.4:50621642-50621661 | None:intergenic | 35.0% | |
| GTGATTGAATGAAGACTTTG+AGG | - | chr5.4:50622672-50622691 | None:intergenic | 35.0% | |
| TTGAGAAACAAAAAGAGAGG+GGG | - | chr5.4:50621816-50621835 | None:intergenic | 35.0% | |
| ! | AATGAGTATTGCGATTTCGT+AGG | + | chr5.4:50622332-50622351 | MS.gene050060:intron | 35.0% |
| ! | TTTTTCTTCTTAGGAGCGAT+TGG | + | chr5.4:50622438-50622457 | MS.gene050060:CDS | 35.0% |
| !! | CTATTGTTTTGTTGACCCTT+GGG | + | chr5.4:50621178-50621197 | MS.gene050060:CDS | 35.0% |
| !! | TCTATTGTTTTGTTGACCCT+TGG | + | chr5.4:50621177-50621196 | MS.gene050060:CDS | 35.0% |
| !!! | CTACTTTGTTTTGCGTTGTT+GGG | + | chr5.4:50621409-50621428 | MS.gene050060:CDS | 35.0% |
| !!! | TGGATTTGTTTTACCGTTGT+TGG | + | chr5.4:50621308-50621327 | MS.gene050060:CDS | 35.0% |
| AAGAAAAAACGCGAAAACCG+CGG | - | chr5.4:50621124-50621143 | None:intergenic | 40.0% | |
| AAGCAAGGGATTTCAAGCTT+GGG | + | chr5.4:50622367-50622386 | MS.gene050060:CDS | 40.0% | |
| AGTACTATGTTGTGCTAGTG+TGG | + | chr5.4:50622397-50622416 | MS.gene050060:CDS | 40.0% | |
| GATACCAGATAGCAATGAAG+AGG | - | chr5.4:50622478-50622497 | None:intergenic | 40.0% | |
| GATTTCGTAGGTGATTCCAA+GGG | + | chr5.4:50622344-50622363 | MS.gene050060:intron | 40.0% | |
| TGAGAAACAAAAAGAGAGGG+GGG | - | chr5.4:50621815-50621834 | None:intergenic | 40.0% | |
| ! | AATTGGGAGTGTACAAAGCA+TGG | - | chr5.4:50621597-50621616 | None:intergenic | 40.0% |
| ! | ACTTGTTGGTGAGTCTACTA+AGG | + | chr5.4:50621239-50621258 | MS.gene050060:CDS | 40.0% |
| ! | TAGTGTGGAGTGCTATAATG+TGG | + | chr5.4:50622412-50622431 | MS.gene050060:CDS | 40.0% |
| ! | TGTTTTACCGTTGTTGGAGT+TGG | + | chr5.4:50621314-50621333 | MS.gene050060:CDS | 40.0% |
| !! | GTTTTGGCACTGAATTCTGA+TGG | + | chr5.4:50621207-50621226 | MS.gene050060:CDS | 40.0% |
| !!! | GCTACTTTGTTTTGCGTTGT+TGG | + | chr5.4:50621408-50621427 | MS.gene050060:CDS | 40.0% |
| AGCAAGGGATTTCAAGCTTG+GGG | + | chr5.4:50622368-50622387 | MS.gene050060:CDS | 45.0% | |
| CGATTTCGTAGGTGATTCCA+AGG | + | chr5.4:50622343-50622362 | MS.gene050060:intron | 45.0% | |
| CGGTAAGAAAATGTGCAGTG+AGG | - | chr5.4:50622104-50622123 | None:intergenic | 45.0% | |
| GAAGCAAGGGATTTCAAGCT+TGG | + | chr5.4:50622366-50622385 | MS.gene050060:CDS | 45.0% | |
| GAGAAACAAAAAGAGAGGGG+GGG | - | chr5.4:50621814-50621833 | None:intergenic | 45.0% | |
| GTAGAGGTAGTCGTCTAAAC+CGG | - | chr5.4:50621034-50621053 | None:intergenic | 45.0% | |
| TGCCAAAACAACACTCCCAA+GGG | - | chr5.4:50621196-50621215 | None:intergenic | 45.0% | |
| TGTGCCTCTTCATTGCTATC+TGG | + | chr5.4:50622471-50622490 | MS.gene050060:CDS | 45.0% | |
| TTGAAATCCCTTGCTTCCCT+TGG | - | chr5.4:50622363-50622382 | None:intergenic | 45.0% | |
| ! | ACCACCTTTGTTTATCGCCT+CGG | + | chr5.4:50620990-50621009 | MS.gene050060:CDS | 45.0% |
| ! | TTGGCACTGAATTCTGATGG+TGG | + | chr5.4:50621210-50621229 | MS.gene050060:CDS | 45.0% |
| !! | GATGGTGGAGATAGACTTGT+TGG | + | chr5.4:50621225-50621244 | MS.gene050060:CDS | 45.0% |
| !! | TGCTTTGGTGCTCTCACTTT+GGG | + | chr5.4:50622578-50622597 | MS.gene050060:CDS | 45.0% |
| !! | TTGCTTTGGTGCTCTCACTT+TGG | + | chr5.4:50622577-50622596 | MS.gene050060:CDS | 45.0% |
| !! | TTGGCTTCTGCTGCTTTGTA+TGG | + | chr5.4:50621288-50621307 | MS.gene050060:CDS | 45.0% |
| !! | ATTTGAAAAATAAATATAAT+TGG | - | chr5.4:50621614-50621633 | None:intergenic | 5.0% |
| !! | TTTGAAAAATAAATATAATT+GGG | - | chr5.4:50621613-50621632 | None:intergenic | 5.0% |
| !!! | ATTTTTTTAATTCTTTATTT+AGG | + | chr5.4:50622001-50622020 | MS.gene050060:intron | 5.0% |
| AAACAAAAAGAGAGGGGGGG+AGG | - | chr5.4:50621811-50621830 | None:intergenic | 50.0% | |
| AACAAAAAGAGAGGGGGGGA+GGG | - | chr5.4:50621810-50621829 | None:intergenic | 50.0% | |
| ACTGCCGAGGCGATAAACAA+AGG | - | chr5.4:50620997-50621016 | None:intergenic | 50.0% | |
| AGCAGAGAAAGGGGTTGCTT+TGG | + | chr5.4:50622563-50622582 | MS.gene050060:CDS | 50.0% | |
| AGGTGATTCCAAGGGAAGCA+AGG | + | chr5.4:50622352-50622371 | MS.gene050060:intron | 50.0% | |
| GGTGATTCCAAGGGAAGCAA+GGG | + | chr5.4:50622353-50622372 | MS.gene050060:intron | 50.0% | |
| GTGCCAAAACAACACTCCCA+AGG | - | chr5.4:50621197-50621216 | None:intergenic | 50.0% | |
| TTTATCGCCTCGGCAGTCAT+CGG | + | chr5.4:50621000-50621019 | MS.gene050060:CDS | 50.0% | |
| ! | CTCACACTTAGCTTTCACCG+CGG | + | chr5.4:50621104-50621123 | MS.gene050060:CDS | 50.0% |
| !! | GCTTTGGTGCTCTCACTTTG+GGG | + | chr5.4:50622579-50622598 | MS.gene050060:CDS | 50.0% |
| !!! | GACCCTTGGGAGTGTTGTTT+TGG | + | chr5.4:50621191-50621210 | MS.gene050060:CDS | 50.0% |
| ACAAAAAGAGAGGGGGGGAG+GGG | - | chr5.4:50621809-50621828 | None:intergenic | 55.0% | |
| CGCGGTGAAAGCTAAGTGTG+AGG | - | chr5.4:50621106-50621125 | None:intergenic | 55.0% | |
| GCAGTCATCGGAGTTCTCAC+CGG | + | chr5.4:50621012-50621031 | MS.gene050060:CDS | 55.0% | |
| GCCGAGGCGATAAACAAAGG+TGG | - | chr5.4:50620994-50621013 | None:intergenic | 55.0% | |
| ! | CTGCGGCATAAAGCGTCTAC+CGG | + | chr5.4:50621056-50621075 | MS.gene050060:CDS | 55.0% |
| AAAAAGAGAGGGGGGGAGGG+GGG | - | chr5.4:50621807-50621826 | None:intergenic | 60.0% | |
| CAAAAAGAGAGGGGGGGAGG+GGG | - | chr5.4:50621808-50621827 | None:intergenic | 60.0% | |
| CGGTAGACGCTTTATGCCGC+AGG | - | chr5.4:50621058-50621077 | None:intergenic | 60.0% | |
| GACGACTACCTCTACGCCTG+CGG | + | chr5.4:50621039-50621058 | MS.gene050060:CDS | 60.0% | |
| GAGAACTCCGATGACTGCCG+AGG | - | chr5.4:50621010-50621029 | None:intergenic | 60.0% | |
| GCTTTATGCCGCAGGCGTAG+AGG | - | chr5.4:50621050-50621069 | None:intergenic | 60.0% | |
| AAAAGAGAGGGGGGGAGGGG+GGG | - | chr5.4:50621806-50621825 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 50620985 | 50622695 | 50620985 | ID=MS.gene050060 |
| chr5.4 | mRNA | 50620985 | 50622695 | 50620985 | ID=MS.gene050060.t1;Parent=MS.gene050060 |
| chr5.4 | exon | 50620985 | 50621455 | 50620985 | ID=MS.gene050060.t1.exon1;Parent=MS.gene050060.t1 |
| chr5.4 | CDS | 50620985 | 50621455 | 50620985 | ID=cds.MS.gene050060.t1;Parent=MS.gene050060.t1 |
| chr5.4 | exon | 50622354 | 50622695 | 50622354 | ID=MS.gene050060.t1.exon2;Parent=MS.gene050060.t1 |
| chr5.4 | CDS | 50622354 | 50622695 | 50622354 | ID=cds.MS.gene050060.t1;Parent=MS.gene050060.t1 |
| Gene Sequence |
| Protein sequence |
