Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73740.t1 | XP_003601945.1 | 98.4 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 2.30E-208 | 734.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73740.t1 | Q8LAM0 | 82.4 | 364 | 61 | 2 | 1 | 363 | 1 | 362 | 1.6e-173 | 610.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73740.t1 | G7J3R1 | 98.4 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 1.7e-208 | 734.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050654 | MS.gene73740 | 0.813336 | 2.70E-51 | -1.69E-46 |
| MS.gene052197 | MS.gene73740 | 0.921304 | 4.25E-88 | -1.69E-46 |
| MS.gene058429 | MS.gene73740 | 0.809221 | 2.11E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73740.t1 | MTR_3g087140 | 98.361 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 0.0 | 752 |
| MS.gene73740.t1 | MTR_8g090190 | 86.501 | 363 | 49 | 0 | 1 | 363 | 1 | 363 | 0.0 | 662 |
| MS.gene73740.t1 | MTR_3g100480 | 30.347 | 346 | 190 | 10 | 23 | 360 | 584 | 886 | 3.54e-37 | 143 |
| MS.gene73740.t1 | MTR_6g022290 | 28.531 | 354 | 192 | 9 | 17 | 360 | 23 | 325 | 3.15e-35 | 135 |
| MS.gene73740.t1 | MTR_4g130940 | 30.205 | 341 | 194 | 10 | 24 | 360 | 93 | 393 | 5.71e-35 | 136 |
| MS.gene73740.t1 | MTR_3g100480 | 28.226 | 372 | 194 | 10 | 23 | 360 | 584 | 916 | 6.45e-35 | 136 |
| MS.gene73740.t1 | MTR_4g130940 | 30.205 | 341 | 194 | 10 | 24 | 360 | 93 | 393 | 6.65e-35 | 136 |
| MS.gene73740.t1 | MTR_6g022310 | 28.933 | 356 | 188 | 10 | 17 | 360 | 121 | 423 | 7.18e-35 | 135 |
| MS.gene73740.t1 | MTR_5g030360 | 29.855 | 345 | 182 | 10 | 24 | 360 | 155 | 447 | 7.55e-35 | 135 |
| MS.gene73740.t1 | MTR_5g066000 | 31.481 | 324 | 186 | 10 | 23 | 340 | 542 | 835 | 1.41e-34 | 135 |
| MS.gene73740.t1 | MTR_6g022300 | 27.666 | 347 | 190 | 9 | 24 | 360 | 68 | 363 | 1.68e-31 | 125 |
| MS.gene73740.t1 | MTR_1g014680 | 29.781 | 319 | 186 | 8 | 24 | 334 | 182 | 470 | 2.89e-31 | 125 |
| MS.gene73740.t1 | MTR_4g115880 | 26.450 | 431 | 189 | 14 | 15 | 360 | 191 | 578 | 1.60e-30 | 122 |
| MS.gene73740.t1 | MTR_1g014260 | 29.539 | 369 | 186 | 14 | 16 | 340 | 176 | 514 | 2.01e-30 | 122 |
| MS.gene73740.t1 | MTR_5g032380 | 29.102 | 323 | 190 | 8 | 23 | 338 | 424 | 714 | 3.68e-30 | 122 |
| MS.gene73740.t1 | MTR_2g070390 | 27.746 | 346 | 211 | 8 | 23 | 365 | 22 | 331 | 4.81e-29 | 119 |
| MS.gene73740.t1 | MTR_2g071620 | 30.172 | 348 | 187 | 12 | 24 | 360 | 465 | 767 | 2.30e-28 | 117 |
| MS.gene73740.t1 | MTR_1g010040 | 30.696 | 316 | 169 | 9 | 24 | 330 | 108 | 382 | 3.89e-28 | 116 |
| MS.gene73740.t1 | MTR_1g010040 | 30.696 | 316 | 169 | 9 | 24 | 330 | 108 | 382 | 4.17e-28 | 116 |
| MS.gene73740.t1 | MTR_5g430360 | 29.655 | 290 | 150 | 8 | 78 | 360 | 37 | 279 | 8.59e-28 | 114 |
| MS.gene73740.t1 | MTR_8g471100 | 26.744 | 344 | 193 | 9 | 24 | 360 | 213 | 504 | 9.19e-26 | 108 |
| MS.gene73740.t1 | MTR_8g067060 | 26.744 | 344 | 193 | 9 | 24 | 360 | 204 | 495 | 1.19e-25 | 108 |
| MS.gene73740.t1 | MTR_3g108660 | 30.794 | 315 | 170 | 11 | 24 | 330 | 108 | 382 | 2.60e-25 | 108 |
| MS.gene73740.t1 | MTR_3g108660 | 30.794 | 315 | 170 | 11 | 24 | 330 | 108 | 382 | 2.67e-25 | 108 |
| MS.gene73740.t1 | MTR_2g060050 | 27.100 | 369 | 221 | 13 | 24 | 363 | 183 | 532 | 8.43e-22 | 97.1 |
| MS.gene73740.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 201 | 477 | 3.60e-21 | 95.9 |
| MS.gene73740.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 202 | 478 | 3.98e-21 | 95.5 |
| MS.gene73740.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 200 | 476 | 4.05e-21 | 95.5 |
| MS.gene73740.t1 | MTR_8g064910 | 25.072 | 347 | 201 | 13 | 24 | 360 | 55 | 352 | 2.97e-19 | 89.0 |
| MS.gene73740.t1 | MTR_4g111860 | 25.496 | 353 | 195 | 11 | 24 | 360 | 88 | 388 | 7.74e-19 | 87.8 |
| MS.gene73740.t1 | MTR_7g088760 | 33.129 | 163 | 87 | 5 | 208 | 363 | 754 | 901 | 3.27e-16 | 80.9 |
| MS.gene73740.t1 | MTR_7g088760 | 33.129 | 163 | 87 | 5 | 208 | 363 | 771 | 918 | 3.30e-16 | 80.9 |
| MS.gene73740.t1 | MTR_2g087710 | 27.234 | 235 | 141 | 8 | 137 | 364 | 652 | 863 | 1.22e-14 | 75.9 |
| MS.gene73740.t1 | MTR_7g106570 | 29.778 | 225 | 127 | 10 | 153 | 363 | 681 | 888 | 4.60e-14 | 73.9 |
| MS.gene73740.t1 | MTR_1g077980 | 29.091 | 165 | 96 | 5 | 208 | 366 | 765 | 914 | 4.47e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73740.t1 | AT2G22310 | 82.418 | 364 | 61 | 2 | 1 | 363 | 1 | 362 | 0.0 | 629 |
| MS.gene73740.t1 | AT4G39910 | 81.471 | 367 | 64 | 3 | 1 | 363 | 1 | 367 | 0.0 | 624 |
| MS.gene73740.t1 | AT2G22310 | 81.763 | 329 | 57 | 2 | 36 | 363 | 4 | 330 | 0.0 | 561 |
| MS.gene73740.t1 | AT2G22310 | 81.846 | 325 | 56 | 2 | 40 | 363 | 3 | 325 | 0.0 | 555 |
| MS.gene73740.t1 | AT4G24560 | 28.280 | 343 | 199 | 10 | 24 | 360 | 543 | 844 | 4.17e-36 | 140 |
| MS.gene73740.t1 | AT5G57990 | 29.070 | 344 | 193 | 13 | 24 | 360 | 108 | 407 | 7.49e-34 | 133 |
| MS.gene73740.t1 | AT3G14400 | 28.530 | 347 | 211 | 7 | 23 | 365 | 24 | 337 | 2.43e-32 | 128 |
| MS.gene73740.t1 | AT5G65450 | 30.063 | 316 | 181 | 10 | 23 | 330 | 348 | 631 | 1.99e-31 | 125 |
| MS.gene73740.t1 | AT5G65450 | 29.747 | 316 | 182 | 9 | 23 | 330 | 329 | 612 | 2.50e-31 | 125 |
| MS.gene73740.t1 | AT4G31670 | 28.213 | 319 | 191 | 10 | 24 | 334 | 169 | 457 | 1.15e-30 | 123 |
| MS.gene73740.t1 | AT2G24640 | 27.900 | 319 | 192 | 9 | 24 | 334 | 5 | 293 | 2.99e-28 | 115 |
| MS.gene73740.t1 | AT2G24640 | 27.900 | 319 | 192 | 9 | 24 | 334 | 175 | 463 | 3.55e-28 | 116 |
| MS.gene73740.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 439 | 741 | 6.89e-27 | 112 |
| MS.gene73740.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 439 | 741 | 6.89e-27 | 112 |
| MS.gene73740.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 443 | 745 | 7.30e-27 | 112 |
| MS.gene73740.t1 | AT4G17895 | 29.014 | 355 | 176 | 12 | 24 | 360 | 177 | 473 | 4.22e-25 | 107 |
| MS.gene73740.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 3.10e-24 | 105 |
| MS.gene73740.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 3.10e-24 | 105 |
| MS.gene73740.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 4.06e-24 | 104 |
| MS.gene73740.t1 | AT5G46740 | 28.696 | 345 | 196 | 10 | 24 | 360 | 164 | 466 | 1.83e-22 | 99.4 |
| MS.gene73740.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 197 | 498 | 1.21e-20 | 94.4 |
| MS.gene73740.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 197 | 498 | 1.21e-20 | 94.4 |
| MS.gene73740.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 196 | 497 | 1.26e-20 | 94.4 |
| MS.gene73740.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 196 | 497 | 1.26e-20 | 94.4 |
| MS.gene73740.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 198 | 521 | 1.61e-20 | 94.0 |
| MS.gene73740.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 197 | 520 | 1.94e-20 | 93.6 |
| MS.gene73740.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 198 | 521 | 2.12e-20 | 93.6 |
| MS.gene73740.t1 | AT5G10790 | 24.737 | 380 | 200 | 11 | 15 | 339 | 42 | 390 | 1.11e-18 | 87.4 |
| MS.gene73740.t1 | AT5G10790 | 24.474 | 380 | 201 | 11 | 15 | 339 | 171 | 519 | 2.89e-18 | 86.7 |
| MS.gene73740.t1 | AT5G46740 | 28.405 | 257 | 139 | 7 | 110 | 360 | 40 | 257 | 2.70e-16 | 80.5 |
| MS.gene73740.t1 | AT5G22030 | 30.723 | 166 | 94 | 6 | 204 | 363 | 761 | 911 | 9.60e-14 | 73.2 |
| MS.gene73740.t1 | AT5G22030 | 30.723 | 166 | 94 | 6 | 204 | 363 | 719 | 869 | 1.02e-13 | 73.2 |
| MS.gene73740.t1 | AT2G40930 | 31.250 | 160 | 88 | 6 | 208 | 360 | 769 | 913 | 1.21e-13 | 72.8 |
| MS.gene73740.t1 | AT2G40930 | 31.250 | 160 | 88 | 6 | 208 | 360 | 769 | 913 | 1.21e-13 | 72.8 |
| MS.gene73740.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene73740.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene73740.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene73740.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene73740.t1 | AT4G10570 | 31.325 | 166 | 93 | 6 | 204 | 363 | 745 | 895 | 1.07e-11 | 67.0 |
| MS.gene73740.t1 | AT1G32850 | 29.651 | 172 | 96 | 7 | 203 | 366 | 729 | 883 | 2.44e-11 | 65.9 |
Find 63 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCAGTGCAGACATTCTT+TGG | 0.226632 | 3.1:+70120727 | MS.gene73740:CDS |
| TCACACCTGTCTTCCTCTTC+TGG | 0.239068 | 3.1:-70118539 | None:intergenic |
| GAACAATTGCTACAATATTA+TGG | 0.282416 | 3.1:+70117441 | MS.gene73740:CDS |
| AAATGAACTTGTTGACATTC+TGG | 0.297380 | 3.1:+70119418 | MS.gene73740:CDS |
| CAACCTCTGTACAAATCGTT+TGG | 0.322213 | 3.1:-70118568 | None:intergenic |
| CCAAAGTAATGTTCTCCTTC+AGG | 0.328815 | 3.1:-70116575 | None:intergenic |
| TACTTTGGCCTCGAGAATTT+CGG | 0.330275 | 3.1:+70116590 | MS.gene73740:CDS |
| CAAAACATAACCAGTGGTTA+TGG | 0.364423 | 3.1:-70120675 | None:intergenic |
| TTGCAAGCACCTTGTCTCAT+TGG | 0.376816 | 3.1:-70119850 | None:intergenic |
| TTGCAGTAGTTGTCCATGTT+GGG | 0.380146 | 3.1:+70120611 | MS.gene73740:CDS |
| CCATTAGCTAAACCACTCTT+TGG | 0.383199 | 3.1:-70119509 | None:intergenic |
| CTTCAGTGCAGACATTCTTT+GGG | 0.391927 | 3.1:+70120728 | MS.gene73740:CDS |
| TGTAGCAATTGTTCTCGAAA+TGG | 0.394146 | 3.1:-70117432 | None:intergenic |
| AACCTCTGTACAAATCGTTT+GGG | 0.398526 | 3.1:-70118567 | None:intergenic |
| AACGCGCTTATGGGTGGTTC+TGG | 0.402741 | 3.1:+70116518 | None:intergenic |
| TTGTCTTTCCCCTTGAACTC+AGG | 0.435602 | 3.1:+70120545 | MS.gene73740:CDS |
| CACACCTGTCTTCCTCTTCT+GGG | 0.437291 | 3.1:-70118538 | None:intergenic |
| TATCACTCAACCTGAGTTCA+AGG | 0.443968 | 3.1:-70120555 | None:intergenic |
| CCTGAAGGAGAACATTACTT+TGG | 0.451777 | 3.1:+70116575 | MS.gene73740:CDS |
| CCAAAGAGTGGTTTAGCTAA+TGG | 0.456689 | 3.1:+70119509 | MS.gene73740:CDS |
| CAAAGTAATGTTCTCCTTCA+GGG | 0.463000 | 3.1:-70116574 | None:intergenic |
| AAAAGAGCCTTTAGCTACTT+GGG | 0.466028 | 3.1:+70119538 | MS.gene73740:CDS |
| TTGTGCACCCAAGTAGCTAA+AGG | 0.471803 | 3.1:-70119545 | None:intergenic |
| TTTGCAGTAGTTGTCCATGT+TGG | 0.472175 | 3.1:+70120610 | MS.gene73740:CDS |
| ACAAATAGTTCAAGAACTCA+TGG | 0.473994 | 3.1:-70119394 | None:intergenic |
| CAGACATAATGTCCGTGGTT+GGG | 0.501159 | 3.1:-70120640 | None:intergenic |
| TAGTTGTCCATGTTGGGAGT+GGG | 0.524445 | 3.1:+70120617 | MS.gene73740:CDS |
| TCTAAACTCGAGAAGGCTCT+CGG | 0.528934 | 3.1:+70116542 | MS.gene73740:CDS |
| AGTTCCCAGAAGAGGAAGAC+AGG | 0.531654 | 3.1:+70118534 | MS.gene73740:CDS |
| GTAGTTGTCCATGTTGGGAG+TGG | 0.545060 | 3.1:+70120616 | MS.gene73740:CDS |
| GGTTGGGCCCACTCCCAACA+TGG | 0.549398 | 3.1:-70120624 | None:intergenic |
| GTTTGCAAGAAGCTCAGAAG+AGG | 0.550711 | 3.1:+70120425 | MS.gene73740:intron |
| ATCACTCAACCTGAGTTCAA+GGG | 0.571357 | 3.1:-70120554 | None:intergenic |
| GCAGACATAATGTCCGTGGT+TGG | 0.577071 | 3.1:-70120641 | None:intergenic |
| CTCCCAAACGATTTGTACAG+AGG | 0.577523 | 3.1:+70118565 | MS.gene73740:CDS |
| TATAGATAAGTTCCCAGAAG+AGG | 0.577641 | 3.1:+70118526 | MS.gene73740:intron |
| CTTCCGTAGCTATATGCACC+AGG | 0.590612 | 3.1:+70118608 | MS.gene73740:CDS |
| TTCTGGTTCTAAACTCGAGA+AGG | 0.590698 | 3.1:+70116535 | MS.gene73740:CDS |
| CAAATAGTTCAAGAACTCAT+GGG | 0.594052 | 3.1:-70119393 | None:intergenic |
| GTTGGGAGTGGGCCCAACCA+CGG | 0.596385 | 3.1:+70120628 | MS.gene73740:CDS |
| AATGTGAAACTGTTACCGCT+AGG | 0.596426 | 3.1:+70119871 | MS.gene73740:CDS |
| CCATTCGCAATCTTCTCAGA+AGG | 0.599118 | 3.1:-70119485 | None:intergenic |
| CAATTCAACGCGCTTATGGG+TGG | 0.601033 | 3.1:+70116512 | None:intergenic |
| TTTAAGTACATGGAACAGCT+GGG | 0.603531 | 3.1:+70120496 | MS.gene73740:CDS |
| GTACCTGGTGCATATAGCTA+CGG | 0.605797 | 3.1:-70118611 | None:intergenic |
| ATTGCGAATGGACCAAAGAG+TGG | 0.607250 | 3.1:+70119497 | MS.gene73740:CDS |
| CGTAAAACAAAATGTAACCA+TGG | 0.617281 | 3.1:-70120780 | None:intergenic |
| CTCGGCGATAATTTCCCTGA+AGG | 0.623448 | 3.1:+70116560 | MS.gene73740:CDS |
| TCACTCAACCTGAGTTCAAG+GGG | 0.625682 | 3.1:-70120553 | None:intergenic |
| TTCAACAATAATACAGACCA+TGG | 0.626392 | 3.1:+70120763 | MS.gene73740:CDS |
| CCTTCTGAGAAGATTGCGAA+TGG | 0.627827 | 3.1:+70119485 | MS.gene73740:CDS |
| ATGTGAAACTGTTACCGCTA+GGG | 0.633533 | 3.1:+70119872 | MS.gene73740:CDS |
| CAAGGCAGACATAATGTCCG+TGG | 0.637860 | 3.1:-70120645 | None:intergenic |
| CATCGTCAAAACATAACCAG+TGG | 0.638198 | 3.1:-70120681 | None:intergenic |
| AGATGAATGACCAAGACACG+TGG | 0.653059 | 3.1:-70120466 | None:intergenic |
| GATGAATGACCAAGACACGT+GGG | 0.658347 | 3.1:-70120465 | None:intergenic |
| ATGAATGACCAAGACACGTG+GGG | 0.659217 | 3.1:-70120464 | None:intergenic |
| AAGTATTGCCGAAATTCTCG+AGG | 0.684941 | 3.1:-70116598 | None:intergenic |
| TGAATGACCAAGACACGTGG+GGG | 0.688525 | 3.1:-70120463 | None:intergenic |
| GGTAAGACAGCTTCTTGTAG+CGG | 0.692354 | 3.1:-70120519 | None:intergenic |
| TGACGATGAAACTGTCGAGG+TGG | 0.694271 | 3.1:+70120696 | MS.gene73740:CDS |
| GTTCAAGGGGAAAGACAACA+CGG | 0.707575 | 3.1:-70120540 | None:intergenic |
| GAATACTTACCAATGAGACA+AGG | 0.751910 | 3.1:+70119841 | MS.gene73740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATTTATTATATGTATTT+GGG | + | chr3.1:70117180-70117199 | MS.gene73740:intron | 10.0% |
| !! | TACTATTTATTATATGTATT+TGG | + | chr3.1:70117179-70117198 | MS.gene73740:intron | 10.0% |
| !! | TTAAAAAAAAGTAGTAAAAT+AGG | - | chr3.1:70120059-70120078 | None:intergenic | 10.0% |
| !!! | AGATTTTTAAATTTTCATTT+CGG | + | chr3.1:70119787-70119806 | MS.gene73740:intron | 10.0% |
| !!! | ATTTTACTACTTTTTTTTAA+AGG | + | chr3.1:70120059-70120078 | MS.gene73740:intron | 10.0% |
| !!! | TTTTACTACTTTTTTTTAAA+GGG | + | chr3.1:70120060-70120079 | MS.gene73740:intron | 10.0% |
| !! | AGATATTATTAAAAAAGAGA+CGG | + | chr3.1:70117750-70117769 | MS.gene73740:intron | 15.0% |
| !! | TATGATTATAGAATTTATAC+TGG | + | chr3.1:70117612-70117631 | MS.gene73740:intron | 15.0% |
| !!! | GTTATTTTATTTTTGTTAGA+AGG | + | chr3.1:70119119-70119138 | MS.gene73740:intron | 15.0% |
| !!! | TCTCTTTTTTAATAATATCT+GGG | - | chr3.1:70117750-70117769 | None:intergenic | 15.0% |
| !!! | TTTACTCTAAAATAAACTTA+AGG | - | chr3.1:70116873-70116892 | None:intergenic | 15.0% |
| !!! | TTTTTATTACTTTTAGTAAG+AGG | + | chr3.1:70120083-70120102 | MS.gene73740:intron | 15.0% |
| !! | AAATACAATAGCTAACAAAA+AGG | - | chr3.1:70118122-70118141 | None:intergenic | 20.0% |
| !! | ATAGTAAGTTGTTAAAATAC+GGG | + | chr3.1:70117021-70117040 | MS.gene73740:intron | 20.0% |
| !! | ATCTATATCAAGAAATAACA+TGG | - | chr3.1:70118513-70118532 | None:intergenic | 20.0% |
| !! | ATGAAATGAATGTTTCAAAA+AGG | + | chr3.1:70116936-70116955 | MS.gene73740:intron | 20.0% |
| !! | ATTAACAACTTCACAATTTA+TGG | - | chr3.1:70119641-70119660 | None:intergenic | 20.0% |
| !! | GAGATTATGAATATATCAAA+AGG | - | chr3.1:70117109-70117128 | None:intergenic | 20.0% |
| !! | GATAGTAAGTTGTTAAAATA+CGG | + | chr3.1:70117020-70117039 | MS.gene73740:intron | 20.0% |
| !! | TAAAGAAATACATCAATAAG+AGG | - | chr3.1:70119305-70119324 | None:intergenic | 20.0% |
| !! | TAAAGCAGAATAATAAACAA+TGG | - | chr3.1:70117900-70117919 | None:intergenic | 20.0% |
| !! | TGGTTAAAAAGTTACTAATT+TGG | - | chr3.1:70117704-70117723 | None:intergenic | 20.0% |
| !! | TTAAAAAGTTACTAATTTGG+TGG | - | chr3.1:70117701-70117720 | None:intergenic | 20.0% |
| !! | TTGAAACATTCATTTCATAA+TGG | - | chr3.1:70116934-70116953 | None:intergenic | 20.0% |
| !! | TTGATATATTCATAATCTCA+AGG | + | chr3.1:70117110-70117129 | MS.gene73740:intron | 20.0% |
| !!! | ATTATTGTTTTGCTGAATTT+AGG | + | chr3.1:70116791-70116810 | MS.gene73740:intron | 20.0% |
| !!! | CTAATTTTTAGTCTTACTAT+TGG | + | chr3.1:70117249-70117268 | MS.gene73740:intron | 20.0% |
| !!! | CTCTTTTTTAATAATATCTG+GGG | - | chr3.1:70117749-70117768 | None:intergenic | 20.0% |
| !!! | GTCTCTTTTTTAATAATATC+TGG | - | chr3.1:70117751-70117770 | None:intergenic | 20.0% |
| !!! | TAAAAATATTTTCTGCTCAA+GGG | - | chr3.1:70119014-70119033 | None:intergenic | 20.0% |
| !!! | TATTTTCTAAATTCTGAATC+TGG | - | chr3.1:70116674-70116693 | None:intergenic | 20.0% |
| !!! | TCTTATTTTTGTGATCATTA+TGG | - | chr3.1:70119770-70119789 | None:intergenic | 20.0% |
| !!! | TTAAAAATATTTTCTGCTCA+AGG | - | chr3.1:70119015-70119034 | None:intergenic | 20.0% |
| !!! | TTAATCTTCTCATATTTTGT+AGG | + | chr3.1:70119367-70119386 | MS.gene73740:intron | 20.0% |
| !!! | TTTTTGTTAGCTATTGTATT+TGG | + | chr3.1:70118121-70118140 | MS.gene73740:intron | 20.0% |
| ! | AAACATTCATTTCATAATGG+TGG | - | chr3.1:70116931-70116950 | None:intergenic | 25.0% |
| ! | AAACCACAAATTTAGTTACA+AGG | - | chr3.1:70117376-70117395 | None:intergenic | 25.0% |
| ! | AAACTACACATTTGAAAAAC+AGG | - | chr3.1:70119271-70119290 | None:intergenic | 25.0% |
| ! | AACATTCATTTCATAATGGT+GGG | - | chr3.1:70116930-70116949 | None:intergenic | 25.0% |
| ! | AATTAAATCTAGTATGCAGT+GGG | + | chr3.1:70119666-70119685 | MS.gene73740:intron | 25.0% |
| ! | AGGAACATAAATGTTAACTA+AGG | - | chr3.1:70118102-70118121 | None:intergenic | 25.0% |
| ! | ATACCTTGTAACTAAATTTG+TGG | + | chr3.1:70117370-70117389 | MS.gene73740:intron | 25.0% |
| ! | ATGAATATATCAAAAGGTTC+CGG | - | chr3.1:70117103-70117122 | None:intergenic | 25.0% |
| ! | ATTATAGAATTTATACTGGC+TGG | + | chr3.1:70117616-70117635 | MS.gene73740:intron | 25.0% |
| ! | ATTATATTCATAACCCTTTC+AGG | - | chr3.1:70120324-70120343 | None:intergenic | 25.0% |
| ! | GAACAATTGCTACAATATTA+TGG | + | chr3.1:70117441-70117460 | MS.gene73740:CDS | 25.0% |
| ! | GATAAACTTAACCAATAGTA+GGG | - | chr3.1:70118040-70118059 | None:intergenic | 25.0% |
| ! | TAGATAATATTGAAGCCATT+TGG | - | chr3.1:70120137-70120156 | None:intergenic | 25.0% |
| ! | TCAAAAGAAAGATTGCATTT+CGG | - | chr3.1:70120400-70120419 | None:intergenic | 25.0% |
| ! | TGATAAACTTAACCAATAGT+AGG | - | chr3.1:70118041-70118060 | None:intergenic | 25.0% |
| ! | TTCGTCAAACAATGAATATT+AGG | + | chr3.1:70116817-70116836 | MS.gene73740:intron | 25.0% |
| !! | AAAATTAGTTGGTCTAAGTA+TGG | - | chr3.1:70117724-70117743 | None:intergenic | 25.0% |
| !! | AAATGATGCCATTCTAATTT+TGG | - | chr3.1:70117817-70117836 | None:intergenic | 25.0% |
| !! | AATATTAGGATGAGTTTGTT+TGG | + | chr3.1:70116831-70116850 | MS.gene73740:intron | 25.0% |
| !! | ACTAGTAATATGATGTTTTC+TGG | + | chr3.1:70120218-70120237 | MS.gene73740:intron | 25.0% |
| !! | ATGTATGTACTTTGTTTATG+AGG | + | chr3.1:70117205-70117224 | MS.gene73740:intron | 25.0% |
| !! | CTAGTAATATGATGTTTTCT+GGG | + | chr3.1:70120219-70120238 | MS.gene73740:intron | 25.0% |
| !! | TAACTAAGGAAACAGATTTT+AGG | - | chr3.1:70118088-70118107 | None:intergenic | 25.0% |
| !! | TACTATTGGTTAAGTTTATC+AGG | + | chr3.1:70118040-70118059 | MS.gene73740:intron | 25.0% |
| !!! | GTTTTAAATTGCTTTGATCA+GGG | + | chr3.1:70119819-70119838 | MS.gene73740:intron | 25.0% |
| !!! | TGTCTTGTTTATTTCTTTCA+TGG | + | chr3.1:70118476-70118495 | MS.gene73740:intron | 25.0% |
| !!! | TGTTTTAAATTGCTTTGATC+AGG | + | chr3.1:70119818-70119837 | MS.gene73740:intron | 25.0% |
| !!! | TTTGTAGGTCACTTTTAAAT+AGG | - | chr3.1:70117137-70117156 | None:intergenic | 25.0% |
| !!! | TTTTAGTCTTACTATTGGAA+AGG | + | chr3.1:70117254-70117273 | MS.gene73740:intron | 25.0% |
| AAAAAACATTTCATCCCTAG+CGG | - | chr3.1:70119889-70119908 | None:intergenic | 30.0% | |
| AAAAGTGACCTACAAAATGA+GGG | + | chr3.1:70117141-70117160 | MS.gene73740:intron | 30.0% | |
| AAACCACCAAATTCTTTGTA+GGG | + | chr3.1:70116890-70116909 | MS.gene73740:intron | 30.0% | |
| AAATTCCCTTAGTAACAACT+TGG | - | chr3.1:70118013-70118032 | None:intergenic | 30.0% | |
| AACACATGTAGAATGAATAG+TGG | - | chr3.1:70117972-70117991 | None:intergenic | 30.0% | |
| ACAAAATGAGGGACTAATAT+GGG | + | chr3.1:70117152-70117171 | MS.gene73740:intron | 30.0% | |
| ACAAATAGTTCAAGAACTCA+TGG | - | chr3.1:70119397-70119416 | None:intergenic | 30.0% | |
| ACACATGTAGAATGAATAGT+GGG | - | chr3.1:70117971-70117990 | None:intergenic | 30.0% | |
| ATCATTTGCAAATTGTAGCT+AGG | + | chr3.1:70117830-70117849 | MS.gene73740:intron | 30.0% | |
| ATTCTATGCATTACTCTTGA+AGG | - | chr3.1:70118703-70118722 | None:intergenic | 30.0% | |
| CAAATAGTTCAAGAACTCAT+GGG | - | chr3.1:70119396-70119415 | None:intergenic | 30.0% | |
| CAATGATCTACCAATTGAAA+TGG | - | chr3.1:70118862-70118881 | None:intergenic | 30.0% | |
| CAATTAAATCTAGTATGCAG+TGG | + | chr3.1:70119665-70119684 | MS.gene73740:intron | 30.0% | |
| CACATGTTATTGATGTTACA+TGG | + | chr3.1:70117660-70117679 | MS.gene73740:intron | 30.0% | |
| CAGAATAATAAACAATGGCA+TGG | - | chr3.1:70117895-70117914 | None:intergenic | 30.0% | |
| CATTATGGAGTACAAGTAAT+AGG | - | chr3.1:70119755-70119774 | None:intergenic | 30.0% | |
| CATTTCAATTGGTAGATCAT+TGG | + | chr3.1:70118860-70118879 | MS.gene73740:intron | 30.0% | |
| CGTAAAACAAAATGTAACCA+TGG | - | chr3.1:70120783-70120802 | None:intergenic | 30.0% | |
| GCATATTCAGAATATCTAGA+CGG | + | chr3.1:70117314-70117333 | MS.gene73740:intron | 30.0% | |
| TAAAAGTGACCTACAAAATG+AGG | + | chr3.1:70117140-70117159 | MS.gene73740:intron | 30.0% | |
| TAAACCACCAAATTCTTTGT+AGG | + | chr3.1:70116889-70116908 | MS.gene73740:intron | 30.0% | |
| TACAAAATGAGGGACTAATA+TGG | + | chr3.1:70117151-70117170 | MS.gene73740:intron | 30.0% | |
| TAGCTTATAGTTGAACTTGA+TGG | + | chr3.1:70118937-70118956 | MS.gene73740:intron | 30.0% | |
| TAGGTTAACAATCCATTGAT+TGG | + | chr3.1:70120279-70120298 | MS.gene73740:intron | 30.0% | |
| TATTGATGTTACATGGATGA+AGG | + | chr3.1:70117667-70117686 | MS.gene73740:intron | 30.0% | |
| TGAAGTTGTTAATTGCTCAT+TGG | + | chr3.1:70119729-70119748 | MS.gene73740:intron | 30.0% | |
| TGAATGTGTTATGGAAACAA+AGG | - | chr3.1:70119163-70119182 | None:intergenic | 30.0% | |
| TGAGAAAAATTGCCAATCAA+TGG | - | chr3.1:70120294-70120313 | None:intergenic | 30.0% | |
| TTAACCACTTACCATCAATT+AGG | - | chr3.1:70117048-70117067 | None:intergenic | 30.0% | |
| TTCAACAATAATACAGACCA+TGG | + | chr3.1:70120763-70120782 | MS.gene73740:CDS | 30.0% | |
| TTCTACAAGGGAAACAAAAA+AGG | - | chr3.1:70118149-70118168 | None:intergenic | 30.0% | |
| TTGTAAAAAACCATAACCAC+TGG | + | chr3.1:70120665-70120684 | MS.gene73740:CDS | 30.0% | |
| ! | AAGTTACTAATTTGGTGGAT+TGG | - | chr3.1:70117696-70117715 | None:intergenic | 30.0% |
| ! | ATATTAGTCCCTCATTTTGT+AGG | - | chr3.1:70117152-70117171 | None:intergenic | 30.0% |
| ! | TATAGTTGAACTTGATGGTT+AGG | + | chr3.1:70118942-70118961 | MS.gene73740:intron | 30.0% |
| ! | TATCTGGGGTAAAAATTAGT+TGG | - | chr3.1:70117735-70117754 | None:intergenic | 30.0% |
| ! | TATGATGTTTTCTGGGTATA+TGG | + | chr3.1:70120226-70120245 | MS.gene73740:intron | 30.0% |
| ! | TTCTCATTGATTACCTGAAA+GGG | + | chr3.1:70120308-70120327 | MS.gene73740:intron | 30.0% |
| ! | TTTCTCATTGATTACCTGAA+AGG | + | chr3.1:70120307-70120326 | MS.gene73740:intron | 30.0% |
| !! | AAATGAACTTGTTGACATTC+TGG | + | chr3.1:70119418-70119437 | MS.gene73740:CDS | 30.0% |
| !! | CTAAAAACAGTTTTGCTATC+GGG | - | chr3.1:70118920-70118939 | None:intergenic | 30.0% |
| !! | GCTAAAAACAGTTTTGCTAT+CGG | - | chr3.1:70118921-70118940 | None:intergenic | 30.0% |
| !! | TCTTAAGCGTTTTAAGTACA+TGG | + | chr3.1:70120486-70120505 | MS.gene73740:CDS | 30.0% |
| !! | TTTTTGTTTCCCTTGTAGAA+TGG | + | chr3.1:70118149-70118168 | MS.gene73740:intron | 30.0% |
| !!! | AAATTAGTTTTGCTACTCGT+TGG | - | chr3.1:70117236-70117255 | None:intergenic | 30.0% |
| !!! | AGTGGTTATGGTTTTTTACA+AGG | - | chr3.1:70120666-70120685 | None:intergenic | 30.0% |
| !!! | GTTTTTTCTTCTCATTCTAC+AGG | + | chr3.1:70117392-70117411 | MS.gene73740:intron | 30.0% |
| AAAAAGAGCCTTTAGCTACT+TGG | + | chr3.1:70119537-70119556 | MS.gene73740:CDS | 35.0% | |
| AAAAGAGCCTTTAGCTACTT+GGG | + | chr3.1:70119538-70119557 | MS.gene73740:CDS | 35.0% | |
| AAAATACGGGACCTAATTGA+TGG | + | chr3.1:70117034-70117053 | MS.gene73740:intron | 35.0% | |
| AACCTCTGTACAAATCGTTT+GGG | - | chr3.1:70118570-70118589 | None:intergenic | 35.0% | |
| AATAAACAATGGCATGGAGA+TGG | - | chr3.1:70117889-70117908 | None:intergenic | 35.0% | |
| AGTAACAACTTGGAGAGAAA+AGG | - | chr3.1:70118003-70118022 | None:intergenic | 35.0% | |
| ATACAATGATATGAGTCGCT+TGG | - | chr3.1:70118892-70118911 | None:intergenic | 35.0% | |
| CAAAACATAACCAGTGGTTA+TGG | - | chr3.1:70120678-70120697 | None:intergenic | 35.0% | |
| CAAAATGAGGGACTAATATG+GGG | + | chr3.1:70117153-70117172 | MS.gene73740:intron | 35.0% | |
| CAAAGTAATGTTCTCCTTCA+GGG | - | chr3.1:70116577-70116596 | None:intergenic | 35.0% | |
| CAAAGTTGCACCATTTCAAT+TGG | + | chr3.1:70118849-70118868 | MS.gene73740:intron | 35.0% | |
| CATTCAGTGAGGTTGAATAA+CGG | + | chr3.1:70119177-70119196 | MS.gene73740:intron | 35.0% | |
| CTTGACAGTTTAATAGAGTC+CGG | + | chr3.1:70117081-70117100 | MS.gene73740:intron | 35.0% | |
| GAATACTTACCAATGAGACA+AGG | + | chr3.1:70119841-70119860 | MS.gene73740:CDS | 35.0% | |
| GAGGTATAAGAAATTGGAAG+AGG | + | chr3.1:70118337-70118356 | MS.gene73740:intron | 35.0% | |
| GATCTTCTGATAGCATATGA+AGG | + | chr3.1:70116989-70117008 | MS.gene73740:intron | 35.0% | |
| GGAATTTCATACCCTACTAT+TGG | + | chr3.1:70118026-70118045 | MS.gene73740:intron | 35.0% | |
| GTGACCATCCAAAATTAGAA+TGG | + | chr3.1:70117806-70117825 | MS.gene73740:intron | 35.0% | |
| GTTTGTTTGGCATTAGCATT+TGG | + | chr3.1:70116844-70116863 | MS.gene73740:intron | 35.0% | |
| TAAGTTTATCAGGACATGAC+TGG | + | chr3.1:70118050-70118069 | MS.gene73740:intron | 35.0% | |
| TACAATGATATGAGTCGCTT+GGG | - | chr3.1:70118891-70118910 | None:intergenic | 35.0% | |
| TATAGATAAGTTCCCAGAAG+AGG | + | chr3.1:70118526-70118545 | MS.gene73740:intron | 35.0% | |
| TCGGTTGAGGTATAAGAAAT+TGG | + | chr3.1:70118331-70118350 | MS.gene73740:intron | 35.0% | |
| TCTCTCCAAGTTGTTACTAA+GGG | + | chr3.1:70118005-70118024 | MS.gene73740:intron | 35.0% | |
| TGATGAGCATGAATCTTGAT+AGG | + | chr3.1:70120260-70120279 | MS.gene73740:intron | 35.0% | |
| TGTAGCAATTGTTCTCGAAA+TGG | - | chr3.1:70117435-70117454 | None:intergenic | 35.0% | |
| TGTCAGTTTGAAAATGTACC+TGG | - | chr3.1:70118629-70118648 | None:intergenic | 35.0% | |
| TTAGCCAATCAAATACGAAG+AGG | - | chr3.1:70117583-70117602 | None:intergenic | 35.0% | |
| TTCTCTCCAAGTTGTTACTA+AGG | + | chr3.1:70118004-70118023 | MS.gene73740:intron | 35.0% | |
| TTGTACATGTGTACAGTGTT+TGG | + | chr3.1:70118729-70118748 | MS.gene73740:intron | 35.0% | |
| TTTAAGTACATGGAACAGCT+GGG | + | chr3.1:70120496-70120515 | MS.gene73740:CDS | 35.0% | |
| TTTCCATAACACATTCAGTG+AGG | + | chr3.1:70119166-70119185 | MS.gene73740:intron | 35.0% | |
| ! | CTAATTTTGGATGGTCACAA+AGG | - | chr3.1:70117804-70117823 | None:intergenic | 35.0% |
| ! | CTTAGCTGAACTATTTTCAC+AGG | + | chr3.1:70117509-70117528 | MS.gene73740:CDS | 35.0% |
| ! | GATGCCATTCTAATTTTGGA+TGG | - | chr3.1:70117813-70117832 | None:intergenic | 35.0% |
| ! | GCGTTTTACACTATCAATGT+GGG | - | chr3.1:70117927-70117946 | None:intergenic | 35.0% |
| ! | TCAACCGAAAAGCACAAAAA+GGG | - | chr3.1:70118319-70118338 | None:intergenic | 35.0% |
| ! | TGTACTTTGTTTATGAGGTC+AGG | + | chr3.1:70117210-70117229 | MS.gene73740:intron | 35.0% |
| ! | TTCTCCCTTTTTGTGCTTTT+CGG | + | chr3.1:70118312-70118331 | MS.gene73740:intron | 35.0% |
| !! | TTTTAAGTACATGGAACAGC+TGG | + | chr3.1:70120495-70120514 | MS.gene73740:CDS | 35.0% |
| !!! | AAATTGGAAGAGGTGCTTTT+CGG | + | chr3.1:70118347-70118366 | MS.gene73740:intron | 35.0% |
| AAAGATCTCTCTACCTGAAC+TGG | + | chr3.1:70119038-70119057 | MS.gene73740:intron | 40.0% | |
| AATGTGAAACTGTTACCGCT+AGG | + | chr3.1:70119871-70119890 | MS.gene73740:CDS | 40.0% | |
| ACGTAGATTGCATTTCTGAC+AGG | - | chr3.1:70119101-70119120 | None:intergenic | 40.0% | |
| ATCACTCAACCTGAGTTCAA+GGG | - | chr3.1:70120557-70120576 | None:intergenic | 40.0% | |
| ATCTTTCTTGCAGCAAAGCT+TGG | + | chr3.1:70119610-70119629 | MS.gene73740:intron | 40.0% | |
| ATGTGAAACTGTTACCGCTA+GGG | + | chr3.1:70119872-70119891 | MS.gene73740:CDS | 40.0% | |
| CAACCTCACTGAATGTGTTA+TGG | - | chr3.1:70119172-70119191 | None:intergenic | 40.0% | |
| CAACCTCTGTACAAATCGTT+TGG | - | chr3.1:70118571-70118590 | None:intergenic | 40.0% | |
| CATCGTCAAAACATAACCAG+TGG | - | chr3.1:70120684-70120703 | None:intergenic | 40.0% | |
| CCAAAGAGTGGTTTAGCTAA+TGG | + | chr3.1:70119509-70119528 | MS.gene73740:CDS | 40.0% | |
| CCAAAGTAATGTTCTCCTTC+AGG | - | chr3.1:70116578-70116597 | None:intergenic | 40.0% | |
| CCATTAGCTAAACCACTCTT+TGG | - | chr3.1:70119512-70119531 | None:intergenic | 40.0% | |
| CCTGAAGGAGAACATTACTT+TGG | + | chr3.1:70116575-70116594 | MS.gene73740:CDS | 40.0% | |
| CCTGCAAATCCATTCTACAA+GGG | - | chr3.1:70118161-70118180 | None:intergenic | 40.0% | |
| CTTCAGTGCAGACATTCTTT+GGG | + | chr3.1:70120728-70120747 | MS.gene73740:CDS | 40.0% | |
| GGCTACGTTGTTTGTGAATA+TGG | + | chr3.1:70117637-70117656 | MS.gene73740:intron | 40.0% | |
| GTCTAGAGAACTGGATCTAA+AGG | - | chr3.1:70117867-70117886 | None:intergenic | 40.0% | |
| TACTTTGGCCTCGAGAATTT+CGG | + | chr3.1:70116590-70116609 | MS.gene73740:CDS | 40.0% | |
| TATCACTCAACCTGAGTTCA+AGG | - | chr3.1:70120558-70120577 | None:intergenic | 40.0% | |
| TGATGAGCAAAGATGCCAAA+TGG | + | chr3.1:70120119-70120138 | MS.gene73740:intron | 40.0% | |
| TTCTACACATGTTCCAGTTC+AGG | - | chr3.1:70119054-70119073 | None:intergenic | 40.0% | |
| TTGCAGTAGTTGTCCATGTT+GGG | + | chr3.1:70120611-70120630 | MS.gene73740:CDS | 40.0% | |
| TTGGGTGCACAAAAACTTTC+AGG | + | chr3.1:70119556-70119575 | MS.gene73740:CDS | 40.0% | |
| TTTGCAGTAGTTGTCCATGT+TGG | + | chr3.1:70120610-70120629 | MS.gene73740:CDS | 40.0% | |
| ! | AAGTATTGCCGAAATTCTCG+AGG | - | chr3.1:70116601-70116620 | None:intergenic | 40.0% |
| ! | CTCAACCGAAAAGCACAAAA+AGG | - | chr3.1:70118320-70118339 | None:intergenic | 40.0% |
| ! | CTTTTTGTGCTTTTCGGTTG+AGG | + | chr3.1:70118318-70118337 | MS.gene73740:intron | 40.0% |
| ! | GAACTTGATGGTTAGGATGA+TGG | + | chr3.1:70118949-70118968 | MS.gene73740:intron | 40.0% |
| ! | GACATGACTGGTTACTTGTT+GGG | + | chr3.1:70118062-70118081 | MS.gene73740:intron | 40.0% |
| ! | GGCGTTTTACACTATCAATG+TGG | - | chr3.1:70117928-70117947 | None:intergenic | 40.0% |
| ! | TTATTGCAACAGCGTTTTGC+AGG | + | chr3.1:70116622-70116641 | MS.gene73740:CDS | 40.0% |
| ! | TTGTAGAATGGATTTGCAGG+CGG | + | chr3.1:70118161-70118180 | MS.gene73740:intron | 40.0% |
| ! | TTTTGACGATGAAACTGTCG+AGG | + | chr3.1:70120693-70120712 | MS.gene73740:CDS | 40.0% |
| !! | TTCTGGTTCTAAACTCGAGA+AGG | + | chr3.1:70116535-70116554 | MS.gene73740:CDS | 40.0% |
| !!! | CTTGATCGTCTTTTTCAGCA+CGG | - | chr3.1:70119454-70119473 | None:intergenic | 40.0% |
| !!! | TTGATCGTCTTTTTCAGCAC+GGG | - | chr3.1:70119453-70119472 | None:intergenic | 40.0% |
| AGATGAATGACCAAGACACG+TGG | - | chr3.1:70120469-70120488 | None:intergenic | 45.0% | |
| AGCTGAGAAGCAACTAAGCA+GGG | - | chr3.1:70118790-70118809 | None:intergenic | 45.0% | |
| AGGCCCTACAAAGAATTTGG+TGG | - | chr3.1:70116896-70116915 | None:intergenic | 45.0% | |
| ATGAATGACCAAGACACGTG+GGG | - | chr3.1:70120467-70120486 | None:intergenic | 45.0% | |
| ATGGAGATGGTCTAGAGAAC+TGG | - | chr3.1:70117876-70117895 | None:intergenic | 45.0% | |
| ATTGCGAATGGACCAAAGAG+TGG | + | chr3.1:70119497-70119516 | MS.gene73740:CDS | 45.0% | |
| CAAGATTCATGCTCATCACG+TGG | - | chr3.1:70120258-70120277 | None:intergenic | 45.0% | |
| CAGACATAATGTCCGTGGTT+GGG | - | chr3.1:70120643-70120662 | None:intergenic | 45.0% | |
| CCATTCGCAATCTTCTCAGA+AGG | - | chr3.1:70119488-70119507 | None:intergenic | 45.0% | |
| CCTCATATGCAAGCAATGTC+AGG | - | chr3.1:70117560-70117579 | None:intergenic | 45.0% | |
| CCTGACATTGCTTGCATATG+AGG | + | chr3.1:70117557-70117576 | MS.gene73740:intron | 45.0% | |
| CGTGCTGAAAAAGACGATCA+AGG | + | chr3.1:70119452-70119471 | MS.gene73740:CDS | 45.0% | |
| CTCCCAAACGATTTGTACAG+AGG | + | chr3.1:70118565-70118584 | MS.gene73740:CDS | 45.0% | |
| GAGAGGCCCTACAAAGAATT+TGG | - | chr3.1:70116899-70116918 | None:intergenic | 45.0% | |
| GAGGCCTCTTCGTATTTGAT+TGG | + | chr3.1:70117576-70117595 | MS.gene73740:intron | 45.0% | |
| GATAGTGTAAAACGCCACAC+TGG | + | chr3.1:70117932-70117951 | MS.gene73740:intron | 45.0% | |
| GATGAATGACCAAGACACGT+GGG | - | chr3.1:70120468-70120487 | None:intergenic | 45.0% | |
| GCCTGCAAATCCATTCTACA+AGG | - | chr3.1:70118162-70118181 | None:intergenic | 45.0% | |
| GCTTCAGTGCAGACATTCTT+TGG | + | chr3.1:70120727-70120746 | MS.gene73740:CDS | 45.0% | |
| GTACCTGGTGCATATAGCTA+CGG | - | chr3.1:70118614-70118633 | None:intergenic | 45.0% | |
| GTTCAAGGGGAAAGACAACA+CGG | - | chr3.1:70120543-70120562 | None:intergenic | 45.0% | |
| GTTTGCAAGAAGCTCAGAAG+AGG | + | chr3.1:70120425-70120444 | MS.gene73740:intron | 45.0% | |
| TAAAACGCCACACTGGAACT+TGG | + | chr3.1:70117939-70117958 | MS.gene73740:intron | 45.0% | |
| TAGTTGTCCATGTTGGGAGT+GGG | + | chr3.1:70120617-70120636 | MS.gene73740:CDS | 45.0% | |
| TCACTCAACCTGAGTTCAAG+GGG | - | chr3.1:70120556-70120575 | None:intergenic | 45.0% | |
| TCTAAACTCGAGAAGGCTCT+CGG | + | chr3.1:70116542-70116561 | MS.gene73740:CDS | 45.0% | |
| TGAGTTACCTTCACAGGTGA+AGG | + | chr3.1:70119240-70119259 | MS.gene73740:intron | 45.0% | |
| TTGCAAGCACCTTGTCTCAT+TGG | - | chr3.1:70119853-70119872 | None:intergenic | 45.0% | |
| TTGTCTTTCCCCTTGAACTC+AGG | + | chr3.1:70120545-70120564 | MS.gene73740:CDS | 45.0% | |
| TTGTGCACCCAAGTAGCTAA+AGG | - | chr3.1:70119548-70119567 | None:intergenic | 45.0% | |
| ! | AGGATGATGGTTCACTAGCT+GGG | + | chr3.1:70118962-70118981 | MS.gene73740:intron | 45.0% |
| ! | CCCTTGTAGAATGGATTTGC+AGG | + | chr3.1:70118158-70118177 | MS.gene73740:intron | 45.0% |
| ! | CCTTCTGAGAAGATTGCGAA+TGG | + | chr3.1:70119485-70119504 | MS.gene73740:CDS | 45.0% |
| ! | GGACATGACTGGTTACTTGT+TGG | + | chr3.1:70118061-70118080 | MS.gene73740:intron | 45.0% |
| ! | GGGACCTAATTGATGGTAAG+TGG | + | chr3.1:70117041-70117060 | MS.gene73740:intron | 45.0% |
| ! | TAGGATGATGGTTCACTAGC+TGG | + | chr3.1:70118961-70118980 | MS.gene73740:intron | 45.0% |
| !! | TTTTCTGTGACAAGTGCTGC+AGG | + | chr3.1:70120000-70120019 | MS.gene73740:CDS | 45.0% |
| AGTTCCCAGAAGAGGAAGAC+AGG | + | chr3.1:70118534-70118553 | MS.gene73740:CDS | 50.0% | |
| ATGATGGTTCACTAGCTGGG+CGG | + | chr3.1:70118965-70118984 | MS.gene73740:intron | 50.0% | |
| CAAGGCAGACATAATGTCCG+TGG | - | chr3.1:70120648-70120667 | None:intergenic | 50.0% | |
| CACACCTGTCTTCCTCTTCT+GGG | - | chr3.1:70118541-70118560 | None:intergenic | 50.0% | |
| CAGCTGAGAAGCAACTAAGC+AGG | - | chr3.1:70118791-70118810 | None:intergenic | 50.0% | |
| CTCGGCGATAATTTCCCTGA+AGG | + | chr3.1:70116560-70116579 | MS.gene73740:CDS | 50.0% | |
| CTCGTCTGAGTTACCTTCAC+AGG | + | chr3.1:70119234-70119253 | MS.gene73740:intron | 50.0% | |
| CTGTGAAGGTAACTCAGACG+AGG | - | chr3.1:70119236-70119255 | None:intergenic | 50.0% | |
| CTTCCGTAGCTATATGCACC+AGG | + | chr3.1:70118608-70118627 | MS.gene73740:CDS | 50.0% | |
| CTTTGTAGGGCCTCTCAAAC+AGG | + | chr3.1:70116903-70116922 | MS.gene73740:intron | 50.0% | |
| GAAGGTAACTCAGACGAGGA+AGG | - | chr3.1:70119232-70119251 | None:intergenic | 50.0% | |
| GCAGACATAATGTCCGTGGT+TGG | - | chr3.1:70120644-70120663 | None:intergenic | 50.0% | |
| GGAATGACCTTCACCTGTGA+AGG | - | chr3.1:70119250-70119269 | None:intergenic | 50.0% | |
| GTAGTTGTCCATGTTGGGAG+TGG | + | chr3.1:70120616-70120635 | MS.gene73740:CDS | 50.0% | |
| GTGTTTGCCAAGTTCCAGTG+TGG | - | chr3.1:70117949-70117968 | None:intergenic | 50.0% | |
| TCACACCTGTCTTCCTCTTC+TGG | - | chr3.1:70118542-70118561 | None:intergenic | 50.0% | |
| TGAATGACCAAGACACGTGG+GGG | - | chr3.1:70120466-70120485 | None:intergenic | 50.0% | |
| TGACGATGAAACTGTCGAGG+TGG | + | chr3.1:70120696-70120715 | MS.gene73740:CDS | 50.0% | |
| ! | AATGGTGGGACCTGTTTGAG+AGG | - | chr3.1:70116916-70116935 | None:intergenic | 50.0% |
| ! | TAGAATGGATTTGCAGGCGG+TGG | + | chr3.1:70118164-70118183 | MS.gene73740:intron | 50.0% |
| AAAGAGACCCCCACGTGTCT+TGG | + | chr3.1:70120456-70120475 | MS.gene73740:CDS | 55.0% | |
| CTAGCTGGGCGGTCAATAGA+AGG | + | chr3.1:70118976-70118995 | MS.gene73740:intron | 55.0% | |
| GGTTGGGCCCACTCCCAACA+TGG | - | chr3.1:70120627-70120646 | None:intergenic | 65.0% | |
| GTTGGGAGTGGGCCCAACCA+CGG | + | chr3.1:70120628-70120647 | MS.gene73740:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 70116527 | 70120822 | 70116527 | ID=MS.gene73740 |
| chr3.1 | mRNA | 70116527 | 70120822 | 70116527 | ID=MS.gene73740.t1;Parent=MS.gene73740 |
| chr3.1 | exon | 70116527 | 70116643 | 70116527 | ID=MS.gene73740.t1.exon1;Parent=MS.gene73740.t1 |
| chr3.1 | CDS | 70116527 | 70116643 | 70116527 | ID=cds.MS.gene73740.t1;Parent=MS.gene73740.t1 |
| chr3.1 | exon | 70117414 | 70117530 | 70117414 | ID=MS.gene73740.t1.exon2;Parent=MS.gene73740.t1 |
| chr3.1 | CDS | 70117414 | 70117530 | 70117414 | ID=cds.MS.gene73740.t1;Parent=MS.gene73740.t1 |
| chr3.1 | exon | 70118531 | 70118629 | 70118531 | ID=MS.gene73740.t1.exon3;Parent=MS.gene73740.t1 |
| chr3.1 | CDS | 70118531 | 70118629 | 70118531 | ID=cds.MS.gene73740.t1;Parent=MS.gene73740.t1 |
| chr3.1 | exon | 70119389 | 70119577 | 70119389 | ID=MS.gene73740.t1.exon4;Parent=MS.gene73740.t1 |
| chr3.1 | CDS | 70119389 | 70119577 | 70119389 | ID=cds.MS.gene73740.t1;Parent=MS.gene73740.t1 |
| chr3.1 | exon | 70119840 | 70120021 | 70119840 | ID=MS.gene73740.t1.exon5;Parent=MS.gene73740.t1 |
| chr3.1 | CDS | 70119840 | 70120021 | 70119840 | ID=cds.MS.gene73740.t1;Parent=MS.gene73740.t1 |
| chr3.1 | exon | 70120426 | 70120822 | 70120426 | ID=MS.gene73740.t1.exon6;Parent=MS.gene73740.t1 |
| chr3.1 | CDS | 70120426 | 70120822 | 70120426 | ID=cds.MS.gene73740.t1;Parent=MS.gene73740.t1 |
| Gene Sequence |
| Protein sequence |
