Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72657.t1 | XP_003612367.1 | 95.4 | 847 | 37 | 2 | 1 | 846 | 1 | 846 | 0.00E+00 | 1566.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72657.t1 | G7K186 | 95.4 | 847 | 37 | 2 | 1 | 846 | 1 | 846 | 0.0e+00 | 1566.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051541 | MS.gene72657 | 0.835886 | 1.29E-56 | -1.69E-46 |
| MS.gene055864 | MS.gene72657 | 0.803715 | 3.05E-49 | -1.69E-46 |
| MS.gene058429 | MS.gene72657 | 0.820968 | 5.18E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene72657 | 0.834191 | 3.46E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72657.t1 | MTR_5g024240 | 96.930 | 847 | 24 | 2 | 1 | 846 | 1 | 846 | 0.0 | 1681 |
| MS.gene72657.t1 | MTR_5g025350 | 73.200 | 250 | 35 | 3 | 453 | 696 | 12 | 235 | 5.11e-113 | 345 |
| MS.gene72657.t1 | MTR_5g025380 | 74.453 | 137 | 19 | 2 | 615 | 750 | 5 | 126 | 8.80e-56 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72657.t1 | AT2G17550 | 41.667 | 876 | 378 | 32 | 1 | 845 | 1 | 774 | 2.03e-167 | 505 |
| MS.gene72657.t1 | AT2G17550 | 42.020 | 802 | 333 | 31 | 74 | 845 | 1 | 700 | 8.58e-152 | 462 |
Find 143 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCAGACTCAGACGGTTTC+TGG | 0.172392 | 5.4:-15682218 | None:intergenic |
| CTGGTTTATACTTTGGTTCT+TGG | 0.181940 | 5.4:+15682295 | MS.gene72657:CDS |
| CTTGTGAGCATGAACTTTCT+TGG | 0.201477 | 5.4:-15679018 | None:intergenic |
| TAAAAGAATAAGTGAAAATA+TGG | 0.225343 | 5.4:+15680021 | MS.gene72657:CDS |
| GATGGATGGAGCCGGAATTT+TGG | 0.234500 | 5.4:+15680169 | MS.gene72657:CDS |
| GAATCACTTTCAGTTGTTCT+TGG | 0.245622 | 5.4:+15682483 | MS.gene72657:CDS |
| GTTATAAGATTTGATCATTA+AGG | 0.248170 | 5.4:-15680437 | None:intergenic |
| CTTACCGGTAATTCTCCTTC+TGG | 0.270394 | 5.4:-15679349 | None:intergenic |
| AGGAACTGTTGAAGTTAGTA+TGG | 0.285855 | 5.4:+15682577 | MS.gene72657:CDS |
| AGAGATTTACTTGTTGCTTC+TGG | 0.294038 | 5.4:+15682276 | MS.gene72657:CDS |
| GCTAGAAACACTTCCGATTT+CGG | 0.300734 | 5.4:-15680296 | None:intergenic |
| GCCTTTGTTCTCCAAAATTC+CGG | 0.301116 | 5.4:-15680180 | None:intergenic |
| TGGAATAAGTCTTTGTTAAG+AGG | 0.301570 | 5.4:+15682315 | MS.gene72657:CDS |
| TGAATCTCTACTGATAAATT+CGG | 0.305013 | 5.4:-15680836 | None:intergenic |
| AAATACAAACAGGATCTTTC+AGG | 0.313229 | 5.4:+15681001 | MS.gene72657:CDS |
| AGCAAAACTGTATCTCAAAT+TGG | 0.317168 | 5.4:-15681262 | None:intergenic |
| GCAGTGTTCATGAAGACTTT+TGG | 0.334930 | 5.4:+15681842 | MS.gene72657:CDS |
| ATTTGACGAGCAATAAGTTT+AGG | 0.338979 | 5.4:-15680703 | None:intergenic |
| CAATGAAGAGATCAATATAT+TGG | 0.342843 | 5.4:+15682704 | MS.gene72657:CDS |
| ATATCAAGCAGCAAGGTTTC+AGG | 0.359927 | 5.4:+15680258 | MS.gene72657:CDS |
| GACATCAGCTCTGGTTTAAC+TGG | 0.360505 | 5.4:+15681946 | MS.gene72657:CDS |
| CTTAGAGTTCTGCTCTTTGA+AGG | 0.378221 | 5.4:-15680397 | None:intergenic |
| TCAAGATCAGGAACATCATT+TGG | 0.380795 | 5.4:+15681105 | MS.gene72657:CDS |
| ATGGAAGGAGTTCAGTTAGT+TGG | 0.381437 | 5.4:+15680071 | MS.gene72657:CDS |
| TGTTCAAAGTTTGCCGAAAT+CGG | 0.382797 | 5.4:+15680283 | MS.gene72657:CDS |
| GTTGCTTCTGGTTTATACTT+TGG | 0.384654 | 5.4:+15682288 | MS.gene72657:CDS |
| TATTCAATCATGAAGAGAAT+TGG | 0.394633 | 5.4:+15680518 | MS.gene72657:CDS |
| GATACATATGCAAAGCCTAT+TGG | 0.399418 | 5.4:+15682339 | MS.gene72657:CDS |
| GAATCTCTACTGATAAATTC+GGG | 0.401716 | 5.4:-15680835 | None:intergenic |
| GAGAATTGGACTAGTTCAAC+AGG | 0.404604 | 5.4:+15680532 | MS.gene72657:CDS |
| GAAATGAATCGAATTCAATA+TGG | 0.405359 | 5.4:-15680120 | None:intergenic |
| TTGAGTTCAATCCCTTGGTC+TGG | 0.405396 | 5.4:+15682675 | MS.gene72657:CDS |
| AAGCCTTGTGGCAAGGTTGA+TGG | 0.415899 | 5.4:+15679952 | MS.gene72657:CDS |
| TCTTTATTCACTTGATACTT+TGG | 0.416705 | 5.4:+15682641 | MS.gene72657:CDS |
| AACATTTGAGTTCAATCCCT+TGG | 0.418429 | 5.4:+15682670 | MS.gene72657:CDS |
| TGGAAGGAGTTCAGTTAGTT+GGG | 0.424198 | 5.4:+15680072 | MS.gene72657:CDS |
| TCGTCTCTTGAGGACAAATC+AGG | 0.438083 | 5.4:-15681898 | None:intergenic |
| CGGCCCAGAAGGAGAATTAC+CGG | 0.440212 | 5.4:+15679345 | MS.gene72657:CDS |
| AGCCTTGTGGCAAGGTTGAT+GGG | 0.441746 | 5.4:+15679953 | MS.gene72657:CDS |
| GACAAATCAGGAGTTGATAC+TGG | 0.442829 | 5.4:-15681886 | None:intergenic |
| ATCAACCTTGCCACAAGGCT+TGG | 0.445266 | 5.4:-15679950 | None:intergenic |
| GATGTTCCTGATCTTGATAC+AGG | 0.455850 | 5.4:-15681099 | None:intergenic |
| TTACCGGTAATTCTCCTTCT+GGG | 0.456724 | 5.4:-15679348 | None:intergenic |
| CAACCGCTTCAAGCTTCCTC+CGG | 0.459478 | 5.4:-15681173 | None:intergenic |
| AAGGATCTTACAAGGTTCCT+TGG | 0.460932 | 5.4:-15681069 | None:intergenic |
| GATCAATATATTGGAAAGAG+AGG | 0.461233 | 5.4:+15682713 | MS.gene72657:CDS |
| AAAAGAATAAGTGAAAATAT+GGG | 0.462177 | 5.4:+15680022 | MS.gene72657:CDS |
| TCATGATTGAATATGCAATC+AGG | 0.468328 | 5.4:-15680508 | None:intergenic |
| CTGATAAATTCGGGGACACT+TGG | 0.469625 | 5.4:-15680826 | None:intergenic |
| TCGGGAACATCCACAGGAAA+AGG | 0.478838 | 5.4:+15680204 | MS.gene72657:CDS |
| TTTGAAATGTGCAGATGAAT+GGG | 0.480380 | 5.4:+15680957 | MS.gene72657:CDS |
| TTGCCGTGTGCTTGATCGAT+TGG | 0.481420 | 5.4:-15679921 | None:intergenic |
| GAAGAAACAGAAATACAAAC+AGG | 0.481676 | 5.4:+15680991 | MS.gene72657:CDS |
| TCTGCTCCTGTATCAAGATC+AGG | 0.482542 | 5.4:+15681093 | MS.gene72657:CDS |
| GGAATAAGTCTTTGTTAAGA+GGG | 0.490427 | 5.4:+15682316 | MS.gene72657:CDS |
| AATTTATCAGTAGAGATTCA+AGG | 0.492213 | 5.4:+15680839 | MS.gene72657:CDS |
| AGTTCAACAGGGACTTTACC+AGG | 0.494157 | 5.4:+15680544 | MS.gene72657:CDS |
| CTTGTAATATCTCTCATTGT+CGG | 0.494394 | 5.4:-15681351 | None:intergenic |
| GAAACCGTCTGAGTCTGAAT+TGG | 0.496615 | 5.4:+15682221 | MS.gene72657:CDS |
| TCTCTTATGTAAGATTCTGC+TGG | 0.500088 | 5.4:-15682258 | None:intergenic |
| CAGGTTTCAAGATAACGATC+CGG | 0.509636 | 5.4:-15680483 | None:intergenic |
| CTTCCTCCGGATATGAGCCC+CGG | 0.510820 | 5.4:-15681160 | None:intergenic |
| GCAACAGGTTTAGTGTCTAC+AGG | 0.513735 | 5.4:-15679989 | None:intergenic |
| AGGTTTCAAGATAACGATCC+GGG | 0.519687 | 5.4:-15680482 | None:intergenic |
| TCCATGTTGTCGCCGCCTCA+AGG | 0.519717 | 5.4:+15682552 | MS.gene72657:CDS |
| AACAGTTCCTTTCCTTGAGG+CGG | 0.522924 | 5.4:-15682564 | None:intergenic |
| GCAATAAGTTTAGGATCAGA+TGG | 0.523659 | 5.4:-15680694 | None:intergenic |
| GAATGATGAAAATTCTATGA+AGG | 0.523675 | 5.4:+15682410 | MS.gene72657:CDS |
| TTTCACAAAGTTAAAGATGA+CGG | 0.527796 | 5.4:+15680139 | MS.gene72657:CDS |
| TGGTAAGAGAAATCAATCAA+TGG | 0.527992 | 5.4:+15681302 | MS.gene72657:CDS |
| ACACTGCTGCACACAGATGC+AGG | 0.529299 | 5.4:-15681826 | None:intergenic |
| CGGATCGTTATCTTGAAACC+TGG | 0.530582 | 5.4:+15680484 | MS.gene72657:CDS |
| TGAATTCAATCAAGGGAGGA+TGG | 0.531417 | 5.4:+15678995 | MS.gene72657:CDS |
| AATAATCGTTATTCAAACGC+TGG | 0.532520 | 5.4:+15679866 | MS.gene72657:CDS |
| TTGAATATGCAATCAGGACC+AGG | 0.536062 | 5.4:-15680502 | None:intergenic |
| AGAGAATCTGAACAGCGAAA+AGG | 0.539618 | 5.4:+15680333 | MS.gene72657:CDS |
| TTGTTGATTTGGCAGAGCTA+AGG | 0.541285 | 5.4:+15682145 | MS.gene72657:intron |
| CACAGCAGTCTCGTCTCTTG+AGG | 0.541373 | 5.4:-15681908 | None:intergenic |
| GAAAGCTTCTACTAGAGGAC+CGG | 0.541402 | 5.4:+15681127 | MS.gene72657:CDS |
| ATTATCAAGTAGAAGAAGAC+TGG | 0.542682 | 5.4:+15679837 | MS.gene72657:CDS |
| CTGCACACAGATGCAGGACT+CGG | 0.548951 | 5.4:-15681820 | None:intergenic |
| TGTTTCGTTGTATCCTTCAC+CGG | 0.549580 | 5.4:+15682611 | MS.gene72657:CDS |
| CTGAATCTAGACAGTGTCAA+AGG | 0.551664 | 5.4:-15682510 | None:intergenic |
| AGTGAATAAAGAGACATATC+CGG | 0.556492 | 5.4:-15682630 | None:intergenic |
| AAGGCGTCGGGAACATCCAC+AGG | 0.557978 | 5.4:+15680198 | MS.gene72657:CDS |
| TTCAAGATAACGATCCGGGT+TGG | 0.558627 | 5.4:-15680478 | None:intergenic |
| AAAGATGACGGCGATGATGA+TGG | 0.560500 | 5.4:+15680151 | MS.gene72657:CDS |
| GTGTCTCAATATCACTTCCT+CGG | 0.563040 | 5.4:-15680657 | None:intergenic |
| CATTGATTATTCCAGACCAA+GGG | 0.564059 | 5.4:-15682686 | None:intergenic |
| GCCTTGTGGCAAGGTTGATG+GGG | 0.567662 | 5.4:+15679954 | MS.gene72657:CDS |
| ACAAATCAAGCAAAATCTTG+TGG | 0.568803 | 5.4:-15682455 | None:intergenic |
| GTTGTCGCCGCCTCAAGGAA+AGG | 0.569359 | 5.4:+15682557 | MS.gene72657:CDS |
| ACAGAGAGTTGTTGTCTCCA+AGG | 0.575318 | 5.4:+15681052 | MS.gene72657:CDS |
| CCGTCGTTCATAAGAACTGT+TGG | 0.578230 | 5.4:-15681378 | None:intergenic |
| GGAACTGTTGAAGTTAGTAT+GGG | 0.578282 | 5.4:+15682578 | MS.gene72657:CDS |
| TCTCAGAAGTACGGCCCAGA+AGG | 0.579017 | 5.4:+15679334 | MS.gene72657:CDS |
| GAGCCCCGGTTAAAATGTGC+CGG | 0.579772 | 5.4:-15681146 | None:intergenic |
| GTTGAAACATCTCAGAAGTA+CGG | 0.583724 | 5.4:+15679325 | MS.gene72657:CDS |
| TCATTGATTATTCCAGACCA+AGG | 0.588363 | 5.4:-15682687 | None:intergenic |
| TCCTTGAGGCGGCGACAACA+TGG | 0.589447 | 5.4:-15682553 | None:intergenic |
| ATGCACCAAGCCTTGTGGCA+AGG | 0.593304 | 5.4:+15679945 | MS.gene72657:CDS |
| TCTTCTATACTATGTCTACC+TGG | 0.595004 | 5.4:-15680562 | None:intergenic |
| ATTTGGAAAGCTTCTACTAG+AGG | 0.598028 | 5.4:+15681122 | MS.gene72657:CDS |
| TAAAGAGACATATCCGGTGA+AGG | 0.598715 | 5.4:-15682624 | None:intergenic |
| CAAACAAGGGAACAAATGGA+AGG | 0.600461 | 5.4:+15680056 | MS.gene72657:CDS |
| CAATCAATGGTAGAATCACA+TGG | 0.601271 | 5.4:+15681315 | MS.gene72657:CDS |
| TCTTGATACAGGAGCAGACA+AGG | 0.604956 | 5.4:-15681088 | None:intergenic |
| AAAGAATAAGTGAAAATATG+GGG | 0.610226 | 5.4:+15680023 | MS.gene72657:CDS |
| TTCAACAGTTCCTTTCCTTG+AGG | 0.611963 | 5.4:-15682567 | None:intergenic |
| TTGAAGCATATCAAGCAGCA+AGG | 0.612487 | 5.4:+15680251 | MS.gene72657:CDS |
| TAATATCTCTCATTGTCGGA+CGG | 0.612745 | 5.4:-15681347 | None:intergenic |
| GGAAAAGGTTATGCGGTCCG+AGG | 0.614051 | 5.4:+15680640 | MS.gene72657:CDS |
| GCGATGATGATGGATGGAGC+CGG | 0.614284 | 5.4:+15680161 | MS.gene72657:CDS |
| TGAGCAGACTGAATTTGAGT+CGG | 0.615214 | 5.4:-15680761 | None:intergenic |
| CACATAATACAAGTATGCAA+AGG | 0.618748 | 5.4:+15680365 | MS.gene72657:CDS |
| ACCCCATCAACCTTGCCACA+AGG | 0.620275 | 5.4:-15679955 | None:intergenic |
| ATGACGGCGATGATGATGGA+TGG | 0.620775 | 5.4:+15680155 | MS.gene72657:CDS |
| CTGATGTCTCTGAAAACTTG+TGG | 0.622401 | 5.4:-15681931 | None:intergenic |
| TGCACCAATTCAGACTCAGA+CGG | 0.623432 | 5.4:-15682225 | None:intergenic |
| GAATAAGTCTTTGTTAAGAG+GGG | 0.627428 | 5.4:+15682317 | MS.gene72657:CDS |
| ACTTGATTCTAGTGATGTCG+AGG | 0.630630 | 5.4:+15682182 | MS.gene72657:CDS |
| ACAAGATCATACGAAGGTGA+AGG | 0.634923 | 5.4:+15680790 | MS.gene72657:CDS |
| ACAATGAGAGATATTACAAG+TGG | 0.637721 | 5.4:+15681354 | MS.gene72657:CDS |
| GAGCAGACAAGGATCTTACA+AGG | 0.642350 | 5.4:-15681077 | None:intergenic |
| AACTGTCGGAAAAGGTTATG+CGG | 0.647191 | 5.4:+15680633 | MS.gene72657:CDS |
| TAACCGGGGCTCATATCCGG+AGG | 0.647535 | 5.4:+15681157 | MS.gene72657:CDS |
| TTGGAGACAACAACTCTCTG+TGG | 0.648215 | 5.4:-15681050 | None:intergenic |
| TAGATGCATCTTCTCCAACC+CGG | 0.653096 | 5.4:+15680464 | MS.gene72657:CDS |
| GCAAAATGCACCAAGCCTTG+TGG | 0.659663 | 5.4:+15679940 | MS.gene72657:CDS |
| TATCCAATCGATCAAGCACA+CGG | 0.659696 | 5.4:+15679918 | MS.gene72657:CDS |
| TCTTGTTGAAGAACTCACAA+AGG | 0.659944 | 5.4:+15682758 | MS.gene72657:CDS |
| AATCTAGACAGTGTCAAAGG+TGG | 0.669822 | 5.4:-15682507 | None:intergenic |
| TATCCGGAGGAAGCTTGAAG+CGG | 0.676693 | 5.4:+15681170 | MS.gene72657:CDS |
| CGTTTGAAATGCGAACTGCA+AGG | 0.679951 | 5.4:+15680607 | MS.gene72657:CDS |
| GCTCACAAGAGACATCATAG+TGG | 0.683907 | 5.4:+15679032 | MS.gene72657:CDS |
| AATCTCTACTGATAAATTCG+GGG | 0.689534 | 5.4:-15680834 | None:intergenic |
| GTGAAGGATACAACGAAACA+CGG | 0.690209 | 5.4:-15682608 | None:intergenic |
| CACACAGATGCAGGACTCGG+AGG | 0.714130 | 5.4:-15681817 | None:intergenic |
| CCAACAGTTCTTATGAACGA+CGG | 0.720547 | 5.4:+15681378 | MS.gene72657:CDS |
| GAATCAACAAGATCATACGA+AGG | 0.725807 | 5.4:+15680784 | MS.gene72657:CDS |
| ACAGTTCTTATGAACGACGG+TGG | 0.731871 | 5.4:+15681381 | MS.gene72657:CDS |
| AGAATTGGACTAGTTCAACA+GGG | 0.749710 | 5.4:+15680533 | MS.gene72657:CDS |
| TCTTTAGGAGAACTACACTG+AGG | 0.805453 | 5.4:+15681792 | MS.gene72657:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAATAAGTGAAAATAT+GGG | + | chr5.4:15680022-15680041 | MS.gene72657:CDS | 15.0% |
| !! | AACAAGATAATAAAAAATCA+AGG | + | chr5.4:15681581-15681600 | MS.gene72657:intron | 15.0% |
| !! | ACAAGATAATAAAAAATCAA+GGG | + | chr5.4:15681582-15681601 | MS.gene72657:intron | 15.0% |
| !! | TAAAAGAATAAGTGAAAATA+TGG | + | chr5.4:15680021-15680040 | MS.gene72657:CDS | 15.0% |
| !! | TCTTAACTTTATATTTATTG+TGG | + | chr5.4:15681542-15681561 | MS.gene72657:intron | 15.0% |
| !! | AAAGAATAAGTGAAAATATG+GGG | + | chr5.4:15680023-15680042 | MS.gene72657:CDS | 20.0% |
| !! | AACTTTATATTTATTGTGGA+GGG | + | chr5.4:15681546-15681565 | MS.gene72657:intron | 20.0% |
| !! | ACTAAATTCAATTCAACAAT+TGG | - | chr5.4:15679796-15679815 | None:intergenic | 20.0% |
| !! | CATAATAAAACAACATTAAC+CGG | - | chr5.4:15682035-15682054 | None:intergenic | 20.0% |
| !! | CATATTGAACATAATTACAA+TGG | - | chr5.4:15679560-15679579 | None:intergenic | 20.0% |
| !! | GTTATAAGATTTGATCATTA+AGG | - | chr5.4:15680440-15680459 | None:intergenic | 20.0% |
| !! | TAACTTTATATTTATTGTGG+AGG | + | chr5.4:15681545-15681564 | MS.gene72657:intron | 20.0% |
| !!! | ACTTTTTTGAATTCAATCAA+GGG | + | chr5.4:15678988-15679007 | MS.gene72657:CDS | 20.0% |
| !!! | GAAATATGATAGTAATTTTC+TGG | - | chr5.4:15679504-15679523 | None:intergenic | 20.0% |
| ! | AACCACTTGATTTAATATGA+TGG | - | chr5.4:15679411-15679430 | None:intergenic | 25.0% |
| ! | AATTTATCAGTAGAGATTCA+AGG | + | chr5.4:15680839-15680858 | MS.gene72657:CDS | 25.0% |
| ! | AGTTTGAAAAGATATTCACT+CGG | - | chr5.4:15682104-15682123 | None:intergenic | 25.0% |
| ! | ATCTTAAAACCGCAATAAAA+AGG | + | chr5.4:15681674-15681693 | MS.gene72657:intron | 25.0% |
| ! | ATGAAATATAAAGGTCATCA+TGG | - | chr5.4:15681731-15681750 | None:intergenic | 25.0% |
| ! | CAACTCTGAATGAAATATAA+AGG | - | chr5.4:15681740-15681759 | None:intergenic | 25.0% |
| ! | CAAGAACTATGGTTTATATT+TGG | - | chr5.4:15679750-15679769 | None:intergenic | 25.0% |
| ! | CAATGAAGAGATCAATATAT+TGG | + | chr5.4:15682704-15682723 | MS.gene72657:CDS | 25.0% |
| ! | GAAATGAATCGAATTCAATA+TGG | - | chr5.4:15680123-15680142 | None:intergenic | 25.0% |
| ! | GAATGATGAAAATTCTATGA+AGG | + | chr5.4:15682410-15682429 | MS.gene72657:CDS | 25.0% |
| ! | TAAAAACAATCAAGCAAAAG+AGG | - | chr5.4:15679232-15679251 | None:intergenic | 25.0% |
| ! | TATTCAATCATGAAGAGAAT+TGG | + | chr5.4:15680518-15680537 | MS.gene72657:CDS | 25.0% |
| ! | TCAAAAACAGAATTTCCAAT+AGG | - | chr5.4:15682357-15682376 | None:intergenic | 25.0% |
| ! | TCTTTATTCACTTGATACTT+TGG | + | chr5.4:15682641-15682660 | MS.gene72657:CDS | 25.0% |
| ! | TGAATCTCTACTGATAAATT+CGG | - | chr5.4:15680839-15680858 | None:intergenic | 25.0% |
| ! | TTTCACAAAGTTAAAGATGA+CGG | + | chr5.4:15680139-15680158 | MS.gene72657:CDS | 25.0% |
| !! | CTTTTCTTGAATCAAAACTA+TGG | - | chr5.4:15682012-15682031 | None:intergenic | 25.0% |
| !! | GATTTATTTGCTTGTTGATT+TGG | + | chr5.4:15682134-15682153 | MS.gene72657:intron | 25.0% |
| !! | TAGTATAGAAGATTTTCTTG+AGG | + | chr5.4:15680573-15680592 | MS.gene72657:CDS | 25.0% |
| !! | TCACTTATTCTTTTATCTGA+TGG | - | chr5.4:15680016-15680035 | None:intergenic | 25.0% |
| !!! | AAATTCTGTTTTTGAAGAAG+TGG | + | chr5.4:15682362-15682381 | MS.gene72657:CDS | 25.0% |
| !!! | CACTTTTTTGAATTCAATCA+AGG | + | chr5.4:15678987-15679006 | MS.gene72657:CDS | 25.0% |
| AAATACAAACAGGATCTTTC+AGG | + | chr5.4:15681001-15681020 | MS.gene72657:CDS | 30.0% | |
| AATAATCGTTATTCAAACGC+TGG | + | chr5.4:15679866-15679885 | MS.gene72657:CDS | 30.0% | |
| AATCTCTACTGATAAATTCG+GGG | - | chr5.4:15680837-15680856 | None:intergenic | 30.0% | |
| ACAAATCAAGCAAAATCTTG+TGG | - | chr5.4:15682458-15682477 | None:intergenic | 30.0% | |
| ACAATGAGAGATATTACAAG+TGG | + | chr5.4:15681354-15681373 | MS.gene72657:CDS | 30.0% | |
| ACATATGAAGAGAAACTTAC+CGG | - | chr5.4:15679367-15679386 | None:intergenic | 30.0% | |
| AGCAAAACTGTATCTCAAAT+TGG | - | chr5.4:15681265-15681284 | None:intergenic | 30.0% | |
| AGTGAATAAAGAGACATATC+CGG | - | chr5.4:15682633-15682652 | None:intergenic | 30.0% | |
| ATAAACCATAGTTCTTGTTC+TGG | + | chr5.4:15679753-15679772 | MS.gene72657:intron | 30.0% | |
| ATGCATATCTTGCTGAAATT+CGG | + | chr5.4:15679140-15679159 | MS.gene72657:intron | 30.0% | |
| ATTATCAAGTAGAAGAAGAC+TGG | + | chr5.4:15679837-15679856 | MS.gene72657:CDS | 30.0% | |
| ATTTGACGAGCAATAAGTTT+AGG | - | chr5.4:15680706-15680725 | None:intergenic | 30.0% | |
| CACATAATACAAGTATGCAA+AGG | + | chr5.4:15680365-15680384 | MS.gene72657:CDS | 30.0% | |
| CACCATCATATTAAATCAAG+TGG | + | chr5.4:15679406-15679425 | MS.gene72657:intron | 30.0% | |
| CTTGTAATATCTCTCATTGT+CGG | - | chr5.4:15681354-15681373 | None:intergenic | 30.0% | |
| GAAGAAACAGAAATACAAAC+AGG | + | chr5.4:15680991-15681010 | MS.gene72657:CDS | 30.0% | |
| GAATAAGTCTTTGTTAAGAG+GGG | + | chr5.4:15682317-15682336 | MS.gene72657:CDS | 30.0% | |
| GAATCTCTACTGATAAATTC+GGG | - | chr5.4:15680838-15680857 | None:intergenic | 30.0% | |
| GATCAATATATTGGAAAGAG+AGG | + | chr5.4:15682713-15682732 | MS.gene72657:CDS | 30.0% | |
| GGAATAAGTCTTTGTTAAGA+GGG | + | chr5.4:15682316-15682335 | MS.gene72657:CDS | 30.0% | |
| GGGAAGAGAGAAAAAAATTA+CGG | - | chr5.4:15679206-15679225 | None:intergenic | 30.0% | |
| GTCTTTCTCAAGATTCTAAA+AGG | - | chr5.4:15679585-15679604 | None:intergenic | 30.0% | |
| TAATACCAGAACAAGAACTA+TGG | - | chr5.4:15679761-15679780 | None:intergenic | 30.0% | |
| TATATTAAAAGCCAAGACCA+AGG | - | chr5.4:15679644-15679663 | None:intergenic | 30.0% | |
| TCATGATTGAATATGCAATC+AGG | - | chr5.4:15680511-15680530 | None:intergenic | 30.0% | |
| TGGAATAAGTCTTTGTTAAG+AGG | + | chr5.4:15682315-15682334 | MS.gene72657:CDS | 30.0% | |
| TGGTAAGAGAAATCAATCAA+TGG | + | chr5.4:15681302-15681321 | MS.gene72657:CDS | 30.0% | |
| ! | TATAGAAGATTTTCTTGAGG+AGG | + | chr5.4:15680576-15680595 | MS.gene72657:CDS | 30.0% |
| ! | TTTGAAATGTGCAGATGAAT+GGG | + | chr5.4:15680957-15680976 | MS.gene72657:CDS | 30.0% |
| ! | TTTTCAAACAAGGGAACAAA+TGG | + | chr5.4:15680052-15680071 | MS.gene72657:CDS | 30.0% |
| ! | TTTTCTGCTATATGCTCTTT+AGG | + | chr5.4:15681777-15681796 | MS.gene72657:intron | 30.0% |
| ! | TTTTTGAATTCAATCAAGGG+AGG | + | chr5.4:15678991-15679010 | MS.gene72657:CDS | 30.0% |
| !!! | AGTTTTGATTCAAGAAAAGC+CGG | + | chr5.4:15682013-15682032 | MS.gene72657:intron | 30.0% |
| !!! | TTTTGAAATGTGCAGATGAA+TGG | + | chr5.4:15680956-15680975 | MS.gene72657:CDS | 30.0% |
| ACAATCAAGCAAAAGAGGAA+AGG | - | chr5.4:15679227-15679246 | None:intergenic | 35.0% | |
| AGGAACTGTTGAAGTTAGTA+TGG | + | chr5.4:15682577-15682596 | MS.gene72657:CDS | 35.0% | |
| ATTGTGGAGGGATAAATAGA+TGG | + | chr5.4:15681558-15681577 | MS.gene72657:intron | 35.0% | |
| ATTTGGAAAGCTTCTACTAG+AGG | + | chr5.4:15681122-15681141 | MS.gene72657:CDS | 35.0% | |
| CAATCAAGCAAAAGAGGAAA+GGG | - | chr5.4:15679226-15679245 | None:intergenic | 35.0% | |
| CAATCAATGGTAGAATCACA+TGG | + | chr5.4:15681315-15681334 | MS.gene72657:CDS | 35.0% | |
| CCGCAATAAAAAGGAATGAA+CGG | + | chr5.4:15681683-15681702 | MS.gene72657:intron | 35.0% | |
| CTCTATAAATGACGGTTTCA+TGG | + | chr5.4:15679680-15679699 | MS.gene72657:intron | 35.0% | |
| GAAACCGTCATTTATAGAGA+TGG | - | chr5.4:15679679-15679698 | None:intergenic | 35.0% | |
| GAATCAACAAGATCATACGA+AGG | + | chr5.4:15680784-15680803 | MS.gene72657:CDS | 35.0% | |
| GAATCACTTTCAGTTGTTCT+TGG | + | chr5.4:15682483-15682502 | MS.gene72657:CDS | 35.0% | |
| GATACATATGCAAAGCCTAT+TGG | + | chr5.4:15682339-15682358 | MS.gene72657:CDS | 35.0% | |
| GGAACTGTTGAAGTTAGTAT+GGG | + | chr5.4:15682578-15682597 | MS.gene72657:CDS | 35.0% | |
| GGTTGAAAAGGAATGAGTAA+TGG | - | chr5.4:15681437-15681456 | None:intergenic | 35.0% | |
| GTCACCATCTCTATAAATGA+CGG | + | chr5.4:15679672-15679691 | MS.gene72657:intron | 35.0% | |
| GTGACAACTGAGGAAAATAA+GGG | - | chr5.4:15679173-15679192 | None:intergenic | 35.0% | |
| GTTGAAACATCTCAGAAGTA+CGG | + | chr5.4:15679325-15679344 | MS.gene72657:CDS | 35.0% | |
| TAATATCTCTCATTGTCGGA+CGG | - | chr5.4:15681350-15681369 | None:intergenic | 35.0% | |
| TCAAGATCAGGAACATCATT+TGG | + | chr5.4:15681105-15681124 | MS.gene72657:CDS | 35.0% | |
| TCTCTTATGTAAGATTCTGC+TGG | - | chr5.4:15682261-15682280 | None:intergenic | 35.0% | |
| TCTTCTATACTATGTCTACC+TGG | - | chr5.4:15680565-15680584 | None:intergenic | 35.0% | |
| TCTTGTTGAAGAACTCACAA+AGG | + | chr5.4:15682758-15682777 | MS.gene72657:CDS | 35.0% | |
| TGAAAAGGAATGAGTAATGG+AGG | - | chr5.4:15681434-15681453 | None:intergenic | 35.0% | |
| TGACAACTGAGGAAAATAAG+GGG | - | chr5.4:15679172-15679191 | None:intergenic | 35.0% | |
| TGCATATCTTGCTGAAATTC+GGG | + | chr5.4:15679141-15679160 | MS.gene72657:intron | 35.0% | |
| TGGTTAATGAGCTTCAGTTA+AGG | + | chr5.4:15679426-15679445 | MS.gene72657:intron | 35.0% | |
| TGTGACAACTGAGGAAAATA+AGG | - | chr5.4:15679174-15679193 | None:intergenic | 35.0% | |
| TGTTCAAAGTTTGCCGAAAT+CGG | + | chr5.4:15680283-15680302 | MS.gene72657:CDS | 35.0% | |
| TTCACTCATGTTATGATGAG+AGG | + | chr5.4:15679096-15679115 | MS.gene72657:intron | 35.0% | |
| ! | AACATTTGAGTTCAATCCCT+TGG | + | chr5.4:15682670-15682689 | MS.gene72657:CDS | 35.0% |
| ! | AGAGATTTACTTGTTGCTTC+TGG | + | chr5.4:15682276-15682295 | MS.gene72657:CDS | 35.0% |
| ! | CATTGATTATTCCAGACCAA+GGG | - | chr5.4:15682689-15682708 | None:intergenic | 35.0% |
| ! | CCGTTCATTCCTTTTTATTG+CGG | - | chr5.4:15681686-15681705 | None:intergenic | 35.0% |
| ! | GAAAAGGAATGAGTAATGGA+GGG | - | chr5.4:15681433-15681452 | None:intergenic | 35.0% |
| ! | GCAATAAGTTTAGGATCAGA+TGG | - | chr5.4:15680697-15680716 | None:intergenic | 35.0% |
| ! | GGGAAGAAGTTTTCAAACAA+GGG | + | chr5.4:15680043-15680062 | MS.gene72657:CDS | 35.0% |
| ! | TCATTGATTATTCCAGACCA+AGG | - | chr5.4:15682690-15682709 | None:intergenic | 35.0% |
| !! | AGAATTGGACTAGTTCAACA+GGG | + | chr5.4:15680533-15680552 | MS.gene72657:CDS | 35.0% |
| !! | AGATACAGTTTTGCTCTAAG+AGG | + | chr5.4:15681270-15681289 | MS.gene72657:CDS | 35.0% |
| !! | CTGGTTTATACTTTGGTTCT+TGG | + | chr5.4:15682295-15682314 | MS.gene72657:CDS | 35.0% |
| !! | GTTGCTTCTGGTTTATACTT+TGG | + | chr5.4:15682288-15682307 | MS.gene72657:CDS | 35.0% |
| !!! | GATACAGTTTTGCTCTAAGA+GGG | + | chr5.4:15681271-15681290 | MS.gene72657:CDS | 35.0% |
| AACTGTCGGAAAAGGTTATG+CGG | + | chr5.4:15680633-15680652 | MS.gene72657:CDS | 40.0% | |
| AAGGATCTTACAAGGTTCCT+TGG | - | chr5.4:15681072-15681091 | None:intergenic | 40.0% | |
| AATCTAGACAGTGTCAAAGG+TGG | - | chr5.4:15682510-15682529 | None:intergenic | 40.0% | |
| ACAAGATCATACGAAGGTGA+AGG | + | chr5.4:15680790-15680809 | MS.gene72657:CDS | 40.0% | |
| ACGAACAAGGGGATATAAGA+AGG | - | chr5.4:15679526-15679545 | None:intergenic | 40.0% | |
| ACTTGATTCTAGTGATGTCG+AGG | + | chr5.4:15682182-15682201 | MS.gene72657:CDS | 40.0% | |
| AGAGAATCTGAACAGCGAAA+AGG | + | chr5.4:15680333-15680352 | MS.gene72657:CDS | 40.0% | |
| AGGTTTCAAGATAACGATCC+GGG | - | chr5.4:15680485-15680504 | None:intergenic | 40.0% | |
| ATATCAAGCAGCAAGGTTTC+AGG | + | chr5.4:15680258-15680277 | MS.gene72657:CDS | 40.0% | |
| ATGGAAGGAGTTCAGTTAGT+TGG | + | chr5.4:15680071-15680090 | MS.gene72657:CDS | 40.0% | |
| CAAACAAGGGAACAAATGGA+AGG | + | chr5.4:15680056-15680075 | MS.gene72657:CDS | 40.0% | |
| CAAGGAAAAACTGTCGGAAA+AGG | + | chr5.4:15680625-15680644 | MS.gene72657:CDS | 40.0% | |
| CAGGTTTCAAGATAACGATC+CGG | - | chr5.4:15680486-15680505 | None:intergenic | 40.0% | |
| CCAACAGTTCTTATGAACGA+CGG | + | chr5.4:15681378-15681397 | MS.gene72657:CDS | 40.0% | |
| CTGAATCTAGACAGTGTCAA+AGG | - | chr5.4:15682513-15682532 | None:intergenic | 40.0% | |
| CTTAGAGTTCTGCTCTTTGA+AGG | - | chr5.4:15680400-15680419 | None:intergenic | 40.0% | |
| CTTGTGAGCATGAACTTTCT+TGG | - | chr5.4:15679021-15679040 | None:intergenic | 40.0% | |
| GAACTGCAAGGAAAAACTGT+CGG | + | chr5.4:15680619-15680638 | MS.gene72657:CDS | 40.0% | |
| GAATTCTTCTGCAGAAGTGA+GGG | - | chr5.4:15681458-15681477 | None:intergenic | 40.0% | |
| GACAACTGAGGAAAATAAGG+GGG | - | chr5.4:15679171-15679190 | None:intergenic | 40.0% | |
| GATGTTCCTGATCTTGATAC+AGG | - | chr5.4:15681102-15681121 | None:intergenic | 40.0% | |
| GCCTTTGTTCTCCAAAATTC+CGG | - | chr5.4:15680183-15680202 | None:intergenic | 40.0% | |
| GCTAGAAACACTTCCGATTT+CGG | - | chr5.4:15680299-15680318 | None:intergenic | 40.0% | |
| GGTCAATGATTGTTTCAGCT+AGG | - | chr5.4:15679483-15679502 | None:intergenic | 40.0% | |
| GTCATTGTTACCACGAACAA+GGG | - | chr5.4:15679538-15679557 | None:intergenic | 40.0% | |
| GTGAAGGATACAACGAAACA+CGG | - | chr5.4:15682611-15682630 | None:intergenic | 40.0% | |
| GTGTCTCAATATCACTTCCT+CGG | - | chr5.4:15680660-15680679 | None:intergenic | 40.0% | |
| TAAAGAGACATATCCGGTGA+AGG | - | chr5.4:15682627-15682646 | None:intergenic | 40.0% | |
| TATCCAATCGATCAAGCACA+CGG | + | chr5.4:15679918-15679937 | MS.gene72657:CDS | 40.0% | |
| TCAAGAACATGTGACAACTG+AGG | - | chr5.4:15679183-15679202 | None:intergenic | 40.0% | |
| TCATTGTTACCACGAACAAG+GGG | - | chr5.4:15679537-15679556 | None:intergenic | 40.0% | |
| TGAATTCAATCAAGGGAGGA+TGG | + | chr5.4:15678995-15679014 | MS.gene72657:CDS | 40.0% | |
| TGAGCAGACTGAATTTGAGT+CGG | - | chr5.4:15680764-15680783 | None:intergenic | 40.0% | |
| TGGAAGGAGTTCAGTTAGTT+GGG | + | chr5.4:15680072-15680091 | MS.gene72657:CDS | 40.0% | |
| TGTTTCGTTGTATCCTTCAC+CGG | + | chr5.4:15682611-15682630 | MS.gene72657:CDS | 40.0% | |
| TTACCGGTAATTCTCCTTCT+GGG | - | chr5.4:15679351-15679370 | None:intergenic | 40.0% | |
| TTCAACAGTTCCTTTCCTTG+AGG | - | chr5.4:15682570-15682589 | None:intergenic | 40.0% | |
| TTCTTATATCCCCTTGTTCG+TGG | + | chr5.4:15679525-15679544 | MS.gene72657:intron | 40.0% | |
| TTGAAGCATATCAAGCAGCA+AGG | + | chr5.4:15680251-15680270 | MS.gene72657:CDS | 40.0% | |
| TTGAATATGCAATCAGGACC+AGG | - | chr5.4:15680505-15680524 | None:intergenic | 40.0% | |
| ! | CTGATGTCTCTGAAAACTTG+TGG | - | chr5.4:15681934-15681953 | None:intergenic | 40.0% |
| ! | CTTTTATCTGATGGAGCAAC+AGG | - | chr5.4:15680007-15680026 | None:intergenic | 40.0% |
| ! | GCAGTGTTCATGAAGACTTT+TGG | + | chr5.4:15681842-15681861 | MS.gene72657:CDS | 40.0% |
| ! | GGGGAAGAAGTTTTCAAACA+AGG | + | chr5.4:15680042-15680061 | MS.gene72657:CDS | 40.0% |
| ! | GTGTTCATGAAGACTTTTGG+AGG | + | chr5.4:15681845-15681864 | MS.gene72657:CDS | 40.0% |
| ! | TCTTTAGGAGAACTACACTG+AGG | + | chr5.4:15681792-15681811 | MS.gene72657:intron | 40.0% |
| !! | ATTTTGGAGAACAAAGGCGT+CGG | + | chr5.4:15680185-15680204 | MS.gene72657:CDS | 40.0% |
| !! | GACAAATCAGGAGTTGATAC+TGG | - | chr5.4:15681889-15681908 | None:intergenic | 40.0% |
| !! | GAGAATTGGACTAGTTCAAC+AGG | + | chr5.4:15680532-15680551 | MS.gene72657:CDS | 40.0% |
| !! | TTGTTGATTTGGCAGAGCTA+AGG | + | chr5.4:15682145-15682164 | MS.gene72657:intron | 40.0% |
| !!! | TTCTGAAGTTCCTTTTCCTG+TGG | - | chr5.4:15680217-15680236 | None:intergenic | 40.0% |
| AACAGTTCCTTTCCTTGAGG+CGG | - | chr5.4:15682567-15682586 | None:intergenic | 45.0% | |
| ACAGAGAGTTGTTGTCTCCA+AGG | + | chr5.4:15681052-15681071 | MS.gene72657:CDS | 45.0% | |
| ACAGTTCTTATGAACGACGG+TGG | + | chr5.4:15681381-15681400 | MS.gene72657:CDS | 45.0% | |
| AGTTCAACAGGGACTTTACC+AGG | + | chr5.4:15680544-15680563 | MS.gene72657:CDS | 45.0% | |
| ATCTTGAGAAAGACCCCTCA+AGG | + | chr5.4:15679591-15679610 | MS.gene72657:intron | 45.0% | |
| ATTCAGACTCAGACGGTTTC+TGG | - | chr5.4:15682221-15682240 | None:intergenic | 45.0% | |
| CCGTCGTTCATAAGAACTGT+TGG | - | chr5.4:15681381-15681400 | None:intergenic | 45.0% | |
| CGAATTCTTCTGCAGAAGTG+AGG | - | chr5.4:15681459-15681478 | None:intergenic | 45.0% | |
| CGGATCGTTATCTTGAAACC+TGG | + | chr5.4:15680484-15680503 | MS.gene72657:CDS | 45.0% | |
| CTACTCTCCTACAACCTTGA+GGG | - | chr5.4:15679608-15679627 | None:intergenic | 45.0% | |
| CTGATAAATTCGGGGACACT+TGG | - | chr5.4:15680829-15680848 | None:intergenic | 45.0% | |
| CTTACCGGTAATTCTCCTTC+TGG | - | chr5.4:15679352-15679371 | None:intergenic | 45.0% | |
| GAAACCGTCTGAGTCTGAAT+TGG | + | chr5.4:15682221-15682240 | MS.gene72657:CDS | 45.0% | |
| GAAAGCTTCTACTAGAGGAC+CGG | + | chr5.4:15681127-15681146 | MS.gene72657:CDS | 45.0% | |
| GAGCAGACAAGGATCTTACA+AGG | - | chr5.4:15681080-15681099 | None:intergenic | 45.0% | |
| GCAACAGGTTTAGTGTCTAC+AGG | - | chr5.4:15679992-15680011 | None:intergenic | 45.0% | |
| GCTCACAAGAGACATCATAG+TGG | + | chr5.4:15679032-15679051 | MS.gene72657:CDS | 45.0% | |
| GGTCATTGTTACCACGAACA+AGG | - | chr5.4:15679539-15679558 | None:intergenic | 45.0% | |
| GTAGAGCACATGTATAGCCT+TGG | + | chr5.4:15679624-15679643 | MS.gene72657:intron | 45.0% | |
| TACTCTCCTACAACCTTGAG+GGG | - | chr5.4:15679607-15679626 | None:intergenic | 45.0% | |
| TAGATGCATCTTCTCCAACC+CGG | + | chr5.4:15680464-15680483 | MS.gene72657:CDS | 45.0% | |
| TCGTCTCTTGAGGACAAATC+AGG | - | chr5.4:15681901-15681920 | None:intergenic | 45.0% | |
| TCTACTCTCCTACAACCTTG+AGG | - | chr5.4:15679609-15679628 | None:intergenic | 45.0% | |
| TCTGCTCCTGTATCAAGATC+AGG | + | chr5.4:15681093-15681112 | MS.gene72657:CDS | 45.0% | |
| TCTTGATACAGGAGCAGACA+AGG | - | chr5.4:15681091-15681110 | None:intergenic | 45.0% | |
| TGCACCAATTCAGACTCAGA+CGG | - | chr5.4:15682228-15682247 | None:intergenic | 45.0% | |
| TGCAGAAGTGAGGGTTGAAA+AGG | - | chr5.4:15681449-15681468 | None:intergenic | 45.0% | |
| TTCAAGATAACGATCCGGGT+TGG | - | chr5.4:15680481-15680500 | None:intergenic | 45.0% | |
| TTGAGTTCAATCCCTTGGTC+TGG | + | chr5.4:15682675-15682694 | MS.gene72657:CDS | 45.0% | |
| TTGGAGACAACAACTCTCTG+TGG | - | chr5.4:15681053-15681072 | None:intergenic | 45.0% | |
| ! | AAAGATGACGGCGATGATGA+TGG | + | chr5.4:15680151-15680170 | MS.gene72657:CDS | 45.0% |
| ! | CACATGTATAGCCTTGGTCT+TGG | + | chr5.4:15679630-15679649 | MS.gene72657:intron | 45.0% |
| ! | CGTTTGAAATGCGAACTGCA+AGG | + | chr5.4:15680607-15680626 | MS.gene72657:CDS | 45.0% |
| ! | GACATCAGCTCTGGTTTAAC+TGG | + | chr5.4:15681946-15681965 | MS.gene72657:CDS | 45.0% |
| ! | GTTTTCAGAGACATCAGCTC+TGG | + | chr5.4:15681937-15681956 | MS.gene72657:CDS | 45.0% |
| ! | TTTTAACCGGGGCTCATATC+CGG | + | chr5.4:15681154-15681173 | MS.gene72657:CDS | 45.0% |
| !! | GCCGGAATTTTGGAGAACAA+AGG | + | chr5.4:15680179-15680198 | MS.gene72657:CDS | 45.0% |
| !!! | ACAGTTTTGCTCTAAGAGGG+AGG | + | chr5.4:15681274-15681293 | MS.gene72657:CDS | 45.0% |
| !!! | GCTCTAAGAGGGAGGATTTT+TGG | + | chr5.4:15681282-15681301 | MS.gene72657:CDS | 45.0% |
| !!! | TTTTGGAGAACAAAGGCGTC+GGG | + | chr5.4:15680186-15680205 | MS.gene72657:CDS | 45.0% |
| ATCAACCTTGCCACAAGGCT+TGG | - | chr5.4:15679953-15679972 | None:intergenic | 50.0% | |
| GAAAGACCCCTCAAGGTTGT+AGG | + | chr5.4:15679598-15679617 | MS.gene72657:intron | 50.0% | |
| GCAAAATGCACCAAGCCTTG+TGG | + | chr5.4:15679940-15679959 | MS.gene72657:CDS | 50.0% | |
| TATCCGGAGGAAGCTTGAAG+CGG | + | chr5.4:15681170-15681189 | MS.gene72657:CDS | 50.0% | |
| TCGGGAACATCCACAGGAAA+AGG | + | chr5.4:15680204-15680223 | MS.gene72657:CDS | 50.0% | |
| TTGCCGTGTGCTTGATCGAT+TGG | - | chr5.4:15679924-15679943 | None:intergenic | 50.0% | |
| ! | AAGCCTTGTGGCAAGGTTGA+TGG | + | chr5.4:15679952-15679971 | MS.gene72657:CDS | 50.0% |
| ! | AGCCTTGTGGCAAGGTTGAT+GGG | + | chr5.4:15679953-15679972 | MS.gene72657:CDS | 50.0% |
| ! | GATGGATGGAGCCGGAATTT+TGG | + | chr5.4:15680169-15680188 | MS.gene72657:CDS | 50.0% |
| !! | AGGACCGGCACATTTTAACC+GGG | + | chr5.4:15681142-15681161 | MS.gene72657:CDS | 50.0% |
| !! | ATGACGGCGATGATGATGGA+TGG | + | chr5.4:15680155-15680174 | MS.gene72657:CDS | 50.0% |
| !! | GAGGACCGGCACATTTTAAC+CGG | + | chr5.4:15681141-15681160 | MS.gene72657:CDS | 50.0% |
| ACACTGCTGCACACAGATGC+AGG | - | chr5.4:15681829-15681848 | None:intergenic | 55.0% | |
| ACCCCATCAACCTTGCCACA+AGG | - | chr5.4:15679958-15679977 | None:intergenic | 55.0% | |
| CAACCGCTTCAAGCTTCCTC+CGG | - | chr5.4:15681176-15681195 | None:intergenic | 55.0% | |
| CACAGCAGTCTCGTCTCTTG+AGG | - | chr5.4:15681911-15681930 | None:intergenic | 55.0% | |
| CGGCCCAGAAGGAGAATTAC+CGG | + | chr5.4:15679345-15679364 | MS.gene72657:CDS | 55.0% | |
| CTGCACACAGATGCAGGACT+CGG | - | chr5.4:15681823-15681842 | None:intergenic | 55.0% | |
| GAGCCCCGGTTAAAATGTGC+CGG | - | chr5.4:15681149-15681168 | None:intergenic | 55.0% | |
| GGAAAAGGTTATGCGGTCCG+AGG | + | chr5.4:15680640-15680659 | MS.gene72657:CDS | 55.0% | |
| ! | ATGCACCAAGCCTTGTGGCA+AGG | + | chr5.4:15679945-15679964 | MS.gene72657:CDS | 55.0% |
| ! | TCTCAGAAGTACGGCCCAGA+AGG | + | chr5.4:15679334-15679353 | MS.gene72657:CDS | 55.0% |
| !! | GCCTTGTGGCAAGGTTGATG+GGG | + | chr5.4:15679954-15679973 | MS.gene72657:CDS | 55.0% |
| !! | GCGATGATGATGGATGGAGC+CGG | + | chr5.4:15680161-15680180 | MS.gene72657:CDS | 55.0% |
| !! | GGACCGGCACATTTTAACCG+GGG | + | chr5.4:15681143-15681162 | MS.gene72657:CDS | 55.0% |
| CACACAGATGCAGGACTCGG+AGG | - | chr5.4:15681820-15681839 | None:intergenic | 60.0% | |
| CTTCCTCCGGATATGAGCCC+CGG | - | chr5.4:15681163-15681182 | None:intergenic | 60.0% | |
| GTTGTCGCCGCCTCAAGGAA+AGG | + | chr5.4:15682557-15682576 | MS.gene72657:CDS | 60.0% | |
| TAACCGGGGCTCATATCCGG+AGG | + | chr5.4:15681157-15681176 | MS.gene72657:CDS | 60.0% | |
| TCCATGTTGTCGCCGCCTCA+AGG | + | chr5.4:15682552-15682571 | MS.gene72657:CDS | 60.0% | |
| TCCTTGAGGCGGCGACAACA+TGG | - | chr5.4:15682556-15682575 | None:intergenic | 60.0% | |
| !! | AAGGCGTCGGGAACATCCAC+AGG | + | chr5.4:15680198-15680217 | MS.gene72657:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 15678972 | 15682791 | 15678972 | ID=MS.gene72657 |
| chr5.4 | mRNA | 15678972 | 15682791 | 15678972 | ID=MS.gene72657.t1;Parent=MS.gene72657 |
| chr5.4 | exon | 15678972 | 15679053 | 15678972 | ID=MS.gene72657.t1.exon1;Parent=MS.gene72657.t1 |
| chr5.4 | CDS | 15678972 | 15679053 | 15678972 | ID=cds.MS.gene72657.t1;Parent=MS.gene72657.t1 |
| chr5.4 | exon | 15679290 | 15679366 | 15679290 | ID=MS.gene72657.t1.exon2;Parent=MS.gene72657.t1 |
| chr5.4 | CDS | 15679290 | 15679366 | 15679290 | ID=cds.MS.gene72657.t1;Parent=MS.gene72657.t1 |
| chr5.4 | exon | 15679833 | 15681413 | 15679833 | ID=MS.gene72657.t1.exon3;Parent=MS.gene72657.t1 |
| chr5.4 | CDS | 15679833 | 15681413 | 15679833 | ID=cds.MS.gene72657.t1;Parent=MS.gene72657.t1 |
| chr5.4 | exon | 15681799 | 15681967 | 15681799 | ID=MS.gene72657.t1.exon4;Parent=MS.gene72657.t1 |
| chr5.4 | CDS | 15681799 | 15681967 | 15681799 | ID=cds.MS.gene72657.t1;Parent=MS.gene72657.t1 |
| chr5.4 | exon | 15682160 | 15682791 | 15682160 | ID=MS.gene72657.t1.exon5;Parent=MS.gene72657.t1 |
| chr5.4 | CDS | 15682160 | 15682791 | 15682160 | ID=cds.MS.gene72657.t1;Parent=MS.gene72657.t1 |
| Gene Sequence |
| Protein sequence |
