AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72446

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72446.t1 MTR_2g073240 99.104 670 6 0 1 670 13 682 0.0 1386
MS.gene72446.t1 MTR_0034s0060 89.371 668 70 1 1 668 131 797 0.0 1263
MS.gene72446.t1 MTR_1g009600 74.775 666 156 2 4 669 2 655 0.0 1047
MS.gene72446.t1 MTR_4g102550 82.007 289 52 0 380 668 7 295 7.14e-175 500
MS.gene72446.t1 MTR_3g452330 52.486 181 34 1 85 265 1 129 8.66e-49 171
MS.gene72446.t1 MTR_3g452330 63.918 97 35 0 379 475 141 237 1.22e-33 129
MS.gene72446.t1 MTR_2g096660 30.573 314 189 10 9 312 40 334 8.29e-27 112
MS.gene72446.t1 MTR_4g063600 28.617 311 199 10 9 312 34 328 5.02e-26 110
MS.gene72446.t1 MTR_4g120030 27.619 315 195 11 7 312 111 401 2.82e-25 109
MS.gene72446.t1 MTR_4g063600 28.296 311 197 11 9 312 34 325 2.96e-25 107
MS.gene72446.t1 MTR_8g089180 26.243 362 218 15 1 327 63 410 1.35e-24 107
MS.gene72446.t1 MTR_8g089180 26.243 362 218 15 1 327 63 410 1.35e-24 107
MS.gene72446.t1 MTR_2g032100 25.978 358 224 13 1 327 63 410 3.79e-24 105
MS.gene72446.t1 MTR_1g088480 27.331 311 197 12 9 312 120 408 2.93e-22 100
MS.gene72446.t1 MTR_4g129820 27.193 342 208 9 8 321 96 424 4.38e-22 100
MS.gene72446.t1 MTR_4g024600 26.822 343 208 8 8 321 102 430 2.77e-20 94.7
MS.gene72446.t1 MTR_4g102270 28.274 336 212 10 7 320 93 421 2.24e-19 91.7
MS.gene72446.t1 MTR_5g011940 26.571 350 222 10 5 326 88 430 3.68e-19 90.9
MS.gene72446.t1 MTR_0354s0040 26.608 342 210 8 8 321 83 411 5.99e-19 90.1
MS.gene72446.t1 MTR_8g099535 27.066 351 217 13 7 328 4 344 2.04e-18 87.8
MS.gene72446.t1 MTR_4g134490 24.217 351 225 14 7 327 25 364 4.00e-18 87.0
MS.gene72446.t1 MTR_3g084090 26.647 334 216 10 9 320 101 427 4.15e-17 84.7
MS.gene72446.t1 MTR_4g134490 24.309 362 217 16 7 327 25 370 2.26e-16 82.0
MS.gene72446.t1 MTR_2g032100 27.500 200 130 6 1 193 63 254 1.44e-15 78.6
MS.gene72446.t1 MTR_3g105440 29.796 245 147 9 1 234 1 231 1.48e-14 77.4
MS.gene72446.t1 MTR_3g105440 29.796 245 147 9 1 234 1 231 1.53e-14 77.4
MS.gene72446.t1 MTR_1g107455 24.377 361 218 14 6 318 18 371 1.67e-14 76.3
MS.gene72446.t1 MTR_3g101500 24.280 243 169 6 7 248 2 230 2.32e-12 69.3
MS.gene72446.t1 MTR_4g056100 23.546 361 221 13 6 318 18 371 3.57e-12 68.9
MS.gene72446.t1 MTR_3g101500 24.280 243 169 6 7 248 2 230 3.81e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72446.t1 AT1G78570 88.227 671 75 2 1 669 1 669 0.0 1243
MS.gene72446.t1 AT3G14790 85.501 669 92 2 1 669 1 664 0.0 1172
MS.gene72446.t1 AT3G14790 85.501 669 92 2 1 669 4 667 0.0 1172
MS.gene72446.t1 AT1G53500 85.329 668 94 3 2 669 4 667 0.0 1162
MS.gene72446.t1 AT1G63000 84.099 283 45 0 387 669 15 297 2.07e-179 512
MS.gene72446.t1 AT2G28760 30.032 313 192 10 9 312 33 327 4.70e-28 116
MS.gene72446.t1 AT2G28760 30.032 313 192 10 9 312 33 327 4.70e-28 116
MS.gene72446.t1 AT2G28760 30.032 313 192 10 9 312 33 327 4.70e-28 116
MS.gene72446.t1 AT4G20460 27.714 350 212 12 8 327 71 409 6.85e-28 117
MS.gene72446.t1 AT2G28760 30.032 313 192 10 9 312 64 358 1.18e-27 115
MS.gene72446.t1 AT5G59290 29.712 313 193 10 9 312 3 297 1.30e-27 114
MS.gene72446.t1 AT5G59290 29.712 313 193 10 9 312 32 326 2.00e-27 114
MS.gene72446.t1 AT5G59290 29.712 313 193 10 9 312 25 319 2.73e-27 114
MS.gene72446.t1 AT5G59290 29.712 313 193 10 9 312 47 341 3.01e-27 114
MS.gene72446.t1 AT3G46440 29.393 313 194 10 9 312 31 325 5.01e-27 113
MS.gene72446.t1 AT3G46440 29.393 313 194 10 9 312 31 325 5.01e-27 113
MS.gene72446.t1 AT3G53520 27.187 320 209 10 9 321 122 424 8.42e-25 108
MS.gene72446.t1 AT3G62830 27.157 313 200 10 9 312 121 414 1.23e-24 107
MS.gene72446.t1 AT3G62830 27.157 313 200 10 9 312 121 414 1.23e-24 107
MS.gene72446.t1 AT2G47650 26.837 313 201 10 9 312 123 416 4.81e-24 106
MS.gene72446.t1 AT5G44480 26.989 352 210 15 8 326 72 409 1.11e-23 104
MS.gene72446.t1 AT5G44480 26.989 352 210 15 8 326 72 409 1.11e-23 104
MS.gene72446.t1 AT5G44480 26.989 352 210 15 8 326 72 409 1.11e-23 104
MS.gene72446.t1 AT5G44480 26.989 352 210 15 8 326 96 433 1.36e-23 104
MS.gene72446.t1 AT2G47650 26.498 317 203 10 9 312 123 422 6.44e-23 102
MS.gene72446.t1 AT1G30620 27.809 356 214 15 4 327 65 409 1.38e-22 101
MS.gene72446.t1 AT3G53520 26.875 320 208 11 9 321 122 422 1.52e-22 101
MS.gene72446.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.62e-22 101
MS.gene72446.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.62e-22 101
MS.gene72446.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.62e-22 101
MS.gene72446.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.62e-22 101
MS.gene72446.t1 AT3G53520 25.948 343 207 11 9 321 122 447 9.23e-22 99.4
MS.gene72446.t1 AT1G63180 26.331 357 222 14 1 327 1 346 9.88e-21 94.7
MS.gene72446.t1 AT4G00110 26.844 339 219 8 8 324 92 423 2.20e-20 94.7
MS.gene72446.t1 AT2G45310 26.866 335 216 9 9 321 99 426 1.02e-19 92.8
MS.gene72446.t1 AT1G02000 25.893 336 220 9 8 321 93 421 8.63e-19 90.1
MS.gene72446.t1 AT4G30440 30.901 233 151 6 8 234 89 317 2.73e-18 88.6
MS.gene72446.t1 AT1G64440 27.920 351 210 15 8 327 4 342 6.64e-18 86.3
MS.gene72446.t1 AT1G30620 29.949 197 123 6 4 193 66 254 1.48e-17 84.3
MS.gene72446.t1 AT3G53520 27.897 233 148 7 8 234 121 339 2.18e-17 84.7
MS.gene72446.t1 AT1G63180 26.689 296 181 11 1 267 1 289 4.20e-16 80.1
MS.gene72446.t1 AT4G23920 26.163 344 219 12 7 323 3 338 4.29e-16 80.9
MS.gene72446.t1 AT3G23820 26.567 335 217 10 8 320 113 440 1.68e-15 80.1
MS.gene72446.t1 AT1G47290 26.757 370 201 15 3 319 6 358 6.91e-15 77.4
MS.gene72446.t1 AT4G12250 26.100 341 223 8 3 321 92 425 1.46e-14 77.0
MS.gene72446.t1 AT1G47290 26.757 370 201 15 3 319 6 358 1.65e-14 76.6
MS.gene72446.t1 AT2G26260 26.506 249 148 8 2 234 5 234 1.83e-13 73.9
MS.gene72446.t1 AT1G73250 27.473 182 120 5 151 322 140 319 8.56e-13 70.5

Find 162 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAAACAGCATGACAATTT+TGG 0.160340 2.3:-22793737 MS.gene72446:CDS
TGGGAACTCATTCTTCAATT+TGG 0.167758 2.3:+22793507 None:intergenic
AGGTTCAGGCATTGGGTTTA+AGG 0.187878 2.3:-22794120 MS.gene72446:CDS
GCTTACCATTGCCTTGGTTT+TGG 0.211812 2.3:+22794061 None:intergenic
TCTTTGATGGAAAGCAATTC+TGG 0.218557 2.3:+22793487 None:intergenic
TTCACCAAGAACAACATTTA+TGG 0.223050 2.3:-22795304 MS.gene72446:CDS
GTTGGACATGTTTACAATAT+TGG 0.241068 2.3:-22794881 MS.gene72446:CDS
CCCTTCACAAACTTGAAGTT+TGG 0.241790 2.3:+22795442 None:intergenic
TTTGCCATCTCAATTGAAAT+AGG 0.250438 2.3:+22793703 None:intergenic
ATTGCCAAGAGGATAAATTT+TGG 0.258449 2.3:+22795010 None:intergenic
TAGAAAGAACCGGCGAAATT+AGG 0.282017 2.3:+22794086 None:intergenic
CCTCTCAAGTTCTTGATCTA+TGG 0.292307 2.3:-22794461 MS.gene72446:CDS
AACCCAATGCCTGAACCTTC+TGG 0.294957 2.3:+22794125 None:intergenic
CTTGATAAGTGATTCTTTGA+TGG 0.295568 2.3:+22793474 None:intergenic
CAAGGGATTCCATATGAATA+TGG 0.304468 2.3:-22794392 MS.gene72446:CDS
GATCTGACCAGTTACCTTGC+AGG 0.308835 2.3:+22795261 None:intergenic
ATGACAATGTATGCACTCTA+AGG 0.309718 2.3:-22793843 MS.gene72446:CDS
TCCAAAATTGTCATGCTGTT+TGG 0.315000 2.3:+22793736 None:intergenic
ACTCATGTCGACAACTCTTT+TGG 0.326250 2.3:-22795340 MS.gene72446:CDS
AAGTTAGCCCACTTGAAGTT+TGG 0.358387 2.3:+22793592 None:intergenic
ATCCAGAAGGTTCAGGCATT+GGG 0.362912 2.3:-22794127 MS.gene72446:CDS
TGAGAAGAGTTTGCAAATAT+CGG 0.373028 2.3:+22794823 None:intergenic
AGTACCATAAATGTTGTTCT+TGG 0.373878 2.3:+22795300 None:intergenic
ACACGTGGAAACAATGTCTA+TGG 0.379199 2.3:-22795061 MS.gene72446:CDS
GGAAAAGTTCTTCCGATTCA+TGG 0.380568 2.3:-22794983 MS.gene72446:CDS
ACTCACATCGCCCCACCAAT+TGG 0.381095 2.3:+22794643 None:intergenic
GGTTGGATCGGTGGTTTGCT+TGG 0.389171 2.3:-22794431 MS.gene72446:CDS
AGAGGAACTTAAGAGGTATC+TGG 0.393037 2.3:-22793681 MS.gene72446:CDS
CCGTACTCTGCAACAAAAGC+TGG 0.402137 2.3:-22795139 MS.gene72446:CDS
CTTTGATGGAAAGCAATTCT+GGG 0.407319 2.3:+22793488 None:intergenic
ATGTTGCCAACCGGCTTATC+CGG 0.407727 2.3:-22795549 MS.gene72446:CDS
ATCCTCATTACCGGGGCAGC+TGG 0.408875 2.3:-22795586 MS.gene72446:CDS
TTAGAAGCCTGCAAGGTAAC+TGG 0.410611 2.3:-22795268 MS.gene72446:CDS
CGATCAAAAGTTGAAGGTGT+TGG 0.413891 2.3:-22794732 MS.gene72446:CDS
CAAACTCTTCTCAATTGATC+CGG 0.414049 2.3:-22794813 MS.gene72446:CDS
GATTCCAAAATTTATCCTCT+TGG 0.417223 2.3:-22795014 MS.gene72446:CDS
GTTGGATCGGTGGTTTGCTT+GGG 0.417488 2.3:-22794430 MS.gene72446:CDS
ACAGATGAGGATGCGGTTGT+TGG 0.419126 2.3:-22795196 MS.gene72446:CDS
GTAAGCACCGATGAGGTCTA+TGG 0.423871 2.3:-22795223 MS.gene72446:CDS
TCTTGACGATCAAAAGTTGA+AGG 0.429287 2.3:-22794738 MS.gene72446:CDS
AAGTTTGGAGATGATCTTGA+AGG 0.433792 2.3:+22795457 None:intergenic
TGGTAGGTCGTATGGATTAC+CGG 0.436380 2.3:-22795092 MS.gene72446:CDS
CTTGTTGTAACGTGAAATCT+TGG 0.437473 2.3:+22793771 None:intergenic
CATCCAGAAGGTTCAGGCAT+TGG 0.437868 2.3:-22794128 MS.gene72446:CDS
TTGCGTCTCATGTTGCCAAC+CGG 0.441564 2.3:-22795558 MS.gene72446:CDS
ATTCCATATGAATATGGAAA+AGG 0.444160 2.3:-22794386 MS.gene72446:CDS
GAAGAGCCAATGCTCTTTGT+AGG 0.448024 2.3:+22794494 None:intergenic
TAGCTAGCTTACCATTGCCT+TGG 0.452476 2.3:+22794055 None:intergenic
CGTTGTTGGGACTTTAACAT+TGG 0.453861 2.3:-22794225 MS.gene72446:CDS
TTCAATGCAGCAGGTGTGAC+TGG 0.455424 2.3:-22794302 MS.gene72446:CDS
GTATAAAATTTGTAGAGAAC+AGG 0.456495 2.3:-22794784 MS.gene72446:CDS
GAAGCTCATCCAGAAGGTTC+AGG 0.456647 2.3:-22794134 MS.gene72446:CDS
GATTCGCACCAATCAACATT+AGG 0.457249 2.3:+22794275 None:intergenic
AAGTACCTCTGATCATTAAA+CGG 0.458517 2.3:+22794761 None:intergenic
TTTGAAGTTATCCTTCATAA+GGG 0.460918 2.3:-22794908 MS.gene72446:CDS
CCATCCGTGTCAACGTTGTT+GGG 0.465475 2.3:-22794238 MS.gene72446:CDS
CGCAATGAATCCAGCTGCCC+CGG 0.466589 2.3:+22795576 None:intergenic
ACCATCCGTGTCAACGTTGT+TGG 0.468379 2.3:-22794239 MS.gene72446:CDS
TCGTTGTGGCTCACGGCGCC+AGG 0.468437 2.3:+22793646 None:intergenic
TTCTTGATCTATGGAAAGAC+TGG 0.468627 2.3:-22794452 MS.gene72446:CDS
ATCTGGAACTTCACAAATCC+TGG 0.470303 2.3:-22793664 MS.gene72446:CDS
AGACCTCATCGGTGCTTACA+TGG 0.473323 2.3:+22795227 None:intergenic
CTCACATCGCCCCACCAATT+GGG 0.477881 2.3:+22794644 None:intergenic
GTTGAAGGTGTTGGGTTGGT+CGG 0.479058 2.3:-22794723 MS.gene72446:CDS
TTACAATATTGGAACTAAGA+AGG 0.484035 2.3:-22794870 MS.gene72446:CDS
CGTACTCTGCAACAAAAGCT+GGG 0.487722 2.3:-22795138 MS.gene72446:CDS
GTTGCAGAGTACGGATTTGT+TGG 0.489137 2.3:+22795148 None:intergenic
GAGATGATCTTGAAGGAATG+AGG 0.489742 2.3:+22795464 None:intergenic
GGTATATCAACAATCCCAAT+TGG 0.492254 2.3:-22794658 MS.gene72446:CDS
TTGCTTAGGTCAGATGAAAT+CGG 0.492377 2.3:+22793811 None:intergenic
TCTTCCTATTTCAATTGAGA+TGG 0.498900 2.3:-22793707 MS.gene72446:CDS
TCTTGCAGCAACTATCACTT+TGG 0.499126 2.3:+22793552 None:intergenic
ATCCTTCATAAGGGAGAGGT+TGG 0.502469 2.3:-22794899 MS.gene72446:CDS
TTCCATATGAATATGGAAAA+GGG 0.506901 2.3:-22794385 MS.gene72446:CDS
TGATCTATGGAAAGACTGGT+TGG 0.511007 2.3:-22794448 MS.gene72446:CDS
TAGCATAGTTCATCATCAAA+AGG 0.516883 2.3:+22794180 None:intergenic
GTTCTTCCGATTCATGGTGA+TGG 0.517259 2.3:-22794977 MS.gene72446:CDS
ATGGCGTATGGTAGGTCGTA+TGG 0.518022 2.3:-22795100 MS.gene72446:CDS
GGGAAATTGTGCGAGAAACA+AGG 0.518098 2.3:-22794410 MS.gene72446:CDS
TGCAAGAAGCAACAATGAAA+TGG 0.518316 2.3:-22793536 MS.gene72446:CDS
TGAAATTGCGTGGATTGCTT+AGG 0.528340 2.3:+22793797 None:intergenic
TCCAAACTTCAAGTTTGTGA+AGG 0.531089 2.3:-22795443 MS.gene72446:CDS
TTTATCCTCTTGGCAATGCA+AGG 0.531302 2.3:-22795004 MS.gene72446:CDS
TTTCCACGTGTTGTGATCAC+CGG 0.531578 2.3:+22795073 None:intergenic
TTGATGATGAACTATGCTAC+CGG 0.533136 2.3:-22794176 MS.gene72446:CDS
GATCAAAAGTTGAAGGTGTT+GGG 0.534566 2.3:-22794731 MS.gene72446:CDS
TTTGAACCATCACCATGAAT+CGG 0.534712 2.3:+22794971 None:intergenic
ATTGTTGATATACCAGTCCA+TGG 0.535147 2.3:+22794667 None:intergenic
CTGGTAGACCTAATGTTGAT+TGG 0.535864 2.3:-22794283 MS.gene72446:CDS
GAGAGAACAACATGGGAAGA+AGG 0.538587 2.3:-22794701 MS.gene72446:CDS
GTCCAACCTCTCCCTTATGA+AGG 0.542052 2.3:+22794897 None:intergenic
CCAAACTTCAAGTTTGTGAA+GGG 0.547634 2.3:-22795442 MS.gene72446:CDS
TATCAACAATCCCAATTGGT+GGG 0.547759 2.3:-22794654 MS.gene72446:CDS
GGAAAGACTGGTTGGATCGG+TGG 0.548201 2.3:-22794440 MS.gene72446:CDS
CCGAAAATGTTAATGATGCC+TGG 0.549298 2.3:-22794602 MS.gene72446:CDS
GTTAATGATGCCTGGTGGGA+TGG 0.550016 2.3:-22794594 MS.gene72446:CDS
CGGGATAGTTCCGGATAAGC+CGG 0.551283 2.3:+22795539 None:intergenic
ATCCAGCTGCCCCGGTAATG+AGG 0.552923 2.3:+22795584 None:intergenic
CGATAGACTCAGTGATGAGA+AGG 0.555937 2.3:+22795389 None:intergenic
GGATGGAGAGACATTTCAAT+GGG 0.556466 2.3:-22794577 MS.gene72446:CDS
TTCTTTCTATTCCAAAACCA+AGG 0.556902 2.3:-22794072 MS.gene72446:CDS
ATGGCAAAGAGGAACTTAAG+AGG 0.557287 2.3:-22793688 MS.gene72446:CDS
CCCAACAACGTTGACACGGA+TGG 0.559674 2.3:+22794238 None:intergenic
AGTTATCCTTCATAAGGGAG+AGG 0.562307 2.3:-22794903 MS.gene72446:CDS
AAAAGTTGAAGGTGTTGGGT+TGG 0.566545 2.3:-22794727 MS.gene72446:CDS
CTATTCCAAAACCAAGGCAA+TGG 0.566752 2.3:-22794066 MS.gene72446:intron
CCATAGATCAAGAACTTGAG+AGG 0.567522 2.3:+22794461 None:intergenic
ACATTGATCCAAACTTCAAG+TGG 0.569167 2.3:-22793600 MS.gene72446:CDS
AAATGTCTCTCCATCCCACC+AGG 0.569236 2.3:+22794584 None:intergenic
GGGATGGAGAGACATTTCAA+TGG 0.570949 2.3:-22794578 MS.gene72446:CDS
GAAATGCTTGTCATGGCGTA+TGG 0.574187 2.3:-22795112 MS.gene72446:CDS
GAAGACACTCCTAATTTCGC+CGG 0.574480 2.3:-22794095 MS.gene72446:CDS
TGCTTGTCATGGCGTATGGT+AGG 0.577398 2.3:-22795108 MS.gene72446:CDS
CTCAAGTACTAATACTCGAA+TGG 0.579731 2.3:-22794525 MS.gene72446:CDS
GGAAATTGTGCGAGAAACAA+GGG 0.584272 2.3:-22794409 MS.gene72446:CDS
TGGAGAGACAGATGAGGATG+CGG 0.589535 2.3:-22795203 MS.gene72446:CDS
TATGGAAAGACTGGTTGGAT+CGG 0.590002 2.3:-22794443 MS.gene72446:CDS
GAGCCAATGCTCTTTGTAGG+TGG 0.595767 2.3:+22794497 None:intergenic
GTTCCACCTACAAAGAGCAT+TGG 0.596551 2.3:-22794500 MS.gene72446:CDS
TGAGGATCGTTCATCACTCG+TGG 0.597692 2.3:-22794357 MS.gene72446:CDS
ATATCAACAATCCCAATTGG+TGG 0.602384 2.3:-22794655 MS.gene72446:CDS
ATCAACAATCCCAATTGGTG+GGG 0.603337 2.3:-22794653 MS.gene72446:CDS
GCTTGAAGAAAACCATGGAC+TGG 0.603416 2.3:-22794679 MS.gene72446:CDS
TACGATGAAGCTCATCCAGA+AGG 0.603432 2.3:-22794140 MS.gene72446:CDS
GTATTAGTACTTGAGACAAA+CGG 0.603642 2.3:+22794533 None:intergenic
GAGAATCTCGTTGTGGCTCA+CGG 0.604501 2.3:+22793639 None:intergenic
TGGGGCTGAAATGCTTGTCA+TGG 0.606750 2.3:-22795119 MS.gene72446:CDS
GCTGCATTGAAAATATGAGT+TGG 0.608521 2.3:+22794314 None:intergenic
TGTCTCTCCATAGACCTCAT+CGG 0.613230 2.3:+22795216 None:intergenic
AATTGGTGGGGCGATGTGAG+TGG 0.613931 2.3:-22794641 MS.gene72446:CDS
CAAGATTTCACGTTACAACA+AGG 0.614267 2.3:-22793770 MS.gene72446:CDS
AACAGTAATCGAGTTTGTCG+AGG 0.615310 2.3:+22795500 None:intergenic
TGATGATGAACTATGCTACC+GGG 0.618950 2.3:-22794175 MS.gene72446:CDS
TGACAATGTATGCACTCTAA+GGG 0.624920 2.3:-22793842 MS.gene72446:CDS
ATATTGGAACTAAGAAGGAA+AGG 0.626669 2.3:-22794865 MS.gene72446:CDS
TGTCTTATTAGAAGCCTGCA+AGG 0.627248 2.3:-22795275 MS.gene72446:CDS
TTTCAATTGAGATGGCAAAG+AGG 0.627252 2.3:-22793699 MS.gene72446:CDS
ATCGTACTCGAATATGCACC+CGG 0.629832 2.3:+22794157 None:intergenic
AAGTCCCAACAACGTTGACA+CGG 0.632986 2.3:+22794234 None:intergenic
ATAGTTCCGGATAAGCCGGT+TGG 0.636641 2.3:+22795543 None:intergenic
CATTGATCCAAACTTCAAGT+GGG 0.639418 2.3:-22793599 MS.gene72446:CDS
ATCTTGGTGATGAAATTGCG+TGG 0.642464 2.3:+22793787 None:intergenic
GAAGAGTTTGCAAATATCGG+TGG 0.643094 2.3:+22794826 None:intergenic
ATATGGAAAAGGGCGTCTTG+AGG 0.643401 2.3:-22794375 MS.gene72446:CDS
TGATGAGAAGGTAGTTGACA+AGG 0.649249 2.3:+22795401 None:intergenic
AGAAGGCTTGAAGAAAACCA+TGG 0.651189 2.3:-22794684 MS.gene72446:CDS
GGTCTATGGAGAGACAGATG+AGG 0.654888 2.3:-22795209 MS.gene72446:CDS
TAGATCAAGAACTTGAGAGG+AGG 0.663040 2.3:+22794464 None:intergenic
ACAGGCCGTTTAATGATCAG+AGG 0.664360 2.3:-22794766 MS.gene72446:CDS
ACATCTCGAGAATCTCGTTG+TGG 0.664572 2.3:+22793632 None:intergenic
AAGTACTAATACTCGAATGG+TGG 0.665787 2.3:-22794522 MS.gene72446:CDS
AAATGTTAATGATGCCTGGT+GGG 0.666092 2.3:-22794598 MS.gene72446:CDS
TTACCGGTGATCACAACACG+TGG 0.677722 2.3:-22795076 MS.gene72446:CDS
CATCCATGTAAGCACCGATG+AGG 0.678457 2.3:-22795230 MS.gene72446:CDS
GTATTGTGAAGATGTTGCAG+AGG 0.681547 2.3:-22794933 MS.gene72446:CDS
GTACTCTGCAACAAAAGCTG+GGG 0.681769 2.3:-22795137 MS.gene72446:CDS
GAAGTAGCTGAGAAGCCTCG+TGG 0.688718 2.3:+22795170 None:intergenic
TTGGTCGGAGAGAACAACAT+GGG 0.701272 2.3:-22794708 MS.gene72446:CDS
ATGGTGATGGTTCAAATGTG+AGG 0.706627 2.3:-22794964 MS.gene72446:CDS
GTTGGTCGGAGAGAACAACA+TGG 0.719943 2.3:-22794709 MS.gene72446:CDS
TGCGGTTGTTGGAAACCACG+AGG 0.732893 2.3:-22795185 MS.gene72446:CDS
AAAATGTTAATGATGCCTGG+TGG 0.736377 2.3:-22794599 MS.gene72446:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCATATTCATAATCATAA+TGG + chr2.3:22795132-22795151 None:intergenic 15.0%
!! CAAAAAAAAAGGAATCATAA+TGG + chr2.3:22795050-22795069 None:intergenic 20.0%
!!! ATTCATAATCATAATGGAAA+TGG + chr2.3:22795126-22795145 None:intergenic 20.0%
! ATTCCATATGAATATGGAAA+AGG - chr2.3:22794665-22794684 MS.gene72446:CDS 25.0%
! GTATAAAATTTGTAGAGAAC+AGG - chr2.3:22794267-22794286 MS.gene72446:CDS 25.0%
! TTACAATATTGGAACTAAGA+AGG - chr2.3:22794181-22794200 MS.gene72446:CDS 25.0%
! TTCCATATGAATATGGAAAA+GGG - chr2.3:22794666-22794685 MS.gene72446:CDS 25.0%
!! AAAAGGAATCATAATGGAAA+CGG + chr2.3:22795044-22795063 None:intergenic 25.0%
!! TTGAACAAGATTTGTTCAAT+AGG + chr2.3:22795097-22795116 None:intergenic 25.0%
!! TTTGAAGTTATCCTTCATAA+GGG - chr2.3:22794143-22794162 MS.gene72446:CDS 25.0%
!!! AATTTTGGAATCAACTTTTC+AGG + chr2.3:22794029-22794048 None:intergenic 25.0%
!!! ACAAATTTTATACTAGTCTC+CGG + chr2.3:22794260-22794279 None:intergenic 25.0%
!!! TTCCTTTTTTTTTGAAATCG+AGG - chr2.3:22795056-22795075 MS.gene72446:CDS 25.0%
!!! TTTTGAAGTTATCCTTCATA+AGG - chr2.3:22794142-22794161 MS.gene72446:CDS 25.0%
AAGTACCTCTGATCATTAAA+CGG + chr2.3:22794293-22794312 None:intergenic 30.0%
AGTACCATAAATGTTGTTCT+TGG + chr2.3:22793754-22793773 None:intergenic 30.0%
ATATTGGAACTAAGAAGGAA+AGG - chr2.3:22794186-22794205 MS.gene72446:CDS 30.0%
CTTGATAAGTGATTCTTTGA+TGG + chr2.3:22795580-22795599 None:intergenic 30.0%
GATTCCAAAATTTATCCTCT+TGG - chr2.3:22794037-22794056 MS.gene72446:intron 30.0%
GTATTAGTACTTGAGACAAA+CGG + chr2.3:22794521-22794540 None:intergenic 30.0%
GTCCTCGATTTCAAAAAAAA+AGG + chr2.3:22795061-22795080 None:intergenic 30.0%
GTTGGACATGTTTACAATAT+TGG - chr2.3:22794170-22794189 MS.gene72446:CDS 30.0%
TAGCATAGTTCATCATCAAA+AGG + chr2.3:22794874-22794893 None:intergenic 30.0%
TCTTCCTATTTCAATTGAGA+TGG - chr2.3:22795344-22795363 MS.gene72446:CDS 30.0%
TGAGAAGAGTTTGCAAATAT+CGG + chr2.3:22794231-22794250 None:intergenic 30.0%
TTAATCTGTGAATGTTTCTC+AGG - chr2.3:22795164-22795183 MS.gene72446:CDS 30.0%
TTCACCAAGAACAACATTTA+TGG - chr2.3:22793747-22793766 MS.gene72446:CDS 30.0%
TTCTTTCTATTCCAAAACCA+AGG - chr2.3:22794979-22794998 MS.gene72446:CDS 30.0%
TTTGCCATCTCAATTGAAAT+AGG + chr2.3:22795351-22795370 None:intergenic 30.0%
! ATCATTAACATTTTCGGATG+AGG + chr2.3:22794446-22794465 None:intergenic 30.0%
! ATTGCCAAGAGGATAAATTT+TGG + chr2.3:22794044-22794063 None:intergenic 30.0%
AAAAAACATCCTCATTACCG+GGG - chr2.3:22793458-22793477 MS.gene72446:CDS 35.0%
AAAATGTTAATGATGCCTGG+TGG - chr2.3:22794452-22794471 MS.gene72446:CDS 35.0%
AAATGTTAATGATGCCTGGT+GGG - chr2.3:22794453-22794472 MS.gene72446:CDS 35.0%
AAGTACTAATACTCGAATGG+TGG - chr2.3:22794529-22794548 MS.gene72446:CDS 35.0%
AAGTTTGGAGATGATCTTGA+AGG + chr2.3:22793597-22793616 None:intergenic 35.0%
ACATTGATCCAAACTTCAAG+TGG - chr2.3:22795451-22795470 MS.gene72446:CDS 35.0%
ATATCAACAATCCCAATTGG+TGG - chr2.3:22794396-22794415 MS.gene72446:CDS 35.0%
ATGACAATGTATGCACTCTA+AGG - chr2.3:22795208-22795227 MS.gene72446:CDS 35.0%
ATTGTTGATATACCAGTCCA+TGG + chr2.3:22794387-22794406 None:intergenic 35.0%
CAAAAAACATCCTCATTACC+GGG - chr2.3:22793457-22793476 MS.gene72446:CDS 35.0%
CAAACTCTTCTCAATTGATC+CGG - chr2.3:22794238-22794257 MS.gene72446:CDS 35.0%
CAAGATTTCACGTTACAACA+AGG - chr2.3:22795281-22795300 MS.gene72446:CDS 35.0%
CAAGGGATTCCATATGAATA+TGG - chr2.3:22794659-22794678 MS.gene72446:CDS 35.0%
CATTGATCCAAACTTCAAGT+GGG - chr2.3:22795452-22795471 MS.gene72446:CDS 35.0%
CCAAAAAACATCCTCATTAC+CGG - chr2.3:22793456-22793475 MS.gene72446:CDS 35.0%
CTCAAGTACTAATACTCGAA+TGG - chr2.3:22794526-22794545 MS.gene72446:CDS 35.0%
CTTTGATGGAAAGCAATTCT+GGG + chr2.3:22795566-22795585 None:intergenic 35.0%
GCTGCATTGAAAATATGAGT+TGG + chr2.3:22794740-22794759 None:intergenic 35.0%
GGTATATCAACAATCCCAAT+TGG - chr2.3:22794393-22794412 MS.gene72446:CDS 35.0%
TATCAACAATCCCAATTGGT+GGG - chr2.3:22794397-22794416 MS.gene72446:CDS 35.0%
TCCAAAATTGTCATGCTGTT+TGG + chr2.3:22795318-22795337 None:intergenic 35.0%
TCTTGACGATCAAAAGTTGA+AGG - chr2.3:22794313-22794332 MS.gene72446:CDS 35.0%
TCTTTGATGGAAAGCAATTC+TGG + chr2.3:22795567-22795586 None:intergenic 35.0%
TGACAATGTATGCACTCTAA+GGG - chr2.3:22795209-22795228 MS.gene72446:CDS 35.0%
TGCAAGAAGCAACAATGAAA+TGG - chr2.3:22795515-22795534 MS.gene72446:CDS 35.0%
TGGGAACTCATTCTTCAATT+TGG + chr2.3:22795547-22795566 None:intergenic 35.0%
TTCTTGATCTATGGAAAGAC+TGG - chr2.3:22794599-22794618 MS.gene72446:CDS 35.0%
TTGCTTAGGTCAGATGAAAT+CGG + chr2.3:22795243-22795262 None:intergenic 35.0%
TTTCAATTGAGATGGCAAAG+AGG - chr2.3:22795352-22795371 MS.gene72446:CDS 35.0%
TTTGAACCATCACCATGAAT+CGG + chr2.3:22794083-22794102 None:intergenic 35.0%
! ACTCATATTTTCAATGCAGC+AGG - chr2.3:22794740-22794759 MS.gene72446:CDS 35.0%
! AGGACAACAATTTTGTAGTC+GGG + chr2.3:22793534-22793553 None:intergenic 35.0%
! CCAAACTTCAAGTTTGTGAA+GGG - chr2.3:22793609-22793628 MS.gene72446:CDS 35.0%
! CCAGGCATCATTAACATTTT+CGG + chr2.3:22794452-22794471 None:intergenic 35.0%
! CTTGTTGTAACGTGAAATCT+TGG + chr2.3:22795283-22795302 None:intergenic 35.0%
! GAGGACAACAATTTTGTAGT+CGG + chr2.3:22793535-22793554 None:intergenic 35.0%
! TCCAAACAGCATGACAATTT+TGG - chr2.3:22795314-22795333 MS.gene72446:CDS 35.0%
! TCCAAACTTCAAGTTTGTGA+AGG - chr2.3:22793608-22793627 MS.gene72446:CDS 35.0%
!! AACTTTTCAGGAAACTGGTT+CGG + chr2.3:22794017-22794036 None:intergenic 35.0%
!! GAATCAACTTTTCAGGAAAC+TGG + chr2.3:22794022-22794041 None:intergenic 35.0%
!! GATCAAAAGTTGAAGGTGTT+GGG - chr2.3:22794320-22794339 MS.gene72446:CDS 35.0%
!! TTGATGATGAACTATGCTAC+CGG - chr2.3:22794875-22794894 MS.gene72446:CDS 35.0%
!!! CGGTAATGAGGATGTTTTTT+GGG + chr2.3:22793458-22793477 None:intergenic 35.0%
!!! GGTAATGAGGATGTTTTTTG+GGG + chr2.3:22793457-22793476 None:intergenic 35.0%
!!! GGTTTTGGAATAGAAAGAAC+CGG + chr2.3:22794978-22794997 None:intergenic 35.0%
AACAGTAATCGAGTTTGTCG+AGG + chr2.3:22793554-22793573 None:intergenic 40.0%
AAGTTAGCCCACTTGAAGTT+TGG + chr2.3:22795462-22795481 None:intergenic 40.0%
ACACGTGGAAACAATGTCTA+TGG - chr2.3:22793990-22794009 MS.gene72446:intron 40.0%
AGAAGGCTTGAAGAAAACCA+TGG - chr2.3:22794367-22794386 MS.gene72446:CDS 40.0%
AGTTATCCTTCATAAGGGAG+AGG - chr2.3:22794148-22794167 MS.gene72446:CDS 40.0%
ATCAACAATCCCAATTGGTG+GGG - chr2.3:22794398-22794417 MS.gene72446:CDS 40.0%
ATGGCAAAGAGGAACTTAAG+AGG - chr2.3:22795363-22795382 MS.gene72446:CDS 40.0%
CCATAGATCAAGAACTTGAG+AGG + chr2.3:22794593-22794612 None:intergenic 40.0%
CCCTTCACAAACTTGAAGTT+TGG + chr2.3:22793612-22793631 None:intergenic 40.0%
CCGAAAATGTTAATGATGCC+TGG - chr2.3:22794449-22794468 MS.gene72446:CDS 40.0%
CCTCTCAAGTTCTTGATCTA+TGG - chr2.3:22794590-22794609 MS.gene72446:CDS 40.0%
CGTTGTTGGGACTTTAACAT+TGG - chr2.3:22794826-22794845 MS.gene72446:CDS 40.0%
CTATTCCAAAACCAAGGCAA+TGG - chr2.3:22794985-22795004 MS.gene72446:CDS 40.0%
CTGGTAGACCTAATGTTGAT+TGG - chr2.3:22794768-22794787 MS.gene72446:CDS 40.0%
GAAGAGTTTGCAAATATCGG+TGG + chr2.3:22794228-22794247 None:intergenic 40.0%
GAGATGATCTTGAAGGAATG+AGG + chr2.3:22793590-22793609 None:intergenic 40.0%
GATTCGCACCAATCAACATT+AGG + chr2.3:22794779-22794798 None:intergenic 40.0%
GGAAAAGTTCTTCCGATTCA+TGG - chr2.3:22794068-22794087 MS.gene72446:CDS 40.0%
GGAAATTGTGCGAGAAACAA+GGG - chr2.3:22794642-22794661 MS.gene72446:CDS 40.0%
GGATGGAGAGACATTTCAAT+GGG - chr2.3:22794474-22794493 MS.gene72446:CDS 40.0%
GTATTGTGAAGATGTTGCAG+AGG - chr2.3:22794118-22794137 MS.gene72446:CDS 40.0%
TAGAAAGAACCGGCGAAATT+AGG + chr2.3:22794968-22794987 None:intergenic 40.0%
TAGATCAAGAACTTGAGAGG+AGG + chr2.3:22794590-22794609 None:intergenic 40.0%
TCTTGCAGCAACTATCACTT+TGG + chr2.3:22795502-22795521 None:intergenic 40.0%
TGATCTATGGAAAGACTGGT+TGG - chr2.3:22794603-22794622 MS.gene72446:CDS 40.0%
TGATGAGAAGGTAGTTGACA+AGG + chr2.3:22793653-22793672 None:intergenic 40.0%
TTTATCCTCTTGGCAATGCA+AGG - chr2.3:22794047-22794066 MS.gene72446:intron 40.0%
! ACTCATGTCGACAACTCTTT+TGG - chr2.3:22793711-22793730 MS.gene72446:CDS 40.0%
! ATCTGGAACTTCACAAATCC+TGG - chr2.3:22795387-22795406 MS.gene72446:CDS 40.0%
! CGATCAAAAGTTGAAGGTGT+TGG - chr2.3:22794319-22794338 MS.gene72446:CDS 40.0%
! CGCCCTTTTCCATATTCATA+TGG + chr2.3:22794671-22794690 None:intergenic 40.0%
! TATGGAAAGACTGGTTGGAT+CGG - chr2.3:22794608-22794627 MS.gene72446:CDS 40.0%
! TGAAATTGCGTGGATTGCTT+AGG + chr2.3:22795257-22795276 None:intergenic 40.0%
! TGATGATGAACTATGCTACC+GGG - chr2.3:22794876-22794895 MS.gene72446:CDS 40.0%
! TGTCTTATTAGAAGCCTGCA+AGG - chr2.3:22793776-22793795 MS.gene72446:CDS 40.0%
! TTTTGTAGTCGGGATAGTTC+CGG + chr2.3:22793524-22793543 None:intergenic 40.0%
!! AAAAGTTGAAGGTGTTGGGT+TGG - chr2.3:22794324-22794343 MS.gene72446:CDS 40.0%
!! ACTTTTCAGGAAACTGGTTC+GGG + chr2.3:22794016-22794035 None:intergenic 40.0%
!! AGAGGAACTTAAGAGGTATC+TGG - chr2.3:22795370-22795389 MS.gene72446:CDS 40.0%
!! ATCTTGGTGATGAAATTGCG+TGG + chr2.3:22795267-22795286 None:intergenic 40.0%
!! ATGGTGATGGTTCAAATGTG+AGG - chr2.3:22794087-22794106 MS.gene72446:CDS 40.0%
!!! CCGGTAATGAGGATGTTTTT+TGG + chr2.3:22793459-22793478 None:intergenic 40.0%
AAGTCCCAACAACGTTGACA+CGG + chr2.3:22794820-22794839 None:intergenic 45.0%
ACAGGCCGTTTAATGATCAG+AGG - chr2.3:22794285-22794304 MS.gene72446:CDS 45.0%
ACATCTCGAGAATCTCGTTG+TGG + chr2.3:22795422-22795441 None:intergenic 45.0%
ATCCAGAAGGTTCAGGCATT+GGG - chr2.3:22794924-22794943 MS.gene72446:CDS 45.0%
ATCCTTCATAAGGGAGAGGT+TGG - chr2.3:22794152-22794171 MS.gene72446:CDS 45.0%
ATCGTACTCGAATATGCACC+CGG + chr2.3:22794897-22794916 None:intergenic 45.0%
CGATAGACTCAGTGATGAGA+AGG + chr2.3:22793665-22793684 None:intergenic 45.0%
CGTACTCTGCAACAAAAGCT+GGG - chr2.3:22793913-22793932 MS.gene72446:intron 45.0%
GAAATGCTTGTCATGGCGTA+TGG - chr2.3:22793939-22793958 MS.gene72446:intron 45.0%
GAAGACACTCCTAATTTCGC+CGG - chr2.3:22794956-22794975 MS.gene72446:CDS 45.0%
GAAGAGCCAATGCTCTTTGT+AGG + chr2.3:22794560-22794579 None:intergenic 45.0%
GAGAGAACAACATGGGAAGA+AGG - chr2.3:22794350-22794369 MS.gene72446:CDS 45.0%
GCTTGAAGAAAACCATGGAC+TGG - chr2.3:22794372-22794391 MS.gene72446:CDS 45.0%
GGGAAATTGTGCGAGAAACA+AGG - chr2.3:22794641-22794660 MS.gene72446:CDS 45.0%
GGGATGGAGAGACATTTCAA+TGG - chr2.3:22794473-22794492 MS.gene72446:CDS 45.0%
GTACTCTGCAACAAAAGCTG+GGG - chr2.3:22793914-22793933 MS.gene72446:intron 45.0%
GTTCTTCCGATTCATGGTGA+TGG - chr2.3:22794074-22794093 MS.gene72446:CDS 45.0%
GTTGCAGAGTACGGATTTGT+TGG + chr2.3:22793906-22793925 None:intergenic 45.0%
TACGATGAAGCTCATCCAGA+AGG - chr2.3:22794911-22794930 MS.gene72446:CDS 45.0%
TGTCTCTCCATAGACCTCAT+CGG + chr2.3:22793838-22793857 None:intergenic 45.0%
TTAGAAGCCTGCAAGGTAAC+TGG - chr2.3:22793783-22793802 MS.gene72446:CDS 45.0%
TTGGTCGGAGAGAACAACAT+GGG - chr2.3:22794343-22794362 MS.gene72446:CDS 45.0%
TTTCCACGTGTTGTGATCAC+CGG + chr2.3:22793981-22794000 None:intergenic 45.0%
! CCAGCTTTTGTTGCAGAGTA+CGG + chr2.3:22793915-22793934 None:intergenic 45.0%
! CTTTTCCTTGCATTGCCAAG+AGG + chr2.3:22794055-22794074 None:intergenic 45.0%
! GCTTACCATTGCCTTGGTTT+TGG + chr2.3:22794993-22795012 None:intergenic 45.0%
! GTTCCACCTACAAAGAGCAT+TGG - chr2.3:22794551-22794570 MS.gene72446:CDS 45.0%
! TAGCTAGCTTACCATTGCCT+TGG + chr2.3:22794999-22795018 None:intergenic 45.0%
! TGGTAGGTCGTATGGATTAC+CGG - chr2.3:22793959-22793978 MS.gene72446:intron 45.0%
!! AGGTTCAGGCATTGGGTTTA+AGG - chr2.3:22794931-22794950 MS.gene72446:CDS 45.0%
!! ATATGGAAAAGGGCGTCTTG+AGG - chr2.3:22794676-22794695 MS.gene72446:CDS 45.0%
AAATGTCTCTCCATCCCACC+AGG + chr2.3:22794470-22794489 None:intergenic 50.0%
AACCCAATGCCTGAACCTTC+TGG + chr2.3:22794929-22794948 None:intergenic 50.0%
ACAGATGAGGATGCGGTTGT+TGG - chr2.3:22793855-22793874 MS.gene72446:CDS 50.0%
ACCATCCGTGTCAACGTTGT+TGG - chr2.3:22794812-22794831 MS.gene72446:CDS 50.0%
ATAGTTCCGGATAAGCCGGT+TGG + chr2.3:22793511-22793530 None:intergenic 50.0%
ATGGCGTATGGTAGGTCGTA+TGG - chr2.3:22793951-22793970 MS.gene72446:intron 50.0%
CATCCAGAAGGTTCAGGCAT+TGG - chr2.3:22794923-22794942 MS.gene72446:CDS 50.0%
CCATCCGTGTCAACGTTGTT+GGG - chr2.3:22794813-22794832 MS.gene72446:CDS 50.0%
CCGTACTCTGCAACAAAAGC+TGG - chr2.3:22793912-22793931 MS.gene72446:intron 50.0%
GAAGCTCATCCAGAAGGTTC+AGG - chr2.3:22794917-22794936 MS.gene72446:CDS 50.0%
GAGAATCTCGTTGTGGCTCA+CGG + chr2.3:22795415-22795434 None:intergenic 50.0%
GAGCCAATGCTCTTTGTAGG+TGG + chr2.3:22794557-22794576 None:intergenic 50.0%
GATCTGACCAGTTACCTTGC+AGG + chr2.3:22793793-22793812 None:intergenic 50.0%
GGTCTATGGAGAGACAGATG+AGG - chr2.3:22793842-22793861 MS.gene72446:CDS 50.0%
GTCCAACCTCTCCCTTATGA+AGG + chr2.3:22794157-22794176 None:intergenic 50.0%
GTTAATGATGCCTGGTGGGA+TGG - chr2.3:22794457-22794476 MS.gene72446:CDS 50.0%
GTTGGTCGGAGAGAACAACA+TGG - chr2.3:22794342-22794361 MS.gene72446:CDS 50.0%
TGAGGATCGTTCATCACTCG+TGG - chr2.3:22794694-22794713 MS.gene72446:CDS 50.0%
TGCTTGTCATGGCGTATGGT+AGG - chr2.3:22793943-22793962 MS.gene72446:intron 50.0%
TGGAGAGACAGATGAGGATG+CGG - chr2.3:22793848-22793867 MS.gene72446:CDS 50.0%
TGGGGCTGAAATGCTTGTCA+TGG - chr2.3:22793932-22793951 MS.gene72446:intron 50.0%
TTACCGGTGATCACAACACG+TGG - chr2.3:22793975-22793994 MS.gene72446:intron 50.0%
TTCAATGCAGCAGGTGTGAC+TGG - chr2.3:22794749-22794768 MS.gene72446:CDS 50.0%
TTGCGTCTCATGTTGCCAAC+CGG - chr2.3:22793493-22793512 MS.gene72446:CDS 50.0%
! AGACCTCATCGGTGCTTACA+TGG + chr2.3:22793827-22793846 None:intergenic 50.0%
! ATGTTGCCAACCGGCTTATC+CGG - chr2.3:22793502-22793521 MS.gene72446:CDS 50.0%
!! CATCCATGTAAGCACCGATG+AGG - chr2.3:22793821-22793840 MS.gene72446:CDS 50.0%
!! GTAAGCACCGATGAGGTCTA+TGG - chr2.3:22793828-22793847 MS.gene72446:CDS 50.0%
!! GTTGAAGGTGTTGGGTTGGT+CGG - chr2.3:22794328-22794347 MS.gene72446:CDS 50.0%
!! GTTGGATCGGTGGTTTGCTT+GGG - chr2.3:22794621-22794640 MS.gene72446:CDS 50.0%
AATTGGTGGGGCGATGTGAG+TGG - chr2.3:22794410-22794429 MS.gene72446:CDS 55.0%
ACTCACATCGCCCCACCAAT+TGG + chr2.3:22794411-22794430 None:intergenic 55.0%
CCCAACAACGTTGACACGGA+TGG + chr2.3:22794816-22794835 None:intergenic 55.0%
CGGGATAGTTCCGGATAAGC+CGG + chr2.3:22793515-22793534 None:intergenic 55.0%
CTCACATCGCCCCACCAATT+GGG + chr2.3:22794410-22794429 None:intergenic 55.0%
GAAGTAGCTGAGAAGCCTCG+TGG + chr2.3:22793884-22793903 None:intergenic 55.0%
TGCGGTTGTTGGAAACCACG+AGG - chr2.3:22793866-22793885 MS.gene72446:CDS 55.0%
! GGAAAGACTGGTTGGATCGG+TGG - chr2.3:22794611-22794630 MS.gene72446:CDS 55.0%
!! GGTTGGATCGGTGGTTTGCT+TGG - chr2.3:22794620-22794639 MS.gene72446:CDS 55.0%
ATCCAGCTGCCCCGGTAATG+AGG + chr2.3:22793470-22793489 None:intergenic 60.0%
ATCCTCATTACCGGGGCAGC+TGG - chr2.3:22793465-22793484 MS.gene72446:CDS 60.0%
CGCAATGAATCCAGCTGCCC+CGG + chr2.3:22793478-22793497 None:intergenic 60.0%
TCGTTGTGGCTCACGGCGCC+AGG + chr2.3:22795408-22795427 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 22793441 22795632 22793441 ID=MS.gene72446
chr2.3 mRNA 22793441 22795632 22793441 ID=MS.gene72446.t1;Parent=MS.gene72446
chr2.3 exon 22794067 22795632 22794067 ID=MS.gene72446.t1.exon1;Parent=MS.gene72446.t1
chr2.3 CDS 22794067 22795632 22794067 ID=cds.MS.gene72446.t1;Parent=MS.gene72446.t1
chr2.3 exon 22793441 22793887 22793441 ID=MS.gene72446.t1.exon2;Parent=MS.gene72446.t1
chr2.3 CDS 22793441 22793887 22793441 ID=cds.MS.gene72446.t1;Parent=MS.gene72446.t1
Gene Sequence

>MS.gene72446

ATGGCAACACACACCCCAAAAAACATCCTCATTACCGGGGCAGCTGGATTCATTGCGTCTCATGTTGCCAACCGGCTTATCCGGAACTATCCCGACTACAAAATTGTTGTCCTCGACAAACTCGATTACTGTTCTAATCTGAAGAACCTCATTCCTTCAAGATCATCTCCAAACTTCAAGTTTGTGAAGGGAGACATTGAAAGTGCTGACCTTGTCAACTACCTTCTCATCACTGAGTCTATCGATACAATTATGCACTTTGCTGCTCAAACTCATGTCGACAACTCTTTTGGTAACAGCTTTGAGTTCACCAAGAACAACATTTATGGTACTCATGTCTTATTAGAAGCCTGCAAGGTAACTGGTCAGATCAAAAGATTCATCCATGTAAGCACCGATGAGGTCTATGGAGAGACAGATGAGGATGCGGTTGTTGGAAACCACGAGGCTTCTCAGCTACTTCCAACAAATCCGTACTCTGCAACAAAAGCTGGGGCTGAAATGCTTGTCATGGCGTATGGTAGGTCGTATGGATTACCGGTGATCACAACACGTGGAAACAATGTCTATGGCCCGAACCAGTTTCCTGAAAAGTTGATTCCAAAATTTATCCTCTTGGCAATGCAAGGAAAAGTTCTTCCGATTCATGGTGATGGTTCAAATGTGAGGAGTTATTTGTATTGTGAAGATGTTGCAGAGGCTTTTGAAGTTATCCTTCATAAGGGAGAGGTTGGACATGTTTACAATATTGGAACTAAGAAGGAAAGGAGAGTTATTGATGTAGCCACCGATATTTGCAAACTCTTCTCAATTGATCCGGAGACTAGTATAAAATTTGTAGAGAACAGGCCGTTTAATGATCAGAGGTACTTTCTTGACGATCAAAAGTTGAAGGTGTTGGGTTGGTCGGAGAGAACAACATGGGAAGAAGGCTTGAAGAAAACCATGGACTGGTATATCAACAATCCCAATTGGTGGGGCGATGTGAGTGGTGCATTGCTTCCTCATCCGAAAATGTTAATGATGCCTGGTGGGATGGAGAGACATTTCAATGGGTCTGAAGAAGAAAATTCTGCACCGTTTGTCTCAAGTACTAATACTCGAATGGTGGTTCCACCTACAAAGAGCATTGGCTCTTCACAGAAACCTCCTCTCAAGTTCTTGATCTATGGAAAGACTGGTTGGATCGGTGGTTTGCTTGGGAAATTGTGCGAGAAACAAGGGATTCCATATGAATATGGAAAAGGGCGTCTTGAGGATCGTTCATCACTCGTGGCTGATATTCAGAACGTGAAGCCAACTCATATTTTCAATGCAGCAGGTGTGACTGGTAGACCTAATGTTGATTGGTGCGAATCTCATAAAACTGAAACCATCCGTGTCAACGTTGTTGGGACTTTAACATTGGCTGATGTAAGCAGAGAGCATAACCTTTTGATGATGAACTATGCTACCGGGTGCATATTCGAGTACGATGAAGCTCATCCAGAAGGTTCAGGCATTGGGTTTAAGGAAGAAGACACTCCTAATTTCGCCGGTTCTTTCTATTCCAAAACCAAGGCAATGGTAAGCTAGCTATAACACAATTTAAACTTTTCTTCCGTTTCCATTATGATTCCTTTTTTTTTGAAATCGAGGACACAATAGTATGAGCCTATTGAACAAATCTTGTTCAAGTAAGACCATTTCCATTATGATTATGAATATGAATATTTCTTAATAATTAATCTGTGAATGTTTCTCAGGTTGAAGAGCTTTTGAAAGACTATGACAATGTATGCACTCTAAGGGTTCGCATGCCGATTTCATCTGACCTAAGCAATCCACGCAATTTCATCACCAAGATTTCACGTTACAACAAGGTAGTCAACATTCCAAACAGCATGACAATTTTGGACGAACTTCTTCCTATTTCAATTGAGATGGCAAAGAGGAACTTAAGAGGTATCTGGAACTTCACAAATCCTGGCGCCGTGAGCCACAACGAGATTCTCGAGATGTACAGAGATTACATTGATCCAAACTTCAAGTGGGCTAACTTCACACTTGAAGAACAAGCCAAAGTGATAGTTGCTGCAAGAAGCAACAATGAAATGGATGCATCCAAATTGAAGAATGAGTTCCCAGAATTGCTTTCCATCAAAGAATCACTTATCAAGTACGTCTTTGAGCCAAACACGAAAAGTGCTTAA
Protein sequence

>MS.gene72446.t1

MATHTPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLIPSRSSPNFKFVKGDIESADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKVLPIHGDGSNVRSYLYCEDVAEAFEVILHKGEVGHVYNIGTKKERRVIDVATDICKLFSIDPETSIKFVENRPFNDQRYFLDDQKLKVLGWSERTTWEEGLKKTMDWYINNPNWWGDVSGALLPHPKMLMMPGGMERHFNGSEEENSAPFVSSTNTRMVVPPTKSIGSSQKPPLKFLIYGKTGWIGGLLGKLCEKQGIPYEYGKGRLEDRSSLVADIQNVKPTHIFNAAGVTGRPNVDWCESHKTETIRVNVVGTLTLADVSREHNLLMMNYATGCIFEYDEAHPEGSGIGFKEEDTPNFAGSFYSKTKAMVEELLKDYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGAVSHNEILEMYRDYIDPNFKWANFTLEEQAKVIVAARSNNEMDASKLKNEFPELLSIKESLIKYVFEPNTKSA