Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73666.t1 | RHN40111.1 | 82.3 | 79 | 13 | 1 | 1 | 79 | 176 | 253 | 5.10E-22 | 114 |
| MS.gene73666.t1 | RHN40111.1 | 87.9 | 58 | 7 | 0 | 70 | 127 | 726 | 783 | 1.50E-18 | 102.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73666.t1 | P10978 | 49.1 | 55 | 28 | 0 | 70 | 124 | 1271 | 1325 | 5.5e-09 | 62.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73666.t1 | A0A396GIW2 | 82.3 | 79 | 13 | 1 | 1 | 79 | 176 | 253 | 3.7e-22 | 114.0 |
| MS.gene73666.t1 | A0A396GIW2 | 87.9 | 58 | 7 | 0 | 70 | 127 | 726 | 783 | 1.1e-18 | 102.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058266 | MS.gene73666 | 0.882789 | 7.76E-71 | -1.69E-46 |
| MS.gene060426 | MS.gene73666 | 0.840659 | 7.61E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 32 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTGTGGCAACTCTTAC+AGG | 0.225907 | 4.3:-7923775 | None:intergenic |
| TCAACCTTACCATCACATTT+TGG | 0.252049 | 4.3:-7923733 | None:intergenic |
| ATCTCCTGAGCTGAGATGTT+GGG | 0.302898 | 4.3:-7923888 | None:intergenic |
| TCACTACCATCTTCAATTAC+TGG | 0.376171 | 4.3:-7923835 | None:intergenic |
| GATGAAGACCCTAGGGTTGA+TGG | 0.395963 | 4.3:+7923808 | MS.gene73666:CDS |
| TAGTGATGATGAAGATGTTC+AGG | 0.431216 | 4.3:+7923852 | MS.gene73666:CDS |
| GCGATCCATGCCGATCAATT+CGG | 0.450357 | 4.3:-7925507 | None:intergenic |
| GAACTAGGGTACCTGGTAGA+TGG | 0.478163 | 4.3:-7923928 | None:intergenic |
| GATCTCCTGAGCTGAGATGT+TGG | 0.479025 | 4.3:-7923889 | None:intergenic |
| CAACTTTGTGCCGAATTGAT+CGG | 0.486593 | 4.3:+7925497 | MS.gene73666:CDS |
| AATCCCCAACATCTCAGCTC+AGG | 0.503790 | 4.3:+7923884 | MS.gene73666:CDS |
| AACACCAAAATGTGATGGTA+AGG | 0.512205 | 4.3:+7923729 | MS.gene73666:CDS |
| ATATTGATGTCAGATATCAT+TGG | 0.516520 | 4.3:+7925372 | MS.gene73666:intron |
| TCTCCTGAGCTGAGATGTTG+GGG | 0.523063 | 4.3:-7923887 | None:intergenic |
| GGAAGAACAACAATTTATGT+TGG | 0.534006 | 4.3:+7925409 | MS.gene73666:CDS |
| CTGTAAGAGTTGCCACAGAA+GGG | 0.536965 | 4.3:+7923776 | MS.gene73666:CDS |
| ACTGGCTCTCCATCAACCCT+AGG | 0.537342 | 4.3:-7923817 | None:intergenic |
| TGTAAGAGTTGCCACAGAAG+GGG | 0.544300 | 4.3:+7923777 | MS.gene73666:CDS |
| GAGATCTTGATGAAGACCCT+AGG | 0.554127 | 4.3:+7923800 | MS.gene73666:CDS |
| CCTGTAAGAGTTGCCACAGA+AGG | 0.558919 | 4.3:+7923775 | MS.gene73666:CDS |
| ACTCTTACAGGAGGAGTGAT+CGG | 0.576759 | 4.3:-7923763 | None:intergenic |
| GGAGAGCCAGTAATTGAAGA+TGG | 0.578285 | 4.3:+7923829 | MS.gene73666:CDS |
| TTGTGCCGAATTGATCGGCA+TGG | 0.582076 | 4.3:+7925502 | MS.gene73666:CDS |
| CCAGAAACACCAAAATGTGA+TGG | 0.595828 | 4.3:+7923724 | MS.gene73666:CDS |
| ACTTTCGTCAACATATCCGC+AGG | 0.606804 | 4.3:-7925455 | None:intergenic |
| AGATCTTGATGAAGACCCTA+GGG | 0.607768 | 4.3:+7923801 | MS.gene73666:CDS |
| CTGGCTCTCCATCAACCCTA+GGG | 0.612809 | 4.3:-7923816 | None:intergenic |
| GATGATGAAGATGTTCAGGA+TGG | 0.628053 | 4.3:+7923856 | MS.gene73666:CDS |
| GTAAGAGTTGCCACAGAAGG+GGG | 0.631031 | 4.3:+7923778 | MS.gene73666:CDS |
| GATATCGTCAACCATCTACC+AGG | 0.639657 | 4.3:+7923917 | MS.gene73666:CDS |
| TCATTGGTTGCGTCAAGCAG+CGG | 0.654978 | 4.3:+7925388 | MS.gene73666:CDS |
| TCTGTGGCAACTCTTACAGG+AGG | 0.691602 | 4.3:-7923772 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAAAGATTTCTTGATCAAC+TGG | + | chr4.3:7925259-7925278 | MS.gene73666:intron | 25.0% |
| ! | AAAAGATTTCTTGATCAACT+GGG | + | chr4.3:7925260-7925279 | MS.gene73666:intron | 25.0% |
| ! | AAATTTCTTATACCATTGTC+TGG | - | chr4.3:7924451-7924470 | None:intergenic | 25.0% |
| ! | AATTTCTTATACCATTGTCT+GGG | - | chr4.3:7924450-7924469 | None:intergenic | 25.0% |
| ! | ATATTGATGTCAGATATCAT+TGG | + | chr4.3:7925372-7925391 | MS.gene73666:intron | 25.0% |
| ! | TATCATCTACATATAACAGA+AGG | - | chr4.3:7924563-7924582 | None:intergenic | 25.0% |
| ! | TTTAGATGAAGAAATCTACA+TGG | + | chr4.3:7924341-7924360 | MS.gene73666:intron | 25.0% |
| !!! | ATAAGTATCATTTTTCTGCA+AGG | - | chr4.3:7924061-7924080 | None:intergenic | 25.0% |
| !!! | ATGTTTTGACATATACACAA+TGG | - | chr4.3:7924518-7924537 | None:intergenic | 25.0% |
| AAATTGAAGAAGAGCTTGTA+CGG | + | chr4.3:7924411-7924430 | MS.gene73666:intron | 30.0% | |
| ATTGAACTCATCTTAACAAC+TGG | - | chr4.3:7924240-7924259 | None:intergenic | 30.0% | |
| CGATGAAGTTAAAACTCATA+AGG | + | chr4.3:7923993-7924012 | MS.gene73666:intron | 30.0% | |
| CTAGAAAGATTCAACATGAA+GGG | + | chr4.3:7924756-7924775 | MS.gene73666:intron | 30.0% | |
| CTCATAAGGATAAAATCCAA+TGG | + | chr4.3:7924007-7924026 | MS.gene73666:intron | 30.0% | |
| GGAAGAACAACAATTTATGT+TGG | + | chr4.3:7925409-7925428 | MS.gene73666:CDS | 30.0% | |
| GTATATGTCAAAACATTTCG+AGG | + | chr4.3:7924522-7924541 | MS.gene73666:intron | 30.0% | |
| TCAAGATGAAAAAGAAGCTA+TGG | + | chr4.3:7924845-7924864 | MS.gene73666:intron | 30.0% | |
| TCCTTTGACATGAAAAATCT+AGG | + | chr4.3:7924642-7924661 | MS.gene73666:intron | 30.0% | |
| TCTAGAAAGATTCAACATGA+AGG | + | chr4.3:7924755-7924774 | MS.gene73666:intron | 30.0% | |
| TTAACTTCATCGAAACTTTC+CGG | - | chr4.3:7923985-7924004 | None:intergenic | 30.0% | |
| TTTCTTCATCTAAATCTCCA+TGG | - | chr4.3:7924335-7924354 | None:intergenic | 30.0% | |
| ! | AGTTCAATTCGAGTTATACT+CGG | + | chr4.3:7924252-7924271 | MS.gene73666:intron | 30.0% |
| ! | TATGATTGGTGATTTGAAGA+AGG | + | chr4.3:7924608-7924627 | MS.gene73666:intron | 30.0% |
| ! | TGTAGATGATATGTTGATAG+TGG | + | chr4.3:7924572-7924591 | MS.gene73666:intron | 30.0% |
| !! | GTAGATGATATGTTGATAGT+GGG | + | chr4.3:7924573-7924592 | MS.gene73666:intron | 30.0% |
| !! | TCTTTTTCATCTTGACTAGT+AGG | - | chr4.3:7924840-7924859 | None:intergenic | 30.0% |
| AAAGCTCGCTTAGTTGTTAA+AGG | + | chr4.3:7924171-7924190 | MS.gene73666:intron | 35.0% | |
| AACACCAAAATGTGATGGTA+AGG | + | chr4.3:7923729-7923748 | MS.gene73666:CDS | 35.0% | |
| AATGGTGTTTACTTTCTCAG+GGG | + | chr4.3:7925133-7925152 | MS.gene73666:intron | 35.0% | |
| CAATCCTGGTAAAGAACATT+GGG | + | chr4.3:7924971-7924990 | MS.gene73666:intron | 35.0% | |
| GAATGGTGTTTACTTTCTCA+GGG | + | chr4.3:7925132-7925151 | MS.gene73666:intron | 35.0% | |
| GGATAAAATCCAATGGATGA+AGG | + | chr4.3:7924014-7924033 | MS.gene73666:intron | 35.0% | |
| TACATCTGTATCACAGATGA+GGG | + | chr4.3:7923955-7923974 | MS.gene73666:intron | 35.0% | |
| TAGAAAGTCTACTTCAGGAA+TGG | + | chr4.3:7925115-7925134 | MS.gene73666:intron | 35.0% | |
| TCACACTGATAAAAATCCTG+CGG | + | chr4.3:7925439-7925458 | MS.gene73666:CDS | 35.0% | |
| TCACTACCATCTTCAATTAC+TGG | - | chr4.3:7923838-7923857 | None:intergenic | 35.0% | |
| TCTGATAAGTGCTTATGCTT+TGG | + | chr4.3:7925032-7925051 | MS.gene73666:intron | 35.0% | |
| ! | AATTCGAGTTATACTCGGAT+TGG | + | chr4.3:7924257-7924276 | MS.gene73666:intron | 35.0% |
| ! | AGATTTGGAGCTTGAACAAA+TGG | + | chr4.3:7924290-7924309 | MS.gene73666:intron | 35.0% |
| ! | ATACCTAGAATTTGCTTTGC+AGG | - | chr4.3:7924669-7924688 | None:intergenic | 35.0% |
| ! | ATTGGTTGCTAGCTTAGATT+TGG | + | chr4.3:7924275-7924294 | MS.gene73666:intron | 35.0% |
| ! | GCCTAGATTTTTCATGTCAA+AGG | - | chr4.3:7924646-7924665 | None:intergenic | 35.0% |
| ! | TACCTAGAATTTGCTTTGCA+GGG | - | chr4.3:7924668-7924687 | None:intergenic | 35.0% |
| ! | TAGTGATGATGAAGATGTTC+AGG | + | chr4.3:7923852-7923871 | MS.gene73666:CDS | 35.0% |
| ! | TCAACCTTACCATCACATTT+TGG | - | chr4.3:7923736-7923755 | None:intergenic | 35.0% |
| ! | TCTGCTGAGTTTAAAGTGAT+TGG | - | chr4.3:7924808-7924827 | None:intergenic | 35.0% |
| !! | GGATCAGAATCGATTTTGAA+AGG | + | chr4.3:7925056-7925075 | MS.gene73666:intron | 35.0% |
| AAAAGCCCTGAAGAACAAGT+GGG | + | chr4.3:7924107-7924126 | MS.gene73666:intron | 40.0% | |
| AAGTAGACTTTCTACCATCC+AGG | - | chr4.3:7925109-7925128 | None:intergenic | 40.0% | |
| ACAACAACAGTATGTGGAAC+GGG | + | chr4.3:7924731-7924750 | MS.gene73666:intron | 40.0% | |
| ACATCTGTATCACAGATGAG+GGG | + | chr4.3:7923956-7923975 | MS.gene73666:intron | 40.0% | |
| AGAGGCAGAATATATTGCCA+TGG | + | chr4.3:7925208-7925227 | MS.gene73666:intron | 40.0% | |
| AGATCTTGATGAAGACCCTA+GGG | + | chr4.3:7923801-7923820 | MS.gene73666:CDS | 40.0% | |
| AGGATTTGAGAAGACTCGAA+AGG | + | chr4.3:7924374-7924393 | MS.gene73666:intron | 40.0% | |
| ATACAGATGTACTCCGAACT+AGG | - | chr4.3:7923946-7923965 | None:intergenic | 40.0% | |
| ATCTACATGGTTCAACCAGA+AGG | + | chr4.3:7924354-7924373 | MS.gene73666:intron | 40.0% | |
| ATGGTGTTTACTTTCTCAGG+GGG | + | chr4.3:7925134-7925153 | MS.gene73666:intron | 40.0% | |
| CAACTTTGTGCCGAATTGAT+CGG | + | chr4.3:7925497-7925516 | MS.gene73666:CDS | 40.0% | |
| CAATATGCTTTGTACGAGAG+TGG | - | chr4.3:7925358-7925377 | None:intergenic | 40.0% | |
| CACAACAACAGTATGTGGAA+CGG | + | chr4.3:7924730-7924749 | MS.gene73666:intron | 40.0% | |
| CCAATCCTGGTAAAGAACAT+TGG | + | chr4.3:7924970-7924989 | MS.gene73666:intron | 40.0% | |
| CCAATGTTCTTTACCAGGAT+TGG | - | chr4.3:7924973-7924992 | None:intergenic | 40.0% | |
| CCAGAAACACCAAAATGTGA+TGG | + | chr4.3:7923724-7923743 | MS.gene73666:CDS | 40.0% | |
| CGCTTAGTTGTTAAAGGCTT+TGG | + | chr4.3:7924177-7924196 | MS.gene73666:intron | 40.0% | |
| GATAAGTGCTTATGCTTTGG+AGG | + | chr4.3:7925035-7925054 | MS.gene73666:intron | 40.0% | |
| GATGATGAAGATGTTCAGGA+TGG | + | chr4.3:7923856-7923875 | MS.gene73666:CDS | 40.0% | |
| GATGGTAGAAAGTCTACTTC+AGG | + | chr4.3:7925110-7925129 | MS.gene73666:intron | 40.0% | |
| GGAATGGTGTTTACTTTCTC+AGG | + | chr4.3:7925131-7925150 | MS.gene73666:intron | 40.0% | |
| GGACAAGACAAGGATATGAT+TGG | + | chr4.3:7924594-7924613 | MS.gene73666:intron | 40.0% | |
| GTAAAGACTGCATTTCTCCA+TGG | + | chr4.3:7924315-7924334 | MS.gene73666:intron | 40.0% | |
| GTACATCTGTATCACAGATG+AGG | + | chr4.3:7923954-7923973 | MS.gene73666:intron | 40.0% | |
| GTGTTCAAGCTCAAGAAAGA+TGG | + | chr4.3:7924129-7924148 | MS.gene73666:intron | 40.0% | |
| GTTGTCACAACAACAGTATG+TGG | + | chr4.3:7924725-7924744 | MS.gene73666:intron | 40.0% | |
| TACAGATGTACTCCGAACTA+GGG | - | chr4.3:7923945-7923964 | None:intergenic | 40.0% | |
| TGGGAGTTTGATGTATGCAA+TGG | + | chr4.3:7924893-7924912 | MS.gene73666:intron | 40.0% | |
| TGTTGCCTTATCAACAACAG+AGG | + | chr4.3:7925190-7925209 | MS.gene73666:intron | 40.0% | |
| TTCTGCCTCTGTTGTTGATA+AGG | - | chr4.3:7925198-7925217 | None:intergenic | 40.0% | |
| ! | GTATGAAGATTTTGCGAGAC+CGG | + | chr4.3:7924685-7924704 | MS.gene73666:intron | 40.0% |
| ! | TGGATCTTGAGGTATCTGAA+AGG | + | chr4.3:7925005-7925024 | MS.gene73666:intron | 40.0% |
| !!! | CCATCACATTTTGGTGTTTC+TGG | - | chr4.3:7923727-7923746 | None:intergenic | 40.0% |
| AACATTGGGAAGCTGTGAAG+TGG | + | chr4.3:7924985-7925004 | MS.gene73666:intron | 45.0% | |
| AAGCAGGGAAGGAAATGCTT+TGG | + | chr4.3:7925234-7925253 | MS.gene73666:intron | 45.0% | |
| AAGCGCTTTGACTGTCACAA+TGG | - | chr4.3:7925310-7925329 | None:intergenic | 45.0% | |
| AAGCTGTGAAGTGGATCTTG+AGG | + | chr4.3:7924994-7925013 | MS.gene73666:intron | 45.0% | |
| ACAATGGTCTGCATCTGTCT+TGG | - | chr4.3:7924502-7924521 | None:intergenic | 45.0% | |
| ACTCTTACAGGAGGAGTGAT+CGG | - | chr4.3:7923766-7923785 | None:intergenic | 45.0% | |
| ACTTTCGTCAACATATCCGC+AGG | - | chr4.3:7925458-7925477 | None:intergenic | 45.0% | |
| AGCAGGTTTCTTTCCAATCC+TGG | + | chr4.3:7924957-7924976 | MS.gene73666:intron | 45.0% | |
| AGGCTACACAGATGCTGATA+TGG | + | chr4.3:7925076-7925095 | MS.gene73666:intron | 45.0% | |
| ATATTGCCATGGCTGAAGCA+GGG | + | chr4.3:7925219-7925238 | MS.gene73666:intron | 45.0% | |
| ATCTACCAGGTACCCTAGTT+CGG | + | chr4.3:7923930-7923949 | MS.gene73666:intron | 45.0% | |
| ATCTCCTGAGCTGAGATGTT+GGG | - | chr4.3:7923891-7923910 | None:intergenic | 45.0% | |
| ATGCAGTTGGAGTTGTTAGC+AGG | + | chr4.3:7924940-7924959 | MS.gene73666:intron | 45.0% | |
| CATCTGTATCACAGATGAGG+GGG | + | chr4.3:7923957-7923976 | MS.gene73666:intron | 45.0% | |
| CCAACTGCATGAGCAATATC+TGG | - | chr4.3:7924930-7924949 | None:intergenic | 45.0% | |
| CCAGATATTGCTCATGCAGT+TGG | + | chr4.3:7924927-7924946 | MS.gene73666:intron | 45.0% | |
| CGAGTCTTCTCAAATCCTTC+TGG | - | chr4.3:7924372-7924391 | None:intergenic | 45.0% | |
| CTGTAAGAGTTGCCACAGAA+GGG | + | chr4.3:7923776-7923795 | MS.gene73666:CDS | 45.0% | |
| CTTGCATTGCCTTCATCCAT+TGG | - | chr4.3:7924026-7924045 | None:intergenic | 45.0% | |
| GAAAAGCCCTGAAGAACAAG+TGG | + | chr4.3:7924106-7924125 | MS.gene73666:intron | 45.0% | |
| GAACACCCACTTGTTCTTCA+GGG | - | chr4.3:7924115-7924134 | None:intergenic | 45.0% | |
| GAAGGCAATGCAAGAAGAGA+TGG | + | chr4.3:7924032-7924051 | MS.gene73666:intron | 45.0% | |
| GAGATCTTGATGAAGACCCT+AGG | + | chr4.3:7923800-7923819 | MS.gene73666:CDS | 45.0% | |
| GAGCTTGTGAAACTTCCTGA+AGG | + | chr4.3:7924081-7924100 | MS.gene73666:intron | 45.0% | |
| GATATCGTCAACCATCTACC+AGG | + | chr4.3:7923917-7923936 | MS.gene73666:CDS | 45.0% | |
| GCTTCCCAATGTTCTTTACC+AGG | - | chr4.3:7924978-7924997 | None:intergenic | 45.0% | |
| GGAGAGCCAGTAATTGAAGA+TGG | + | chr4.3:7923829-7923848 | MS.gene73666:CDS | 45.0% | |
| TACACAGATGCTGATATGGC+AGG | + | chr4.3:7925080-7925099 | MS.gene73666:intron | 45.0% | |
| TACCTTACTCCTCAGCAGTT+GGG | + | chr4.3:7924874-7924893 | MS.gene73666:intron | 45.0% | |
| TATATTGCCATGGCTGAAGC+AGG | + | chr4.3:7925218-7925237 | MS.gene73666:intron | 45.0% | |
| TGAAACAAGCTCCCAGACAA+TGG | + | chr4.3:7924436-7924455 | MS.gene73666:intron | 45.0% | |
| TGAACACCCACTTGTTCTTC+AGG | - | chr4.3:7924116-7924135 | None:intergenic | 45.0% | |
| TGATCAACTGGGAATGAAGC+AGG | + | chr4.3:7925271-7925290 | MS.gene73666:intron | 45.0% | |
| TGTAAGAGTTGCCACAGAAG+GGG | + | chr4.3:7923777-7923796 | MS.gene73666:CDS | 45.0% | |
| ! | ACCATAGCTTCCTAGCTTTC+CGG | - | chr4.3:7924707-7924726 | None:intergenic | 45.0% |
| ! | TTGTGACAGTCAAAGCGCTT+TGG | + | chr4.3:7925310-7925329 | MS.gene73666:intron | 45.0% |
| !! | AAAGGCTTTGGACAAAAGCG+AGG | + | chr4.3:7924189-7924208 | MS.gene73666:intron | 45.0% |
| !! | CAACATGAAGGGTGCTAAAC+CGG | + | chr4.3:7924767-7924786 | MS.gene73666:intron | 45.0% |
| !! | GTTGATAGTGGGACAAGACA+AGG | + | chr4.3:7924584-7924603 | MS.gene73666:intron | 45.0% |
| AATCCCCAACATCTCAGCTC+AGG | + | chr4.3:7923884-7923903 | MS.gene73666:CDS | 50.0% | |
| ACCGGAAAGCTAGGAAGCTA+TGG | + | chr4.3:7924703-7924722 | MS.gene73666:intron | 50.0% | |
| ATCAAGATCTCCCCCTTCTG+TGG | - | chr4.3:7923791-7923810 | None:intergenic | 50.0% | |
| CATCAAACTCCCAACTGCTG+AGG | - | chr4.3:7924886-7924905 | None:intergenic | 50.0% | |
| CCTGTAAGAGTTGCCACAGA+AGG | + | chr4.3:7923775-7923794 | MS.gene73666:CDS | 50.0% | |
| CCTTCTGTGGCAACTCTTAC+AGG | - | chr4.3:7923778-7923797 | None:intergenic | 50.0% | |
| GATCTCCTGAGCTGAGATGT+TGG | - | chr4.3:7923892-7923911 | None:intergenic | 50.0% | |
| GATGAAGACCCTAGGGTTGA+TGG | + | chr4.3:7923808-7923827 | MS.gene73666:CDS | 50.0% | |
| GCGATCCATGCCGATCAATT+CGG | - | chr4.3:7925510-7925529 | None:intergenic | 50.0% | |
| GGCCCTGCAAAGCAAATTCT+AGG | + | chr4.3:7924663-7924682 | MS.gene73666:intron | 50.0% | |
| GTAAGAGTTGCCACAGAAGG+GGG | + | chr4.3:7923778-7923797 | MS.gene73666:CDS | 50.0% | |
| GTACCTTACTCCTCAGCAGT+TGG | + | chr4.3:7924873-7924892 | MS.gene73666:intron | 50.0% | |
| TCTCCTGAGCTGAGATGTTG+GGG | - | chr4.3:7923890-7923909 | None:intergenic | 50.0% | |
| TCTGTGGCAACTCTTACAGG+AGG | - | chr4.3:7923775-7923794 | None:intergenic | 50.0% | |
| TTGGCTAACGACGTGCTAAC+CGG | - | chr4.3:7924789-7924808 | None:intergenic | 50.0% | |
| TTGTGCCGAATTGATCGGCA+TGG | + | chr4.3:7925502-7925521 | MS.gene73666:CDS | 50.0% | |
| ! | GAACTAGGGTACCTGGTAGA+TGG | - | chr4.3:7923931-7923950 | None:intergenic | 50.0% |
| ! | TCATTGGTTGCGTCAAGCAG+CGG | + | chr4.3:7925388-7925407 | MS.gene73666:CDS | 50.0% |
| ! | TTCAGGGCTTTTCTGCCTTC+AGG | - | chr4.3:7924099-7924118 | None:intergenic | 50.0% |
| ! | TTTTGCGAGACCGGAAAGCT+AGG | + | chr4.3:7924694-7924713 | MS.gene73666:intron | 50.0% |
| !! | GAAGACTCGAAAGGAGCACT+TGG | + | chr4.3:7924383-7924402 | MS.gene73666:intron | 50.0% |
| CTCCCAACTGCTGAGGAGTA+AGG | - | chr4.3:7924879-7924898 | None:intergenic | 55.0% | |
| GATATGGCAGGTGACCTGGA+TGG | + | chr4.3:7925092-7925111 | MS.gene73666:intron | 55.0% | |
| TATCACAGATGAGGGGGAGC+CGG | + | chr4.3:7923963-7923982 | MS.gene73666:intron | 55.0% | |
| TCTCAGGGGGAGCTGTATCA+TGG | + | chr4.3:7925147-7925166 | MS.gene73666:intron | 55.0% | |
| TGCTGATATGGCAGGTGACC+TGG | + | chr4.3:7925088-7925107 | MS.gene73666:intron | 55.0% | |
| TTCCTTCCCTGCTTCAGCCA+TGG | - | chr4.3:7925228-7925247 | None:intergenic | 55.0% | |
| ! | ACTGGCTCTCCATCAACCCT+AGG | - | chr4.3:7923820-7923839 | None:intergenic | 55.0% |
| ! | CTGGCTCTCCATCAACCCTA+GGG | - | chr4.3:7923819-7923838 | None:intergenic | 55.0% |
| ! | GTACTCCGAACTAGGGTACC+TGG | - | chr4.3:7923938-7923957 | None:intergenic | 55.0% |
| TGCCATGGCTGAAGCAGGGA+AGG | + | chr4.3:7925223-7925242 | MS.gene73666:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 7923706 | 7925535 | 7923706 | ID=MS.gene73666 |
| chr4.3 | mRNA | 7923706 | 7925535 | 7923706 | ID=MS.gene73666.t1;Parent=MS.gene73666 |
| chr4.3 | exon | 7923706 | 7923938 | 7923706 | ID=MS.gene73666.t1.exon1;Parent=MS.gene73666.t1 |
| chr4.3 | CDS | 7923706 | 7923938 | 7923706 | ID=cds.MS.gene73666.t1;Parent=MS.gene73666.t1 |
| chr4.3 | exon | 7925385 | 7925535 | 7925385 | ID=MS.gene73666.t1.exon2;Parent=MS.gene73666.t1 |
| chr4.3 | CDS | 7925385 | 7925535 | 7925385 | ID=cds.MS.gene73666.t1;Parent=MS.gene73666.t1 |
| Gene Sequence |
| Protein sequence |
