Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73249.t1 | XP_013454909.1 | 87.9 | 1056 | 61 | 6 | 20 | 1009 | 1 | 1055 | 0.00E+00 | 1775.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73249.t1 | A0A072UH12 | 87.9 | 1056 | 61 | 6 | 20 | 1009 | 1 | 1055 | 0.0e+00 | 1775.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene73249 | 0.804354 | 2.25E-49 | -1.69E-46 |
| MS.gene049989 | MS.gene73249 | 0.810254 | 1.26E-50 | -1.69E-46 |
| MS.gene050297 | MS.gene73249 | 0.849986 | 2.27E-60 | -1.69E-46 |
| MS.gene054643 | MS.gene73249 | 0.808985 | 2.37E-50 | -1.69E-46 |
| MS.gene055411 | MS.gene73249 | 0.811288 | 7.55E-51 | -1.69E-46 |
| MS.gene06057 | MS.gene73249 | 0.829442 | 5.14E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73249.t1 | MTR_4g019490 | 86.269 | 1056 | 78 | 8 | 20 | 1009 | 1 | 1055 | 0.0 | 1738 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73249.t1 | AT3G56870 | 36.437 | 247 | 139 | 4 | 764 | 1001 | 449 | 686 | 2.97e-36 | 147 |
| MS.gene73249.t1 | AT3G56870 | 36.437 | 247 | 139 | 4 | 764 | 1001 | 449 | 686 | 2.97e-36 | 147 |
Find 216 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATAATATCTTCACCTTTC+TGG | 0.145004 | 4.1:-78773780 | None:intergenic |
| CTGGTTGACAATAACCTTTC+AGG | 0.180532 | 4.1:-78773761 | None:intergenic |
| CCATTGAAACAATCACTTTC+AGG | 0.184542 | 4.1:-78772198 | None:intergenic |
| GTCCTTCACGCACTTCTTCT+TGG | 0.229242 | 4.1:-78772055 | None:intergenic |
| AATTTGCTTGAGTGTTAAAA+TGG | 0.242009 | 4.1:-78771851 | None:intergenic |
| CAACCGTTTCTGTAAAATAA+TGG | 0.260670 | 4.1:+78775407 | MS.gene73249:CDS |
| GATTGCTTCGCGTCGTATTC+AGG | 0.264672 | 4.1:-78773638 | None:intergenic |
| TAGAAGTGGTTCCAATCTTC+AGG | 0.268920 | 4.1:+78774563 | MS.gene73249:CDS |
| GATTGCTTCTCCTCGTATTC+AGG | 0.275509 | 4.1:-78773401 | None:intergenic |
| GAACCACTTCTAGAAGTCTT+TGG | 0.283608 | 4.1:-78774552 | None:intergenic |
| TTCTCGTTCAGCAACTCATC+TGG | 0.283858 | 4.1:+78774608 | MS.gene73249:CDS |
| TACAGATGGGGCTGAGGTTC+AGG | 0.286950 | 4.1:+78773544 | MS.gene73249:CDS |
| GAATTCAATGAAGGAAATTA+TGG | 0.314322 | 4.1:+78774731 | MS.gene73249:CDS |
| TGGTCAACTGGCACAATCTC+TGG | 0.323664 | 4.1:-78772093 | None:intergenic |
| GACGGTGAAGCCATCTGATA+TGG | 0.327031 | 4.1:+78773055 | MS.gene73249:CDS |
| AAAGTGCTTTGTACATTTGC+TGG | 0.333385 | 4.1:+78771341 | MS.gene73249:CDS |
| ACTCAATCCTGATGGGTATC+TGG | 0.335210 | 4.1:+78773358 | MS.gene73249:CDS |
| TATCCTCTCACCATCATATA+AGG | 0.338463 | 4.1:-78773669 | None:intergenic |
| TCTTTATCACTAGCCACTTC+AGG | 0.338632 | 4.1:-78773215 | None:intergenic |
| GCCGCCCACGAGATACATTA+AGG | 0.344571 | 4.1:-78771612 | None:intergenic |
| AAATCATGATTAGCCACTTT+AGG | 0.356101 | 4.1:-78773470 | None:intergenic |
| AGGTCTTCAAATTCAATTGC+AGG | 0.365169 | 4.1:-78773131 | None:intergenic |
| CAAGAGTTCTGGCCCTCTAA+TGG | 0.369261 | 4.1:+78772678 | MS.gene73249:CDS |
| TAAAGTGGCTAATCATGATT+TGG | 0.369451 | 4.1:+78773472 | MS.gene73249:CDS |
| TACTAGACGGTCAAGAGTTC+TGG | 0.376214 | 4.1:+78772667 | MS.gene73249:CDS |
| ATCTCTTCTGACTGGTCAAC+TGG | 0.383847 | 4.1:-78772105 | None:intergenic |
| CAATCAAATTTAACTTCAAC+AGG | 0.389678 | 4.1:-78772354 | None:intergenic |
| CAATCAAATTTAACTTCAAC+AGG | 0.389678 | 4.1:-78772534 | None:intergenic |
| CAATCAAATTTAACTTCAAC+AGG | 0.389678 | 4.1:-78772714 | None:intergenic |
| ATTCCCTTTCACTTAGATTC+TGG | 0.394907 | 4.1:-78775695 | None:intergenic |
| CACAAGATGTAGTGCGTAAA+GGG | 0.398113 | 4.1:+78775594 | MS.gene73249:CDS |
| AGCAGCTGAATCTCCATTAG+AGG | 0.400043 | 4.1:-78772691 | None:intergenic |
| CAACCTCATCATCCATGTTA+TGG | 0.404621 | 4.1:-78771810 | None:intergenic |
| ACGAGAAGAATTACGAATCT+TGG | 0.404681 | 4.1:-78774592 | None:intergenic |
| CCTGAAAGTGATTGTTTCAA+TGG | 0.407091 | 4.1:+78772198 | MS.gene73249:CDS |
| CTTGGAAGCGCCCTGAAGAT+TGG | 0.409102 | 4.1:-78774574 | None:intergenic |
| GGTCAACTAGCGCAATCTCT+TGG | 0.410909 | 4.1:-78772452 | None:intergenic |
| GGTCAACTAGCGCAATCTCT+TGG | 0.410909 | 4.1:-78772632 | None:intergenic |
| GGCCATTTCACCATCTTCTC+AGG | 0.413736 | 4.1:+78773860 | MS.gene73249:intron |
| CAATCTCTTGGGAGGACATT+GGG | 0.416373 | 4.1:-78772800 | None:intergenic |
| CTGAGAGTCTCCATGAAATC+AGG | 0.417726 | 4.1:-78771997 | None:intergenic |
| AGAAGATGATCCTGATTTCA+TGG | 0.417890 | 4.1:+78771987 | MS.gene73249:CDS |
| GTCAACTAGCACAGCCTCTT+GGG | 0.424538 | 4.1:-78772271 | None:intergenic |
| ATTGAGTCCATGTTCGTTAG+TGG | 0.429000 | 4.1:-78773342 | None:intergenic |
| CGTCAACTAGCACAATCTCT+TGG | 0.430970 | 4.1:-78772812 | None:intergenic |
| TCTCGTTCAGCAACTCATCT+GGG | 0.432277 | 4.1:+78774609 | MS.gene73249:CDS |
| TTCCTGAGAAGATGGTGAAA+TGG | 0.433301 | 4.1:-78773862 | None:intergenic |
| TGAAAACTGAACCTGATGTT+TGG | 0.434144 | 4.1:+78771755 | MS.gene73249:CDS |
| ATGTGGTCTTCCGGGGATGA+TGG | 0.434540 | 4.1:-78771949 | None:intergenic |
| TTTGCTGGGTCAGACACTTA+AGG | 0.436772 | 4.1:+78771356 | MS.gene73249:CDS |
| CATTATATCAAAACTTTCAA+AGG | 0.436866 | 4.1:+78771571 | MS.gene73249:CDS |
| GTGGAAAGCTGTGCCAGGTT+AGG | 0.441663 | 4.1:+78775645 | MS.gene73249:CDS |
| GGTCAACTAGCACAGCCTCT+TGG | 0.443518 | 4.1:-78772272 | None:intergenic |
| TCTTTAGTTTCCTTATATGA+TGG | 0.444730 | 4.1:+78773659 | MS.gene73249:CDS |
| TCTCCACCGGAACAGTCATC+TGG | 0.447529 | 4.1:-78772402 | None:intergenic |
| AGATCTTGACTCTGTAGGTC+TGG | 0.447645 | 4.1:+78773235 | MS.gene73249:CDS |
| TCATCACATGCCCAAACATC+AGG | 0.456881 | 4.1:-78771766 | None:intergenic |
| ATGAGTTCCCACCGTCTAGC+GGG | 0.457156 | 4.1:+78772859 | MS.gene73249:CDS |
| AATAAGCCAGATGACTGTTC+TGG | 0.460970 | 4.1:+78772936 | MS.gene73249:CDS |
| GATGGGCCAGATGATTGTTC+CGG | 0.462161 | 4.1:+78772576 | MS.gene73249:CDS |
| TCTCTACCGGAACAGTCATC+TGG | 0.463906 | 4.1:-78772762 | None:intergenic |
| GTCTTCTTTACTTTCTCTAC+CGG | 0.465887 | 4.1:-78772235 | None:intergenic |
| GTCTTCTTTACTTTCTCTAC+CGG | 0.465887 | 4.1:-78772775 | None:intergenic |
| CAATCTCTTGGGAAGACATT+GGG | 0.467063 | 4.1:-78772440 | None:intergenic |
| GTCAACTAGCGCAATCTCTT+GGG | 0.468261 | 4.1:-78772451 | None:intergenic |
| GTCAACTAGCGCAATCTCTT+GGG | 0.468261 | 4.1:-78772631 | None:intergenic |
| TTTCAAAGGTGGGTTTGTTA+CGG | 0.471550 | 4.1:+78771585 | MS.gene73249:CDS |
| GCCACTTCAGGTGGTGAGAC+TGG | 0.473358 | 4.1:-78773203 | None:intergenic |
| GGTCAACTGGCACAATCTCT+GGG | 0.479196 | 4.1:-78772092 | None:intergenic |
| GGTCAAGAGTTCTCGCCCTC+TGG | 0.481474 | 4.1:+78772315 | MS.gene73249:CDS |
| GAAAACTGAACCTGATGTTT+GGG | 0.483915 | 4.1:+78771756 | MS.gene73249:CDS |
| GTCTTCTTTACTTTCTCTAC+CGG | 0.484612 | 4.1:-78772595 | None:intergenic |
| GATGGGCCAGATGACTGTTC+CGG | 0.484615 | 4.1:+78772396 | MS.gene73249:CDS |
| CCTCAATCCGGATGGATGTC+CGG | 0.485013 | 4.1:+78773595 | MS.gene73249:CDS |
| CAGCCTCTTGGGAAGACATT+GGG | 0.486265 | 4.1:-78772260 | None:intergenic |
| CCTTTACGCACTACATCTTG+TGG | 0.489160 | 4.1:-78775593 | None:intergenic |
| CCCTCTAGTGGAGATTCAGC+TGG | 0.490020 | 4.1:+78772150 | MS.gene73249:CDS |
| GTCAACTAGCACAATCTCTT+GGG | 0.491340 | 4.1:-78772811 | None:intergenic |
| GTCTTCTTTACTTTCTCCAC+CGG | 0.491799 | 4.1:-78772415 | None:intergenic |
| GATGGGCCAGATGACTGTTC+CGG | 0.493004 | 4.1:+78772756 | MS.gene73249:CDS |
| AGAATGAATTAAATAACAAA+TGG | 0.493400 | 4.1:+78773006 | MS.gene73249:CDS |
| TATATCAAAACTTTCAAAGG+TGG | 0.497940 | 4.1:+78771574 | MS.gene73249:CDS |
| ATATCAAAACTTTCAAAGGT+GGG | 0.498052 | 4.1:+78771575 | MS.gene73249:CDS |
| ACCAATGTCATCATCACCTT+CGG | 0.498819 | 4.1:-78773432 | None:intergenic |
| TCCATGTTCGTTAGTGGCGC+AGG | 0.500439 | 4.1:-78773336 | None:intergenic |
| AGACGAACCGGACATCCATC+CGG | 0.502544 | 4.1:-78773602 | None:intergenic |
| ACTAGTCTCACCACCTAAAG+TGG | 0.502741 | 4.1:+78773457 | MS.gene73249:CDS |
| TCTCTACCAGAACAGTCATC+TGG | 0.503206 | 4.1:-78772942 | None:intergenic |
| TCTCTACCGGAACAATCATC+TGG | 0.506732 | 4.1:-78772582 | None:intergenic |
| CAAGAGTTCTCGCCCTCTGG+TGG | 0.510126 | 4.1:+78772318 | MS.gene73249:CDS |
| GATGACTACAACGCTCCATT+CGG | 0.510540 | 4.1:-78771546 | None:intergenic |
| CAAGAGTTCTCGCCCTCTAG+TGG | 0.517498 | 4.1:+78772498 | MS.gene73249:CDS |
| CGTCTAGTATCTCTTCTGAT+TGG | 0.517639 | 4.1:-78772293 | None:intergenic |
| CGTCTAGTATCTCTTCTGAT+TGG | 0.517639 | 4.1:-78772473 | None:intergenic |
| CGTCTAGTATCTCTTCTGAT+TGG | 0.517639 | 4.1:-78772653 | None:intergenic |
| CCACAAGATGTAGTGCGTAA+AGG | 0.518359 | 4.1:+78775593 | MS.gene73249:CDS |
| CTGAAAGTGATTGTTTCAAT+GGG | 0.519366 | 4.1:+78772199 | MS.gene73249:CDS |
| GAATCGTCAGAGAGACGAAC+CGG | 0.520134 | 4.1:-78773614 | None:intergenic |
| AATGGGCAAGATGACTGTTC+CGG | 0.521162 | 4.1:+78772216 | MS.gene73249:CDS |
| AAAAGAGTTGAATTCAATGA+AGG | 0.523260 | 4.1:+78774722 | MS.gene73249:CDS |
| AAGATCATGCATTGATGTAA+TGG | 0.524697 | 4.1:+78771720 | MS.gene73249:CDS |
| TACTGAACAAGGCCTCAATC+CGG | 0.527531 | 4.1:+78773583 | MS.gene73249:CDS |
| ACAATCTCTTGGGAGGACAT+TGG | 0.535240 | 4.1:-78772801 | None:intergenic |
| CCGGACATCCATCCGGATTG+AGG | 0.536667 | 4.1:-78773595 | None:intergenic |
| GCATCACCATTCTTATCAGT+CGG | 0.537879 | 4.1:-78774465 | None:intergenic |
| AGCAGGTGGAAAGCTGTGCC+AGG | 0.538818 | 4.1:+78775640 | MS.gene73249:CDS |
| AAGTGCTTTGTACATTTGCT+GGG | 0.540248 | 4.1:+78771342 | MS.gene73249:CDS |
| ACAATCTCTGGGGAGGACAT+TGG | 0.541056 | 4.1:-78772081 | None:intergenic |
| AGAAGTGGTTCCAATCTTCA+GGG | 0.542550 | 4.1:+78774564 | MS.gene73249:CDS |
| TACAACGCTCCATTCGGCCT+AGG | 0.543426 | 4.1:-78771540 | None:intergenic |
| TGAATCTACAGATGGGGCTG+AGG | 0.543709 | 4.1:+78773538 | MS.gene73249:CDS |
| CAAGAGTTCTCACCCTCTAG+TGG | 0.545884 | 4.1:+78772138 | MS.gene73249:CDS |
| ATTGAGGCCTTGTTCAGTAG+TGG | 0.547060 | 4.1:-78773579 | None:intergenic |
| CCTGAAAATGATTGTTCCGA+TGG | 0.549174 | 4.1:+78772378 | MS.gene73249:CDS |
| CCTGAAAATGATTGTTCCGA+TGG | 0.549174 | 4.1:+78772558 | MS.gene73249:CDS |
| TCTCTGGGGAGGACATTGGC+TGG | 0.551231 | 4.1:-78772077 | None:intergenic |
| ATAGCATTCGCTGATGAAGC+AGG | 0.553372 | 4.1:+78775623 | MS.gene73249:CDS |
| GCAATCTCTTGGGAAGACAT+TGG | 0.553704 | 4.1:-78772441 | None:intergenic |
| TCCTGCGCCACTAACGAACA+TGG | 0.554632 | 4.1:+78773335 | MS.gene73249:CDS |
| TTGCAGGAAAGCTTGCAGAC+TGG | 0.556193 | 4.1:-78773115 | None:intergenic |
| CTCTGCTCCACTACTGAACA+AGG | 0.558590 | 4.1:+78773572 | MS.gene73249:CDS |
| AAGGTTATTGTCAACCAGAA+AGG | 0.559038 | 4.1:+78773766 | MS.gene73249:CDS |
| CATGTCAAACCTAGGCCGAA+TGG | 0.559584 | 4.1:+78771531 | MS.gene73249:CDS |
| CGACAAACCAGATACCCATC+AGG | 0.561270 | 4.1:-78773365 | None:intergenic |
| TGCATTGATGTAATGGAGGA+AGG | 0.561397 | 4.1:+78771727 | MS.gene73249:CDS |
| ACAGCCTCTTGGGAAGACAT+TGG | 0.562222 | 4.1:-78772261 | None:intergenic |
| GTGGCTGTCTTTCATGTCAA+GGG | 0.562488 | 4.1:+78775380 | MS.gene73249:CDS |
| ATAATAATTTCAGAATGCAA+AGG | 0.563309 | 4.1:+78774423 | MS.gene73249:intron |
| ACCAGTCTCACCACCTGAAG+TGG | 0.563854 | 4.1:+78773202 | MS.gene73249:CDS |
| GGAAAAGCTCTGCAAAGCCA+TGG | 0.566566 | 4.1:+78773881 | MS.gene73249:CDS |
| CATCCTCATAGAACCTAACC+TGG | 0.568751 | 4.1:-78775658 | None:intergenic |
| GATAAAGATCTTGACTCTGT+AGG | 0.568827 | 4.1:+78773230 | MS.gene73249:CDS |
| ACTGATATCAACGGTCTCCA+TGG | 0.569844 | 4.1:-78773898 | None:intergenic |
| TGAGAGGATACATGTTAAAG+AGG | 0.569994 | 4.1:+78773682 | MS.gene73249:CDS |
| GATGGCTTCACCGTCTGTAG+TGG | 0.570139 | 4.1:-78773047 | None:intergenic |
| GAACATGGACTCAATCCTGA+TGG | 0.572883 | 4.1:+78773350 | MS.gene73249:CDS |
| TTTCCTTATATGATGGTGAG+AGG | 0.575102 | 4.1:+78773666 | MS.gene73249:CDS |
| GAAATTCTCATGTCAAACCT+AGG | 0.575558 | 4.1:+78771523 | MS.gene73249:CDS |
| ATTCCAAAGACTTCTAGAAG+TGG | 0.576866 | 4.1:+78774549 | MS.gene73249:CDS |
| CAAAGCTGCATGGTCCTGAA+AGG | 0.577844 | 4.1:+78773747 | MS.gene73249:CDS |
| AAGCAATCATTTGCTTCCGA+AGG | 0.579054 | 4.1:+78773416 | MS.gene73249:CDS |
| AGTAAAGATGAATCTACAGA+TGG | 0.580743 | 4.1:+78773530 | MS.gene73249:CDS |
| AAGCTGAAGAAGGTGCAAAA+CGG | 0.581103 | 4.1:+78775358 | MS.gene73249:CDS |
| TAGGTTCTATGAGGATGATG+AGG | 0.581252 | 4.1:+78775664 | MS.gene73249:CDS |
| GCTGAATCCCCGCTAGACGG+TGG | 0.582447 | 4.1:-78772867 | None:intergenic |
| GTAAAGATGAATCTACAGAT+GGG | 0.582960 | 4.1:+78773531 | MS.gene73249:CDS |
| GGTGGCTGTCTTTCATGTCA+AGG | 0.583391 | 4.1:+78775379 | MS.gene73249:CDS |
| ATCATCCCCGGAAGACCACA+TGG | 0.585503 | 4.1:+78771951 | MS.gene73249:CDS |
| GAAGTCCTTAATGTATCTCG+TGG | 0.587088 | 4.1:+78771607 | MS.gene73249:CDS |
| CATGAGTTCCCACCGTCTAG+CGG | 0.587867 | 4.1:+78772858 | MS.gene73249:CDS |
| GCAGTTCTCGAAACAACACC+AGG | 0.587990 | 4.1:-78774495 | None:intergenic |
| GTGCCAGGTTAGGTTCTATG+AGG | 0.588042 | 4.1:+78775655 | MS.gene73249:CDS |
| TCATGATTAGCCACTTTAGG+TGG | 0.588900 | 4.1:-78773467 | None:intergenic |
| ATAAGAATGGTGATGCAGAA+AGG | 0.589346 | 4.1:+78774472 | MS.gene73249:CDS |
| CTGAATCCCCGCTAGACGGT+GGG | 0.592771 | 4.1:-78772866 | None:intergenic |
| AATGCTACAAAAGCTGAAGA+AGG | 0.593465 | 4.1:+78775348 | MS.gene73249:CDS |
| AGCAGCTGAATCTCCACTAG+AGG | 0.594731 | 4.1:-78772511 | None:intergenic |
| CTCGTTCAGCAACTCATCTG+GGG | 0.595242 | 4.1:+78774610 | MS.gene73249:CDS |
| CGTCTAGTATCTCTTCTGAC+TGG | 0.598364 | 4.1:-78772113 | None:intergenic |
| TGGAGGTGAAGAACTACTGT+CGG | 0.599354 | 4.1:-78775552 | None:intergenic |
| AGGAAGAGAAAACGCTCACA+AGG | 0.601064 | 4.1:+78771892 | MS.gene73249:CDS |
| TTAAAGATAGCTGCAAAGCA+AGG | 0.601950 | 4.1:+78771872 | MS.gene73249:CDS |
| AATCCATAACATGGATGATG+AGG | 0.603932 | 4.1:+78771807 | MS.gene73249:CDS |
| ACCAGCTGAATCTCCACTAG+AGG | 0.604502 | 4.1:-78772151 | None:intergenic |
| ATAACAATATCCATATCAGA+TGG | 0.610792 | 4.1:-78773065 | None:intergenic |
| AATGGTGATGCAGAAAGGCC+TGG | 0.611927 | 4.1:+78774477 | MS.gene73249:CDS |
| GAACAAGGCCTCAATCCGGA+TGG | 0.614300 | 4.1:+78773587 | MS.gene73249:CDS |
| ACAGAGCCGACTGATAAGAA+TGG | 0.616463 | 4.1:+78774459 | MS.gene73249:CDS |
| ACACAGAAATAACTCTAGAG+TGG | 0.616610 | 4.1:+78772976 | MS.gene73249:CDS |
| GCAGCTGAATCCCCGCTAGA+CGG | 0.618610 | 4.1:-78772870 | None:intergenic |
| GGAACAATCATCTGGCCCAT+CGG | 0.619544 | 4.1:-78772574 | None:intergenic |
| GCAGCTGAATCTCCATTAGA+GGG | 0.619622 | 4.1:-78772690 | None:intergenic |
| GGAACAGTCATCTGGCCCAT+CGG | 0.620743 | 4.1:-78772394 | None:intergenic |
| GGAACAGTCATCTGGCCCAT+CGG | 0.621661 | 4.1:-78772754 | None:intergenic |
| GCAGCTGAATCTCCACCAGA+GGG | 0.621917 | 4.1:-78772330 | None:intergenic |
| AACTGGCACAATCTCTGGGG+AGG | 0.623394 | 4.1:-78772088 | None:intergenic |
| GACCAAGAAGAAGTGCGTGA+AGG | 0.623863 | 4.1:+78772053 | MS.gene73249:CDS |
| CCACCCAATGTCTTCCCAAG+AGG | 0.624646 | 4.1:+78772257 | MS.gene73249:CDS |
| CCTCTTGGGAAGACATTGGG+TGG | 0.626302 | 4.1:-78772257 | None:intergenic |
| TGTTCAGACAATCCATAACA+TGG | 0.627170 | 4.1:+78771798 | MS.gene73249:CDS |
| GGGCCAGATGACTGTTCCGG+TGG | 0.627810 | 4.1:+78772399 | MS.gene73249:CDS |
| AACATGGACTCAATCCTGAT+GGG | 0.628467 | 4.1:+78773351 | MS.gene73249:CDS |
| ATCATGCATTGATGTAATGG+AGG | 0.629058 | 4.1:+78771723 | MS.gene73249:CDS |
| AACTAGCACAATCTCTTGGG+AGG | 0.629465 | 4.1:-78772808 | None:intergenic |
| TCTCTTGGGAAGACATTGAG+TGG | 0.629798 | 4.1:-78772617 | None:intergenic |
| TCTCTTGGGAAGACATTGGG+TGG | 0.630023 | 4.1:-78772437 | None:intergenic |
| TTATCACTAGCCACTTCAGG+TGG | 0.631593 | 4.1:-78773212 | None:intergenic |
| TCCTTAATGTATCTCGTGGG+CGG | 0.631765 | 4.1:+78771611 | MS.gene73249:CDS |
| AGCAGCTGAATCTCCACCAG+AGG | 0.633262 | 4.1:-78772331 | None:intergenic |
| GTTTCTATGACTGATATCAA+CGG | 0.636051 | 4.1:-78773907 | None:intergenic |
| GCAGCTGAATCTCCACTAGA+GGG | 0.637008 | 4.1:-78772510 | None:intergenic |
| CATAACATGGATGATGAGGT+TGG | 0.640089 | 4.1:+78771811 | MS.gene73249:CDS |
| CCAGCTGAATCTCCACTAGA+GGG | 0.640640 | 4.1:-78772150 | None:intergenic |
| AGTGAAGATGAATATACAGC+TGG | 0.641533 | 4.1:+78773293 | MS.gene73249:CDS |
| CTGAAAATGATTGTTCCGAT+GGG | 0.641922 | 4.1:+78772379 | MS.gene73249:CDS |
| CTGAAAATGATTGTTCCGAT+GGG | 0.641922 | 4.1:+78772559 | MS.gene73249:CDS |
| TGAGTTCCCACCGTCTAGCG+GGG | 0.643923 | 4.1:+78772860 | MS.gene73249:CDS |
| AACATGGATGATGAGGTTGG+TGG | 0.652716 | 4.1:+78771814 | MS.gene73249:CDS |
| GAAGGTAGTTCAAAGCTGCA+TGG | 0.654248 | 4.1:+78773737 | MS.gene73249:CDS |
| AGGTTCTATGAGGATGATGA+GGG | 0.655810 | 4.1:+78775665 | MS.gene73249:CDS |
| TCTCTTGGGAGGACATTGGG+TGG | 0.657225 | 4.1:-78772797 | None:intergenic |
| AGATGATTCACCTGAATACG+AGG | 0.657273 | 4.1:+78773391 | MS.gene73249:CDS |
| ACTTCTTGTGATGAACATGA+AGG | 0.664199 | 4.1:+78773719 | MS.gene73249:CDS |
| TAAAGATGAATCTACAGATG+GGG | 0.666951 | 4.1:+78773532 | MS.gene73249:CDS |
| CAATCAGAAGAGATACTAGA+CGG | 0.667769 | 4.1:+78772294 | MS.gene73249:CDS |
| CAATCAGAAGAGATACTAGA+CGG | 0.667769 | 4.1:+78772474 | MS.gene73249:CDS |
| CAATCAGAAGAGATACTAGA+CGG | 0.667769 | 4.1:+78772654 | MS.gene73249:CDS |
| GCATTCGCTGATGAAGCAGG+TGG | 0.668767 | 4.1:+78775626 | MS.gene73249:CDS |
| TTACGCACTACATCTTGTGG+AGG | 0.669959 | 4.1:-78775590 | None:intergenic |
| GAATCTGAAGAGATACTAGA+CGG | 0.671927 | 4.1:+78772834 | MS.gene73249:CDS |
| AAGTCCTTAATGTATCTCGT+GGG | 0.675628 | 4.1:+78771608 | MS.gene73249:CDS |
| CAGTCAGAAGAGATACTAGA+CGG | 0.676105 | 4.1:+78772114 | MS.gene73249:CDS |
| CTGAAGAAGGTGCAAAACGG+TGG | 0.680251 | 4.1:+78775361 | MS.gene73249:CDS |
| GTCAACTGGCACAATCTCTG+GGG | 0.700171 | 4.1:-78772091 | None:intergenic |
| TCCGAAGGTGATGATGACAT+TGG | 0.719898 | 4.1:+78773431 | MS.gene73249:CDS |
| TTTGAGATATAAAGTAAACG+AGG | 0.761951 | 4.1:+78774791 | MS.gene73249:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTATAAACAAATGTA+AGG | - | chr4.1:78774412-78774431 | None:intergenic | 10.0% |
| !! | AAATGTAAGGAAAATAATAT+AGG | - | chr4.1:78774399-78774418 | None:intergenic | 15.0% |
| !! | AAATTTATTGAGCAAAAATA+TGG | + | chr4.1:78774077-78774096 | MS.gene73249:intron | 15.0% |
| !! | AGAATGAATTAAATAACAAA+TGG | + | chr4.1:78773006-78773025 | MS.gene73249:CDS | 15.0% |
| !! | TTATAGTTCAAAAAAAATGT+GGG | - | chr4.1:78774004-78774023 | None:intergenic | 15.0% |
| !! | TTTATAGTTCAAAAAAAATG+TGG | - | chr4.1:78774005-78774024 | None:intergenic | 15.0% |
| !!! | AGATTTTTGAATTTAAGTTT+TGG | - | chr4.1:78771637-78771656 | None:intergenic | 15.0% |
| !!! | GTAAATTAGTCTTTTATTAA+AGG | + | chr4.1:78775018-78775037 | MS.gene73249:intron | 15.0% |
| !!! | TACAATTCAATGTTTTAAAT+AGG | - | chr4.1:78775212-78775231 | None:intergenic | 15.0% |
| !!! | TTGTAATTTTGATTTTTCAA+GGG | + | chr4.1:78775240-78775259 | MS.gene73249:intron | 15.0% |
| !! | AAAACCCAGATAATATATTA+TGG | - | chr4.1:78774247-78774266 | None:intergenic | 20.0% |
| !! | AAAACTATCATGATATGAAA+AGG | + | chr4.1:78774122-78774141 | MS.gene73249:intron | 20.0% |
| !! | AGATCAAATCAAAATACTTA+AGG | - | chr4.1:78773947-78773966 | None:intergenic | 20.0% |
| !! | ATAATAATTTCAGAATGCAA+AGG | + | chr4.1:78774423-78774442 | MS.gene73249:intron | 20.0% |
| !! | ATAATATAGGTTAAACATTG+AGG | - | chr4.1:78774386-78774405 | None:intergenic | 20.0% |
| !! | CATTATATCAAAACTTTCAA+AGG | + | chr4.1:78771571-78771590 | MS.gene73249:CDS | 20.0% |
| !! | TTCTCCATAATATATTATCT+GGG | + | chr4.1:78774240-78774259 | MS.gene73249:intron | 20.0% |
| !! | TTTCTCCATAATATATTATC+TGG | + | chr4.1:78774239-78774258 | MS.gene73249:intron | 20.0% |
| !!! | AAAATAATGGTTAGTTCAAT+GGG | + | chr4.1:78775420-78775439 | MS.gene73249:intron | 20.0% |
| !!! | AATGTTTTAAATAGGAACAT+AGG | - | chr4.1:78775204-78775223 | None:intergenic | 20.0% |
| !!! | AATTAGTCTTTTATTAAAGG+AGG | + | chr4.1:78775021-78775040 | MS.gene73249:intron | 20.0% |
| !!! | ATATATTATCTGGGTTTTAA+TGG | + | chr4.1:78774249-78774268 | MS.gene73249:intron | 20.0% |
| !!! | CTTGTAATTTTGATTTTTCA+AGG | + | chr4.1:78775239-78775258 | MS.gene73249:intron | 20.0% |
| !!! | GAATAACTCTATTTTTGTTA+GGG | - | chr4.1:78774533-78774552 | None:intergenic | 20.0% |
| !!! | TAAAATAATGGTTAGTTCAA+TGG | + | chr4.1:78775419-78775438 | MS.gene73249:intron | 20.0% |
| !!! | TAACCATTATTTTACAGAAA+CGG | - | chr4.1:78775413-78775432 | None:intergenic | 20.0% |
| ! | AAAAGAGTTGAATTCAATGA+AGG | + | chr4.1:78774722-78774741 | MS.gene73249:CDS | 25.0% |
| ! | AAAATATGGTTGTATAGCTA+TGG | + | chr4.1:78774091-78774110 | MS.gene73249:intron | 25.0% |
| ! | AGAAAAAAATCCATAGATTG+AGG | - | chr4.1:78774293-78774312 | None:intergenic | 25.0% |
| ! | ATAACAATATCCATATCAGA+TGG | - | chr4.1:78773068-78773087 | None:intergenic | 25.0% |
| ! | ATATCAAAACTTTCAAAGGT+GGG | + | chr4.1:78771575-78771594 | MS.gene73249:CDS | 25.0% |
| ! | CAGTAGAAATCATTATGATT+TGG | + | chr4.1:78774855-78774874 | MS.gene73249:intron | 25.0% |
| ! | GAATTCAATGAAGGAAATTA+TGG | + | chr4.1:78774731-78774750 | MS.gene73249:CDS | 25.0% |
| ! | GTCAGAAAAAAAAGATTGTT+GGG | - | chr4.1:78774028-78774047 | None:intergenic | 25.0% |
| ! | TAGGTAATTCATTAGTAAGT+AGG | + | chr4.1:78774332-78774351 | MS.gene73249:intron | 25.0% |
| ! | TATATCAAAACTTTCAAAGG+TGG | + | chr4.1:78771574-78771593 | MS.gene73249:CDS | 25.0% |
| ! | TATGTAATCCATATAGTTTG+CGG | + | chr4.1:78774959-78774978 | MS.gene73249:intron | 25.0% |
| ! | TGTCAGAAAAAAAAGATTGT+TGG | - | chr4.1:78774029-78774048 | None:intergenic | 25.0% |
| !! | AAATAATGGTTAGTTCAATG+GGG | + | chr4.1:78775421-78775440 | MS.gene73249:intron | 25.0% |
| !! | AATTTGCTTGAGTGTTAAAA+TGG | - | chr4.1:78771854-78771873 | None:intergenic | 25.0% |
| !! | CAATAAATTTTTCGTCTATC+TGG | - | chr4.1:78774067-78774086 | None:intergenic | 25.0% |
| !! | CAATCAAATTTAACTTCAAC+AGG | - | chr4.1:78772357-78772376 | None:intergenic | 25.0% |
| !! | TATCATGATAGTTTTCATGT+AGG | - | chr4.1:78774117-78774136 | None:intergenic | 25.0% |
| !! | TCTTTAGTTTCCTTATATGA+TGG | + | chr4.1:78773659-78773678 | MS.gene73249:CDS | 25.0% |
| !! | TTTGAGATATAAAGTAAACG+AGG | + | chr4.1:78774791-78774810 | MS.gene73249:CDS | 25.0% |
| !!! | GGAATAACTCTATTTTTGTT+AGG | - | chr4.1:78774534-78774553 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTACTGATTCCAG+TGG | + | chr4.1:78771497-78771516 | MS.gene73249:intron | 25.0% |
| AAAAAAAGATGAGTTGCCAT+AGG | + | chr4.1:78771458-78771477 | MS.gene73249:intron | 30.0% | |
| AGATAATATCTTCACCTTTC+TGG | - | chr4.1:78773783-78773802 | None:intergenic | 30.0% | |
| AGTAAAGATGAATCTACAGA+TGG | + | chr4.1:78773530-78773549 | MS.gene73249:CDS | 30.0% | |
| ATAATGAACCAAAAACCTGA+AGG | - | chr4.1:78775119-78775138 | None:intergenic | 30.0% | |
| ATGAATTACCTAGAACATCA+AGG | - | chr4.1:78774324-78774343 | None:intergenic | 30.0% | |
| CAAAAATATCAGAGTTATCG+AGG | - | chr4.1:78773154-78773173 | None:intergenic | 30.0% | |
| CAACCGTTTCTGTAAAATAA+TGG | + | chr4.1:78775407-78775426 | MS.gene73249:CDS | 30.0% | |
| CTAAAAATGATTGTTCCGAT+GGG | + | chr4.1:78772739-78772758 | MS.gene73249:CDS | 30.0% | |
| CTGAAAGTGATTGTTTCAAT+GGG | + | chr4.1:78772199-78772218 | MS.gene73249:CDS | 30.0% | |
| GTAAAGATGAATCTACAGAT+GGG | + | chr4.1:78773531-78773550 | MS.gene73249:CDS | 30.0% | |
| GTATATACTACCAACTACTA+AGG | - | chr4.1:78774913-78774932 | None:intergenic | 30.0% | |
| GTTTCTATGACTGATATCAA+CGG | - | chr4.1:78773910-78773929 | None:intergenic | 30.0% | |
| TAAAGATGAATCTACAGATG+GGG | + | chr4.1:78773532-78773551 | MS.gene73249:CDS | 30.0% | |
| TAAAGTGGCTAATCATGATT+TGG | + | chr4.1:78773472-78773491 | MS.gene73249:CDS | 30.0% | |
| TAATGAACCAAAAACCTGAA+GGG | - | chr4.1:78775118-78775137 | None:intergenic | 30.0% | |
| TACATAGTTAGAAGAACCTA+TGG | - | chr4.1:78771477-78771496 | None:intergenic | 30.0% | |
| TAGTTCAAAAAAAATGTGGG+AGG | - | chr4.1:78774001-78774020 | None:intergenic | 30.0% | |
| TCACTTACTAAAGCAGATTA+TGG | + | chr4.1:78775151-78775170 | MS.gene73249:intron | 30.0% | |
| ! | AAATCATGATTAGCCACTTT+AGG | - | chr4.1:78773473-78773492 | None:intergenic | 30.0% |
| ! | AAGATCATGCATTGATGTAA+TGG | + | chr4.1:78771720-78771739 | MS.gene73249:CDS | 30.0% |
| ! | ACTGCACTATTACTCTAAAA+TGG | - | chr4.1:78774888-78774907 | None:intergenic | 30.0% |
| ! | TTAGTTGTCTGTTTCTTGTT+TGG | + | chr4.1:78775495-78775514 | MS.gene73249:intron | 30.0% |
| ! | TTTTCATATTCCACTACAGA+CGG | + | chr4.1:78773037-78773056 | MS.gene73249:CDS | 30.0% |
| !! | TCATTAGTTCGTTTTTCTTC+AGG | + | chr4.1:78773839-78773858 | MS.gene73249:intron | 30.0% |
| !!! | ATTCTTGATCACTGATTTTC+AGG | + | chr4.1:78775308-78775327 | MS.gene73249:intron | 30.0% |
| AAAAATTGATCCATCATCCC+CGG | + | chr4.1:78771939-78771958 | MS.gene73249:CDS | 35.0% | |
| AAGGTTATTGTCAACCAGAA+AGG | + | chr4.1:78773766-78773785 | MS.gene73249:CDS | 35.0% | |
| AAGTCCTTAATGTATCTCGT+GGG | + | chr4.1:78771608-78771627 | MS.gene73249:CDS | 35.0% | |
| AAGTGCTTTGTACATTTGCT+GGG | + | chr4.1:78771342-78771361 | MS.gene73249:CDS | 35.0% | |
| AATCCATAACATGGATGATG+AGG | + | chr4.1:78771807-78771826 | MS.gene73249:CDS | 35.0% | |
| AATGCTACAAAAGCTGAAGA+AGG | + | chr4.1:78775348-78775367 | MS.gene73249:CDS | 35.0% | |
| ACATGAGAATTTCAAACCAC+TGG | - | chr4.1:78771516-78771535 | None:intergenic | 35.0% | |
| ACGAGAAGAATTACGAATCT+TGG | - | chr4.1:78774595-78774614 | None:intergenic | 35.0% | |
| ACTTCTTGTGATGAACATGA+AGG | + | chr4.1:78773719-78773738 | MS.gene73249:CDS | 35.0% | |
| AGAAGATGATCCTGATTTCA+TGG | + | chr4.1:78771987-78772006 | MS.gene73249:CDS | 35.0% | |
| AGGTCTTCAAATTCAATTGC+AGG | - | chr4.1:78773134-78773153 | None:intergenic | 35.0% | |
| AGTAATGCTTGAAATTGCCA+TGG | + | chr4.1:78774171-78774190 | MS.gene73249:intron | 35.0% | |
| AGTGAAGATGAATATACAGC+TGG | + | chr4.1:78773293-78773312 | MS.gene73249:CDS | 35.0% | |
| ATACTACTCCGCAAACTATA+TGG | - | chr4.1:78774970-78774989 | None:intergenic | 35.0% | |
| ATTCACTAAGAACAAGTCTG+TGG | - | chr4.1:78774824-78774843 | None:intergenic | 35.0% | |
| CAATCAGAAGAGATACTAGA+CGG | + | chr4.1:78772294-78772313 | MS.gene73249:CDS | 35.0% | |
| CATTAGTAAGTAGGCGAATT+AGG | + | chr4.1:78774341-78774360 | MS.gene73249:intron | 35.0% | |
| CCATTGAAACAATCACTTTC+AGG | - | chr4.1:78772201-78772220 | None:intergenic | 35.0% | |
| CCTAAAAATGATTGTTCCGA+TGG | + | chr4.1:78772738-78772757 | MS.gene73249:CDS | 35.0% | |
| CCTGAAAGTGATTGTTTCAA+TGG | + | chr4.1:78772198-78772217 | MS.gene73249:CDS | 35.0% | |
| CTGAAAATGATTGTTCCGAT+GGG | + | chr4.1:78772379-78772398 | MS.gene73249:CDS | 35.0% | |
| CTTACTAAAGCAGATTATGG+CGG | + | chr4.1:78775154-78775173 | MS.gene73249:intron | 35.0% | |
| GAAAACTGAACCTGATGTTT+GGG | + | chr4.1:78771756-78771775 | MS.gene73249:CDS | 35.0% | |
| GAAATTCTCATGTCAAACCT+AGG | + | chr4.1:78771523-78771542 | MS.gene73249:CDS | 35.0% | |
| GAATCTGAAGAGATACTAGA+CGG | + | chr4.1:78772834-78772853 | MS.gene73249:CDS | 35.0% | |
| GATAAAGATCTTGACTCTGT+AGG | + | chr4.1:78773230-78773249 | MS.gene73249:CDS | 35.0% | |
| GCTTTAGTAAGTGACAGATA+GGG | - | chr4.1:78775145-78775164 | None:intergenic | 35.0% | |
| GGGCATTAAAATGTAAACAG+AGG | - | chr4.1:78775094-78775113 | None:intergenic | 35.0% | |
| GTCTTCTTTACTTTCTCTAC+CGG | - | chr4.1:78772238-78772257 | None:intergenic | 35.0% | |
| TATCCTCTCACCATCATATA+AGG | - | chr4.1:78773672-78773691 | None:intergenic | 35.0% | |
| TATGTATGCCTTGATGTTCT+AGG | + | chr4.1:78774313-78774332 | MS.gene73249:intron | 35.0% | |
| TGAAAACTGAACCTGATGTT+TGG | + | chr4.1:78771755-78771774 | MS.gene73249:CDS | 35.0% | |
| TGAGAGGATACATGTTAAAG+AGG | + | chr4.1:78773682-78773701 | MS.gene73249:CDS | 35.0% | |
| TGCTTTAGTAAGTGACAGAT+AGG | - | chr4.1:78775146-78775165 | None:intergenic | 35.0% | |
| TGTTCAGACAATCCATAACA+TGG | + | chr4.1:78771798-78771817 | MS.gene73249:CDS | 35.0% | |
| TTAAAGATAGCTGCAAAGCA+AGG | + | chr4.1:78771872-78771891 | MS.gene73249:CDS | 35.0% | |
| TTCTCACTCAATAAAGTCCA+TGG | - | chr4.1:78774191-78774210 | None:intergenic | 35.0% | |
| TTTCGTCTATCTGGATTGTT+GGG | - | chr4.1:78774058-78774077 | None:intergenic | 35.0% | |
| ! | AAAGTGCTTTGTACATTTGC+TGG | + | chr4.1:78771341-78771360 | MS.gene73249:CDS | 35.0% |
| ! | ACACAGAAATAACTCTAGAG+TGG | + | chr4.1:78772976-78772995 | MS.gene73249:CDS | 35.0% |
| ! | ATAAGAATGGTGATGCAGAA+AGG | + | chr4.1:78774472-78774491 | MS.gene73249:CDS | 35.0% |
| ! | ATCATGCATTGATGTAATGG+AGG | + | chr4.1:78771723-78771742 | MS.gene73249:CDS | 35.0% |
| ! | ATTCCAAAGACTTCTAGAAG+TGG | + | chr4.1:78774549-78774568 | MS.gene73249:CDS | 35.0% |
| ! | TGAATACTATCAGCTTTGTG+TGG | + | chr4.1:78775471-78775490 | MS.gene73249:intron | 35.0% |
| ! | TGATGATGATGATGATGCAA+AGG | + | chr4.1:78771693-78771712 | MS.gene73249:CDS | 35.0% |
| ! | TTTCCTTATATGATGGTGAG+AGG | + | chr4.1:78773666-78773685 | MS.gene73249:CDS | 35.0% |
| ! | TTTTCGTCTATCTGGATTGT+TGG | - | chr4.1:78774059-78774078 | None:intergenic | 35.0% |
| !! | AGATTTAGTTCTAGAACAGG+AGG | + | chr4.1:78771422-78771441 | MS.gene73249:intron | 35.0% |
| !! | AGCAGATTTAGTTCTAGAAC+AGG | + | chr4.1:78771419-78771438 | MS.gene73249:intron | 35.0% |
| !! | CCATCGGAACAATCATTTTT+AGG | - | chr4.1:78772741-78772760 | None:intergenic | 35.0% |
| !! | TTTCAAAGGTGGGTTTGTTA+CGG | + | chr4.1:78771585-78771604 | MS.gene73249:CDS | 35.0% |
| AACATGGACTCAATCCTGAT+GGG | + | chr4.1:78773351-78773370 | MS.gene73249:CDS | 40.0% | |
| AAGCAATCATTTGCTTCCGA+AGG | + | chr4.1:78773416-78773435 | MS.gene73249:CDS | 40.0% | |
| AATAAGCCAGATGACTGTTC+TGG | + | chr4.1:78772936-78772955 | MS.gene73249:CDS | 40.0% | |
| ACCAATGTCATCATCACCTT+CGG | - | chr4.1:78773435-78773454 | None:intergenic | 40.0% | |
| AGAAGTGGTTCCAATCTTCA+GGG | + | chr4.1:78774564-78774583 | MS.gene73249:CDS | 40.0% | |
| AGATGATTCACCTGAATACG+AGG | + | chr4.1:78773391-78773410 | MS.gene73249:CDS | 40.0% | |
| AGGTTCTATGAGGATGATGA+GGG | + | chr4.1:78775665-78775684 | MS.gene73249:CDS | 40.0% | |
| AGTGCAGTTTCCTTAGTAGT+TGG | + | chr4.1:78774900-78774919 | MS.gene73249:intron | 40.0% | |
| ATCCATAGATTGAGGTATGC+AGG | - | chr4.1:78774285-78774304 | None:intergenic | 40.0% | |
| ATTGAGTCCATGTTCGTTAG+TGG | - | chr4.1:78773345-78773364 | None:intergenic | 40.0% | |
| CAACCTCATCATCCATGTTA+TGG | - | chr4.1:78771813-78771832 | None:intergenic | 40.0% | |
| CAATCTCTTGGGAAGACATT+GGG | - | chr4.1:78772443-78772462 | None:intergenic | 40.0% | |
| CACAAGATGTAGTGCGTAAA+GGG | + | chr4.1:78775594-78775613 | MS.gene73249:CDS | 40.0% | |
| CAGTCAGAAGAGATACTAGA+CGG | + | chr4.1:78772114-78772133 | MS.gene73249:CDS | 40.0% | |
| CATAACATGGATGATGAGGT+TGG | + | chr4.1:78771811-78771830 | MS.gene73249:CDS | 40.0% | |
| CCTGAAAATGATTGTTCCGA+TGG | + | chr4.1:78772378-78772397 | MS.gene73249:CDS | 40.0% | |
| CGTCTAGTATCTCTTCTGAT+TGG | - | chr4.1:78772296-78772315 | None:intergenic | 40.0% | |
| CTGGTTGACAATAACCTTTC+AGG | - | chr4.1:78773764-78773783 | None:intergenic | 40.0% | |
| GAAGTCCTTAATGTATCTCG+TGG | + | chr4.1:78771607-78771626 | MS.gene73249:CDS | 40.0% | |
| GCATCACCATTCTTATCAGT+CGG | - | chr4.1:78774468-78774487 | None:intergenic | 40.0% | |
| GTCAACTAGCACAATCTCTT+GGG | - | chr4.1:78772814-78772833 | None:intergenic | 40.0% | |
| GTCTTCTTTACTTTCTCCAC+CGG | - | chr4.1:78772418-78772437 | None:intergenic | 40.0% | |
| TAGAAGTGGTTCCAATCTTC+AGG | + | chr4.1:78774563-78774582 | MS.gene73249:CDS | 40.0% | |
| TAGGTTCTATGAGGATGATG+AGG | + | chr4.1:78775664-78775683 | MS.gene73249:CDS | 40.0% | |
| TCTTTATCACTAGCCACTTC+AGG | - | chr4.1:78773218-78773237 | None:intergenic | 40.0% | |
| TTCCTGAGAAGATGGTGAAA+TGG | - | chr4.1:78773865-78773884 | None:intergenic | 40.0% | |
| ! | AAGCTGAAGAAGGTGCAAAA+CGG | + | chr4.1:78775358-78775377 | MS.gene73249:CDS | 40.0% |
| ! | CCATCGGAACAATCATTTTC+AGG | - | chr4.1:78772381-78772400 | None:intergenic | 40.0% |
| ! | GAACCACTTCTAGAAGTCTT+TGG | - | chr4.1:78774555-78774574 | None:intergenic | 40.0% |
| ! | TCATGATTAGCCACTTTAGG+TGG | - | chr4.1:78773470-78773489 | None:intergenic | 40.0% |
| ! | TGCATTGATGTAATGGAGGA+AGG | + | chr4.1:78771727-78771746 | MS.gene73249:CDS | 40.0% |
| AACATGGATGATGAGGTTGG+TGG | + | chr4.1:78771814-78771833 | MS.gene73249:CDS | 45.0% | |
| AACTAGCACAATCTCTTGGG+AGG | - | chr4.1:78772811-78772830 | None:intergenic | 45.0% | |
| AATGGGCAAGATGACTGTTC+CGG | + | chr4.1:78772216-78772235 | MS.gene73249:CDS | 45.0% | |
| ACAATCTCTTGGGAGGACAT+TGG | - | chr4.1:78772804-78772823 | None:intergenic | 45.0% | |
| ACAGAGCCGACTGATAAGAA+TGG | + | chr4.1:78774459-78774478 | MS.gene73249:CDS | 45.0% | |
| ACTGATATCAACGGTCTCCA+TGG | - | chr4.1:78773901-78773920 | None:intergenic | 45.0% | |
| AGATCTTGACTCTGTAGGTC+TGG | + | chr4.1:78773235-78773254 | MS.gene73249:CDS | 45.0% | |
| AGCAGCTGAATCTCCATTAG+AGG | - | chr4.1:78772694-78772713 | None:intergenic | 45.0% | |
| AGGAAGAGAAAACGCTCACA+AGG | + | chr4.1:78771892-78771911 | MS.gene73249:CDS | 45.0% | |
| ATAGCATTCGCTGATGAAGC+AGG | + | chr4.1:78775623-78775642 | MS.gene73249:CDS | 45.0% | |
| CAATCTCTTGGGAGGACATT+GGG | - | chr4.1:78772803-78772822 | None:intergenic | 45.0% | |
| CATCCTCATAGAACCTAACC+TGG | - | chr4.1:78775661-78775680 | None:intergenic | 45.0% | |
| CCACAAGATGTAGTGCGTAA+AGG | + | chr4.1:78775593-78775612 | MS.gene73249:CDS | 45.0% | |
| CCTTTACGCACTACATCTTG+TGG | - | chr4.1:78775596-78775615 | None:intergenic | 45.0% | |
| CGTCAACTAGCACAATCTCT+TGG | - | chr4.1:78772815-78772834 | None:intergenic | 45.0% | |
| CGTCTAGTATCTCTTCTGAC+TGG | - | chr4.1:78772116-78772135 | None:intergenic | 45.0% | |
| CTATGACTACAACAGCAGCA+AGG | - | chr4.1:78774153-78774172 | None:intergenic | 45.0% | |
| CTCCTGCATACCTCAATCTA+TGG | + | chr4.1:78774280-78774299 | MS.gene73249:intron | 45.0% | |
| CTGAGAGTCTCCATGAAATC+AGG | - | chr4.1:78772000-78772019 | None:intergenic | 45.0% | |
| GAACATGGACTCAATCCTGA+TGG | + | chr4.1:78773350-78773369 | MS.gene73249:CDS | 45.0% | |
| GAACCAAAAACCTGAAGGGA+GGG | - | chr4.1:78775114-78775133 | None:intergenic | 45.0% | |
| GAAGGTAGTTCAAAGCTGCA+TGG | + | chr4.1:78773737-78773756 | MS.gene73249:CDS | 45.0% | |
| GATGACTACAACGCTCCATT+CGG | - | chr4.1:78771549-78771568 | None:intergenic | 45.0% | |
| GATTGCTTCTCCTCGTATTC+AGG | - | chr4.1:78773404-78773423 | None:intergenic | 45.0% | |
| GCAATCTCTTGGGAAGACAT+TGG | - | chr4.1:78772444-78772463 | None:intergenic | 45.0% | |
| GCAGCTGAATCTCCATTAGA+GGG | - | chr4.1:78772693-78772712 | None:intergenic | 45.0% | |
| GTCAACTAGCGCAATCTCTT+GGG | - | chr4.1:78772454-78772473 | None:intergenic | 45.0% | |
| GTGGCTGTCTTTCATGTCAA+GGG | + | chr4.1:78775380-78775399 | MS.gene73249:CDS | 45.0% | |
| TACTAGACGGTCAAGAGTTC+TGG | + | chr4.1:78772127-78772146 | MS.gene73249:CDS | 45.0% | |
| TACTGAACAAGGCCTCAATC+CGG | + | chr4.1:78773583-78773602 | MS.gene73249:CDS | 45.0% | |
| TCATCACATGCCCAAACATC+AGG | - | chr4.1:78771769-78771788 | None:intergenic | 45.0% | |
| TCCTTAATGTATCTCGTGGG+CGG | + | chr4.1:78771611-78771630 | MS.gene73249:CDS | 45.0% | |
| TCTCGTTCAGCAACTCATCT+GGG | + | chr4.1:78774609-78774628 | MS.gene73249:CDS | 45.0% | |
| TCTCTACCAGAACAGTCATC+TGG | - | chr4.1:78772945-78772964 | None:intergenic | 45.0% | |
| TCTCTACCGGAACAATCATC+TGG | - | chr4.1:78772585-78772604 | None:intergenic | 45.0% | |
| TCTCTTGGGAAGACATTGAG+TGG | - | chr4.1:78772620-78772639 | None:intergenic | 45.0% | |
| TGAACCAAAAACCTGAAGGG+AGG | - | chr4.1:78775115-78775134 | None:intergenic | 45.0% | |
| TGGAGGTGAAGAACTACTGT+CGG | - | chr4.1:78775555-78775574 | None:intergenic | 45.0% | |
| TGTGGGAGGATTCTATAACG+TGG | - | chr4.1:78773987-78774006 | None:intergenic | 45.0% | |
| TTACGCACTACATCTTGTGG+AGG | - | chr4.1:78775593-78775612 | None:intergenic | 45.0% | |
| TTATCACTAGCCACTTCAGG+TGG | - | chr4.1:78773215-78773234 | None:intergenic | 45.0% | |
| TTCTCGTTCAGCAACTCATC+TGG | + | chr4.1:78774608-78774627 | MS.gene73249:CDS | 45.0% | |
| TTTGCTGGGTCAGACACTTA+AGG | + | chr4.1:78771356-78771375 | MS.gene73249:CDS | 45.0% | |
| ! | ACTAGTCTCACCACCTAAAG+TGG | + | chr4.1:78773457-78773476 | MS.gene73249:CDS | 45.0% |
| ! | ACTCAATCCTGATGGGTATC+TGG | + | chr4.1:78773358-78773377 | MS.gene73249:CDS | 45.0% |
| ! | ATCTCTTCTGACTGGTCAAC+TGG | - | chr4.1:78772108-78772127 | None:intergenic | 45.0% |
| ! | CAGAGCTTTTCCTGAGAAGA+TGG | - | chr4.1:78773873-78773892 | None:intergenic | 45.0% |
| ! | GGAGGTGAGACTACATTTTG+TGG | - | chr4.1:78775575-78775594 | None:intergenic | 45.0% |
| ! | GGTGAGACTACATTTTGTGG+AGG | - | chr4.1:78775572-78775591 | None:intergenic | 45.0% |
| ! | TCCGAAGGTGATGATGACAT+TGG | + | chr4.1:78773431-78773450 | MS.gene73249:CDS | 45.0% |
| ! | TGCTTTTCCATGTGGTCTTC+CGG | - | chr4.1:78771961-78771980 | None:intergenic | 45.0% |
| !! | ATTGAGGCCTTGTTCAGTAG+TGG | - | chr4.1:78773582-78773601 | None:intergenic | 45.0% |
| !! | CATTTTAATGCCCTCCCTTC+AGG | + | chr4.1:78775101-78775120 | MS.gene73249:intron | 45.0% |
| !!! | CTGTTTGCTGCTTTTCCATG+TGG | - | chr4.1:78771969-78771988 | None:intergenic | 45.0% |
| ACAGCCTCTTGGGAAGACAT+TGG | - | chr4.1:78772264-78772283 | None:intergenic | 50.0% | |
| ACCAGCTGAATCTCCACTAG+AGG | - | chr4.1:78772154-78772173 | None:intergenic | 50.0% | |
| AGCAGCTGAATCTCCACTAG+AGG | - | chr4.1:78772514-78772533 | None:intergenic | 50.0% | |
| CAAAGCTGCATGGTCCTGAA+AGG | + | chr4.1:78773747-78773766 | MS.gene73249:CDS | 50.0% | |
| CAAGAGTTCTCACCCTCTAG+TGG | + | chr4.1:78772138-78772157 | MS.gene73249:CDS | 50.0% | |
| CAGCCTCTTGGGAAGACATT+GGG | - | chr4.1:78772263-78772282 | None:intergenic | 50.0% | |
| CATGTCAAACCTAGGCCGAA+TGG | + | chr4.1:78771531-78771550 | MS.gene73249:CDS | 50.0% | |
| CCAGCTGAATCTCCACTAGA+GGG | - | chr4.1:78772153-78772172 | None:intergenic | 50.0% | |
| CGACAAACCAGATACCCATC+AGG | - | chr4.1:78773368-78773387 | None:intergenic | 50.0% | |
| CTCGTTCAGCAACTCATCTG+GGG | + | chr4.1:78774610-78774629 | MS.gene73249:CDS | 50.0% | |
| CTCTGCTCCACTACTGAACA+AGG | + | chr4.1:78773572-78773591 | MS.gene73249:CDS | 50.0% | |
| GAATCGTCAGAGAGACGAAC+CGG | - | chr4.1:78773617-78773636 | None:intergenic | 50.0% | |
| GACGGTGAAGCCATCTGATA+TGG | + | chr4.1:78773055-78773074 | MS.gene73249:CDS | 50.0% | |
| GATGGGCCAGATGATTGTTC+CGG | + | chr4.1:78772576-78772595 | MS.gene73249:CDS | 50.0% | |
| GATTGCTTCGCGTCGTATTC+AGG | - | chr4.1:78773641-78773660 | None:intergenic | 50.0% | |
| GCAGCTGAATCTCCACTAGA+GGG | - | chr4.1:78772513-78772532 | None:intergenic | 50.0% | |
| GCAGTTCTCGAAACAACACC+AGG | - | chr4.1:78774498-78774517 | None:intergenic | 50.0% | |
| GGAAAAGCTCTGCAAAGCCA+TGG | + | chr4.1:78773881-78773900 | MS.gene73249:CDS | 50.0% | |
| GGAACAATCATCTGGCCCAT+CGG | - | chr4.1:78772577-78772596 | None:intergenic | 50.0% | |
| GGCCATTTCACCATCTTCTC+AGG | + | chr4.1:78773860-78773879 | MS.gene73249:intron | 50.0% | |
| GGTCAACTAGCGCAATCTCT+TGG | - | chr4.1:78772455-78772474 | None:intergenic | 50.0% | |
| GGTCAACTGGCACAATCTCT+GGG | - | chr4.1:78772095-78772114 | None:intergenic | 50.0% | |
| GGTGGCTGTCTTTCATGTCA+AGG | + | chr4.1:78775379-78775398 | MS.gene73249:CDS | 50.0% | |
| GTCAACTAGCACAGCCTCTT+GGG | - | chr4.1:78772274-78772293 | None:intergenic | 50.0% | |
| GTCAACTGGCACAATCTCTG+GGG | - | chr4.1:78772094-78772113 | None:intergenic | 50.0% | |
| GTCCTTCACGCACTTCTTCT+TGG | - | chr4.1:78772058-78772077 | None:intergenic | 50.0% | |
| GTGCCAGGTTAGGTTCTATG+AGG | + | chr4.1:78775655-78775674 | MS.gene73249:CDS | 50.0% | |
| TCTCTACCGGAACAGTCATC+TGG | - | chr4.1:78772225-78772244 | None:intergenic | 50.0% | |
| TCTCTTGGGAAGACATTGGG+TGG | - | chr4.1:78772440-78772459 | None:intergenic | 50.0% | |
| TGAATCTACAGATGGGGCTG+AGG | + | chr4.1:78773538-78773557 | MS.gene73249:CDS | 50.0% | |
| TGGTCAACTGGCACAATCTC+TGG | - | chr4.1:78772096-78772115 | None:intergenic | 50.0% | |
| TTGCAGGAAAGCTTGCAGAC+TGG | - | chr4.1:78773118-78773137 | None:intergenic | 50.0% | |
| ! | AATGGTGATGCAGAAAGGCC+TGG | + | chr4.1:78774477-78774496 | MS.gene73249:CDS | 50.0% |
| ! | ACAATCTCTGGGGAGGACAT+TGG | - | chr4.1:78772084-78772103 | None:intergenic | 50.0% |
| ! | CAAGAGTTCTGGCCCTCTAA+TGG | + | chr4.1:78772678-78772697 | MS.gene73249:CDS | 50.0% |
| ! | CTGAAGAAGGTGCAAAACGG+TGG | + | chr4.1:78775361-78775380 | MS.gene73249:CDS | 50.0% |
| ! | CTTTTCCATGTGGTCTTCCG+GGG | - | chr4.1:78771959-78771978 | None:intergenic | 50.0% |
| ! | GACCAAGAAGAAGTGCGTGA+AGG | + | chr4.1:78772053-78772072 | MS.gene73249:CDS | 50.0% |
| ! | GCTTTTCCATGTGGTCTTCC+GGG | - | chr4.1:78771960-78771979 | None:intergenic | 50.0% |
| !! | ATGCCCTCCCTTCAGGTTTT+TGG | + | chr4.1:78775108-78775127 | MS.gene73249:intron | 50.0% |
| ACCAGTCTCACCACCTGAAG+TGG | + | chr4.1:78773202-78773221 | MS.gene73249:CDS | 55.0% | |
| AGACGAACCGGACATCCATC+CGG | - | chr4.1:78773605-78773624 | None:intergenic | 55.0% | |
| AGCAGCTGAATCTCCACCAG+AGG | - | chr4.1:78772334-78772353 | None:intergenic | 55.0% | |
| ATCATCCCCGGAAGACCACA+TGG | + | chr4.1:78771951-78771970 | MS.gene73249:CDS | 55.0% | |
| ATGAGTTCCCACCGTCTAGC+GGG | + | chr4.1:78772859-78772878 | MS.gene73249:CDS | 55.0% | |
| ATGTGGTCTTCCGGGGATGA+TGG | - | chr4.1:78771952-78771971 | None:intergenic | 55.0% | |
| CAAGAGTTCTCGCCCTCTAG+TGG | + | chr4.1:78772498-78772517 | MS.gene73249:CDS | 55.0% | |
| CATGAGTTCCCACCGTCTAG+CGG | + | chr4.1:78772858-78772877 | MS.gene73249:CDS | 55.0% | |
| CCACCCAATGTCTTCCCAAG+AGG | + | chr4.1:78772257-78772276 | MS.gene73249:CDS | 55.0% | |
| CCCTCTAGTGGAGATTCAGC+TGG | + | chr4.1:78772150-78772169 | MS.gene73249:CDS | 55.0% | |
| CCTCAATCCGGATGGATGTC+CGG | + | chr4.1:78773595-78773614 | MS.gene73249:CDS | 55.0% | |
| CCTCTTGGGAAGACATTGGG+TGG | - | chr4.1:78772260-78772279 | None:intergenic | 55.0% | |
| GAACAAGGCCTCAATCCGGA+TGG | + | chr4.1:78773587-78773606 | MS.gene73249:CDS | 55.0% | |
| GATGGCTTCACCGTCTGTAG+TGG | - | chr4.1:78773050-78773069 | None:intergenic | 55.0% | |
| GATGGGCCAGATGACTGTTC+CGG | + | chr4.1:78772396-78772415 | MS.gene73249:CDS | 55.0% | |
| GCAGCTGAATCTCCACCAGA+GGG | - | chr4.1:78772333-78772352 | None:intergenic | 55.0% | |
| GCATTCGCTGATGAAGCAGG+TGG | + | chr4.1:78775626-78775645 | MS.gene73249:CDS | 55.0% | |
| GCCGCCCACGAGATACATTA+AGG | - | chr4.1:78771615-78771634 | None:intergenic | 55.0% | |
| GGAACAGTCATCTGGCCCAT+CGG | - | chr4.1:78772397-78772416 | None:intergenic | 55.0% | |
| GGTCAACTAGCACAGCCTCT+TGG | - | chr4.1:78772275-78772294 | None:intergenic | 55.0% | |
| GTGGAAAGCTGTGCCAGGTT+AGG | + | chr4.1:78775645-78775664 | MS.gene73249:CDS | 55.0% | |
| TACAACGCTCCATTCGGCCT+AGG | - | chr4.1:78771543-78771562 | None:intergenic | 55.0% | |
| TACAGATGGGGCTGAGGTTC+AGG | + | chr4.1:78773544-78773563 | MS.gene73249:CDS | 55.0% | |
| TCCATGTTCGTTAGTGGCGC+AGG | - | chr4.1:78773339-78773358 | None:intergenic | 55.0% | |
| TCCTGCGCCACTAACGAACA+TGG | + | chr4.1:78773335-78773354 | MS.gene73249:CDS | 55.0% | |
| TCTCCACCGGAACAGTCATC+TGG | - | chr4.1:78772405-78772424 | None:intergenic | 55.0% | |
| TCTCTTGGGAGGACATTGGG+TGG | - | chr4.1:78772800-78772819 | None:intergenic | 55.0% | |
| ! | AACTGGCACAATCTCTGGGG+AGG | - | chr4.1:78772091-78772110 | None:intergenic | 55.0% |
| !! | CTTGGAAGCGCCCTGAAGAT+TGG | - | chr4.1:78774577-78774596 | None:intergenic | 55.0% |
| AGCAGGTGGAAAGCTGTGCC+AGG | + | chr4.1:78775640-78775659 | MS.gene73249:CDS | 60.0% | |
| CAAGAGTTCTCGCCCTCTGG+TGG | + | chr4.1:78772318-78772337 | MS.gene73249:CDS | 60.0% | |
| CCGGACATCCATCCGGATTG+AGG | - | chr4.1:78773598-78773617 | None:intergenic | 60.0% | |
| CTGAATCCCCGCTAGACGGT+GGG | - | chr4.1:78772869-78772888 | None:intergenic | 60.0% | |
| GCAGCTGAATCCCCGCTAGA+CGG | - | chr4.1:78772873-78772892 | None:intergenic | 60.0% | |
| GCCACTTCAGGTGGTGAGAC+TGG | - | chr4.1:78773206-78773225 | None:intergenic | 60.0% | |
| GGTCAAGAGTTCTCGCCCTC+TGG | + | chr4.1:78772315-78772334 | MS.gene73249:CDS | 60.0% | |
| TGAGTTCCCACCGTCTAGCG+GGG | + | chr4.1:78772860-78772879 | MS.gene73249:CDS | 60.0% | |
| ! | TCTCTGGGGAGGACATTGGC+TGG | - | chr4.1:78772080-78772099 | None:intergenic | 60.0% |
| GCTGAATCCCCGCTAGACGG+TGG | - | chr4.1:78772870-78772889 | None:intergenic | 65.0% | |
| GGGCCAGATGACTGTTCCGG+TGG | + | chr4.1:78772399-78772418 | MS.gene73249:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 78771336 | 78775709 | 78771336 | ID=MS.gene73249 |
| chr4.1 | mRNA | 78771336 | 78775709 | 78771336 | ID=MS.gene73249.t1;Parent=MS.gene73249 |
| chr4.1 | exon | 78771336 | 78771377 | 78771336 | ID=MS.gene73249.t1.exon1;Parent=MS.gene73249.t1 |
| chr4.1 | CDS | 78771336 | 78771377 | 78771336 | ID=cds.MS.gene73249.t1;Parent=MS.gene73249.t1 |
| chr4.1 | exon | 78771517 | 78773787 | 78771517 | ID=MS.gene73249.t1.exon2;Parent=MS.gene73249.t1 |
| chr4.1 | CDS | 78771517 | 78773787 | 78771517 | ID=cds.MS.gene73249.t1;Parent=MS.gene73249.t1 |
| chr4.1 | exon | 78773861 | 78773936 | 78773861 | ID=MS.gene73249.t1.exon3;Parent=MS.gene73249.t1 |
| chr4.1 | CDS | 78773861 | 78773936 | 78773861 | ID=cds.MS.gene73249.t1;Parent=MS.gene73249.t1 |
| chr4.1 | exon | 78774436 | 78774812 | 78774436 | ID=MS.gene73249.t1.exon4;Parent=MS.gene73249.t1 |
| chr4.1 | CDS | 78774436 | 78774812 | 78774436 | ID=cds.MS.gene73249.t1;Parent=MS.gene73249.t1 |
| chr4.1 | exon | 78775330 | 78775428 | 78775330 | ID=MS.gene73249.t1.exon5;Parent=MS.gene73249.t1 |
| chr4.1 | CDS | 78775330 | 78775428 | 78775330 | ID=cds.MS.gene73249.t1;Parent=MS.gene73249.t1 |
| chr4.1 | exon | 78775545 | 78775709 | 78775545 | ID=MS.gene73249.t1.exon6;Parent=MS.gene73249.t1 |
| chr4.1 | CDS | 78775545 | 78775709 | 78775545 | ID=cds.MS.gene73249.t1;Parent=MS.gene73249.t1 |
| Gene Sequence |
| Protein sequence |
