Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72607.t1 | XP_013452719.1 | 92.6 | 419 | 29 | 2 | 1 | 418 | 1 | 418 | 2.90E-207 | 731.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72607.t1 | Q9LVJ0 | 62.9 | 385 | 135 | 5 | 38 | 418 | 41 | 421 | 3.0e-120 | 433.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72607.t1 | A0A072UAR1 | 92.6 | 419 | 29 | 2 | 1 | 418 | 1 | 418 | 2.1e-207 | 731.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056405 | MS.gene72607 | 0.837255 | 5.79E-57 | -1.69E-46 |
| MS.gene056607 | MS.gene72607 | 0.84317 | 1.65E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72607.t1 | MTR_6g071465 | 94.033 | 419 | 23 | 2 | 1 | 418 | 1 | 418 | 0.0 | 780 |
| MS.gene72607.t1 | MTR_5g028020 | 43.839 | 422 | 217 | 11 | 1 | 416 | 1 | 408 | 3.10e-105 | 317 |
| MS.gene72607.t1 | MTR_8g012420 | 32.378 | 349 | 218 | 6 | 70 | 413 | 32 | 367 | 2.40e-54 | 185 |
| MS.gene72607.t1 | MTR_7g053530 | 29.805 | 359 | 208 | 9 | 66 | 413 | 12 | 337 | 1.13e-31 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72607.t1 | AT1G48450 | 65.027 | 366 | 114 | 5 | 63 | 418 | 62 | 423 | 6.76e-157 | 449 |
| MS.gene72607.t1 | AT3G17800 | 64.156 | 385 | 130 | 5 | 38 | 418 | 41 | 421 | 2.65e-151 | 435 |
| MS.gene72607.t1 | AT3G17800 | 67.598 | 358 | 108 | 5 | 65 | 418 | 74 | 427 | 6.60e-151 | 434 |
| MS.gene72607.t1 | AT1G32160 | 46.499 | 357 | 179 | 5 | 64 | 416 | 56 | 404 | 3.26e-103 | 312 |
| MS.gene72607.t1 | AT1G48450 | 65.086 | 232 | 70 | 4 | 63 | 287 | 62 | 289 | 6.79e-95 | 288 |
| MS.gene72607.t1 | AT1G48450 | 65.086 | 232 | 70 | 4 | 63 | 287 | 62 | 289 | 1.17e-94 | 288 |
| MS.gene72607.t1 | AT3G07310 | 34.930 | 355 | 186 | 6 | 69 | 418 | 42 | 356 | 6.89e-56 | 189 |
| MS.gene72607.t1 | AT3G07310 | 35.507 | 276 | 134 | 5 | 143 | 413 | 11 | 247 | 1.97e-46 | 160 |
| MS.gene72607.t1 | AT5G48590 | 34.819 | 359 | 164 | 9 | 63 | 413 | 32 | 328 | 6.73e-46 | 162 |
Find 101 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCCACTTGGCCCTACTTC+TGG | 0.226525 | 6.4:+48875366 | MS.gene72607:CDS |
| ATTGGTAGTGCAGAAATTTA+TGG | 0.229511 | 6.4:+48875222 | MS.gene72607:CDS |
| GCAGTTTCTCTCTCAGATTT+TGG | 0.245902 | 6.4:+48873062 | MS.gene72607:CDS |
| CTTACAAGACAGCGGTAAAT+TGG | 0.250136 | 6.4:-48871167 | None:intergenic |
| CCATTCCCTTGCTTGGAGTT+AGG | 0.259524 | 6.4:-48872919 | None:intergenic |
| TCTGGTGTTATAACAATTTC+CGG | 0.272174 | 6.4:-48875808 | None:intergenic |
| TCAAGCCAAGCAGGGACTTC+GGG | 0.273317 | 6.4:-48875622 | None:intergenic |
| AAAGAAAAGCCTTCTGCTTC+AGG | 0.311495 | 6.4:+48873165 | MS.gene72607:CDS |
| AATGATGCTGACGGCCTCTT+TGG | 0.326321 | 6.4:-48875755 | None:intergenic |
| CTTGAGAGTGGCATCAGTTC+TGG | 0.336332 | 6.4:+48875640 | MS.gene72607:CDS |
| GAAATCAGTTTAGGACAAAA+TGG | 0.347476 | 6.4:-48875960 | None:intergenic |
| CTACTTCTGGGTAACCGATC+AGG | 0.368634 | 6.4:+48875379 | MS.gene72607:CDS |
| TTGTTTCGTCTTCCAAAGTT+TGG | 0.370425 | 6.4:-48875558 | None:intergenic |
| TCCATAACGCCACATCCTTC+TGG | 0.373664 | 6.4:+48875268 | MS.gene72607:CDS |
| AATCATACTGAAGCATTGTT+TGG | 0.374610 | 6.4:+48875781 | MS.gene72607:CDS |
| CAATTTACCGCTGTCTTGTA+AGG | 0.374918 | 6.4:+48871168 | MS.gene72607:CDS |
| CTTCTGGTCAAGTTGATTCA+TGG | 0.375052 | 6.4:+48875284 | MS.gene72607:CDS |
| TCTCCTTCCATTCCCTTGCT+TGG | 0.396301 | 6.4:-48872926 | None:intergenic |
| GAAAACTATTAGCCAAACTT+TGG | 0.403655 | 6.4:+48875546 | MS.gene72607:CDS |
| ATCATCAAAATTAGCATTGG+TGG | 0.408519 | 6.4:+48875859 | MS.gene72607:CDS |
| TGAGAGAGAAACTGCCCTAC+TGG | 0.415392 | 6.4:-48873054 | None:intergenic |
| AAGCGAGACGGTAGATCTTC+CGG | 0.415877 | 6.4:-48871137 | None:intergenic |
| GTGGCTTTCGATCAACTCAT+AGG | 0.419342 | 6.4:-48875350 | None:intergenic |
| GAGTGAGCAGAAATCAGTTT+AGG | 0.422282 | 6.4:-48875969 | None:intergenic |
| ACCAGAAGGATGTGGCGTTA+TGG | 0.430448 | 6.4:-48875269 | None:intergenic |
| TCATCATCTGCAGAGTCATC+TGG | 0.430784 | 6.4:+48872994 | MS.gene72607:CDS |
| CAGGAGAATTGCTGAGGTAA+AGG | 0.440956 | 6.4:+48875159 | MS.gene72607:intron |
| CTCAAGCCAAGCAGGGACTT+CGG | 0.447735 | 6.4:-48875623 | None:intergenic |
| TGAAGCATTGTTTGGTAGAC+CGG | 0.453301 | 6.4:+48875789 | MS.gene72607:CDS |
| AGCCACTTGGCCCTACTTCT+GGG | 0.465078 | 6.4:+48875367 | MS.gene72607:CDS |
| GGCATCAGTTCTGGTGCAAA+TGG | 0.465642 | 6.4:+48875649 | MS.gene72607:CDS |
| ATGCCACTCTCAAGCCAAGC+AGG | 0.468609 | 6.4:-48875631 | None:intergenic |
| CCCACCCCGAAGTCCCTGCT+TGG | 0.469772 | 6.4:+48875617 | MS.gene72607:CDS |
| GATATCAAAGGACATCATAT+AGG | 0.470294 | 6.4:-48875701 | None:intergenic |
| CAGTTCTGGTGCAAATGGTC+AGG | 0.477762 | 6.4:+48875654 | MS.gene72607:CDS |
| ACTGGAGACTCGAGCTTTAG+TGG | 0.480349 | 6.4:-48873036 | None:intergenic |
| TAGCTCAGATCAGCAAACTA+AGG | 0.482150 | 6.4:+48875416 | MS.gene72607:CDS |
| TATGCTGCGTCAGTAATGTA+TGG | 0.487588 | 6.4:+48875451 | MS.gene72607:CDS |
| GATCTTCCGGCTAACATTGA+CGG | 0.491904 | 6.4:-48871124 | None:intergenic |
| GATTCATGGCCAAGCGAAGA+TGG | 0.496795 | 6.4:+48875298 | MS.gene72607:CDS |
| CCTAACTCCAAGCAAGGGAA+TGG | 0.504270 | 6.4:+48872919 | MS.gene72607:CDS |
| TAGTTTGCTGATCTGAGCTA+CGG | 0.504391 | 6.4:-48875413 | None:intergenic |
| ACGCACGGCGTTAAACTTAA+CGG | 0.505089 | 6.4:+48871066 | MS.gene72607:CDS |
| CATAACCATCACGATCAGAT+TGG | 0.507362 | 6.4:-48873137 | None:intergenic |
| GCTAACATTGACGGCTTACA+CGG | 0.511372 | 6.4:-48871115 | None:intergenic |
| TACTTCTGGGTAACCGATCA+GGG | 0.513490 | 6.4:+48875380 | MS.gene72607:CDS |
| TGTTGTCCAACGGTTCCAGC+TGG | 0.516143 | 6.4:+48875489 | MS.gene72607:CDS |
| TTCTCAAGCGTGTTGTCCAA+CGG | 0.524011 | 6.4:+48875479 | MS.gene72607:CDS |
| CAGCAAACTAAGGGTAGGAC+AGG | 0.526223 | 6.4:+48875426 | MS.gene72607:CDS |
| CTGATCGGTTACCCAGAAGT+AGG | 0.530654 | 6.4:-48875378 | None:intergenic |
| CCAAGCAGGGACTTCGGGGT+GGG | 0.541193 | 6.4:-48875617 | None:intergenic |
| CTGGAGACTCGAGCTTTAGT+GGG | 0.541450 | 6.4:-48873035 | None:intergenic |
| GAAATCATCAAAATTAGCAT+TGG | 0.542762 | 6.4:+48875856 | MS.gene72607:CDS |
| CTGAGGTAAAGGCGAAAGAG+AGG | 0.562909 | 6.4:+48875170 | MS.gene72607:CDS |
| GAAGACGAAACAAGAATCGC+TGG | 0.564276 | 6.4:+48875568 | MS.gene72607:CDS |
| CAAGCCAAGCAGGGACTTCG+GGG | 0.566373 | 6.4:-48875621 | None:intergenic |
| GCCAAGCAGGGACTTCGGGG+TGG | 0.570752 | 6.4:-48875618 | None:intergenic |
| AGATAACAGTGTCTAGGTTG+CGG | 0.571238 | 6.4:+48875677 | MS.gene72607:CDS |
| TGGAAGTAGAAGGGGTCTTG+TGG | 0.574441 | 6.4:+48872957 | MS.gene72607:CDS |
| GTCCCTGCTTGGCTTGAGAG+TGG | 0.575084 | 6.4:+48875628 | MS.gene72607:CDS |
| AGAAGGATGTGGCGTTATGG+AGG | 0.578345 | 6.4:-48875266 | None:intergenic |
| ACTCCAAGCAAGGGAATGGA+AGG | 0.580646 | 6.4:+48872923 | MS.gene72607:CDS |
| TGATCGGTTACCCAGAAGTA+GGG | 0.580969 | 6.4:-48875377 | None:intergenic |
| GGAGGGTACTAAAGAAACAT+TGG | 0.581684 | 6.4:-48875248 | None:intergenic |
| TCTGTACCTAACTCCAAGCA+AGG | 0.586167 | 6.4:+48872913 | MS.gene72607:CDS |
| GGGTGGGACATAACTTGAGA+AGG | 0.586260 | 6.4:-48875601 | None:intergenic |
| GAAATTGTTATAACACCAGA+GGG | 0.587177 | 6.4:+48875811 | MS.gene72607:CDS |
| CTAAAGCTCGAGTCTCCAGT+AGG | 0.590159 | 6.4:+48873039 | MS.gene72607:CDS |
| TGAGTTGATCGAAAGCCACT+TGG | 0.595615 | 6.4:+48875354 | MS.gene72607:CDS |
| CATGAATCAACTTGACCAGA+AGG | 0.595770 | 6.4:-48875283 | None:intergenic |
| TGTAAGCCGTCAATGTTAGC+CGG | 0.600217 | 6.4:+48871118 | MS.gene72607:CDS |
| TGCCACTCTCAAGCCAAGCA+GGG | 0.600263 | 6.4:-48875630 | None:intergenic |
| CTGTAATGTCTCGATATCAA+AGG | 0.601046 | 6.4:-48875713 | None:intergenic |
| GTCAGGAGATAACAGTGTCT+AGG | 0.602177 | 6.4:+48875671 | MS.gene72607:CDS |
| TCAACTTGACCAGAAGGATG+TGG | 0.603982 | 6.4:-48875277 | None:intergenic |
| AAGCGAAGATGGAAAACTTG+AGG | 0.605727 | 6.4:+48875309 | MS.gene72607:CDS |
| GGAAATTGTTATAACACCAG+AGG | 0.605883 | 6.4:+48875810 | MS.gene72607:CDS |
| TTACACGGCCGTGCAGATGA+CGG | 0.606348 | 6.4:-48871100 | None:intergenic |
| ATGATTCTCAATGATGCTGA+CGG | 0.610568 | 6.4:-48875764 | None:intergenic |
| TTGAGAGCTATGTTGACTCA+AGG | 0.611300 | 6.4:+48875935 | MS.gene72607:CDS |
| CAATTCCAATCTGATCGTGA+TGG | 0.611573 | 6.4:+48873132 | MS.gene72607:CDS |
| AAGTCAGTTCCTGAAGCAGA+AGG | 0.615870 | 6.4:-48873174 | None:intergenic |
| AGAAGAAATATTGTACACAT+TGG | 0.619936 | 6.4:+48875204 | MS.gene72607:CDS |
| TAAAGCTCGAGTCTCCAGTA+GGG | 0.620318 | 6.4:+48873040 | MS.gene72607:CDS |
| GAAGGATGTGGCGTTATGGA+GGG | 0.624843 | 6.4:-48875265 | None:intergenic |
| CAGATCAGCAAACTAAGGGT+AGG | 0.626934 | 6.4:+48875421 | MS.gene72607:CDS |
| AGCTCAGATCAGCAAACTAA+GGG | 0.627652 | 6.4:+48875417 | MS.gene72607:CDS |
| CTGTTCTTCCGTCATCTGCA+CGG | 0.634971 | 6.4:+48871092 | MS.gene72607:CDS |
| AAGACAGCGGTAAATTGGAA+CGG | 0.649614 | 6.4:-48871162 | None:intergenic |
| TACCCAGAAGTAGGGCCAAG+TGG | 0.658409 | 6.4:-48875369 | None:intergenic |
| ACTGCAGCAGACATGAGATG+TGG | 0.659084 | 6.4:-48873093 | None:intergenic |
| GAAAATGGAAGCGACACGCA+CGG | 0.660048 | 6.4:+48871051 | None:intergenic |
| CTGCAGCAGACATGAGATGT+GGG | 0.661921 | 6.4:-48873092 | None:intergenic |
| ACTTCTGGGTAACCGATCAG+GGG | 0.662088 | 6.4:+48875381 | MS.gene72607:CDS |
| TGCAACGATTAGATCCAAAG+AGG | 0.669949 | 6.4:+48875741 | MS.gene72607:CDS |
| GGTGGGACATAACTTGAGAA+GGG | 0.672914 | 6.4:-48875600 | None:intergenic |
| CTGTACCTAACTCCAAGCAA+GGG | 0.675862 | 6.4:+48872914 | MS.gene72607:CDS |
| TGGAGACTCGAGCTTTAGTG+GGG | 0.681767 | 6.4:-48873034 | None:intergenic |
| TTCGATACCTTACAAGACAG+CGG | 0.707235 | 6.4:-48871175 | None:intergenic |
| ATTGGAACGGAAAAGCGAGA+CGG | 0.711366 | 6.4:-48871149 | None:intergenic |
| AAATTGTTATAACACCAGAG+GGG | 0.801812 | 6.4:+48875812 | MS.gene72607:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACAATATCTTTTTTTTTTA+TGG | - | chr6.4:48874960-48874979 | None:intergenic | 10.0% |
| !!! | TATCTTTTTTCTTTTTTTTA+TGG | - | chr6.4:48874796-48874815 | None:intergenic | 10.0% |
| !!! | TGTTTTTTTTTTTTTAAAGA+AGG | - | chr6.4:48873633-48873652 | None:intergenic | 10.0% |
| !!! | TTTTTTTAAATATATCTTGT+TGG | + | chr6.4:48873552-48873571 | MS.gene72607:intron | 10.0% |
| !! | AACTATTAAAATCAACTAAA+AGG | - | chr6.4:48871714-48871695 | None:intergenic | 15.0% |
| !! | ATATTGCATTTATATTTGAT+TGG | + | chr6.4:48872756-48872775 | MS.gene72607:intron | 15.0% |
| !! | ATTAGTCAAATTTAGATAAA+AGG | + | chr6.4:48873285-48873304 | MS.gene72607:intron | 15.0% |
| !! | TATTCAAAATTAACAAACAA+AGG | - | chr6.4:48871375-48871394 | None:intergenic | 15.0% |
| !!! | AGATAATTTTTTATCTGATT+TGG | + | chr6.4:48873690-48873709 | MS.gene72607:intron | 15.0% |
| !!! | ATATTTTATTGATGTATTTG+TGG | + | chr6.4:48874747-48874766 | MS.gene72607:intron | 15.0% |
| !!! | GATAATTTTTTATCTGATTT+GGG | + | chr6.4:48873691-48873710 | MS.gene72607:intron | 15.0% |
| !!! | TAACATGTTTTATAATACTT+TGG | + | chr6.4:48872607-48872626 | MS.gene72607:intron | 15.0% |
| !!! | TTAGTTGATTTTAATAGTTT+AGG | - | chr6.4:48871694-48871713 | None:intergenic | 15.0% |
| !!! | TTTTCAATTCTCTATTTATT+AGG | + | chr6.4:48873795-48873814 | MS.gene72607:intron | 15.0% |
| !! | AAAGAATTACATCAATGATA+AGG | + | chr6.4:48874363-48874382 | MS.gene72607:intron | 20.0% |
| !! | AATAGAATACGTTAATTTAG+TGG | - | chr6.4:48872823-48872842 | None:intergenic | 20.0% |
| !! | AATGAAAATAATGCCTATAA+TGG | + | chr6.4:48873964-48873983 | MS.gene72607:intron | 20.0% |
| !! | AATTCATTTGAATGATGTAA+AGG | + | chr6.4:48871927-48871946 | MS.gene72607:intron | 20.0% |
| !! | ATATAAATGCAATATAGAAC+TGG | - | chr6.4:48872751-48872770 | None:intergenic | 20.0% |
| !! | CCAAAAATTAAAAAAAAGTG+AGG | + | chr6.4:48875103-48875122 | MS.gene72607:intron | 20.0% |
| !! | GAATTGAAAAGAAAAAAAGT+AGG | - | chr6.4:48873785-48873804 | None:intergenic | 20.0% |
| !! | TGTACACATATATATATACA+AGG | - | chr6.4:48873832-48873851 | None:intergenic | 20.0% |
| !! | TTATGGATTCAAACTAAATA+TGG | - | chr6.4:48874779-48874798 | None:intergenic | 20.0% |
| !! | TTATGGATTCAAACTAAATT+TGG | - | chr6.4:48874943-48874962 | None:intergenic | 20.0% |
| !! | TTATTAGCAATATTCCAAAA+AGG | - | chr6.4:48872016-48872035 | None:intergenic | 20.0% |
| !!! | ACAATTTTAGTGACTAAATT+CGG | + | chr6.4:48872245-48872264 | MS.gene72607:intron | 20.0% |
| !!! | ATATGTATGGGATTTTTTAT+TGG | + | chr6.4:48872395-48872414 | MS.gene72607:intron | 20.0% |
| !!! | ATTAAGCTTTTATCCATTAT+AGG | - | chr6.4:48873980-48873999 | None:intergenic | 20.0% |
| !!! | ATTTTAATACATGAGATTTG+AGG | + | chr6.4:48872840-48872859 | MS.gene72607:intron | 20.0% |
| !!! | CATTAGTAGTAATTTGTATT+CGG | + | chr6.4:48874137-48874156 | MS.gene72607:intron | 20.0% |
| !!! | CCTCACTTTTTTTTAATTTT+TGG | - | chr6.4:48875106-48875125 | None:intergenic | 20.0% |
| !!! | TACAAAATGTTTTTAATGAC+CGG | + | chr6.4:48874034-48874053 | MS.gene72607:intron | 20.0% |
| !!! | TCAAGTTTTATCTGTATTTT+GGG | + | chr6.4:48873727-48873746 | MS.gene72607:intron | 20.0% |
| !!! | TTCAAGTTTTATCTGTATTT+TGG | + | chr6.4:48873726-48873745 | MS.gene72607:intron | 20.0% |
| !!! | TTTATAATACTTTGGTTTTG+TGG | + | chr6.4:48872615-48872634 | MS.gene72607:intron | 20.0% |
| !!! | TTTTAATACATGAGATTTGA+GGG | + | chr6.4:48872841-48872860 | MS.gene72607:intron | 20.0% |
| !!! | TTTTGGAATATTGCTAATAA+GGG | + | chr6.4:48872016-48872035 | MS.gene72607:intron | 20.0% |
| !!! | TTTTTGGAATATTGCTAATA+AGG | + | chr6.4:48872015-48872034 | MS.gene72607:intron | 20.0% |
| ! | AACCACAAATGTGTTTATAT+AGG | + | chr6.4:48874251-48874270 | MS.gene72607:intron | 25.0% |
| ! | AACTGCTAATATGTTTATGT+AGG | - | chr6.4:48874202-48874221 | None:intergenic | 25.0% |
| ! | AGAAGAAATATTGTACACAT+TGG | + | chr6.4:48875204-48875223 | MS.gene72607:CDS | 25.0% |
| ! | AGTTATAAGACTTGAAATCA+TGG | - | chr6.4:48872305-48872324 | None:intergenic | 25.0% |
| ! | CTCAGATATAAGAACATATA+TGG | - | chr6.4:48873247-48873266 | None:intergenic | 25.0% |
| ! | GAAATCATCAAAATTAGCAT+TGG | + | chr6.4:48875856-48875875 | MS.gene72607:CDS | 25.0% |
| ! | GTCAACAGCTATAAAAATTT+GGG | - | chr6.4:48871599-48871618 | None:intergenic | 25.0% |
| ! | GTGTTTATTATAAGGTGTAT+CGG | + | chr6.4:48872210-48872229 | MS.gene72607:intron | 25.0% |
| ! | TAACTTAGCTACATATGTAT+GGG | + | chr6.4:48872383-48872402 | MS.gene72607:intron | 25.0% |
| ! | TAATAGTTTAGGAACCAAAT+TGG | - | chr6.4:48871683-48871702 | None:intergenic | 25.0% |
| ! | TAGCATACTTTATGTTGAAA+CGG | - | chr6.4:48872061-48872080 | None:intergenic | 25.0% |
| ! | TATATAAACACATTTGTGGT+TGG | - | chr6.4:48874252-48874271 | None:intergenic | 25.0% |
| ! | TGTCAACAGCTATAAAAATT+TGG | - | chr6.4:48871600-48871619 | None:intergenic | 25.0% |
| ! | TGTTGTATATAAACTTCTCT+TGG | + | chr6.4:48872165-48872184 | MS.gene72607:intron | 25.0% |
| ! | TTATATCGATGAATTTGATG+TGG | - | chr6.4:48873463-48873482 | None:intergenic | 25.0% |
| !! | ATAAACTGGTTTAAGGAATA+AGG | + | chr6.4:48871759-48871778 | MS.gene72607:intron | 25.0% |
| !! | ATGGATGAGAGTATAATTTA+AGG | - | chr6.4:48871721-48871740 | None:intergenic | 25.0% |
| !! | ATTTTACAAAGTAAAAGCTG+TGG | + | chr6.4:48874406-48874425 | MS.gene72607:intron | 25.0% |
| !! | ATTTTCTATTGGAAGTAGAA+GGG | + | chr6.4:48872948-48872967 | MS.gene72607:CDS | 25.0% |
| !! | GATTAACATTTTGCAATTCT+AGG | + | chr6.4:48871988-48872007 | MS.gene72607:intron | 25.0% |
| !! | TTGATAATAGATCAAGATAG+AGG | + | chr6.4:48871956-48871975 | MS.gene72607:intron | 25.0% |
| !! | TTTGGAATATTGCTAATAAG+GGG | + | chr6.4:48872017-48872036 | MS.gene72607:intron | 25.0% |
| !!! | AATTGTTTTAAGTCAGTGTT+TGG | + | chr6.4:48874650-48874669 | MS.gene72607:intron | 25.0% |
| !!! | TACTTTTGGTTCTTTTCTTT+GGG | + | chr6.4:48875909-48875928 | MS.gene72607:CDS | 25.0% |
| !!! | TATTGTTTTAAGTTAGCGTT+TGG | + | chr6.4:48874814-48874833 | MS.gene72607:intron | 25.0% |
| !!! | TTACTTTTGGTTCTTTTCTT+TGG | + | chr6.4:48875908-48875927 | MS.gene72607:CDS | 25.0% |
| AAATTGTTATAACACCAGAG+GGG | + | chr6.4:48875812-48875831 | MS.gene72607:CDS | 30.0% | |
| AAGACAAATATTTGATCCTG+TGG | + | chr6.4:48871407-48871426 | MS.gene72607:intron | 30.0% | |
| AGCCTATATAAACACATTTG+TGG | - | chr6.4:48874256-48874275 | None:intergenic | 30.0% | |
| ATAGGCTATTCTAACGTAAT+GGG | + | chr6.4:48874269-48874288 | MS.gene72607:intron | 30.0% | |
| ATCACTTAGAACCTCTTTAT+AGG | - | chr6.4:48874577-48874596 | None:intergenic | 30.0% | |
| ATGTACCTTTATCATATTGC+CGG | - | chr6.4:48874056-48874075 | None:intergenic | 30.0% | |
| ATGTAGCATCTATCAATCAA+TGG | - | chr6.4:48873323-48873342 | None:intergenic | 30.0% | |
| ATTTACTTGTTCCCATTTGA+AGG | + | chr6.4:48873366-48873385 | MS.gene72607:intron | 30.0% | |
| CAATGTGGGTGTTTATTATA+AGG | + | chr6.4:48872202-48872221 | MS.gene72607:intron | 30.0% | |
| CCTCTTTATAGGTAAAAGTA+AGG | - | chr6.4:48874566-48874585 | None:intergenic | 30.0% | |
| CTAACTTAGCTACATATGTA+TGG | + | chr6.4:48872382-48872401 | MS.gene72607:intron | 30.0% | |
| GAAAACTATTAGCCAAACTT+TGG | + | chr6.4:48875546-48875565 | MS.gene72607:CDS | 30.0% | |
| GAAATTGTTATAACACCAGA+GGG | + | chr6.4:48875811-48875830 | MS.gene72607:CDS | 30.0% | |
| GAATTGCATGTTGAAATTGA+TGG | + | chr6.4:48871330-48871349 | MS.gene72607:intron | 30.0% | |
| GATATCAAAGGACATCATAT+AGG | - | chr6.4:48875704-48875723 | None:intergenic | 30.0% | |
| GATATTGCTACTCGAATTAA+CGG | + | chr6.4:48871440-48871459 | MS.gene72607:intron | 30.0% | |
| GTAGGATAATCTAACCTAAT+TGG | - | chr6.4:48874184-48874203 | None:intergenic | 30.0% | |
| TAAACATATTAGCAGTTGAC+TGG | + | chr6.4:48874205-48874224 | MS.gene72607:intron | 30.0% | |
| TAGTTCAGAGACCAAAAAAT+TGG | + | chr6.4:48871833-48871852 | MS.gene72607:intron | 30.0% | |
| TATAGGCTATTCTAACGTAA+TGG | + | chr6.4:48874268-48874287 | MS.gene72607:intron | 30.0% | |
| TCACGATAAAATAATAGTGC+TGG | - | chr6.4:48873493-48873512 | None:intergenic | 30.0% | |
| TCCTTAAACCAGTTTATTGA+AGG | - | chr6.4:48871756-48871775 | None:intergenic | 30.0% | |
| TCTCTATTTATTAGGTAGTC+TGG | + | chr6.4:48873803-48873822 | MS.gene72607:intron | 30.0% | |
| TGTACTCTCATTCATCAATT+TGG | - | chr6.4:48871786-48871805 | None:intergenic | 30.0% | |
| ! | AATGGAAGGAGATTTTCTAT+TGG | + | chr6.4:48872937-48872956 | MS.gene72607:CDS | 30.0% |
| ! | ATCATCAAAATTAGCATTGG+TGG | + | chr6.4:48875859-48875878 | MS.gene72607:CDS | 30.0% |
| ! | CATCAATTGGTTTCACTTAA+TGG | + | chr6.4:48874485-48874504 | MS.gene72607:intron | 30.0% |
| ! | GATTTTCTATTGGAAGTAGA+AGG | + | chr6.4:48872947-48872966 | MS.gene72607:CDS | 30.0% |
| ! | GCAATTCTCCTGTAAAATTT+TGG | - | chr6.4:48875151-48875170 | None:intergenic | 30.0% |
| ! | GTCTTACTAAAGTACTAAGA+GGG | + | chr6.4:48874291-48874310 | MS.gene72607:intron | 30.0% |
| ! | TCCTTCAATAAACTGGTTTA+AGG | + | chr6.4:48871752-48871771 | MS.gene72607:intron | 30.0% |
| ! | TTCTCGATTGTGAAAAGTAT+TGG | - | chr6.4:48872429-48872448 | None:intergenic | 30.0% |
| ! | TTTTCTATTGGAAGTAGAAG+GGG | + | chr6.4:48872949-48872968 | MS.gene72607:CDS | 30.0% |
| ! | TTTTTATTGTCTTTTCCAGC+TGG | - | chr6.4:48875507-48875526 | None:intergenic | 30.0% |
| !! | AATCATACTGAAGCATTGTT+TGG | + | chr6.4:48875781-48875800 | MS.gene72607:CDS | 30.0% |
| !! | ATGAATGAGAGTACAGTTTT+AGG | + | chr6.4:48871791-48871810 | MS.gene72607:intron | 30.0% |
| !! | ATTGGTAGTGCAGAAATTTA+TGG | + | chr6.4:48875222-48875241 | MS.gene72607:CDS | 30.0% |
| !! | CCTTACTTTTACCTATAAAG+AGG | + | chr6.4:48874563-48874582 | MS.gene72607:intron | 30.0% |
| !! | TCTGGTGTTATAACAATTTC+CGG | - | chr6.4:48875811-48875830 | None:intergenic | 30.0% |
| !! | TTTTGCTTGCTGATTGTTTT+TGG | + | chr6.4:48872871-48872890 | MS.gene72607:intron | 30.0% |
| !!! | GTTTTAGAAGCTGTTACTTT+TGG | + | chr6.4:48875895-48875914 | MS.gene72607:CDS | 30.0% |
| AATAAACACCCACATTGTCT+GGG | - | chr6.4:48872199-48872218 | None:intergenic | 35.0% | |
| AATACATCATCAGCAAGGTT+TGG | - | chr6.4:48872475-48872494 | None:intergenic | 35.0% | |
| AATGACCGGCAATATGATAA+AGG | + | chr6.4:48874048-48874067 | MS.gene72607:intron | 35.0% | |
| AATGCACAATAAGTAGTCAG+TGG | + | chr6.4:48874705-48874724 | MS.gene72607:intron | 35.0% | |
| ACAGTGAGAGTGATAGTTTA+GGG | - | chr6.4:48871476-48871495 | None:intergenic | 35.0% | |
| ACTGAGAAGTTCACATCAAT+TGG | + | chr6.4:48874472-48874491 | MS.gene72607:intron | 35.0% | |
| ATCTGAACCATAAATACCCA+GGG | - | chr6.4:48873674-48873693 | None:intergenic | 35.0% | |
| ATGAGAGTCCTTCAATAAAC+TGG | + | chr6.4:48871745-48871764 | MS.gene72607:intron | 35.0% | |
| ATGATTCTCAATGATGCTGA+CGG | - | chr6.4:48875767-48875786 | None:intergenic | 35.0% | |
| ATTAGTGTCTCTCCTATTAG+TGG | + | chr6.4:48873413-48873432 | MS.gene72607:intron | 35.0% | |
| CCAAGATTCTACCTTCAAAT+GGG | - | chr6.4:48873380-48873399 | None:intergenic | 35.0% | |
| CGAATTTACAATCCACTCTA+GGG | - | chr6.4:48873937-48873956 | None:intergenic | 35.0% | |
| CTAATAGGAGAGACACTAAT+AGG | - | chr6.4:48873413-48873432 | None:intergenic | 35.0% | |
| CTGTAATGTCTCGATATCAA+AGG | - | chr6.4:48875716-48875735 | None:intergenic | 35.0% | |
| GGAAATTGTTATAACACCAG+AGG | + | chr6.4:48875810-48875829 | MS.gene72607:CDS | 35.0% | |
| GGCAAATTAGTTCATTGATC+AGG | + | chr6.4:48874158-48874177 | MS.gene72607:intron | 35.0% | |
| GTCAATCATCAAATGTTCAC+AGG | - | chr6.4:48872727-48872746 | None:intergenic | 35.0% | |
| TAATAAACACCCACATTGTC+TGG | - | chr6.4:48872200-48872219 | None:intergenic | 35.0% | |
| TATCTGAACCATAAATACCC+AGG | - | chr6.4:48873675-48873694 | None:intergenic | 35.0% | |
| TCATATCTCTCTCACCAATT+TGG | + | chr6.4:48871666-48871685 | MS.gene72607:intron | 35.0% | |
| TCGAATTTACAATCCACTCT+AGG | - | chr6.4:48873938-48873957 | None:intergenic | 35.0% | |
| TCTCAAATCAACTTTCACAC+AGG | - | chr6.4:48872691-48872710 | None:intergenic | 35.0% | |
| TTGAAGGACTCTCATATTGA+TGG | - | chr6.4:48871740-48871759 | None:intergenic | 35.0% | |
| TTGTTTCGTCTTCCAAAGTT+TGG | - | chr6.4:48875561-48875580 | None:intergenic | 35.0% | |
| ! | AAACCTTGCTGATGATGTAT+TGG | + | chr6.4:48872474-48872493 | MS.gene72607:intron | 35.0% |
| ! | ATAGTTTTCTCTTCTGCATC+AGG | - | chr6.4:48875535-48875554 | None:intergenic | 35.0% |
| ! | ATGATAAAAGACGCCTTGTT+GGG | + | chr6.4:48872128-48872147 | MS.gene72607:intron | 35.0% |
| ! | ATTTTACAGGAGAATTGCTG+AGG | + | chr6.4:48875153-48875172 | MS.gene72607:intron | 35.0% |
| ! | GAAGAATTAATTTTCCCCTC+TGG | - | chr6.4:48875829-48875848 | None:intergenic | 35.0% |
| ! | GATTGTGTTTGAAGTCTATC+AGG | + | chr6.4:48874006-48874025 | MS.gene72607:intron | 35.0% |
| ! | GCATGTTGAAATTGATGGTT+TGG | + | chr6.4:48871335-48871354 | MS.gene72607:intron | 35.0% |
| ! | GGTCTTACTAAAGTACTAAG+AGG | + | chr6.4:48874290-48874309 | MS.gene72607:intron | 35.0% |
| ! | TGACATCTAACTTGCATTCT+AGG | + | chr6.4:48873510-48873529 | MS.gene72607:intron | 35.0% |
| ! | TGATGATGTATTGGATGAAG+AGG | + | chr6.4:48872483-48872502 | MS.gene72607:intron | 35.0% |
| !! | GAGTGGATTGTAAATTCGAA+AGG | + | chr6.4:48873939-48873958 | MS.gene72607:intron | 35.0% |
| !! | TATGAGGTATTGTCCTCTTT+GGG | + | chr6.4:48872089-48872108 | MS.gene72607:intron | 35.0% |
| !! | TGCAATTCTAGGAACCTTTT+TGG | + | chr6.4:48871999-48872018 | MS.gene72607:intron | 35.0% |
| !! | TGTTTTAAGTCAGTGTTTGG+TGG | + | chr6.4:48874653-48874672 | MS.gene72607:intron | 35.0% |
| !! | TTATGAGGTATTGTCCTCTT+TGG | + | chr6.4:48872088-48872107 | MS.gene72607:intron | 35.0% |
| !!! | ATTTTGGAACCCAGCAAAAA+TGG | - | chr6.4:48875135-48875154 | None:intergenic | 35.0% |
| !!! | GAACTGACTTAGTTTTGTAC+AGG | + | chr6.4:48873187-48873206 | MS.gene72607:CDS | 35.0% |
| !!! | GACTTAGTTTTGTACAGGTT+TGG | + | chr6.4:48873192-48873211 | MS.gene72607:intron | 35.0% |
| !!! | TCACTCTCTCACCAATTTTT+TGG | - | chr6.4:48871847-48871866 | None:intergenic | 35.0% |
| !!! | TGTTTTAAGTTAGCGTTTGG+TGG | + | chr6.4:48874817-48874836 | MS.gene72607:intron | 35.0% |
| AAAGAAAAGCCTTCTGCTTC+AGG | + | chr6.4:48873165-48873184 | MS.gene72607:CDS | 40.0% | |
| AAAGCTATATGTCCCTAGAG+TGG | + | chr6.4:48873922-48873941 | MS.gene72607:intron | 40.0% | |
| AAGACAGCGGTAAATTGGAA+CGG | - | chr6.4:48871165-48871184 | None:intergenic | 40.0% | |
| AAGCGAAGATGGAAAACTTG+AGG | + | chr6.4:48875309-48875328 | MS.gene72607:CDS | 40.0% | |
| AAGTGCACATAGCCACTAAT+AGG | - | chr6.4:48873428-48873447 | None:intergenic | 40.0% | |
| AATATCCAAGCAAACTCCAC+AGG | - | chr6.4:48871426-48871445 | None:intergenic | 40.0% | |
| AGATAACAGTGTCTAGGTTG+CGG | + | chr6.4:48875677-48875696 | MS.gene72607:CDS | 40.0% | |
| AGCTCAGATCAGCAAACTAA+GGG | + | chr6.4:48875417-48875436 | MS.gene72607:CDS | 40.0% | |
| ATTGTCTTGACAAACAGCCA+TGG | + | chr6.4:48872783-48872802 | MS.gene72607:intron | 40.0% | |
| CAATTCCAATCTGATCGTGA+TGG | + | chr6.4:48873132-48873151 | MS.gene72607:CDS | 40.0% | |
| CAATTTACCGCTGTCTTGTA+AGG | + | chr6.4:48871168-48871187 | MS.gene72607:CDS | 40.0% | |
| CACAGTGAGAGTGATAGTTT+AGG | - | chr6.4:48871477-48871496 | None:intergenic | 40.0% | |
| CATAAATACCCAGGGGTTAA+AGG | - | chr6.4:48873666-48873685 | None:intergenic | 40.0% | |
| CATAACCATCACGATCAGAT+TGG | - | chr6.4:48873140-48873159 | None:intergenic | 40.0% | |
| CATCCAATACATCATCAGCA+AGG | - | chr6.4:48872480-48872499 | None:intergenic | 40.0% | |
| CATGAATCAACTTGACCAGA+AGG | - | chr6.4:48875286-48875305 | None:intergenic | 40.0% | |
| CATGATAAAAGACGCCTTGT+TGG | + | chr6.4:48872127-48872146 | MS.gene72607:intron | 40.0% | |
| CCCATTTGAAGGTAGAATCT+TGG | + | chr6.4:48873377-48873396 | MS.gene72607:intron | 40.0% | |
| CTTACAAGACAGCGGTAAAT+TGG | - | chr6.4:48871170-48871189 | None:intergenic | 40.0% | |
| CTTTAACCCCTGGGTATTTA+TGG | + | chr6.4:48873664-48873683 | MS.gene72607:intron | 40.0% | |
| GCCAAGATTCTACCTTCAAA+TGG | - | chr6.4:48873381-48873400 | None:intergenic | 40.0% | |
| GTAGCTAGTAACACAAGAGA+GGG | - | chr6.4:48873890-48873909 | None:intergenic | 40.0% | |
| GTTCATTGATCAGGCCAATT+AGG | + | chr6.4:48874167-48874186 | MS.gene72607:intron | 40.0% | |
| TAGCTCAGATCAGCAAACTA+AGG | + | chr6.4:48875416-48875435 | MS.gene72607:CDS | 40.0% | |
| TATGCTGCGTCAGTAATGTA+TGG | + | chr6.4:48875451-48875470 | MS.gene72607:CDS | 40.0% | |
| TCTGAACCATAAATACCCAG+GGG | - | chr6.4:48873673-48873692 | None:intergenic | 40.0% | |
| TGAAACATGAACACAGACAC+AGG | - | chr6.4:48871649-48871668 | None:intergenic | 40.0% | |
| TGCAACGATTAGATCCAAAG+AGG | + | chr6.4:48875741-48875760 | MS.gene72607:CDS | 40.0% | |
| TGTAGCTAGTAACACAAGAG+AGG | - | chr6.4:48873891-48873910 | None:intergenic | 40.0% | |
| TTATCATGGACAAAACCGTG+AGG | - | chr6.4:48872115-48872134 | None:intergenic | 40.0% | |
| TTCGATACCTTACAAGACAG+CGG | - | chr6.4:48871178-48871197 | None:intergenic | 40.0% | |
| ! | GCAGTTTCTCTCTCAGATTT+TGG | + | chr6.4:48873062-48873081 | MS.gene72607:CDS | 40.0% |
| ! | GCTGGGTTCCAAAATTTTAC+AGG | + | chr6.4:48875140-48875159 | MS.gene72607:intron | 40.0% |
| ! | TCAAGTTTTCCATCTTCGCT+TGG | - | chr6.4:48875310-48875329 | None:intergenic | 40.0% |
| ! | TGTATTGACCTTTAACCCCT+GGG | + | chr6.4:48873655-48873674 | MS.gene72607:intron | 40.0% |
| !! | CAACAAGGCGTCTTTTATCA+TGG | - | chr6.4:48872129-48872148 | None:intergenic | 40.0% |
| !! | CTTCTGGTCAAGTTGATTCA+TGG | + | chr6.4:48875284-48875303 | MS.gene72607:CDS | 40.0% |
| !! | GCAAGGTTTGGATTAGTTTC+AGG | - | chr6.4:48872463-48872482 | None:intergenic | 40.0% |
| !! | GCACTGACACTTTTGATTGA+AGG | + | chr6.4:48871499-48871518 | MS.gene72607:intron | 40.0% |
| !! | GGAGGGTACTAAAGAAACAT+TGG | - | chr6.4:48875251-48875270 | None:intergenic | 40.0% |
| !! | TAGTTTGCTGATCTGAGCTA+CGG | - | chr6.4:48875416-48875435 | None:intergenic | 40.0% |
| !! | TGAAGCATTGTTTGGTAGAC+CGG | + | chr6.4:48875789-48875808 | MS.gene72607:CDS | 40.0% |
| !! | TTGAGAGCTATGTTGACTCA+AGG | + | chr6.4:48875935-48875954 | MS.gene72607:CDS | 40.0% |
| !!! | TGCTGATTGTTTTTGGTGGT+TGG | + | chr6.4:48872878-48872897 | MS.gene72607:intron | 40.0% |
| !!! | TGCTTGCTGATTGTTTTTGG+TGG | + | chr6.4:48872874-48872893 | MS.gene72607:intron | 40.0% |
| AAGTCAGTTCCTGAAGCAGA+AGG | - | chr6.4:48873177-48873196 | None:intergenic | 45.0% | |
| ACGCACGGCGTTAAACTTAA+CGG | + | chr6.4:48871066-48871085 | MS.gene72607:CDS | 45.0% | |
| ATTGGAACGGAAAAGCGAGA+CGG | - | chr6.4:48871152-48871171 | None:intergenic | 45.0% | |
| CAGATCAGCAAACTAAGGGT+AGG | + | chr6.4:48875421-48875440 | MS.gene72607:CDS | 45.0% | |
| CAGGAGAATTGCTGAGGTAA+AGG | + | chr6.4:48875159-48875178 | MS.gene72607:intron | 45.0% | |
| CCTCAATTCCCAGACAATGT+GGG | + | chr6.4:48872188-48872207 | MS.gene72607:intron | 45.0% | |
| CTGTACCTAACTCCAAGCAA+GGG | + | chr6.4:48872914-48872933 | MS.gene72607:CDS | 45.0% | |
| GAAGACGAAACAAGAATCGC+TGG | + | chr6.4:48875568-48875587 | MS.gene72607:CDS | 45.0% | |
| GAGGACAATACCTCATAACG+TGG | - | chr6.4:48872086-48872105 | None:intergenic | 45.0% | |
| GATCTTCCGGCTAACATTGA+CGG | - | chr6.4:48871127-48871146 | None:intergenic | 45.0% | |
| GCTAACATTGACGGCTTACA+CGG | - | chr6.4:48871118-48871137 | None:intergenic | 45.0% | |
| GGTGAGAGAGTGATGCTTTA+GGG | + | chr6.4:48871854-48871873 | MS.gene72607:intron | 45.0% | |
| GGTGGGACATAACTTGAGAA+GGG | - | chr6.4:48875603-48875622 | None:intergenic | 45.0% | |
| GTATGCTACACCACGTTATG+AGG | + | chr6.4:48872073-48872092 | MS.gene72607:intron | 45.0% | |
| GTCAGGAGATAACAGTGTCT+AGG | + | chr6.4:48875671-48875690 | MS.gene72607:CDS | 45.0% | |
| GTGGCTTTCGATCAACTCAT+AGG | - | chr6.4:48875353-48875372 | None:intergenic | 45.0% | |
| TAAAGCTCGAGTCTCCAGTA+GGG | + | chr6.4:48873040-48873059 | MS.gene72607:CDS | 45.0% | |
| TACTTCTGGGTAACCGATCA+GGG | + | chr6.4:48875380-48875399 | MS.gene72607:CDS | 45.0% | |
| TCAACTTGACCAGAAGGATG+TGG | - | chr6.4:48875280-48875299 | None:intergenic | 45.0% | |
| TCATCATCTGCAGAGTCATC+TGG | + | chr6.4:48872994-48873013 | MS.gene72607:CDS | 45.0% | |
| TCTGTACCTAACTCCAAGCA+AGG | + | chr6.4:48872913-48872932 | MS.gene72607:CDS | 45.0% | |
| TGATCGGTTACCCAGAAGTA+GGG | - | chr6.4:48875380-48875399 | None:intergenic | 45.0% | |
| TGCTTGCTTGATACGAGAAC+AGG | + | chr6.4:48872557-48872576 | MS.gene72607:intron | 45.0% | |
| TGGTGAGAGAGTGATGCTTT+AGG | + | chr6.4:48871853-48871872 | MS.gene72607:intron | 45.0% | |
| TGTAAGCCGTCAATGTTAGC+CGG | + | chr6.4:48871118-48871137 | MS.gene72607:CDS | 45.0% | |
| TTCTCAAGCGTGTTGTCCAA+CGG | + | chr6.4:48875479-48875498 | MS.gene72607:CDS | 45.0% | |
| ! | CGGATTTTGAATCCCCTGAT+CGG | - | chr6.4:48875396-48875415 | None:intergenic | 45.0% |
| ! | CTGTATTGACCTTTAACCCC+TGG | + | chr6.4:48873654-48873673 | MS.gene72607:intron | 45.0% |
| ! | TGGAAGCACAATGAACACCA+TGG | - | chr6.4:48872803-48872822 | None:intergenic | 45.0% |
| ! | TTGATCCTGTGGAGTTTGCT+TGG | + | chr6.4:48871418-48871437 | MS.gene72607:intron | 45.0% |
| !! | TGAGTTGATCGAAAGCCACT+TGG | + | chr6.4:48875354-48875373 | MS.gene72607:CDS | 45.0% |
| !!! | AGGTGCTGACCATTTTTGCT+GGG | + | chr6.4:48875123-48875142 | MS.gene72607:intron | 45.0% |
| AAGCGAGACGGTAGATCTTC+CGG | - | chr6.4:48871140-48871159 | None:intergenic | 50.0% | |
| AATGATGCTGACGGCCTCTT+TGG | - | chr6.4:48875758-48875777 | None:intergenic | 50.0% | |
| ACCAGAAGGATGTGGCGTTA+TGG | - | chr6.4:48875272-48875291 | None:intergenic | 50.0% | |
| ACTCCAAGCAAGGGAATGGA+AGG | + | chr6.4:48872923-48872942 | MS.gene72607:CDS | 50.0% | |
| ACTGCAGCAGACATGAGATG+TGG | - | chr6.4:48873096-48873115 | None:intergenic | 50.0% | |
| ACTTCTGGGTAACCGATCAG+GGG | + | chr6.4:48875381-48875400 | MS.gene72607:CDS | 50.0% | |
| AGAAGGATGTGGCGTTATGG+AGG | - | chr6.4:48875269-48875288 | None:intergenic | 50.0% | |
| ATTGTCCTCTTTGGGCCTCA+CGG | + | chr6.4:48872097-48872116 | MS.gene72607:intron | 50.0% | |
| CAGCAAACTAAGGGTAGGAC+AGG | + | chr6.4:48875426-48875445 | MS.gene72607:CDS | 50.0% | |
| CCATTCCCTTGCTTGGAGTT+AGG | - | chr6.4:48872922-48872941 | None:intergenic | 50.0% | |
| CCCACATTGTCTGGGAATTG+AGG | - | chr6.4:48872191-48872210 | None:intergenic | 50.0% | |
| CCTAACTCCAAGCAAGGGAA+TGG | + | chr6.4:48872919-48872938 | MS.gene72607:CDS | 50.0% | |
| CTAAAGCTCGAGTCTCCAGT+AGG | + | chr6.4:48873039-48873058 | MS.gene72607:CDS | 50.0% | |
| CTACTTCTGGGTAACCGATC+AGG | + | chr6.4:48875379-48875398 | MS.gene72607:CDS | 50.0% | |
| CTGAGGTAAAGGCGAAAGAG+AGG | + | chr6.4:48875170-48875189 | MS.gene72607:CDS | 50.0% | |
| CTGATCGGTTACCCAGAAGT+AGG | - | chr6.4:48875381-48875400 | None:intergenic | 50.0% | |
| CTGCAGCAGACATGAGATGT+GGG | - | chr6.4:48873095-48873114 | None:intergenic | 50.0% | |
| CTGTTCTTCCGTCATCTGCA+CGG | + | chr6.4:48871092-48871111 | MS.gene72607:CDS | 50.0% | |
| CTTGAGAGTGGCATCAGTTC+TGG | + | chr6.4:48875640-48875659 | MS.gene72607:CDS | 50.0% | |
| GAAGGATGTGGCGTTATGGA+GGG | - | chr6.4:48875268-48875287 | None:intergenic | 50.0% | |
| GATTCATGGCCAAGCGAAGA+TGG | + | chr6.4:48875298-48875317 | MS.gene72607:CDS | 50.0% | |
| GCCTCAATTCCCAGACAATG+TGG | + | chr6.4:48872187-48872206 | MS.gene72607:intron | 50.0% | |
| GGGTGGGACATAACTTGAGA+AGG | - | chr6.4:48875604-48875623 | None:intergenic | 50.0% | |
| TCCATAACGCCACATCCTTC+TGG | + | chr6.4:48875268-48875287 | MS.gene72607:CDS | 50.0% | |
| TCTCCTTCCATTCCCTTGCT+TGG | - | chr6.4:48872929-48872948 | None:intergenic | 50.0% | |
| TGAGAGAGAAACTGCCCTAC+TGG | - | chr6.4:48873057-48873076 | None:intergenic | 50.0% | |
| TGGAAGTAGAAGGGGTCTTG+TGG | + | chr6.4:48872957-48872976 | MS.gene72607:CDS | 50.0% | |
| TGTCTGACAACGACACGAGA+CGG | + | chr6.4:48871541-48871560 | MS.gene72607:intron | 50.0% | |
| ! | AAAGACGCCTTGTTGGGTTG+AGG | + | chr6.4:48872134-48872153 | MS.gene72607:intron | 50.0% |
| ! | ACTGGAGACTCGAGCTTTAG+TGG | - | chr6.4:48873039-48873058 | None:intergenic | 50.0% |
| ! | CAGTTCTGGTGCAAATGGTC+AGG | + | chr6.4:48875654-48875673 | MS.gene72607:CDS | 50.0% |
| ! | CTGGAGACTCGAGCTTTAGT+GGG | - | chr6.4:48873038-48873057 | None:intergenic | 50.0% |
| ! | GGCATCAGTTCTGGTGCAAA+TGG | + | chr6.4:48875649-48875668 | MS.gene72607:CDS | 50.0% |
| ! | TCTTTTCCAGCTGGAACCGT+TGG | - | chr6.4:48875498-48875517 | None:intergenic | 50.0% |
| ! | TGGAGACTCGAGCTTTAGTG+GGG | - | chr6.4:48873037-48873056 | None:intergenic | 50.0% |
| !!! | GAGGTGCTGACCATTTTTGC+TGG | + | chr6.4:48875122-48875141 | MS.gene72607:intron | 50.0% |
| AAGCCACTTGGCCCTACTTC+TGG | + | chr6.4:48875366-48875385 | MS.gene72607:CDS | 55.0% | |
| AGCCACTTGGCCCTACTTCT+GGG | + | chr6.4:48875367-48875386 | MS.gene72607:CDS | 55.0% | |
| ATGCCACTCTCAAGCCAAGC+AGG | - | chr6.4:48875634-48875653 | None:intergenic | 55.0% | |
| CAAAACCGTGAGGCCCAAAG+AGG | - | chr6.4:48872105-48872124 | None:intergenic | 55.0% | |
| CTCAAGCCAAGCAGGGACTT+CGG | - | chr6.4:48875626-48875645 | None:intergenic | 55.0% | |
| TACCCAGAAGTAGGGCCAAG+TGG | - | chr6.4:48875372-48875391 | None:intergenic | 55.0% | |
| TCAAGCCAAGCAGGGACTTC+GGG | - | chr6.4:48875625-48875644 | None:intergenic | 55.0% | |
| TGCCACTCTCAAGCCAAGCA+GGG | - | chr6.4:48875633-48875652 | None:intergenic | 55.0% | |
| TGTTGTCCAACGGTTCCAGC+TGG | + | chr6.4:48875489-48875508 | MS.gene72607:CDS | 55.0% | |
| TTACACGGCCGTGCAGATGA+CGG | - | chr6.4:48871103-48871122 | None:intergenic | 55.0% | |
| !! | CTTGTTGGGTTGAGGAGCGT+GGG | + | chr6.4:48872142-48872161 | MS.gene72607:intron | 55.0% |
| CAAGCCAAGCAGGGACTTCG+GGG | - | chr6.4:48875624-48875643 | None:intergenic | 60.0% | |
| CCACGCTCCTCAACCCAACA+AGG | - | chr6.4:48872144-48872163 | None:intergenic | 60.0% | |
| ! | GTCCCTGCTTGGCTTGAGAG+TGG | + | chr6.4:48875628-48875647 | MS.gene72607:CDS | 60.0% |
| !! | CCTTGTTGGGTTGAGGAGCG+TGG | + | chr6.4:48872141-48872160 | MS.gene72607:intron | 60.0% |
| CCAAGCAGGGACTTCGGGGT+GGG | - | chr6.4:48875620-48875639 | None:intergenic | 65.0% | |
| CCCACCCCGAAGTCCCTGCT+TGG | + | chr6.4:48875617-48875636 | MS.gene72607:CDS | 70.0% | |
| GCCAAGCAGGGACTTCGGGG+TGG | - | chr6.4:48875621-48875640 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 48871055 | 48875978 | 48871055 | ID=MS.gene72607 |
| chr6.4 | mRNA | 48871055 | 48875978 | 48871055 | ID=MS.gene72607.t1;Parent=MS.gene72607 |
| chr6.4 | exon | 48871055 | 48871189 | 48871055 | ID=MS.gene72607.t1.exon1;Parent=MS.gene72607.t1 |
| chr6.4 | CDS | 48871055 | 48871189 | 48871055 | ID=cds.MS.gene72607.t1;Parent=MS.gene72607.t1 |
| chr6.4 | exon | 48872904 | 48873208 | 48872904 | ID=MS.gene72607.t1.exon2;Parent=MS.gene72607.t1 |
| chr6.4 | CDS | 48872904 | 48873208 | 48872904 | ID=cds.MS.gene72607.t1;Parent=MS.gene72607.t1 |
| chr6.4 | exon | 48875162 | 48875978 | 48875162 | ID=MS.gene72607.t1.exon3;Parent=MS.gene72607.t1 |
| chr6.4 | CDS | 48875162 | 48875978 | 48875162 | ID=cds.MS.gene72607.t1;Parent=MS.gene72607.t1 |
| Gene Sequence |
| Protein sequence |
