Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72677.t1 | XP_003612408.2 | 96.3 | 573 | 14 | 3 | 1 | 572 | 1 | 567 | 0.00E+00 | 1079.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72677.t1 | O22757 | 57.6 | 576 | 227 | 7 | 4 | 565 | 10 | 582 | 1.0e-179 | 631.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72677.t1 | G7K2K3 | 96.3 | 573 | 14 | 3 | 1 | 572 | 1 | 567 | 0.0e+00 | 1079.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054548 | MS.gene72677 | 0.803342 | 3.65E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene72677 | 0.811641 | 6.33E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72677.t1 | MTR_5g024700 | 96.335 | 573 | 14 | 3 | 1 | 572 | 1 | 567 | 0.0 | 1131 |
| MS.gene72677.t1 | MTR_8g073130 | 69.052 | 559 | 155 | 10 | 3 | 551 | 8 | 558 | 0.0 | 749 |
| MS.gene72677.t1 | MTR_8g073130 | 69.779 | 407 | 115 | 5 | 3 | 405 | 8 | 410 | 0.0 | 583 |
| MS.gene72677.t1 | MTR_8g073130 | 70.153 | 392 | 109 | 5 | 3 | 390 | 8 | 395 | 0.0 | 561 |
| MS.gene72677.t1 | MTR_3g115960 | 54.528 | 530 | 205 | 6 | 28 | 527 | 9 | 532 | 0.0 | 548 |
| MS.gene72677.t1 | MTR_3g115940 | 46.320 | 557 | 263 | 11 | 30 | 565 | 9 | 550 | 6.92e-167 | 486 |
| MS.gene72677.t1 | MTR_6g033330 | 47.421 | 504 | 254 | 6 | 30 | 524 | 9 | 510 | 6.73e-161 | 471 |
| MS.gene72677.t1 | MTR_3g115940 | 45.793 | 511 | 243 | 11 | 75 | 565 | 3 | 499 | 2.02e-154 | 452 |
| MS.gene72677.t1 | MTR_2g093750 | 45.224 | 513 | 258 | 6 | 30 | 524 | 8 | 515 | 1.54e-148 | 440 |
| MS.gene72677.t1 | MTR_3g115940 | 42.549 | 557 | 241 | 12 | 30 | 565 | 9 | 507 | 1.29e-140 | 417 |
| MS.gene72677.t1 | MTR_6g033330 | 46.829 | 410 | 211 | 3 | 23 | 425 | 2 | 411 | 2.38e-134 | 397 |
| MS.gene72677.t1 | MTR_3g115940 | 51.302 | 384 | 171 | 5 | 30 | 404 | 9 | 385 | 4.01e-131 | 388 |
| MS.gene72677.t1 | MTR_8g010530 | 42.944 | 496 | 258 | 6 | 30 | 504 | 12 | 503 | 5.37e-127 | 382 |
| MS.gene72677.t1 | MTR_3g118190 | 43.297 | 455 | 231 | 6 | 30 | 466 | 12 | 457 | 1.35e-126 | 381 |
| MS.gene72677.t1 | MTR_4g079140 | 38.552 | 511 | 276 | 6 | 30 | 537 | 7 | 482 | 5.29e-119 | 363 |
| MS.gene72677.t1 | MTR_8g010500 | 42.612 | 467 | 246 | 8 | 48 | 494 | 28 | 492 | 3.79e-116 | 355 |
| MS.gene72677.t1 | MTR_2g028470 | 40.249 | 482 | 263 | 8 | 29 | 498 | 7 | 475 | 1.64e-109 | 336 |
| MS.gene72677.t1 | MTR_2g079500 | 37.705 | 488 | 267 | 10 | 23 | 492 | 2 | 470 | 7.34e-105 | 327 |
| MS.gene72677.t1 | MTR_2g006280 | 33.333 | 546 | 324 | 13 | 30 | 547 | 9 | 542 | 8.52e-82 | 266 |
| MS.gene72677.t1 | MTR_5g022400 | 34.241 | 514 | 314 | 11 | 24 | 527 | 4 | 503 | 2.32e-81 | 265 |
| MS.gene72677.t1 | MTR_5g022400 | 35.052 | 388 | 237 | 8 | 24 | 401 | 4 | 386 | 1.54e-59 | 203 |
| MS.gene72677.t1 | MTR_2g030020 | 38.017 | 121 | 46 | 4 | 368 | 488 | 8 | 99 | 9.24e-18 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72677.t1 | AT2G17480 | 58.887 | 557 | 214 | 7 | 21 | 565 | 29 | 582 | 0.0 | 649 |
| MS.gene72677.t1 | AT2G17430 | 57.169 | 544 | 219 | 4 | 3 | 545 | 8 | 538 | 0.0 | 623 |
| MS.gene72677.t1 | AT5G65970 | 57.295 | 562 | 212 | 8 | 15 | 567 | 21 | 563 | 0.0 | 615 |
| MS.gene72677.t1 | AT2G33670 | 55.711 | 499 | 203 | 6 | 30 | 527 | 15 | 496 | 0.0 | 554 |
| MS.gene72677.t1 | AT1G42560 | 58.222 | 450 | 182 | 4 | 30 | 476 | 14 | 460 | 0.0 | 518 |
| MS.gene72677.t1 | AT1G61560 | 46.618 | 547 | 268 | 7 | 30 | 564 | 8 | 542 | 8.16e-169 | 492 |
| MS.gene72677.t1 | AT1G61560 | 45.537 | 549 | 271 | 9 | 30 | 564 | 8 | 542 | 1.34e-161 | 473 |
| MS.gene72677.t1 | AT5G65970 | 60.989 | 364 | 126 | 4 | 15 | 378 | 21 | 368 | 1.13e-160 | 467 |
| MS.gene72677.t1 | AT1G11310 | 50.000 | 458 | 214 | 3 | 30 | 472 | 8 | 465 | 2.69e-156 | 459 |
| MS.gene72677.t1 | AT2G39200 | 43.956 | 546 | 284 | 9 | 30 | 562 | 6 | 542 | 2.02e-153 | 452 |
| MS.gene72677.t1 | AT1G61560 | 51.620 | 432 | 197 | 3 | 29 | 448 | 7 | 438 | 4.47e-153 | 447 |
| MS.gene72677.t1 | AT1G61560 | 44.919 | 492 | 247 | 7 | 85 | 564 | 1 | 480 | 2.04e-142 | 422 |
| MS.gene72677.t1 | AT1G61560 | 44.919 | 492 | 247 | 7 | 85 | 564 | 1 | 480 | 2.04e-142 | 422 |
| MS.gene72677.t1 | AT1G61560 | 50.856 | 409 | 189 | 3 | 29 | 425 | 7 | 415 | 2.64e-141 | 416 |
| MS.gene72677.t1 | AT1G61560 | 50.856 | 409 | 189 | 3 | 29 | 425 | 7 | 415 | 2.64e-141 | 416 |
| MS.gene72677.t1 | AT1G42560 | 57.027 | 370 | 153 | 4 | 30 | 396 | 14 | 380 | 1.44e-138 | 407 |
| MS.gene72677.t1 | AT3G45290 | 42.888 | 457 | 248 | 3 | 30 | 486 | 17 | 460 | 2.82e-135 | 404 |
| MS.gene72677.t1 | AT1G61560 | 51.429 | 385 | 175 | 3 | 29 | 401 | 7 | 391 | 3.42e-134 | 397 |
| MS.gene72677.t1 | AT1G61560 | 51.429 | 385 | 175 | 3 | 29 | 401 | 7 | 391 | 3.42e-134 | 397 |
| MS.gene72677.t1 | AT1G61560 | 51.429 | 385 | 175 | 3 | 29 | 401 | 7 | 391 | 3.42e-134 | 397 |
| MS.gene72677.t1 | AT1G11310 | 49.148 | 411 | 194 | 5 | 30 | 425 | 8 | 418 | 3.93e-133 | 395 |
| MS.gene72677.t1 | AT2G44110 | 41.633 | 502 | 278 | 7 | 31 | 529 | 7 | 496 | 2.20e-130 | 390 |
| MS.gene72677.t1 | AT1G11310 | 45.682 | 440 | 221 | 5 | 85 | 507 | 1 | 439 | 1.94e-129 | 389 |
| MS.gene72677.t1 | AT2G44110 | 41.468 | 504 | 277 | 9 | 31 | 529 | 7 | 497 | 2.07e-128 | 385 |
| MS.gene72677.t1 | AT4G02600 | 42.236 | 483 | 259 | 8 | 31 | 500 | 9 | 484 | 7.89e-127 | 382 |
| MS.gene72677.t1 | AT4G02600 | 42.236 | 483 | 259 | 8 | 31 | 500 | 9 | 484 | 7.89e-127 | 382 |
| MS.gene72677.t1 | AT4G24250 | 40.580 | 483 | 266 | 7 | 29 | 500 | 6 | 478 | 2.85e-111 | 341 |
| MS.gene72677.t1 | AT5G53760 | 38.912 | 478 | 283 | 7 | 22 | 492 | 8 | 483 | 3.25e-107 | 333 |
| MS.gene72677.t1 | AT5G53760 | 38.912 | 478 | 283 | 7 | 22 | 492 | 8 | 483 | 3.25e-107 | 333 |
| MS.gene72677.t1 | AT1G26700 | 38.703 | 478 | 281 | 8 | 24 | 492 | 4 | 478 | 1.05e-103 | 323 |
| MS.gene72677.t1 | AT1G26700 | 38.703 | 478 | 281 | 8 | 24 | 492 | 4 | 478 | 1.05e-103 | 323 |
| MS.gene72677.t1 | AT4G24250 | 41.730 | 393 | 208 | 7 | 29 | 410 | 6 | 388 | 2.89e-91 | 286 |
| MS.gene72677.t1 | AT1G11000 | 33.902 | 469 | 290 | 8 | 30 | 490 | 9 | 465 | 1.10e-80 | 264 |
| MS.gene72677.t1 | AT1G11000 | 33.902 | 469 | 290 | 8 | 30 | 490 | 9 | 465 | 1.10e-80 | 264 |
| MS.gene72677.t1 | AT1G11000 | 33.416 | 404 | 255 | 6 | 30 | 427 | 9 | 404 | 4.21e-66 | 221 |
Find 107 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACAAGATATATGTTATT+TGG | 0.146379 | 5.4:-15879839 | None:intergenic |
| AACATAATGCTTACAATAAT+TGG | 0.167606 | 5.4:-15879482 | None:intergenic |
| TAATTTGTTGCAGATAATTT+TGG | 0.171828 | 5.4:+15879553 | MS.gene72677:intron |
| GAAAGTGAACTCATCATTAT+TGG | 0.216889 | 5.4:-15880768 | None:intergenic |
| GCCATTATAAAAGTAGCTTT+TGG | 0.241594 | 5.4:+15880051 | MS.gene72677:CDS |
| CAGGATGGCGTACTCCAATA+TGG | 0.262453 | 5.4:+15879447 | MS.gene72677:intron |
| TCTTGTTTGTGTCTCTTCTA+TGG | 0.266325 | 5.4:+15874512 | MS.gene72677:CDS |
| ATTTCACTGTTATTAACTAT+TGG | 0.268067 | 5.4:+15877076 | MS.gene72677:CDS |
| TGGAAATTAAATTTACTTCC+AGG | 0.296007 | 5.4:-15878812 | None:intergenic |
| AGTGCTGTCACAATGCTTCT+TGG | 0.313331 | 5.4:+15877738 | MS.gene72677:CDS |
| GTTTCTCACCATGAATGTTT+AGG | 0.319021 | 5.4:-15879026 | None:intergenic |
| TTCTTGCTCCTAAACATTCA+TGG | 0.336700 | 5.4:+15879018 | MS.gene72677:CDS |
| GACGGGACGCACAATATAAA+AGG | 0.355343 | 5.4:-15878152 | None:intergenic |
| ATACCTGAAACAAAGCAAAA+TGG | 0.358535 | 5.4:-15879721 | None:intergenic |
| GTGCCATTTCTTTAATGCCT+TGG | 0.360439 | 5.4:-15880480 | None:intergenic |
| TACCTTCCTGCTGCATTTGA+AGG | 0.366783 | 5.4:-15877263 | None:intergenic |
| GCTGGAAAATTGTTTCCGTT+TGG | 0.393446 | 5.4:+15880017 | MS.gene72677:CDS |
| AAGGCTCAGATAGATACTTT+TGG | 0.393792 | 5.4:+15879666 | MS.gene72677:CDS |
| CCATGTCCACATAAATATAT+AGG | 0.399986 | 5.4:+15877154 | MS.gene72677:CDS |
| ATTTACTTCCAGGAGCTAGA+TGG | 0.409021 | 5.4:-15878802 | None:intergenic |
| ATTATCTGATAATGAGTTGA+TGG | 0.411205 | 5.4:+15880673 | MS.gene72677:CDS |
| AAGCTAGGAAAATCTACTAT+AGG | 0.415964 | 5.4:+15880527 | MS.gene72677:CDS |
| TAAATCCATTGCGCAAAGTC+TGG | 0.417004 | 5.4:-15878613 | None:intergenic |
| ATCATTAGAAGATGACTTCA+AGG | 0.418712 | 5.4:+15878850 | MS.gene72677:CDS |
| CATCCAAGGCATTAAAGAAA+TGG | 0.418981 | 5.4:+15880477 | MS.gene72677:CDS |
| TCAAGTGATATTAGCAAGAA+TGG | 0.432108 | 5.4:+15879592 | MS.gene72677:CDS |
| GCTTACAATAATTGGAATCA+AGG | 0.442500 | 5.4:-15879474 | None:intergenic |
| ATGAGCAAGAAGCAGAAGAT+AGG | 0.443418 | 5.4:+15880726 | MS.gene72677:CDS |
| GTGCAGATGCTGCAAAATTC+AGG | 0.444314 | 5.4:+15878068 | MS.gene72677:intron |
| GGAATCAAGGATGCCCATAT+TGG | 0.444495 | 5.4:-15879461 | None:intergenic |
| TGAGTTACAAGAGCATATAA+TGG | 0.446195 | 5.4:-15880220 | None:intergenic |
| AAACGGTGAAGTGCTGGTCC+AGG | 0.458690 | 5.4:-15880593 | None:intergenic |
| AGAATATGAGGATGTGTAAC+TGG | 0.460799 | 5.4:-15877689 | None:intergenic |
| CAAGGAATGCCTCTTGTTCA+AGG | 0.463724 | 5.4:+15879647 | MS.gene72677:CDS |
| GTTAGGAAATAGAGAAAAGA+AGG | 0.465297 | 5.4:+15876881 | MS.gene72677:CDS |
| TCAAGGTAGTCGTGGGAGTA+AGG | 0.468406 | 5.4:+15878867 | MS.gene72677:CDS |
| CAATCATGTAGATGGGTTCA+AGG | 0.469472 | 5.4:+15880426 | MS.gene72677:intron |
| ATGGATGGTAGCACCATTGT+TGG | 0.475444 | 5.4:+15880554 | MS.gene72677:CDS |
| GTATAGGTCCATCTAGCTCC+TGG | 0.477053 | 5.4:+15878794 | MS.gene72677:intron |
| ATAGTAAAGTGGAACAAAGT+AGG | 0.485840 | 5.4:+15877194 | MS.gene72677:CDS |
| ATTTGTGAAAACTCTTCTCA+AGG | 0.491258 | 5.4:-15874652 | None:intergenic |
| TGAAGATCGTGTTGAGTGGC+CGG | 0.493387 | 5.4:-15880624 | None:intergenic |
| CTGCAACTGCAAGTGATAGT+AGG | 0.493776 | 5.4:+15874549 | MS.gene72677:CDS |
| ATTATATGCTCTTGTAACTC+AGG | 0.496897 | 5.4:+15880222 | MS.gene72677:CDS |
| AAAACTCTTCTCAAGGGCTA+TGG | 0.499026 | 5.4:-15874645 | None:intergenic |
| CTCCCTCCTTCAAATGCAGC+AGG | 0.503605 | 5.4:+15877257 | MS.gene72677:CDS |
| ATCACTTGCAGTTGCAGCCA+TGG | 0.505471 | 5.4:-15874543 | None:intergenic |
| AACAATGGTGCTACCATCCA+TGG | 0.508522 | 5.4:-15880552 | None:intergenic |
| CTATCTGAGCCTTGAACAAG+AGG | 0.511794 | 5.4:-15879656 | None:intergenic |
| TCCAAATAACATATATCTTG+TGG | 0.513239 | 5.4:+15879838 | MS.gene72677:CDS |
| TGGCAAGCTTATAGTCCAAA+CGG | 0.516392 | 5.4:-15880032 | None:intergenic |
| ATATTCATCTTGTTCGTCAA+AGG | 0.516799 | 5.4:-15880648 | None:intergenic |
| TCACCACCTATATATTTATG+TGG | 0.522982 | 5.4:-15877160 | None:intergenic |
| CTTCTATGGAGGTTTATCCA+TGG | 0.524831 | 5.4:+15874526 | MS.gene72677:CDS |
| TTTAAACAGTCCTGTCCTCT+GGG | 0.526222 | 5.4:+15878981 | MS.gene72677:intron |
| TATGAAATCAAATAGTAAAG+TGG | 0.527640 | 5.4:+15877183 | MS.gene72677:CDS |
| AGGATGGCGTACTCCAATAT+GGG | 0.537615 | 5.4:+15879448 | MS.gene72677:intron |
| GGATCAACAATGCAGTCCCC+TGG | 0.538298 | 5.4:+15880575 | MS.gene72677:CDS |
| AGATACGTGGATGGAAGGAA+TGG | 0.539200 | 5.4:+15877869 | MS.gene72677:intron |
| CACTTGATCAAACACCGACA+TGG | 0.539851 | 5.4:+15874585 | MS.gene72677:CDS |
| CTTCACCGTTTCAAAACTAC+CGG | 0.540316 | 5.4:+15880605 | MS.gene72677:CDS |
| CCTATATATTTATGTGGACA+TGG | 0.544668 | 5.4:-15877154 | None:intergenic |
| TCTGCTTGAAGCTCTAGAAA+AGG | 0.545191 | 5.4:+15876905 | MS.gene72677:CDS |
| CTTCCTGCTGCATTTGAAGG+AGG | 0.545611 | 5.4:-15877260 | None:intergenic |
| AGAAAACTCCCTCTTGAACA+TGG | 0.547069 | 5.4:-15874492 | None:intergenic |
| TTCCTGCTGCATTTGAAGGA+GGG | 0.549958 | 5.4:-15877259 | None:intergenic |
| ACAGCTGATGCCCAGAGGAC+AGG | 0.549959 | 5.4:-15878991 | None:intergenic |
| ACTTGATCAAACACCGACAT+GGG | 0.550596 | 5.4:+15874586 | MS.gene72677:CDS |
| AGACTGCTAGGAAGAATATG+AGG | 0.552334 | 5.4:-15877701 | None:intergenic |
| TAACATATATCTTGTGGACA+TGG | 0.554175 | 5.4:+15879844 | MS.gene72677:CDS |
| TTTGTGAAAACTCTTCTCAA+GGG | 0.555200 | 5.4:-15874651 | None:intergenic |
| GCTCTAGAAAAGGTCAAGGC+TGG | 0.557508 | 5.4:+15876915 | MS.gene72677:CDS |
| TTACAAGAGCATATAATGGA+AGG | 0.557901 | 5.4:-15880216 | None:intergenic |
| AACGGTGAAGTGCTGGTCCA+GGG | 0.561182 | 5.4:-15880592 | None:intergenic |
| TGTTTGTGTCTCTTCTATGG+AGG | 0.561209 | 5.4:+15874515 | MS.gene72677:CDS |
| AAAATCTACTATAGGAACCA+TGG | 0.573041 | 5.4:+15880535 | MS.gene72677:CDS |
| GATACGTGGATGGAAGGAAT+GGG | 0.573280 | 5.4:+15877870 | MS.gene72677:intron |
| ATAAGATGAAGAACTAATTG+AGG | 0.574661 | 5.4:-15879698 | None:intergenic |
| TCTGCAGATACGTGGATGGA+AGG | 0.581567 | 5.4:+15877864 | MS.gene72677:intron |
| AAAACACATGAAAGACTGCT+AGG | 0.587475 | 5.4:-15877713 | None:intergenic |
| CATGGTTATGAGTTCGCCAA+TGG | 0.587616 | 5.4:+15877910 | MS.gene72677:CDS |
| AGATGACTTCAAGGTAGTCG+TGG | 0.587794 | 5.4:+15878859 | MS.gene72677:CDS |
| GAAGATAGGCATCACAGTGA+GGG | 0.593750 | 5.4:+15880740 | MS.gene72677:CDS |
| AGTCCATTCACAGATAAAAG+TGG | 0.595794 | 5.4:-15877663 | None:intergenic |
| TATCTACCTTCAAAAGACAC+TGG | 0.597529 | 5.4:-15877220 | None:intergenic |
| AACATATATCTTGTGGACAT+GGG | 0.598646 | 5.4:+15879845 | MS.gene72677:CDS |
| ATTTGATGAACAAACATCCA+AGG | 0.600958 | 5.4:+15880463 | MS.gene72677:CDS |
| GATTACCAGACTTTGCGCAA+TGG | 0.602153 | 5.4:+15878608 | MS.gene72677:CDS |
| TACAAGAGCATATAATGGAA+GGG | 0.604802 | 5.4:-15880215 | None:intergenic |
| GAAGGGTAATGTAGCTGCAG+AGG | 0.606205 | 5.4:-15880198 | None:intergenic |
| ACGTGGATGGAAGGAATGGG+AGG | 0.615112 | 5.4:+15877873 | MS.gene72677:CDS |
| AATGCTTCTTGGAAGACTCA+AGG | 0.618511 | 5.4:+15877749 | MS.gene72677:CDS |
| TGTTTCTGCAGATACGTGGA+TGG | 0.619092 | 5.4:+15877860 | MS.gene72677:intron |
| GATGACTTCAAGGTAGTCGT+GGG | 0.621529 | 5.4:+15878860 | MS.gene72677:CDS |
| GAGGAAGAGACTTTAACTCA+TGG | 0.624104 | 5.4:+15877892 | MS.gene72677:CDS |
| TCTACTATAGGAACCATGGA+TGG | 0.624164 | 5.4:+15880539 | MS.gene72677:CDS |
| CTCCTTCAAATGCAGCAGGA+AGG | 0.624540 | 5.4:+15877261 | MS.gene72677:CDS |
| ACGGTGAAGTGCTGGTCCAG+GGG | 0.626903 | 5.4:-15880591 | None:intergenic |
| GAGAGACATATAGTTGTACA+AGG | 0.627620 | 5.4:+15879629 | MS.gene72677:CDS |
| AGAAGATAGGCATCACAGTG+AGG | 0.635719 | 5.4:+15880739 | MS.gene72677:CDS |
| TGTCCACATAAATATATAGG+TGG | 0.645928 | 5.4:+15877157 | MS.gene72677:CDS |
| AGGTTGAAGATCGTGTTGAG+TGG | 0.648335 | 5.4:-15880628 | None:intergenic |
| TGAAGCTCTAGAAAAGGTCA+AGG | 0.656136 | 5.4:+15876911 | MS.gene72677:CDS |
| CTTGATCAAACACCGACATG+GGG | 0.671274 | 5.4:+15874587 | MS.gene72677:CDS |
| CTGCATTGTTGATCCAACAA+TGG | 0.691467 | 5.4:-15880567 | None:intergenic |
| ACAGCAGCAACACCCCATGT+CGG | 0.719045 | 5.4:-15874599 | None:intergenic |
| AAACTACAGCTGATGCCCAG+AGG | 0.737888 | 5.4:-15878996 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATATTAATAATAA+GGG | - | chr5.4:15876768-15876787 | None:intergenic | 0.0% |
| !! | TAATAATAATATTAATAATA+AGG | - | chr5.4:15876769-15876788 | None:intergenic | 0.0% |
| !! | TATTATTATTATTATTATTA+GGG | + | chr5.4:15876212-15876231 | MS.gene72677:intron | 0.0% |
| !! | TTATTATTATTATTATTATT+AGG | + | chr5.4:15876211-15876230 | MS.gene72677:intron | 0.0% |
| !! | AAATTATAGAATAGAATTTA+TGG | + | chr5.4:15879319-15879338 | MS.gene72677:intron | 10.0% |
| !! | AATAATTTGATTAATTTCAA+TGG | + | chr5.4:15880151-15880170 | MS.gene72677:intron | 10.0% |
| !! | ATAATTTGATTAATTTCAAT+GGG | + | chr5.4:15880152-15880171 | MS.gene72677:intron | 10.0% |
| !! | TTAAAGTGAAAAATATTTAA+GGG | + | chr5.4:15875617-15875636 | MS.gene72677:intron | 10.0% |
| !!! | ATTTTTTTAAACAAACATTA+AGG | - | chr5.4:15878449-15878468 | None:intergenic | 10.0% |
| !!! | GAACTATAATTTTTATTATA+TGG | - | chr5.4:15879405-15879424 | None:intergenic | 10.0% |
| !!! | TATTTTAGTACTAAATTTTT+TGG | + | chr5.4:15879117-15879136 | MS.gene72677:intron | 10.0% |
| !!! | TTTAAAGTGAAAAATATTTA+AGG | + | chr5.4:15875616-15875635 | MS.gene72677:intron | 10.0% |
| !!! | TTTCACTTTAAATATATTTT+TGG | - | chr5.4:15875608-15875627 | None:intergenic | 10.0% |
| !!! | TTTTTTACTTTTTCATATTT+TGG | + | chr5.4:15875385-15875404 | MS.gene72677:intron | 10.0% |
| !!! | TTTTTTTAAACAAACATTAA+GGG | - | chr5.4:15878448-15878467 | None:intergenic | 10.0% |
| !! | AATTAGCAAAAAATTAAAAG+AGG | - | chr5.4:15878198-15878217 | None:intergenic | 15.0% |
| !! | ACTTTATTATTCAAATATAG+TGG | - | chr5.4:15878940-15878959 | None:intergenic | 15.0% |
| !! | CTTTATTATTCAAATATAGT+GGG | - | chr5.4:15878939-15878958 | None:intergenic | 15.0% |
| !! | TAATATGATGTCTAAAAAAT+TGG | + | chr5.4:15875642-15875661 | MS.gene72677:intron | 15.0% |
| !! | TAATTTGATTAATTTCAATG+GGG | + | chr5.4:15880153-15880172 | MS.gene72677:intron | 15.0% |
| !! | TACAAAAACAATAATATGTA+GGG | - | chr5.4:15876162-15876181 | None:intergenic | 15.0% |
| !! | TATAACTTAATAAGTTTCAT+AGG | - | chr5.4:15879784-15879803 | None:intergenic | 15.0% |
| !! | TTAAGGTATACTAATAATTA+AGG | - | chr5.4:15879878-15879897 | None:intergenic | 15.0% |
| !! | TTACAAAAACAATAATATGT+AGG | - | chr5.4:15876163-15876182 | None:intergenic | 15.0% |
| !! | TTTAAAAAAATACAGAAAGA+TGG | + | chr5.4:15878458-15878477 | MS.gene72677:intron | 15.0% |
| !!! | AAAAGTCAAGAAATTTTTTA+GGG | - | chr5.4:15876330-15876349 | None:intergenic | 15.0% |
| !!! | AATTTTTTAGACATCATATT+AGG | - | chr5.4:15875643-15875662 | None:intergenic | 15.0% |
| !!! | ATATTTAACTTGAAAACTTT+TGG | - | chr5.4:15876358-15876377 | None:intergenic | 15.0% |
| !!! | TAAAAGTCAAGAAATTTTTT+AGG | - | chr5.4:15876331-15876350 | None:intergenic | 15.0% |
| !!! | TATTTAACTTGAAAACTTTT+GGG | - | chr5.4:15876357-15876376 | None:intergenic | 15.0% |
| !!! | TTTAATTTTTTGCTAATTTG+AGG | + | chr5.4:15878200-15878219 | MS.gene72677:intron | 15.0% |
| !!! | TTTGTATGAAATTTTCATAT+TGG | + | chr5.4:15879506-15879525 | MS.gene72677:intron | 15.0% |
| !!! | TTTTGTTAAACATACTATAT+GGG | - | chr5.4:15878665-15878684 | None:intergenic | 15.0% |
| !!! | TTTTTGTTAAACATACTATA+TGG | - | chr5.4:15878666-15878685 | None:intergenic | 15.0% |
| !! | AACATAATGCTTACAATAAT+TGG | - | chr5.4:15879485-15879504 | None:intergenic | 20.0% |
| !! | AGAAACAAAACTTTCATATA+AGG | - | chr5.4:15877847-15877866 | None:intergenic | 20.0% |
| !! | ATTCTTGTATTTCAATTTCA+GGG | + | chr5.4:15878545-15878564 | MS.gene72677:intron | 20.0% |
| !! | ATTTATATGATGTTAAGTGT+TGG | - | chr5.4:15875438-15875457 | None:intergenic | 20.0% |
| !! | ATTTCACTGTTATTAACTAT+TGG | + | chr5.4:15877076-15877095 | MS.gene72677:CDS | 20.0% |
| !! | GAAAAATGTCAAATATGTAT+TGG | - | chr5.4:15875754-15875773 | None:intergenic | 20.0% |
| !! | GAAATTGAAATACAAGAATA+TGG | - | chr5.4:15878544-15878563 | None:intergenic | 20.0% |
| !! | TATAATACACATCAAATAAG+TGG | + | chr5.4:15875918-15875937 | MS.gene72677:intron | 20.0% |
| !! | TATAGAATAGAATTTATGGA+GGG | + | chr5.4:15879323-15879342 | MS.gene72677:intron | 20.0% |
| !! | TATAGATTAGATATACTAGT+TGG | - | chr5.4:15880103-15880122 | None:intergenic | 20.0% |
| !! | TATGAAATCAAATAGTAAAG+TGG | + | chr5.4:15877183-15877202 | MS.gene72677:CDS | 20.0% |
| !! | TATTCTTGTATTTCAATTTC+AGG | + | chr5.4:15878544-15878563 | MS.gene72677:intron | 20.0% |
| !! | TCCTCAAAAAAAAAAGATTA+AGG | - | chr5.4:15879895-15879914 | None:intergenic | 20.0% |
| !! | TTATAGAATAGAATTTATGG+AGG | + | chr5.4:15879322-15879341 | MS.gene72677:intron | 20.0% |
| !! | TTGAAACAAACCTAAAATAT+GGG | - | chr5.4:15875700-15875719 | None:intergenic | 20.0% |
| !! | TTTGTTAAACATACTATATG+GGG | - | chr5.4:15878664-15878683 | None:intergenic | 20.0% |
| !!! | AAAGTCAAGAAATTTTTTAG+GGG | - | chr5.4:15876329-15876348 | None:intergenic | 20.0% |
| !!! | AAGTTGAATTTTTCTTTTAG+TGG | + | chr5.4:15876859-15876878 | MS.gene72677:intron | 20.0% |
| !!! | AATTTTGCTTTACTATTTCA+AGG | - | chr5.4:15875340-15875359 | None:intergenic | 20.0% |
| !!! | ACATTTAGATAAGAGTATTT+TGG | + | chr5.4:15875891-15875910 | MS.gene72677:intron | 20.0% |
| !!! | ACCTTAATCTTTTTTTTTTG+AGG | + | chr5.4:15879891-15879910 | MS.gene72677:intron | 20.0% |
| !!! | ATAAGGGTTAAATATGTTTT+TGG | - | chr5.4:15876752-15876771 | None:intergenic | 20.0% |
| !!! | ATGATCTTTTGATATACTTT+TGG | - | chr5.4:15878835-15878854 | None:intergenic | 20.0% |
| !!! | ATTTAACTTGAAAACTTTTG+GGG | - | chr5.4:15876356-15876375 | None:intergenic | 20.0% |
| !!! | ATTTTTTTGCAGTATTCTTT+TGG | + | chr5.4:15879994-15880013 | MS.gene72677:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | + | chr5.4:15876725-15876744 | MS.gene72677:intron | 20.0% |
| !!! | TAATTGTGTGATTTTATATG+AGG | + | chr5.4:15875065-15875084 | MS.gene72677:intron | 20.0% |
| !!! | TAATTTGTTGCAGATAATTT+TGG | + | chr5.4:15879553-15879572 | MS.gene72677:intron | 20.0% |
| !!! | TAATTTTTATGTCTCTTTGT+CGG | - | chr5.4:15875038-15875057 | None:intergenic | 20.0% |
| !!! | TCAATTTGAAATTAAATGCT+AGG | - | chr5.4:15874839-15874858 | None:intergenic | 20.0% |
| !!! | TCAATTTGTTAAAATCACAA+TGG | - | chr5.4:15877520-15877539 | None:intergenic | 20.0% |
| !!! | TCATTTTTAAATGAAAGAGA+AGG | - | chr5.4:15877306-15877325 | None:intergenic | 20.0% |
| !!! | TTTGAAACAAACCTAAAATA+TGG | - | chr5.4:15875701-15875720 | None:intergenic | 20.0% |
| !!! | TTTTGGATTAATCATTAAAG+TGG | + | chr5.4:15877428-15877447 | MS.gene72677:intron | 20.0% |
| !!! | TTTTGTTTAACAAGTCAAAA+TGG | - | chr5.4:15879198-15879217 | None:intergenic | 20.0% |
| !!! | TTTTTTTGCAGTATTCTTTT+GGG | + | chr5.4:15879995-15880014 | MS.gene72677:intron | 20.0% |
| ! | AAAAAGTTCATGTACTAATG+AGG | - | chr5.4:15875241-15875260 | None:intergenic | 25.0% |
| ! | AAAGAAAAATTCAACTTGTG+AGG | - | chr5.4:15876856-15876875 | None:intergenic | 25.0% |
| ! | AAATGAAAGAGAAGGAAAAA+AGG | - | chr5.4:15877298-15877317 | None:intergenic | 25.0% |
| ! | ACATTCTTAGTTGAGTTATA+TGG | + | chr5.4:15879050-15879069 | MS.gene72677:intron | 25.0% |
| ! | AGGTTGGAAAAAAAAATAGA+GGG | + | chr5.4:15876694-15876713 | MS.gene72677:intron | 25.0% |
| ! | ATAAACTGAGTTGTACTTAT+AGG | + | chr5.4:15876185-15876204 | MS.gene72677:intron | 25.0% |
| ! | ATAAGATGAAGAACTAATTG+AGG | - | chr5.4:15879701-15879720 | None:intergenic | 25.0% |
| ! | ATAGACATTATAAGCATATG+AGG | - | chr5.4:15878035-15878054 | None:intergenic | 25.0% |
| ! | ATCAATGTTAAAACTATGTC+TGG | - | chr5.4:15875121-15875140 | None:intergenic | 25.0% |
| ! | ATTATTTATGAGAGACTTGT+AGG | + | chr5.4:15875858-15875877 | MS.gene72677:intron | 25.0% |
| ! | ATTTCGGCAAAAACTAAATT+TGG | + | chr5.4:15877474-15877493 | MS.gene72677:intron | 25.0% |
| ! | GATCAACATTGTATATTGTA+TGG | + | chr5.4:15878908-15878927 | MS.gene72677:intron | 25.0% |
| ! | GTCCTTATTAAAGCAAAATA+AGG | - | chr5.4:15879245-15879264 | None:intergenic | 25.0% |
| ! | TATAATGTTTGTTTAAGTCC+TGG | + | chr5.4:15878263-15878282 | MS.gene72677:intron | 25.0% |
| ! | TATATGTAACAAATCCATGA+TGG | - | chr5.4:15878247-15878266 | None:intergenic | 25.0% |
| ! | TATGATGTCTAAAAAATTGG+AGG | + | chr5.4:15875645-15875664 | MS.gene72677:intron | 25.0% |
| ! | TCAAGTTAAATATGATTGTG+TGG | + | chr5.4:15876365-15876384 | MS.gene72677:intron | 25.0% |
| ! | TCAATGTTAAAACTATGTCT+GGG | - | chr5.4:15875120-15875139 | None:intergenic | 25.0% |
| ! | TCCAAAAATAGTAAATCCTT+TGG | - | chr5.4:15876953-15876972 | None:intergenic | 25.0% |
| ! | TCCAAATAACATATATCTTG+TGG | + | chr5.4:15879838-15879857 | MS.gene72677:CDS | 25.0% |
| ! | TCCACAAGATATATGTTATT+TGG | - | chr5.4:15879842-15879861 | None:intergenic | 25.0% |
| ! | TGAAACAAACCTAAAATATG+GGG | - | chr5.4:15875699-15875718 | None:intergenic | 25.0% |
| ! | TGGAAATTAAATTTACTTCC+AGG | - | chr5.4:15878815-15878834 | None:intergenic | 25.0% |
| ! | TGTTGAAGATTTGATCTTAA+AGG | - | chr5.4:15875511-15875530 | None:intergenic | 25.0% |
| ! | TTAAAGAAGGAAGGTAAATA+TGG | - | chr5.4:15878769-15878788 | None:intergenic | 25.0% |
| ! | TTACTAGTAGTAAAACAACA+TGG | - | chr5.4:15874813-15874832 | None:intergenic | 25.0% |
| ! | TTAGTCAATGTTCAAGATTA+AGG | - | chr5.4:15879926-15879945 | None:intergenic | 25.0% |
| ! | TTTGAACATACACATATTTG+AGG | + | chr5.4:15877547-15877566 | MS.gene72677:intron | 25.0% |
| ! | TTTGAACTCATATATACCAT+TGG | - | chr5.4:15877929-15877948 | None:intergenic | 25.0% |
| !! | ACCAAAGGATTTACTATTTT+TGG | + | chr5.4:15876949-15876968 | MS.gene72677:intron | 25.0% |
| !! | AGAGTTCATATAATTTTGAG+TGG | - | chr5.4:15876557-15876576 | None:intergenic | 25.0% |
| !! | ATTATCTGATAATGAGTTGA+TGG | + | chr5.4:15880673-15880692 | MS.gene72677:CDS | 25.0% |
| !! | CCATTATAAAAGTAGCTTTT+GGG | + | chr5.4:15880052-15880071 | MS.gene72677:CDS | 25.0% |
| !! | CGATTTGAAACTCTTAAAAT+TGG | + | chr5.4:15876443-15876462 | MS.gene72677:intron | 25.0% |
| !! | GAATTTTTCTTTTAGTGGTT+AGG | + | chr5.4:15876864-15876883 | MS.gene72677:intron | 25.0% |
| !! | GTTGTTCCACTAAATATTTT+GGG | + | chr5.4:15874950-15874969 | MS.gene72677:intron | 25.0% |
| !! | TTAGGTTTGTTTCAAAACTT+TGG | + | chr5.4:15875705-15875724 | MS.gene72677:intron | 25.0% |
| !! | TTGATTTTATCAAACCATCA+TGG | + | chr5.4:15878230-15878249 | MS.gene72677:intron | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | + | chr5.4:15876724-15876743 | MS.gene72677:intron | 25.0% |
| !!! | GAATAATAAAGTGCTGAATT+TGG | + | chr5.4:15878948-15878967 | MS.gene72677:intron | 25.0% |
| !!! | GTCCTTATTTTGCTTTAATA+AGG | + | chr5.4:15879240-15879259 | MS.gene72677:intron | 25.0% |
| !!! | TAGTTGAATTTTTTTGACAC+AGG | + | chr5.4:15875997-15876016 | MS.gene72677:intron | 25.0% |
| !!! | TGATTTTATTTGAAGCATGT+AGG | + | chr5.4:15875148-15875167 | MS.gene72677:intron | 25.0% |
| !!! | TTTACAGAGTTGATGATTTT+AGG | + | chr5.4:15877049-15877068 | MS.gene72677:intron | 25.0% |
| AAAATCTACTATAGGAACCA+TGG | + | chr5.4:15880535-15880554 | MS.gene72677:CDS | 30.0% | |
| AAACAATAATATGTAGGGAC+CGG | - | chr5.4:15876157-15876176 | None:intergenic | 30.0% | |
| AACATATATCTTGTGGACAT+GGG | + | chr5.4:15879845-15879864 | MS.gene72677:CDS | 30.0% | |
| AAGAAAGAAAATGAGTAGAC+AGG | - | chr5.4:15876520-15876539 | None:intergenic | 30.0% | |
| AAGAAGCTACTAGAATTGAT+GGG | - | chr5.4:15877613-15877632 | None:intergenic | 30.0% | |
| AAGCTAGGAAAATCTACTAT+AGG | + | chr5.4:15880527-15880546 | MS.gene72677:CDS | 30.0% | |
| ACATTGAATCGCTGAAATTT+CGG | + | chr5.4:15877458-15877477 | MS.gene72677:intron | 30.0% | |
| AGAAAGAAAATGAGTAGACA+GGG | - | chr5.4:15876519-15876538 | None:intergenic | 30.0% | |
| AGGACTAAACTTAAAATTCG+TGG | - | chr5.4:15879225-15879244 | None:intergenic | 30.0% | |
| AGTAGATATTCTATGAAGCA+CGG | - | chr5.4:15880358-15880377 | None:intergenic | 30.0% | |
| AGTAGTAAAACAACATGGAA+GGG | - | chr5.4:15874808-15874827 | None:intergenic | 30.0% | |
| ATACCTGAAACAAAGCAAAA+TGG | - | chr5.4:15879724-15879743 | None:intergenic | 30.0% | |
| ATAGTAAAGTGGAACAAAGT+AGG | + | chr5.4:15877194-15877213 | MS.gene72677:CDS | 30.0% | |
| ATATTCATCTTGTTCGTCAA+AGG | - | chr5.4:15880651-15880670 | None:intergenic | 30.0% | |
| ATCATTAGAAGATGACTTCA+AGG | + | chr5.4:15878850-15878869 | MS.gene72677:CDS | 30.0% | |
| ATCCAAAATACACTTCTAGT+AGG | - | chr5.4:15877416-15877435 | None:intergenic | 30.0% | |
| ATCCAAGTTAACTGGTTATA+GGG | + | chr5.4:15877633-15877652 | MS.gene72677:intron | 30.0% | |
| ATTATATGCTCTTGTAACTC+AGG | + | chr5.4:15880222-15880241 | MS.gene72677:CDS | 30.0% | |
| ATTGATCACAATCATGTAGA+TGG | + | chr5.4:15880418-15880437 | MS.gene72677:intron | 30.0% | |
| ATTTCACTACCAATCAAGTT+AGG | + | chr5.4:15875555-15875574 | MS.gene72677:intron | 30.0% | |
| ATTTGATGAACAAACATCCA+AGG | + | chr5.4:15880463-15880482 | MS.gene72677:CDS | 30.0% | |
| ATTTGTGAAAACTCTTCTCA+AGG | - | chr5.4:15874655-15874674 | None:intergenic | 30.0% | |
| CAAACAAACACCTAAAATGA+GGG | + | chr5.4:15876636-15876655 | MS.gene72677:intron | 30.0% | |
| CATATAATACACCAAATGGT+GGG | + | chr5.4:15878374-15878393 | MS.gene72677:intron | 30.0% | |
| CATTCTTAAATGTGAAGAAG+TGG | + | chr5.4:15876112-15876131 | MS.gene72677:intron | 30.0% | |
| CCATGTCCACATAAATATAT+AGG | + | chr5.4:15877154-15877173 | MS.gene72677:CDS | 30.0% | |
| CCTATATATTTATGTGGACA+TGG | - | chr5.4:15877157-15877176 | None:intergenic | 30.0% | |
| CTTTAAGCCTACAAATGTAT+TGG | - | chr5.4:15874985-15875004 | None:intergenic | 30.0% | |
| GAAAGTGAACTCATCATTAT+TGG | - | chr5.4:15880771-15880790 | None:intergenic | 30.0% | |
| GAGGTTGGAAAAAAAAATAG+AGG | + | chr5.4:15876693-15876712 | MS.gene72677:intron | 30.0% | |
| GCTTACAATAATTGGAATCA+AGG | - | chr5.4:15879477-15879496 | None:intergenic | 30.0% | |
| GTCACTAAAACAATGACTTT+AGG | - | chr5.4:15875671-15875690 | None:intergenic | 30.0% | |
| GTGTCACGATTTATTCAAAT+CGG | - | chr5.4:15876414-15876433 | None:intergenic | 30.0% | |
| GTTAGGAAATAGAGAAAAGA+AGG | + | chr5.4:15876881-15876900 | MS.gene72677:CDS | 30.0% | |
| GTTTGTTTCAAAACTTTGGA+TGG | + | chr5.4:15875709-15875728 | MS.gene72677:intron | 30.0% | |
| TAACATATATCTTGTGGACA+TGG | + | chr5.4:15879844-15879863 | MS.gene72677:CDS | 30.0% | |
| TAAGAAGCTACTAGAATTGA+TGG | - | chr5.4:15877614-15877633 | None:intergenic | 30.0% | |
| TAGTAGTAAAACAACATGGA+AGG | - | chr5.4:15874809-15874828 | None:intergenic | 30.0% | |
| TATCCAAGTTAACTGGTTAT+AGG | + | chr5.4:15877632-15877651 | MS.gene72677:intron | 30.0% | |
| TCAAAAAATGTGGTTGCTTA+AGG | - | chr5.4:15875964-15875983 | None:intergenic | 30.0% | |
| TCAAGTGATATTAGCAAGAA+TGG | + | chr5.4:15879592-15879611 | MS.gene72677:CDS | 30.0% | |
| TCACCACCTATATATTTATG+TGG | - | chr5.4:15877163-15877182 | None:intergenic | 30.0% | |
| TCCAAAATACACTTCTAGTA+GGG | - | chr5.4:15877415-15877434 | None:intergenic | 30.0% | |
| TGTAATTATATGTGTCGTGT+CGG | + | chr5.4:15880280-15880299 | MS.gene72677:intron | 30.0% | |
| TGTCACGATTTATTCAAATC+GGG | - | chr5.4:15876413-15876432 | None:intergenic | 30.0% | |
| TGTCCACATAAATATATAGG+TGG | + | chr5.4:15877157-15877176 | MS.gene72677:CDS | 30.0% | |
| TTATCATAGACTTGAAGAGT+TGG | - | chr5.4:15876983-15877002 | None:intergenic | 30.0% | |
| TTGATCACAATCATGTAGAT+GGG | + | chr5.4:15880419-15880438 | MS.gene72677:intron | 30.0% | |
| TTTGTGAAAACTCTTCTCAA+GGG | - | chr5.4:15874654-15874673 | None:intergenic | 30.0% | |
| ! | AAGTGGTGATAGAAAACTTT+TGG | + | chr5.4:15876664-15876683 | MS.gene72677:intron | 30.0% |
| ! | AGTGGTGATAGAAAACTTTT+GGG | + | chr5.4:15876665-15876684 | MS.gene72677:intron | 30.0% |
| ! | ATTTTTGTGCCTAACTTGAT+TGG | - | chr5.4:15875567-15875586 | None:intergenic | 30.0% |
| ! | CAGCTTTGTGAAACAATTTA+AGG | - | chr5.4:15877354-15877373 | None:intergenic | 30.0% |
| ! | CTGGTAAGAATTTTTACCAA+AGG | + | chr5.4:15876934-15876953 | MS.gene72677:intron | 30.0% |
| ! | GAGAAGAGTTTTCACAAATT+AGG | + | chr5.4:15874656-15874675 | MS.gene72677:CDS | 30.0% |
| ! | GAGTTTTCACAAATTAGGAA+CGG | + | chr5.4:15874661-15874680 | MS.gene72677:CDS | 30.0% |
| ! | GCCATTATAAAAGTAGCTTT+TGG | + | chr5.4:15880051-15880070 | MS.gene72677:CDS | 30.0% |
| ! | GCTAATCCGATATAATTTTC+AGG | + | chr5.4:15879428-15879447 | MS.gene72677:intron | 30.0% |
| ! | GGTTGTTCCACTAAATATTT+TGG | + | chr5.4:15874949-15874968 | MS.gene72677:intron | 30.0% |
| ! | TACAAGAGCATATAATGGAA+GGG | - | chr5.4:15880218-15880237 | None:intergenic | 30.0% |
| ! | TGAGTTACAAGAGCATATAA+TGG | - | chr5.4:15880223-15880242 | None:intergenic | 30.0% |
| ! | TTACAAGAGCATATAATGGA+AGG | - | chr5.4:15880219-15880238 | None:intergenic | 30.0% |
| ! | TTGTCAATTAGTTTAGTGCT+TGG | + | chr5.4:15876082-15876101 | MS.gene72677:intron | 30.0% |
| !! | AACTTACTACTAGAAGTACT+TGG | + | chr5.4:15877374-15877393 | MS.gene72677:intron | 30.0% |
| !! | ATCCGATATAATTTTCAGGA+TGG | + | chr5.4:15879432-15879451 | MS.gene72677:intron | 30.0% |
| !! | CAACACACTTAATTTTCAAG+AGG | - | chr5.4:15875188-15875207 | None:intergenic | 30.0% |
| !! | GCTTCTTTAGACAGTTTTAT+AGG | + | chr5.4:15878570-15878589 | MS.gene72677:CDS | 30.0% |
| !! | TCAGATAGATACTTTTGGTT+AGG | + | chr5.4:15879671-15879690 | MS.gene72677:CDS | 30.0% |
| !! | TCATACAAGTTTTTGGACTA+GGG | + | chr5.4:15878120-15878139 | MS.gene72677:CDS | 30.0% |
| !! | TTCCACTAAATATTTTGGGA+GGG | + | chr5.4:15874954-15874973 | MS.gene72677:intron | 30.0% |
| !!! | AACCACATTTTTTGAATGGA+GGG | + | chr5.4:15875969-15875988 | MS.gene72677:intron | 30.0% |
| !!! | AAGCAACCACATTTTTTGAA+TGG | + | chr5.4:15875965-15875984 | MS.gene72677:intron | 30.0% |
| !!! | CCCAAAAGCTACTTTTATAA+TGG | - | chr5.4:15880055-15880074 | None:intergenic | 30.0% |
| !!! | TATCCATTTTGCTTTGTTTC+AGG | + | chr5.4:15879718-15879737 | MS.gene72677:CDS | 30.0% |
| !!! | TGGATTTTAGTTGTTCTCAT+TGG | - | chr5.4:15880083-15880102 | None:intergenic | 30.0% |
| AAAACACATGAAAGACTGCT+AGG | - | chr5.4:15877716-15877735 | None:intergenic | 35.0% | |
| AACAAACCTAAAATATGGGG+AGG | - | chr5.4:15875696-15875715 | None:intergenic | 35.0% | |
| AACAATAATATGTAGGGACC+GGG | - | chr5.4:15876156-15876175 | None:intergenic | 35.0% | |
| AATAGAATTTATGGAGGGAC+AGG | + | chr5.4:15879328-15879347 | MS.gene72677:intron | 35.0% | |
| AGAATATGAGGATGTGTAAC+TGG | - | chr5.4:15877692-15877711 | None:intergenic | 35.0% | |
| AGCTTCTTATCCAAGTTAAC+TGG | + | chr5.4:15877625-15877644 | MS.gene72677:intron | 35.0% | |
| AGTCCATTCACAGATAAAAG+TGG | - | chr5.4:15877666-15877685 | None:intergenic | 35.0% | |
| ATAGAATTTATGGAGGGACA+GGG | + | chr5.4:15879329-15879348 | MS.gene72677:intron | 35.0% | |
| ATGCTAGTGCTACATTTGAA+AGG | - | chr5.4:15875776-15875795 | None:intergenic | 35.0% | |
| CCAAACAAACACCTAAAATG+AGG | + | chr5.4:15876635-15876654 | MS.gene72677:intron | 35.0% | |
| CGCCATCCTGAAAATTATAT+CGG | - | chr5.4:15879437-15879456 | None:intergenic | 35.0% | |
| CTAAAATGAGGGATCAAAAG+TGG | + | chr5.4:15876647-15876666 | MS.gene72677:intron | 35.0% | |
| GAGAAGGAAAAAAGGAAACA+TGG | - | chr5.4:15877290-15877309 | None:intergenic | 35.0% | |
| GAGAGACATATAGTTGTACA+AGG | + | chr5.4:15879629-15879648 | MS.gene72677:CDS | 35.0% | |
| GCATATAATACACCAAATGG+TGG | + | chr5.4:15878373-15878392 | MS.gene72677:intron | 35.0% | |
| GCTGCATATAATACACCAAA+TGG | + | chr5.4:15878370-15878389 | MS.gene72677:intron | 35.0% | |
| GTCACGATTTATTCAAATCG+GGG | - | chr5.4:15876412-15876431 | None:intergenic | 35.0% | |
| GTTTCTCACCATGAATGTTT+AGG | - | chr5.4:15879029-15879048 | None:intergenic | 35.0% | |
| TATCTACCTTCAAAAGACAC+TGG | - | chr5.4:15877223-15877242 | None:intergenic | 35.0% | |
| TTAATTTCAATGGGGTTTGC+AGG | + | chr5.4:15880161-15880180 | MS.gene72677:intron | 35.0% | |
| TTCCCTCCATTCAAAAAATG+TGG | - | chr5.4:15875974-15875993 | None:intergenic | 35.0% | |
| TTCTTGCTCCTAAACATTCA+TGG | + | chr5.4:15879018-15879037 | MS.gene72677:CDS | 35.0% | |
| ! | AAAAAGAGGCATGTAAAGCT+AGG | + | chr5.4:15880512-15880531 | MS.gene72677:CDS | 35.0% |
| ! | AAGGCTCAGATAGATACTTT+TGG | + | chr5.4:15879666-15879685 | MS.gene72677:CDS | 35.0% |
| ! | ATAATTTGTGATCCGAAACC+CGG | + | chr5.4:15876135-15876154 | MS.gene72677:intron | 35.0% |
| ! | CACTTTTGATCCCTCATTTT+AGG | - | chr5.4:15876649-15876668 | None:intergenic | 35.0% |
| ! | CATCCAAGGCATTAAAGAAA+TGG | + | chr5.4:15880477-15880496 | MS.gene72677:CDS | 35.0% |
| ! | GTGGTGATAGAAAACTTTTG+GGG | + | chr5.4:15876666-15876685 | MS.gene72677:intron | 35.0% |
| ! | TCAGAGCTCATACAAGTTTT+TGG | + | chr5.4:15878113-15878132 | MS.gene72677:CDS | 35.0% |
| ! | TCTTGTTTGTGTCTCTTCTA+TGG | + | chr5.4:15874512-15874531 | MS.gene72677:CDS | 35.0% |
| ! | TGATGCATGACATTTTTACG+AGG | - | chr5.4:15878511-15878530 | None:intergenic | 35.0% |
| !! | CAAGACAATTTGTTATGCCA+CGG | - | chr5.4:15874874-15874893 | None:intergenic | 35.0% |
| !! | CCTCATTTTAGGTGTTTGTT+TGG | - | chr5.4:15876638-15876657 | None:intergenic | 35.0% |
| !! | CTCATACAAGTTTTTGGACT+AGG | + | chr5.4:15878119-15878138 | MS.gene72677:CDS | 35.0% |
| !! | GAACCACTTTTATCTGTGAA+TGG | + | chr5.4:15877660-15877679 | MS.gene72677:CDS | 35.0% |
| !! | GTTCCACTAAATATTTTGGG+AGG | + | chr5.4:15874953-15874972 | MS.gene72677:intron | 35.0% |
| !! | TCACGTTTTGTTGGAAATCA+AGG | - | chr5.4:15876600-15876619 | None:intergenic | 35.0% |
| !!! | CAACCACATTTTTTGAATGG+AGG | + | chr5.4:15875968-15875987 | MS.gene72677:intron | 35.0% |
| !!! | TTGCAGATAATTTTGGCTGT+TGG | + | chr5.4:15879560-15879579 | MS.gene72677:intron | 35.0% |
| AAAACTCTTCTCAAGGGCTA+TGG | - | chr5.4:15874648-15874667 | None:intergenic | 40.0% | |
| AACAAACATTAAGGGCAACC+CGG | - | chr5.4:15878440-15878459 | None:intergenic | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | + | chr5.4:15878342-15878361 | MS.gene72677:intron | 40.0% | |
| AATGCTTCTTGGAAGACTCA+AGG | + | chr5.4:15877749-15877768 | MS.gene72677:CDS | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | + | chr5.4:15878343-15878362 | MS.gene72677:intron | 40.0% | |
| ACTTGATCAAACACCGACAT+GGG | + | chr5.4:15874586-15874605 | MS.gene72677:CDS | 40.0% | |
| AGAAACCAGATTAGCAAGAC+GGG | - | chr5.4:15878172-15878191 | None:intergenic | 40.0% | |
| AGACTGCTAGGAAGAATATG+AGG | - | chr5.4:15877704-15877723 | None:intergenic | 40.0% | |
| AGCCTACAAATGTATTGGAC+CGG | - | chr5.4:15874980-15874999 | None:intergenic | 40.0% | |
| ATGAGCAAGAAGCAGAAGAT+AGG | + | chr5.4:15880726-15880745 | MS.gene72677:CDS | 40.0% | |
| ATTTACTTCCAGGAGCTAGA+TGG | - | chr5.4:15878805-15878824 | None:intergenic | 40.0% | |
| ATTTCTGCCAAACTAGCACA+AGG | - | chr5.4:15879160-15879179 | None:intergenic | 40.0% | |
| CGTGTTACAATTTCTGTGCA+TGG | - | chr5.4:15876485-15876504 | None:intergenic | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | + | chr5.4:15878348-15878367 | MS.gene72677:intron | 40.0% | |
| CTGCATTGTTGATCCAACAA+TGG | - | chr5.4:15880570-15880589 | None:intergenic | 40.0% | |
| CTTCACCGTTTCAAAACTAC+CGG | + | chr5.4:15880605-15880624 | MS.gene72677:CDS | 40.0% | |
| CTTCTATGGAGGTTTATCCA+TGG | + | chr5.4:15874526-15874545 | MS.gene72677:CDS | 40.0% | |
| GAGAAACCAGATTAGCAAGA+CGG | - | chr5.4:15878173-15878192 | None:intergenic | 40.0% | |
| GAGGAAGAGACTTTAACTCA+TGG | + | chr5.4:15877892-15877911 | MS.gene72677:CDS | 40.0% | |
| GAGGGACTAAAACGAAAAGT+TGG | + | chr5.4:15876712-15876731 | MS.gene72677:intron | 40.0% | |
| GCTGGAAAATTGTTTCCGTT+TGG | + | chr5.4:15880017-15880036 | MS.gene72677:CDS | 40.0% | |
| GTCATGTGACTGAAAAGTCA+CGG | + | chr5.4:15878305-15878324 | MS.gene72677:intron | 40.0% | |
| GTCCCTATAACCAGTTAACT+TGG | - | chr5.4:15877638-15877657 | None:intergenic | 40.0% | |
| TAAATCCATTGCGCAAAGTC+TGG | - | chr5.4:15878616-15878635 | None:intergenic | 40.0% | |
| TAGGTGTTTGTTTGGATGTG+CGG | - | chr5.4:15876630-15876649 | None:intergenic | 40.0% | |
| TATGAAGCACGGACAATCTT+CGG | - | chr5.4:15880347-15880366 | None:intergenic | 40.0% | |
| TCATGTGACTGAAAAGTCAC+GGG | + | chr5.4:15878306-15878325 | MS.gene72677:intron | 40.0% | |
| TCTACTATAGGAACCATGGA+TGG | + | chr5.4:15880539-15880558 | MS.gene72677:CDS | 40.0% | |
| TGGCAAGCTTATAGTCCAAA+CGG | - | chr5.4:15880035-15880054 | None:intergenic | 40.0% | |
| TGTTTGTGTCTCTTCTATGG+AGG | + | chr5.4:15874515-15874534 | MS.gene72677:CDS | 40.0% | |
| TTTAAACAGTCCTGTCCTCT+GGG | + | chr5.4:15878981-15879000 | MS.gene72677:intron | 40.0% | |
| ! | AGGAAACCAGTGTCTTTTGA+AGG | + | chr5.4:15877214-15877233 | MS.gene72677:CDS | 40.0% |
| ! | ATCTAGGAGGCGCAAATTTA+TGG | + | chr5.4:15879360-15879379 | MS.gene72677:intron | 40.0% |
| ! | ATTGAAGTTTTCTCTTGCCG+TGG | + | chr5.4:15874854-15874873 | MS.gene72677:intron | 40.0% |
| ! | CAATCATGTAGATGGGTTCA+AGG | + | chr5.4:15880426-15880445 | MS.gene72677:intron | 40.0% |
| ! | CTTACCCTGTTTTACACAAG+AGG | - | chr5.4:15878350-15878369 | None:intergenic | 40.0% |
| ! | GTGCTAGTTTGGCAGAAATT+TGG | + | chr5.4:15879161-15879180 | MS.gene72677:intron | 40.0% |
| ! | TCTAGGAGGCGCAAATTTAT+GGG | + | chr5.4:15879361-15879380 | MS.gene72677:intron | 40.0% |
| ! | TTTGCAGTATTCTTTTGGGC+TGG | + | chr5.4:15879999-15880018 | MS.gene72677:intron | 40.0% |
| ! | TTTGGAGCTTCGCAAAATCA+CGG | + | chr5.4:15877492-15877511 | MS.gene72677:intron | 40.0% |
| ! | TTTTAAACAGTCCTGTCCTC+TGG | + | chr5.4:15878980-15878999 | MS.gene72677:intron | 40.0% |
| !! | ACTAAATATTTTGGGAGGGC+CGG | + | chr5.4:15874958-15874977 | MS.gene72677:intron | 40.0% |
| !! | AGAAAACTTTTGGGGACTAG+AGG | + | chr5.4:15876674-15876693 | MS.gene72677:intron | 40.0% |
| !! | GCATGTAGGACATTGATTTG+TGG | + | chr5.4:15875162-15875181 | MS.gene72677:intron | 40.0% |
| !! | GCCCTACTAGAAGTGTATTT+TGG | + | chr5.4:15877411-15877430 | MS.gene72677:intron | 40.0% |
| !! | GTGCCATTTCTTTAATGCCT+TGG | - | chr5.4:15880483-15880502 | None:intergenic | 40.0% |
| !! | TCTGCTTGAAGCTCTAGAAA+AGG | + | chr5.4:15876905-15876924 | MS.gene72677:CDS | 40.0% |
| !! | TGAAGCTCTAGAAAAGGTCA+AGG | + | chr5.4:15876911-15876930 | MS.gene72677:CDS | 40.0% |
| !!! | GTTTTGTTTCTGCAGATACG+TGG | + | chr5.4:15877856-15877875 | MS.gene72677:intron | 40.0% |
| AAAGTCACGGGTTCAAGTCA+TGG | + | chr5.4:15878318-15878337 | MS.gene72677:intron | 45.0% | |
| AATATGTAGGGACCGGGTTT+CGG | - | chr5.4:15876150-15876169 | None:intergenic | 45.0% | |
| AGAAGATAGGCATCACAGTG+AGG | + | chr5.4:15880739-15880758 | MS.gene72677:CDS | 45.0% | |
| AGATACGTGGATGGAAGGAA+TGG | + | chr5.4:15877869-15877888 | MS.gene72677:intron | 45.0% | |
| AGATGACTTCAAGGTAGTCG+TGG | + | chr5.4:15878859-15878878 | MS.gene72677:CDS | 45.0% | |
| AGGATGGCGTACTCCAATAT+GGG | + | chr5.4:15879448-15879467 | MS.gene72677:intron | 45.0% | |
| AGGTTGAAGATCGTGTTGAG+TGG | - | chr5.4:15880631-15880650 | None:intergenic | 45.0% | |
| AGTGCTGTCACAATGCTTCT+TGG | + | chr5.4:15877738-15877757 | MS.gene72677:CDS | 45.0% | |
| ATGGATGGTAGCACCATTGT+TGG | + | chr5.4:15880554-15880573 | MS.gene72677:CDS | 45.0% | |
| CAAGGAATGCCTCTTGTTCA+AGG | + | chr5.4:15879647-15879666 | MS.gene72677:CDS | 45.0% | |
| CACTTGATCAAACACCGACA+TGG | + | chr5.4:15874585-15874604 | MS.gene72677:CDS | 45.0% | |
| CAGGGAGAACTAAATCTAGG+AGG | + | chr5.4:15879347-15879366 | MS.gene72677:intron | 45.0% | |
| CATGGTTATGAGTTCGCCAA+TGG | + | chr5.4:15877910-15877929 | MS.gene72677:CDS | 45.0% | |
| CTATCTGAGCCTTGAACAAG+AGG | - | chr5.4:15879659-15879678 | None:intergenic | 45.0% | |
| CTGCAACTGCAAGTGATAGT+AGG | + | chr5.4:15874549-15874568 | MS.gene72677:CDS | 45.0% | |
| CTTGATCAAACACCGACATG+GGG | + | chr5.4:15874587-15874606 | MS.gene72677:CDS | 45.0% | |
| GAAGATAGGCATCACAGTGA+GGG | + | chr5.4:15880740-15880759 | MS.gene72677:CDS | 45.0% | |
| GACGGGACGCACAATATAAA+AGG | - | chr5.4:15878155-15878174 | None:intergenic | 45.0% | |
| GATACGTGGATGGAAGGAAT+GGG | + | chr5.4:15877870-15877889 | MS.gene72677:intron | 45.0% | |
| GATGACTTCAAGGTAGTCGT+GGG | + | chr5.4:15878860-15878879 | MS.gene72677:CDS | 45.0% | |
| GATTACCAGACTTTGCGCAA+TGG | + | chr5.4:15878608-15878627 | MS.gene72677:CDS | 45.0% | |
| GGAATCAAGGATGCCCATAT+TGG | - | chr5.4:15879464-15879483 | None:intergenic | 45.0% | |
| GGACAGGGAGAACTAAATCT+AGG | + | chr5.4:15879344-15879363 | MS.gene72677:intron | 45.0% | |
| GGCACATGACTGTGAAAAAG+AGG | + | chr5.4:15880498-15880517 | MS.gene72677:CDS | 45.0% | |
| GGCCCTCCCAAAATATTTAG+TGG | - | chr5.4:15874959-15874978 | None:intergenic | 45.0% | |
| GTGCAGATGCTGCAAAATTC+AGG | + | chr5.4:15878068-15878087 | MS.gene72677:intron | 45.0% | |
| TACCTTCCTGCTGCATTTGA+AGG | - | chr5.4:15877266-15877285 | None:intergenic | 45.0% | |
| TAGCACTCCTTGTGCTAGTT+TGG | + | chr5.4:15879150-15879169 | MS.gene72677:intron | 45.0% | |
| TTCCTGCTGCATTTGAAGGA+GGG | - | chr5.4:15877262-15877281 | None:intergenic | 45.0% | |
| TTCTGCAACAACAATTGCGC+AGG | - | chr5.4:15878691-15878710 | None:intergenic | 45.0% | |
| ! | GTTTTATAGGTCTGTGCGCA+AGG | + | chr5.4:15878583-15878602 | MS.gene72677:CDS | 45.0% |
| ! | TATATGTGTCGTGTCGGTGT+CGG | + | chr5.4:15880286-15880305 | MS.gene72677:intron | 45.0% |
| ! | TGACAGCCTCCCCATATTTT+AGG | + | chr5.4:15875687-15875706 | MS.gene72677:intron | 45.0% |
| ! | TGTTTCTGCAGATACGTGGA+TGG | + | chr5.4:15877860-15877879 | MS.gene72677:intron | 45.0% |
| !! | AACAATGGTGCTACCATCCA+TGG | - | chr5.4:15880555-15880574 | None:intergenic | 45.0% |
| !! | AACTTTTGGGGACTAGAGGT+TGG | + | chr5.4:15876678-15876697 | MS.gene72677:intron | 45.0% |
| !! | TAGCACAAGGAGTGCTAGAA+CGG | - | chr5.4:15879147-15879166 | None:intergenic | 45.0% |
| !!! | AGTGGCCGGTAGTTTTGAAA+CGG | - | chr5.4:15880613-15880632 | None:intergenic | 45.0% |
| !!! | GTTTTGAAACGGTGAAGTGC+TGG | - | chr5.4:15880602-15880621 | None:intergenic | 45.0% |
| !! | AATTATTATTATGAAATAAA+GGG | - | chr5.4:15874927-15874946 | None:intergenic | 5.0% |
| !! | TAATTATTATTATGAAATAA+AGG | - | chr5.4:15874928-15874947 | None:intergenic | 5.0% |
| !! | TTATTTCATAATAATAATTA+TGG | + | chr5.4:15874928-15874947 | MS.gene72677:intron | 5.0% |
| AAACTACAGCTGATGCCCAG+AGG | - | chr5.4:15878999-15879018 | None:intergenic | 50.0% | |
| ACAACTTTACCAGTTGCGCC+AGG | - | chr5.4:15878284-15878303 | None:intergenic | 50.0% | |
| ATCACTTGCAGTTGCAGCCA+TGG | - | chr5.4:15874546-15874565 | None:intergenic | 50.0% | |
| CAGGATGGCGTACTCCAATA+TGG | + | chr5.4:15879447-15879466 | MS.gene72677:intron | 50.0% | |
| CTCCTTCAAATGCAGCAGGA+AGG | + | chr5.4:15877261-15877280 | MS.gene72677:CDS | 50.0% | |
| CTTCCTGCTGCATTTGAAGG+AGG | - | chr5.4:15877263-15877282 | None:intergenic | 50.0% | |
| GAAGGGTAATGTAGCTGCAG+AGG | - | chr5.4:15880201-15880220 | None:intergenic | 50.0% | |
| GGCCGGTCCAATACATTTGT+AGG | + | chr5.4:15874975-15874994 | MS.gene72677:intron | 50.0% | |
| TCAAGGTAGTCGTGGGAGTA+AGG | + | chr5.4:15878867-15878886 | MS.gene72677:CDS | 50.0% | |
| TCGGGGCACAATTTGAAGAG+CGG | - | chr5.4:15876395-15876414 | None:intergenic | 50.0% | |
| TCTGCAGATACGTGGATGGA+AGG | + | chr5.4:15877864-15877883 | MS.gene72677:intron | 50.0% | |
| TGAAGATCGTGTTGAGTGGC+CGG | - | chr5.4:15880627-15880646 | None:intergenic | 50.0% | |
| TGTTTAAGTCCTGGCGCAAC+TGG | + | chr5.4:15878272-15878291 | MS.gene72677:intron | 50.0% | |
| ! | CTTTTACGCTGACACAGCTG+CGG | + | chr5.4:15878721-15878740 | MS.gene72677:intron | 50.0% |
| ! | GGCTGCAACTCACGTTTTGT+TGG | - | chr5.4:15876609-15876628 | None:intergenic | 50.0% |
| ! | GTATAGGTCCATCTAGCTCC+TGG | + | chr5.4:15878794-15878813 | MS.gene72677:intron | 50.0% |
| !! | GCTCTAGAAAAGGTCAAGGC+TGG | + | chr5.4:15876915-15876934 | MS.gene72677:CDS | 50.0% |
| ACACGACATGTGTCCGACAC+TGG | + | chr5.4:15880309-15880328 | MS.gene72677:intron | 55.0% | |
| ACAGCAGCAACACCCCATGT+CGG | - | chr5.4:15874602-15874621 | None:intergenic | 55.0% | |
| ACGTGGATGGAAGGAATGGG+AGG | + | chr5.4:15877873-15877892 | MS.gene72677:CDS | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr5.4:15878414-15878433 | None:intergenic | 55.0% | |
| ATGTGTCCGACACTGGGACA+CGG | + | chr5.4:15880316-15880335 | MS.gene72677:intron | 55.0% | |
| CACGACATGTGTCCGACACT+GGG | + | chr5.4:15880310-15880329 | MS.gene72677:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr5.4:15878413-15878432 | None:intergenic | 55.0% | |
| CTCCCTCCTTCAAATGCAGC+AGG | + | chr5.4:15877257-15877276 | MS.gene72677:CDS | 55.0% | |
| GGATCAACAATGCAGTCCCC+TGG | + | chr5.4:15880575-15880594 | MS.gene72677:CDS | 55.0% | |
| TGCGTCCCGTCTTGCTAATC+TGG | + | chr5.4:15878164-15878183 | MS.gene72677:intron | 55.0% | |
| ! | CAAATGGTGGGACTCCTTCC+CGG | + | chr5.4:15878386-15878405 | MS.gene72677:intron | 55.0% |
| ! | GATTAGCCGTGTCCCAGTGT+CGG | - | chr5.4:15880325-15880344 | None:intergenic | 55.0% |
| !! | AAACGGTGAAGTGCTGGTCC+AGG | - | chr5.4:15880596-15880615 | None:intergenic | 55.0% |
| !! | AACGGTGAAGTGCTGGTCCA+GGG | - | chr5.4:15880595-15880614 | None:intergenic | 55.0% |
| ACAGCTGATGCCCAGAGGAC+AGG | - | chr5.4:15878994-15879013 | None:intergenic | 60.0% | |
| CGGGAAGGAGTCCCACCATT+TGG | - | chr5.4:15878388-15878407 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr5.4:15878401-15878420 | MS.gene72677:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr5.4:15878402-15878421 | MS.gene72677:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr5.4:15878418-15878437 | MS.gene72677:intron | 60.0% |
| !! | ACGGTGAAGTGCTGGTCCAG+GGG | - | chr5.4:15880594-15880613 | None:intergenic | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr5.4:15878403-15878422 | None:intergenic | 65.0% | |
| CGCTGACACAGCTGCGGTTG+TGG | + | chr5.4:15878727-15878746 | MS.gene72677:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr5.4:15878407-15878426 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr5.4:15878408-15878427 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr5.4:15878419-15878438 | MS.gene72677:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 15874494 | 15880820 | 15874494 | ID=MS.gene72677 |
| chr5.4 | mRNA | 15874494 | 15880820 | 15874494 | ID=MS.gene72677.t1;Parent=MS.gene72677 |
| chr5.4 | exon | 15874494 | 15874682 | 15874494 | ID=MS.gene72677.t1.exon1;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15874494 | 15874682 | 15874494 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15876879 | 15876936 | 15876879 | ID=MS.gene72677.t1.exon2;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15876879 | 15876936 | 15876879 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15877056 | 15877282 | 15877056 | ID=MS.gene72677.t1.exon3;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15877056 | 15877282 | 15877056 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15877654 | 15877770 | 15877654 | ID=MS.gene72677.t1.exon4;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15877654 | 15877770 | 15877654 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15877871 | 15877931 | 15877871 | ID=MS.gene72677.t1.exon5;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15877871 | 15877931 | 15877871 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15878074 | 15878162 | 15878074 | ID=MS.gene72677.t1.exon6;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15878074 | 15878162 | 15878074 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15878566 | 15878640 | 15878566 | ID=MS.gene72677.t1.exon7;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15878566 | 15878640 | 15878566 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15878800 | 15878888 | 15878800 | ID=MS.gene72677.t1.exon8;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15878800 | 15878888 | 15878800 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15878990 | 15879039 | 15878990 | ID=MS.gene72677.t1.exon9;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15878990 | 15879039 | 15878990 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15879450 | 15879490 | 15879450 | ID=MS.gene72677.t1.exon10;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15879450 | 15879490 | 15879450 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15879566 | 15879739 | 15879566 | ID=MS.gene72677.t1.exon11;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15879566 | 15879739 | 15879566 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15879831 | 15879866 | 15879831 | ID=MS.gene72677.t1.exon12;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15879831 | 15879866 | 15879831 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15880006 | 15880073 | 15880006 | ID=MS.gene72677.t1.exon13;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15880006 | 15880073 | 15880006 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15880183 | 15880243 | 15880183 | ID=MS.gene72677.t1.exon14;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15880183 | 15880243 | 15880183 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| chr5.4 | exon | 15880437 | 15880820 | 15880437 | ID=MS.gene72677.t1.exon15;Parent=MS.gene72677.t1 |
| chr5.4 | CDS | 15880437 | 15880820 | 15880437 | ID=cds.MS.gene72677.t1;Parent=MS.gene72677.t1 |
| Gene Sequence |
| Protein sequence |
