Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052197.t1 | XP_003601945.1 | 98.4 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 2.30E-208 | 734.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052197.t1 | Q8LAM0 | 82.4 | 364 | 61 | 2 | 1 | 363 | 1 | 362 | 1.6e-173 | 610.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052197.t1 | G7J3R1 | 98.4 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 1.7e-208 | 734.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050654 | MS.gene052197 | 0.801768 | 7.71E-49 | -1.69E-46 |
| MS.gene052197 | MS.gene065460 | 0.806283 | 8.87E-50 | -1.69E-46 |
| MS.gene052197 | MS.gene070713 | -0.80379 | 2.95E-49 | -1.69E-46 |
| MS.gene052197 | MS.gene20985 | 0.811585 | 6.50E-51 | -1.69E-46 |
| MS.gene052197 | MS.gene22705 | 0.807642 | 4.58E-50 | -1.69E-46 |
| MS.gene052197 | MS.gene51985 | 0.800387 | 1.48E-48 | -1.69E-46 |
| MS.gene052197 | MS.gene53612 | 0.805256 | 1.46E-49 | -1.69E-46 |
| MS.gene052197 | MS.gene60150 | 0.804774 | 1.84E-49 | -1.69E-46 |
| MS.gene052197 | MS.gene73740 | 0.921304 | 4.25E-88 | -1.69E-46 |
| MS.gene052197 | MS.gene75481 | 0.871755 | 5.37E-67 | -1.69E-46 |
| MS.gene052197 | MS.gene79120 | 0.82323 | 1.55E-53 | -1.69E-46 |
| MS.gene052197 | MS.gene79209 | 0.888504 | 5.57E-73 | -1.69E-46 |
| MS.gene052197 | MS.gene83674 | 0.801491 | 8.78E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052197.t1 | MTR_3g087140 | 98.361 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 0.0 | 752 |
| MS.gene052197.t1 | MTR_8g090190 | 86.501 | 363 | 49 | 0 | 1 | 363 | 1 | 363 | 0.0 | 662 |
| MS.gene052197.t1 | MTR_3g100480 | 30.347 | 346 | 190 | 10 | 23 | 360 | 584 | 886 | 3.54e-37 | 143 |
| MS.gene052197.t1 | MTR_6g022290 | 28.531 | 354 | 192 | 9 | 17 | 360 | 23 | 325 | 3.15e-35 | 135 |
| MS.gene052197.t1 | MTR_4g130940 | 30.205 | 341 | 194 | 10 | 24 | 360 | 93 | 393 | 5.71e-35 | 136 |
| MS.gene052197.t1 | MTR_3g100480 | 28.226 | 372 | 194 | 10 | 23 | 360 | 584 | 916 | 6.45e-35 | 136 |
| MS.gene052197.t1 | MTR_4g130940 | 30.205 | 341 | 194 | 10 | 24 | 360 | 93 | 393 | 6.65e-35 | 136 |
| MS.gene052197.t1 | MTR_6g022310 | 28.933 | 356 | 188 | 10 | 17 | 360 | 121 | 423 | 7.18e-35 | 135 |
| MS.gene052197.t1 | MTR_5g030360 | 29.855 | 345 | 182 | 10 | 24 | 360 | 155 | 447 | 7.55e-35 | 135 |
| MS.gene052197.t1 | MTR_5g066000 | 31.481 | 324 | 186 | 10 | 23 | 340 | 542 | 835 | 1.41e-34 | 135 |
| MS.gene052197.t1 | MTR_6g022300 | 27.666 | 347 | 190 | 9 | 24 | 360 | 68 | 363 | 1.68e-31 | 125 |
| MS.gene052197.t1 | MTR_1g014680 | 29.781 | 319 | 186 | 8 | 24 | 334 | 182 | 470 | 2.89e-31 | 125 |
| MS.gene052197.t1 | MTR_4g115880 | 26.450 | 431 | 189 | 14 | 15 | 360 | 191 | 578 | 1.60e-30 | 122 |
| MS.gene052197.t1 | MTR_1g014260 | 29.539 | 369 | 186 | 14 | 16 | 340 | 176 | 514 | 2.01e-30 | 122 |
| MS.gene052197.t1 | MTR_5g032380 | 29.102 | 323 | 190 | 8 | 23 | 338 | 424 | 714 | 3.68e-30 | 122 |
| MS.gene052197.t1 | MTR_2g070390 | 27.746 | 346 | 211 | 8 | 23 | 365 | 22 | 331 | 4.81e-29 | 119 |
| MS.gene052197.t1 | MTR_2g071620 | 30.172 | 348 | 187 | 12 | 24 | 360 | 465 | 767 | 2.30e-28 | 117 |
| MS.gene052197.t1 | MTR_1g010040 | 30.696 | 316 | 169 | 9 | 24 | 330 | 108 | 382 | 3.89e-28 | 116 |
| MS.gene052197.t1 | MTR_1g010040 | 30.696 | 316 | 169 | 9 | 24 | 330 | 108 | 382 | 4.17e-28 | 116 |
| MS.gene052197.t1 | MTR_5g430360 | 29.655 | 290 | 150 | 8 | 78 | 360 | 37 | 279 | 8.59e-28 | 114 |
| MS.gene052197.t1 | MTR_8g471100 | 26.744 | 344 | 193 | 9 | 24 | 360 | 213 | 504 | 9.19e-26 | 108 |
| MS.gene052197.t1 | MTR_8g067060 | 26.744 | 344 | 193 | 9 | 24 | 360 | 204 | 495 | 1.19e-25 | 108 |
| MS.gene052197.t1 | MTR_3g108660 | 30.794 | 315 | 170 | 11 | 24 | 330 | 108 | 382 | 2.60e-25 | 108 |
| MS.gene052197.t1 | MTR_3g108660 | 30.794 | 315 | 170 | 11 | 24 | 330 | 108 | 382 | 2.67e-25 | 108 |
| MS.gene052197.t1 | MTR_2g060050 | 27.100 | 369 | 221 | 13 | 24 | 363 | 183 | 532 | 8.43e-22 | 97.1 |
| MS.gene052197.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 201 | 477 | 3.60e-21 | 95.9 |
| MS.gene052197.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 202 | 478 | 3.98e-21 | 95.5 |
| MS.gene052197.t1 | MTR_1g041240 | 26.415 | 318 | 182 | 8 | 24 | 330 | 200 | 476 | 4.05e-21 | 95.5 |
| MS.gene052197.t1 | MTR_8g064910 | 25.072 | 347 | 201 | 13 | 24 | 360 | 55 | 352 | 2.97e-19 | 89.0 |
| MS.gene052197.t1 | MTR_4g111860 | 25.496 | 353 | 195 | 11 | 24 | 360 | 88 | 388 | 7.74e-19 | 87.8 |
| MS.gene052197.t1 | MTR_7g088760 | 33.129 | 163 | 87 | 5 | 208 | 363 | 754 | 901 | 3.27e-16 | 80.9 |
| MS.gene052197.t1 | MTR_7g088760 | 33.129 | 163 | 87 | 5 | 208 | 363 | 771 | 918 | 3.30e-16 | 80.9 |
| MS.gene052197.t1 | MTR_2g087710 | 27.234 | 235 | 141 | 8 | 137 | 364 | 652 | 863 | 1.22e-14 | 75.9 |
| MS.gene052197.t1 | MTR_7g106570 | 29.778 | 225 | 127 | 10 | 153 | 363 | 681 | 888 | 4.60e-14 | 73.9 |
| MS.gene052197.t1 | MTR_1g077980 | 29.091 | 165 | 96 | 5 | 208 | 366 | 765 | 914 | 4.47e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052197.t1 | AT2G22310 | 82.418 | 364 | 61 | 2 | 1 | 363 | 1 | 362 | 0.0 | 629 |
| MS.gene052197.t1 | AT4G39910 | 81.471 | 367 | 64 | 3 | 1 | 363 | 1 | 367 | 0.0 | 624 |
| MS.gene052197.t1 | AT2G22310 | 81.763 | 329 | 57 | 2 | 36 | 363 | 4 | 330 | 0.0 | 561 |
| MS.gene052197.t1 | AT2G22310 | 81.846 | 325 | 56 | 2 | 40 | 363 | 3 | 325 | 0.0 | 555 |
| MS.gene052197.t1 | AT4G24560 | 28.280 | 343 | 199 | 10 | 24 | 360 | 543 | 844 | 4.17e-36 | 140 |
| MS.gene052197.t1 | AT5G57990 | 29.070 | 344 | 193 | 13 | 24 | 360 | 108 | 407 | 7.49e-34 | 133 |
| MS.gene052197.t1 | AT3G14400 | 28.530 | 347 | 211 | 7 | 23 | 365 | 24 | 337 | 2.43e-32 | 128 |
| MS.gene052197.t1 | AT5G65450 | 30.063 | 316 | 181 | 10 | 23 | 330 | 348 | 631 | 1.99e-31 | 125 |
| MS.gene052197.t1 | AT5G65450 | 29.747 | 316 | 182 | 9 | 23 | 330 | 329 | 612 | 2.50e-31 | 125 |
| MS.gene052197.t1 | AT4G31670 | 28.213 | 319 | 191 | 10 | 24 | 334 | 169 | 457 | 1.15e-30 | 123 |
| MS.gene052197.t1 | AT2G24640 | 27.900 | 319 | 192 | 9 | 24 | 334 | 5 | 293 | 2.99e-28 | 115 |
| MS.gene052197.t1 | AT2G24640 | 27.900 | 319 | 192 | 9 | 24 | 334 | 175 | 463 | 3.55e-28 | 116 |
| MS.gene052197.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 439 | 741 | 6.89e-27 | 112 |
| MS.gene052197.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 439 | 741 | 6.89e-27 | 112 |
| MS.gene052197.t1 | AT1G17110 | 28.161 | 348 | 194 | 12 | 24 | 360 | 443 | 745 | 7.30e-27 | 112 |
| MS.gene052197.t1 | AT4G17895 | 29.014 | 355 | 176 | 12 | 24 | 360 | 177 | 473 | 4.22e-25 | 107 |
| MS.gene052197.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 3.10e-24 | 105 |
| MS.gene052197.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 3.10e-24 | 105 |
| MS.gene052197.t1 | AT3G49600 | 28.707 | 317 | 173 | 10 | 24 | 330 | 107 | 380 | 4.06e-24 | 104 |
| MS.gene052197.t1 | AT5G46740 | 28.696 | 345 | 196 | 10 | 24 | 360 | 164 | 466 | 1.83e-22 | 99.4 |
| MS.gene052197.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 197 | 498 | 1.21e-20 | 94.4 |
| MS.gene052197.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 197 | 498 | 1.21e-20 | 94.4 |
| MS.gene052197.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 196 | 497 | 1.26e-20 | 94.4 |
| MS.gene052197.t1 | AT3G11910 | 26.822 | 343 | 197 | 10 | 22 | 351 | 196 | 497 | 1.26e-20 | 94.4 |
| MS.gene052197.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 198 | 521 | 1.61e-20 | 94.0 |
| MS.gene052197.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 197 | 520 | 1.94e-20 | 93.6 |
| MS.gene052197.t1 | AT5G06600 | 26.027 | 365 | 203 | 12 | 22 | 360 | 198 | 521 | 2.12e-20 | 93.6 |
| MS.gene052197.t1 | AT5G10790 | 24.737 | 380 | 200 | 11 | 15 | 339 | 42 | 390 | 1.11e-18 | 87.4 |
| MS.gene052197.t1 | AT5G10790 | 24.474 | 380 | 201 | 11 | 15 | 339 | 171 | 519 | 2.89e-18 | 86.7 |
| MS.gene052197.t1 | AT5G46740 | 28.405 | 257 | 139 | 7 | 110 | 360 | 40 | 257 | 2.70e-16 | 80.5 |
| MS.gene052197.t1 | AT5G22030 | 30.723 | 166 | 94 | 6 | 204 | 363 | 761 | 911 | 9.60e-14 | 73.2 |
| MS.gene052197.t1 | AT5G22030 | 30.723 | 166 | 94 | 6 | 204 | 363 | 719 | 869 | 1.02e-13 | 73.2 |
| MS.gene052197.t1 | AT2G40930 | 31.250 | 160 | 88 | 6 | 208 | 360 | 769 | 913 | 1.21e-13 | 72.8 |
| MS.gene052197.t1 | AT2G40930 | 31.250 | 160 | 88 | 6 | 208 | 360 | 769 | 913 | 1.21e-13 | 72.8 |
| MS.gene052197.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene052197.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene052197.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene052197.t1 | AT4G10590 | 31.325 | 166 | 93 | 6 | 204 | 363 | 744 | 894 | 7.98e-12 | 67.4 |
| MS.gene052197.t1 | AT4G10570 | 31.325 | 166 | 93 | 6 | 204 | 363 | 745 | 895 | 1.07e-11 | 67.0 |
| MS.gene052197.t1 | AT1G32850 | 29.651 | 172 | 96 | 7 | 203 | 366 | 729 | 883 | 2.44e-11 | 65.9 |
Find 63 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCAGTGCAGACATTCTT+TGG | 0.226632 | 3.2:+74411928 | MS.gene052197:CDS |
| TCACACCTGTCTTCCTCTTC+TGG | 0.239068 | 3.2:-74409819 | None:intergenic |
| GAACAATTGCTACAATATTA+TGG | 0.282416 | 3.2:+74408724 | MS.gene052197:CDS |
| AAATGAACTTGTTGACATTC+TGG | 0.297380 | 3.2:+74410683 | MS.gene052197:CDS |
| CAACCTCTGTACAAATCGTT+TGG | 0.322213 | 3.2:-74409848 | None:intergenic |
| CCAAAGTAATGTTCTCCTTC+AGG | 0.328815 | 3.2:-74407845 | None:intergenic |
| TACTTTGGCCTCGAGAATTT+CGG | 0.330275 | 3.2:+74407860 | MS.gene052197:CDS |
| CAAAACATAACCAGTGGTTA+TGG | 0.364423 | 3.2:-74411876 | None:intergenic |
| TTGCAAGCACCTTGTCTCAT+TGG | 0.376816 | 3.2:-74411051 | None:intergenic |
| TTGCAGTAGTTGTCCATGTT+GGG | 0.380146 | 3.2:+74411812 | MS.gene052197:CDS |
| CCATTAGCTAAACCACTCTT+TGG | 0.383199 | 3.2:-74410774 | None:intergenic |
| CTTCAGTGCAGACATTCTTT+GGG | 0.391927 | 3.2:+74411929 | MS.gene052197:CDS |
| TGTAGCAATTGTTCTCGAAA+TGG | 0.394146 | 3.2:-74408715 | None:intergenic |
| AACCTCTGTACAAATCGTTT+GGG | 0.398526 | 3.2:-74409847 | None:intergenic |
| AACGCGCTCATGGGTGGTTC+TGG | 0.403585 | 3.2:+74407788 | None:intergenic |
| TTGTCTTTCCCCTTGAACTC+AGG | 0.435602 | 3.2:+74411746 | MS.gene052197:CDS |
| CACACCTGTCTTCCTCTTCT+GGG | 0.437291 | 3.2:-74409818 | None:intergenic |
| TATCACTCAACCTGAGTTCA+AGG | 0.443968 | 3.2:-74411756 | None:intergenic |
| CCTGAAGGAGAACATTACTT+TGG | 0.451777 | 3.2:+74407845 | MS.gene052197:CDS |
| CCAAAGAGTGGTTTAGCTAA+TGG | 0.456689 | 3.2:+74410774 | MS.gene052197:CDS |
| CAAAGTAATGTTCTCCTTCA+GGG | 0.463000 | 3.2:-74407844 | None:intergenic |
| AAAAGAGCCTTTAGCTACTT+GGG | 0.466028 | 3.2:+74410803 | MS.gene052197:CDS |
| TTGTGCACCCAAGTAGCTAA+AGG | 0.471803 | 3.2:-74410810 | None:intergenic |
| TTTGCAGTAGTTGTCCATGT+TGG | 0.472175 | 3.2:+74411811 | MS.gene052197:CDS |
| ACAAATAGTTCAAGAACTCA+TGG | 0.473994 | 3.2:-74410659 | None:intergenic |
| CAGACATAATGTCCGTGGTT+GGG | 0.501159 | 3.2:-74411841 | None:intergenic |
| TAGTTGTCCATGTTGGGAGT+GGG | 0.524445 | 3.2:+74411818 | MS.gene052197:CDS |
| TCTAAACTCGAGAAGGCTCT+CGG | 0.528934 | 3.2:+74407812 | MS.gene052197:CDS |
| AGTTCCCAGAAGAGGAAGAC+AGG | 0.531654 | 3.2:+74409814 | MS.gene052197:CDS |
| GTAGTTGTCCATGTTGGGAG+TGG | 0.545060 | 3.2:+74411817 | MS.gene052197:CDS |
| GGTTGGGCCCACTCCCAACA+TGG | 0.549398 | 3.2:-74411825 | None:intergenic |
| GTTTGCAAGAAGCTCAGAAG+AGG | 0.550711 | 3.2:+74411626 | MS.gene052197:intron |
| ATCACTCAACCTGAGTTCAA+GGG | 0.571357 | 3.2:-74411755 | None:intergenic |
| GCAGACATAATGTCCGTGGT+TGG | 0.577071 | 3.2:-74411842 | None:intergenic |
| CTCCCAAACGATTTGTACAG+AGG | 0.577523 | 3.2:+74409845 | MS.gene052197:CDS |
| TATAGATAAGTTCCCAGAAG+AGG | 0.577641 | 3.2:+74409806 | MS.gene052197:intron |
| CTTCCGTAGCTATATGCACC+AGG | 0.590612 | 3.2:+74409888 | MS.gene052197:CDS |
| TTCTGGTTCTAAACTCGAGA+AGG | 0.590698 | 3.2:+74407805 | MS.gene052197:CDS |
| CAAATAGTTCAAGAACTCAT+GGG | 0.594052 | 3.2:-74410658 | None:intergenic |
| GTTGGGAGTGGGCCCAACCA+CGG | 0.596385 | 3.2:+74411829 | MS.gene052197:CDS |
| AATGTGAAACTGTTACCGCT+AGG | 0.596426 | 3.2:+74411072 | MS.gene052197:CDS |
| CCATTCGCAATCTTCTCAGA+AGG | 0.599118 | 3.2:-74410750 | None:intergenic |
| TTTAAGTACATGGAACAGCT+GGG | 0.603531 | 3.2:+74411697 | MS.gene052197:CDS |
| CAATTCAACGCGCTCATGGG+TGG | 0.604923 | 3.2:+74407782 | None:intergenic |
| GTACCTGGTGCATATAGCTA+CGG | 0.605797 | 3.2:-74409891 | None:intergenic |
| ATTGCGAATGGACCAAAGAG+TGG | 0.607250 | 3.2:+74410762 | MS.gene052197:CDS |
| CGTAAAACAAAATGTAACCA+TGG | 0.617281 | 3.2:-74411981 | None:intergenic |
| CTCGGCGATAATTTCCCTGA+AGG | 0.623448 | 3.2:+74407830 | MS.gene052197:CDS |
| TCACTCAACCTGAGTTCAAG+GGG | 0.625682 | 3.2:-74411754 | None:intergenic |
| TTCAACAATAATACAGACCA+TGG | 0.626392 | 3.2:+74411964 | MS.gene052197:CDS |
| CCTTCTGAGAAGATTGCGAA+TGG | 0.627827 | 3.2:+74410750 | MS.gene052197:CDS |
| CGTCGTCAAAACATAACCAG+TGG | 0.628688 | 3.2:-74411882 | None:intergenic |
| ATGTGAAACTGTTACCGCTA+GGG | 0.633533 | 3.2:+74411073 | MS.gene052197:CDS |
| CAAGGCAGACATAATGTCCG+TGG | 0.637860 | 3.2:-74411846 | None:intergenic |
| AGATGAATGACCAAGACACG+TGG | 0.653059 | 3.2:-74411667 | None:intergenic |
| GATGAATGACCAAGACACGT+GGG | 0.658347 | 3.2:-74411666 | None:intergenic |
| ATGAATGACCAAGACACGTG+GGG | 0.659217 | 3.2:-74411665 | None:intergenic |
| TGACGACGAAACTGTCGAGG+TGG | 0.668810 | 3.2:+74411897 | MS.gene052197:CDS |
| AAGTATTGCCGAAATTCTCG+AGG | 0.684941 | 3.2:-74407868 | None:intergenic |
| TGAATGACCAAGACACGTGG+GGG | 0.688525 | 3.2:-74411664 | None:intergenic |
| GGTAAGACAGCTTCTTGTAG+CGG | 0.692354 | 3.2:-74411720 | None:intergenic |
| GTTCAAGGGGAAAGACAACA+CGG | 0.707575 | 3.2:-74411741 | None:intergenic |
| GAATACTTACCAATGAGACA+AGG | 0.751910 | 3.2:+74411042 | MS.gene052197:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATTTATTATATGTATTT+GGG | + | chr3.2:74408463-74408482 | MS.gene052197:intron | 10.0% |
| !! | TACTATTTATTATATGTATT+TGG | + | chr3.2:74408462-74408481 | MS.gene052197:intron | 10.0% |
| !! | TTAAAAAAAAGTAGTAAAAT+AGG | - | chr3.2:74411260-74411279 | None:intergenic | 10.0% |
| !!! | AGATTTTTAAATTTTCATTT+CGG | + | chr3.2:74410988-74411007 | MS.gene052197:intron | 10.0% |
| !!! | ATTTTACTACTTTTTTTTAA+AGG | + | chr3.2:74411260-74411279 | MS.gene052197:intron | 10.0% |
| !!! | TTTTACTACTTTTTTTTAAA+GGG | + | chr3.2:74411261-74411280 | MS.gene052197:intron | 10.0% |
| !! | AGATATTATTAAAAAAGAGA+CGG | + | chr3.2:74409033-74409052 | MS.gene052197:intron | 15.0% |
| !! | ATAGTAAGTTGTTAAAATAT+GGG | + | chr3.2:74408304-74408323 | MS.gene052197:intron | 15.0% |
| !! | TAAATCAGAATAATAAACAA+TGG | - | chr3.2:74409183-74409202 | None:intergenic | 15.0% |
| !! | TTATGATTATAGAATTTATC+TGG | + | chr3.2:74408894-74408913 | MS.gene052197:intron | 15.0% |
| !!! | GTTATTTTATTTTTGTTAGA+AGG | + | chr3.2:74410384-74410403 | MS.gene052197:intron | 15.0% |
| !!! | TCTCTTTTTTAATAATATCT+GGG | - | chr3.2:74409033-74409052 | None:intergenic | 15.0% |
| !!! | TTTACTCTAAAATAAACTTA+AGG | - | chr3.2:74408156-74408175 | None:intergenic | 15.0% |
| !!! | TTTTTATTACTTTTAGTAAG+AGG | + | chr3.2:74411284-74411303 | MS.gene052197:intron | 15.0% |
| !! | AAATACAATAGCTAACAAAA+AGG | - | chr3.2:74409405-74409424 | None:intergenic | 20.0% |
| !! | ATCTATATCAAGAAATAACA+TGG | - | chr3.2:74409793-74409812 | None:intergenic | 20.0% |
| !! | ATGAAATGAATGTTTCAAAA+AGG | + | chr3.2:74408219-74408238 | MS.gene052197:intron | 20.0% |
| !! | ATTAACAACTTCACAATTTA+TGG | - | chr3.2:74410906-74410925 | None:intergenic | 20.0% |
| !! | GAGATTATGAATATATCAAA+AGG | - | chr3.2:74408392-74408411 | None:intergenic | 20.0% |
| !! | GATAGTAAGTTGTTAAAATA+TGG | + | chr3.2:74408303-74408322 | MS.gene052197:intron | 20.0% |
| !! | TGGTTAAAAAGTTACTAATT+TGG | - | chr3.2:74408987-74409006 | None:intergenic | 20.0% |
| !! | TTAAAAAGTTACTAATTTGG+TGG | - | chr3.2:74408984-74409003 | None:intergenic | 20.0% |
| !! | TTGAAACATTCATTTCATAA+TGG | - | chr3.2:74408217-74408236 | None:intergenic | 20.0% |
| !! | TTGATATATTCATAATCTCA+AGG | + | chr3.2:74408393-74408412 | MS.gene052197:intron | 20.0% |
| !!! | ATTATTGTTTTGCTGAATTT+CGG | + | chr3.2:74408074-74408093 | MS.gene052197:intron | 20.0% |
| !!! | CTAATTTTTAGTCTTACTAT+TGG | + | chr3.2:74408532-74408551 | MS.gene052197:intron | 20.0% |
| !!! | CTCTTTTTTAATAATATCTG+GGG | - | chr3.2:74409032-74409051 | None:intergenic | 20.0% |
| !!! | GTAATTATTTTCTGAATAAC+AGG | - | chr3.2:74407962-74407981 | None:intergenic | 20.0% |
| !!! | GTCTCTTTTTTAATAATATC+TGG | - | chr3.2:74409034-74409053 | None:intergenic | 20.0% |
| !!! | TAAAAATATTTTCTGCTCAA+GGG | - | chr3.2:74410279-74410298 | None:intergenic | 20.0% |
| !!! | TCTTATTTTTGTGATCATTA+TGG | - | chr3.2:74410971-74410990 | None:intergenic | 20.0% |
| !!! | TTAAAAATATTTTCTGCTCA+AGG | - | chr3.2:74410280-74410299 | None:intergenic | 20.0% |
| !!! | TTAATCTTCTCATATTTTGT+AGG | + | chr3.2:74410632-74410651 | MS.gene052197:intron | 20.0% |
| !!! | TTTTTGTTAGCTATTGTATT+TGG | + | chr3.2:74409404-74409423 | MS.gene052197:intron | 20.0% |
| ! | AAACATTCATTTCATAATGG+TGG | - | chr3.2:74408214-74408233 | None:intergenic | 25.0% |
| ! | AAACCACAAATTTAGTTACA+AGG | - | chr3.2:74408659-74408678 | None:intergenic | 25.0% |
| ! | AAACTACACATTTGAAAAAC+AGG | - | chr3.2:74410536-74410555 | None:intergenic | 25.0% |
| ! | AAATATACTTGAGTACACAT+TGG | + | chr3.2:74409495-74409514 | MS.gene052197:intron | 25.0% |
| ! | AACATTCATTTCATAATGGT+GGG | - | chr3.2:74408213-74408232 | None:intergenic | 25.0% |
| ! | AATTAAATCTAGTATGCAGT+GGG | + | chr3.2:74410931-74410950 | MS.gene052197:intron | 25.0% |
| ! | ACATGTTTATTGATGTTACA+TGG | + | chr3.2:74408943-74408962 | MS.gene052197:intron | 25.0% |
| ! | AGGAACATAAATGTTAACTA+AGG | - | chr3.2:74409385-74409404 | None:intergenic | 25.0% |
| ! | ATACCTTGTAACTAAATTTG+TGG | + | chr3.2:74408653-74408672 | MS.gene052197:intron | 25.0% |
| ! | ATGAATATATCAAAAGGTTC+TGG | - | chr3.2:74408386-74408405 | None:intergenic | 25.0% |
| ! | ATTATATTCATAACCCTTTC+AGG | - | chr3.2:74411525-74411544 | None:intergenic | 25.0% |
| ! | GAACAATTGCTACAATATTA+TGG | + | chr3.2:74408724-74408743 | MS.gene052197:CDS | 25.0% |
| ! | GATAAACTTAACCAATAGTA+GGG | - | chr3.2:74409323-74409342 | None:intergenic | 25.0% |
| ! | TAGATAATATTGAAGCCATT+TGG | - | chr3.2:74411338-74411357 | None:intergenic | 25.0% |
| ! | TCAAAAGAAAGATTGCATTT+CGG | - | chr3.2:74411601-74411620 | None:intergenic | 25.0% |
| ! | TGATAAACTTAACCAATAGT+AGG | - | chr3.2:74409324-74409343 | None:intergenic | 25.0% |
| ! | TTAGTCAATCAAATACGAAA+AGG | - | chr3.2:74408866-74408885 | None:intergenic | 25.0% |
| ! | TTCGTCAAACAATGAATATT+AGG | + | chr3.2:74408100-74408119 | MS.gene052197:intron | 25.0% |
| !! | AAAATTAGTTGGTCTAAGTA+TGG | - | chr3.2:74409007-74409026 | None:intergenic | 25.0% |
| !! | AAATGATGCCATTCTAATTT+TGG | - | chr3.2:74409100-74409119 | None:intergenic | 25.0% |
| !! | AATATTAGGATGAGTTTGTT+TGG | + | chr3.2:74408114-74408133 | MS.gene052197:intron | 25.0% |
| !! | ACTAGTAATATGATGTTTTC+TGG | + | chr3.2:74411419-74411438 | MS.gene052197:intron | 25.0% |
| !! | ATGTATGTACTTTGTTTATG+AGG | + | chr3.2:74408488-74408507 | MS.gene052197:intron | 25.0% |
| !! | CTAGTAATATGATGTTTTCT+GGG | + | chr3.2:74411420-74411439 | MS.gene052197:intron | 25.0% |
| !! | TAACTAAGGAAACAGATTTT+AGG | - | chr3.2:74409371-74409390 | None:intergenic | 25.0% |
| !! | TACTATTGGTTAAGTTTATC+AGG | + | chr3.2:74409323-74409342 | MS.gene052197:intron | 25.0% |
| !!! | GTTTTAAATTGCTTTGATCA+GGG | + | chr3.2:74411020-74411039 | MS.gene052197:intron | 25.0% |
| !!! | TGTCTTGTTTATTTCTTTCA+TGG | + | chr3.2:74409756-74409775 | MS.gene052197:intron | 25.0% |
| !!! | TGTTTTAAATTGCTTTGATC+AGG | + | chr3.2:74411019-74411038 | MS.gene052197:intron | 25.0% |
| !!! | TTTGTAGGTCACTTTTAAAT+AGG | - | chr3.2:74408420-74408439 | None:intergenic | 25.0% |
| !!! | TTTTAGTCTTACTATTGGAA+AGG | + | chr3.2:74408537-74408556 | MS.gene052197:intron | 25.0% |
| AAAAAACATTTCATCCCTAG+CGG | - | chr3.2:74411090-74411109 | None:intergenic | 30.0% | |
| AAAAGTGACCTACAAAATGA+GGG | + | chr3.2:74408424-74408443 | MS.gene052197:intron | 30.0% | |
| AAAATATGGGACCTAATTGA+TGG | + | chr3.2:74408317-74408336 | MS.gene052197:intron | 30.0% | |
| AAACCACCAAATTCTTTGTA+GGG | + | chr3.2:74408173-74408192 | MS.gene052197:intron | 30.0% | |
| AAATTCCCTTAGTAACAACT+TGG | - | chr3.2:74409296-74409315 | None:intergenic | 30.0% | |
| ACAAAATGAGGGACTAATAT+GGG | + | chr3.2:74408435-74408454 | MS.gene052197:intron | 30.0% | |
| ACAAATAGTTCAAGAACTCA+TGG | - | chr3.2:74410662-74410681 | None:intergenic | 30.0% | |
| ATCATTTGCAAATTGTAGCT+AGG | + | chr3.2:74409113-74409132 | MS.gene052197:intron | 30.0% | |
| ATTCTATGCATTACTCTTGA+AGG | - | chr3.2:74409983-74410002 | None:intergenic | 30.0% | |
| CAAATAGTTCAAGAACTCAT+GGG | - | chr3.2:74410661-74410680 | None:intergenic | 30.0% | |
| CAATGATCTACCAATTGAAA+TGG | - | chr3.2:74410127-74410146 | None:intergenic | 30.0% | |
| CAATTAAATCTAGTATGCAG+TGG | + | chr3.2:74410930-74410949 | MS.gene052197:intron | 30.0% | |
| CAGAATAATAAACAATGGCA+TGG | - | chr3.2:74409178-74409197 | None:intergenic | 30.0% | |
| CATTTCAATTGGTAGATCAT+TGG | + | chr3.2:74410125-74410144 | MS.gene052197:intron | 30.0% | |
| CGTAAAACAAAATGTAACCA+TGG | - | chr3.2:74411984-74412003 | None:intergenic | 30.0% | |
| GATTATAGAATTTATCTGGC+TGG | + | chr3.2:74408898-74408917 | MS.gene052197:intron | 30.0% | |
| GCATATTCAGAATATCTAGA+CGG | + | chr3.2:74408597-74408616 | MS.gene052197:intron | 30.0% | |
| TAAAAGTGACCTACAAAATG+AGG | + | chr3.2:74408423-74408442 | MS.gene052197:intron | 30.0% | |
| TAAACCACCAAATTCTTTGT+AGG | + | chr3.2:74408172-74408191 | MS.gene052197:intron | 30.0% | |
| TAAACCACTTACCATCAATT+AGG | - | chr3.2:74408331-74408350 | None:intergenic | 30.0% | |
| TACAAAATGAGGGACTAATA+TGG | + | chr3.2:74408434-74408453 | MS.gene052197:intron | 30.0% | |
| TAGCTTATAGTTGAACTTGA+TGG | + | chr3.2:74410202-74410221 | MS.gene052197:intron | 30.0% | |
| TAGGTTAACAATCCATTGAT+TGG | + | chr3.2:74411480-74411499 | MS.gene052197:intron | 30.0% | |
| TATTGATGTTACATGGATGA+AGG | + | chr3.2:74408950-74408969 | MS.gene052197:intron | 30.0% | |
| TGAATGTGTTATGGAAACAA+AGG | - | chr3.2:74410428-74410447 | None:intergenic | 30.0% | |
| TGAGAAAAATTGCCAATCAA+TGG | - | chr3.2:74411495-74411514 | None:intergenic | 30.0% | |
| TTCAACAATAATACAGACCA+TGG | + | chr3.2:74411964-74411983 | MS.gene052197:CDS | 30.0% | |
| TTCTACAAGGGAAACAAAAA+AGG | - | chr3.2:74409432-74409451 | None:intergenic | 30.0% | |
| TTGTAAAAAACCATAACCAC+TGG | + | chr3.2:74411866-74411885 | MS.gene052197:CDS | 30.0% | |
| ! | AAGTTACTAATTTGGTGGAT+TGG | - | chr3.2:74408979-74408998 | None:intergenic | 30.0% |
| ! | ATATTAGTCCCTCATTTTGT+AGG | - | chr3.2:74408435-74408454 | None:intergenic | 30.0% |
| ! | TATAGTTGAACTTGATGGTT+AGG | + | chr3.2:74410207-74410226 | MS.gene052197:intron | 30.0% |
| ! | TATCTGGGGTAAAAATTAGT+TGG | - | chr3.2:74409018-74409037 | None:intergenic | 30.0% |
| ! | TATGATGTTTTCTGGGTATA+TGG | + | chr3.2:74411427-74411446 | MS.gene052197:intron | 30.0% |
| ! | TTCTCATTGATTACCTGAAA+GGG | + | chr3.2:74411509-74411528 | MS.gene052197:intron | 30.0% |
| ! | TTTCTCATTGATTACCTGAA+AGG | + | chr3.2:74411508-74411527 | MS.gene052197:intron | 30.0% |
| !! | AAATGAACTTGTTGACATTC+TGG | + | chr3.2:74410683-74410702 | MS.gene052197:CDS | 30.0% |
| !! | CTAAAAACAGTTTTGCTATC+GGG | - | chr3.2:74410185-74410204 | None:intergenic | 30.0% |
| !! | GCTAAAAACAGTTTTGCTAT+CGG | - | chr3.2:74410186-74410205 | None:intergenic | 30.0% |
| !! | TCTTAAGCGTTTTAAGTACA+TGG | + | chr3.2:74411687-74411706 | MS.gene052197:CDS | 30.0% |
| !! | TTTTTGTTTCCCTTGTAGAA+TGG | + | chr3.2:74409432-74409451 | MS.gene052197:intron | 30.0% |
| !!! | AAATTAGTTTTGCTACTCGT+TGG | - | chr3.2:74408519-74408538 | None:intergenic | 30.0% |
| !!! | AGTGGTTATGGTTTTTTACA+AGG | - | chr3.2:74411867-74411886 | None:intergenic | 30.0% |
| !!! | GTTTTTTCTTCTCATTCTAC+AGG | + | chr3.2:74408675-74408694 | MS.gene052197:intron | 30.0% |
| AAAAAGAGCCTTTAGCTACT+TGG | + | chr3.2:74410802-74410821 | MS.gene052197:CDS | 35.0% | |
| AAAAGAGCCTTTAGCTACTT+GGG | + | chr3.2:74410803-74410822 | MS.gene052197:CDS | 35.0% | |
| AACACACGTAGAATGAATAG+TGG | - | chr3.2:74409255-74409274 | None:intergenic | 35.0% | |
| AACCTCTGTACAAATCGTTT+GGG | - | chr3.2:74409850-74409869 | None:intergenic | 35.0% | |
| AATAAACAATGGCATGGAGA+TGG | - | chr3.2:74409172-74409191 | None:intergenic | 35.0% | |
| ACACACGTAGAATGAATAGT+GGG | - | chr3.2:74409254-74409273 | None:intergenic | 35.0% | |
| ACAGGATCAAATTCTGAATC+TGG | - | chr3.2:74407944-74407963 | None:intergenic | 35.0% | |
| AGCTATTGCACCATTTCAAT+TGG | + | chr3.2:74410114-74410133 | MS.gene052197:intron | 35.0% | |
| AGTAACAACTTGGAGAGAAA+AGG | - | chr3.2:74409286-74409305 | None:intergenic | 35.0% | |
| ATACAATGATATGAGTCGCT+TGG | - | chr3.2:74410157-74410176 | None:intergenic | 35.0% | |
| CAAAACATAACCAGTGGTTA+TGG | - | chr3.2:74411879-74411898 | None:intergenic | 35.0% | |
| CAAAATGAGGGACTAATATG+GGG | + | chr3.2:74408436-74408455 | MS.gene052197:intron | 35.0% | |
| CAAAGTAATGTTCTCCTTCA+GGG | - | chr3.2:74407847-74407866 | None:intergenic | 35.0% | |
| CATTCAGTGAGGTTGAATAA+CGG | + | chr3.2:74410442-74410461 | MS.gene052197:intron | 35.0% | |
| GAATACTTACCAATGAGACA+AGG | + | chr3.2:74411042-74411061 | MS.gene052197:CDS | 35.0% | |
| GAGGTATAAGAAATTGGAAG+AGG | + | chr3.2:74409617-74409636 | MS.gene052197:intron | 35.0% | |
| GATCTTCTGATAGCATATGA+AGG | + | chr3.2:74408272-74408291 | MS.gene052197:intron | 35.0% | |
| GGAATTTCATACCCTACTAT+TGG | + | chr3.2:74409309-74409328 | MS.gene052197:intron | 35.0% | |
| GTGACCATCCAAAATTAGAA+TGG | + | chr3.2:74409089-74409108 | MS.gene052197:intron | 35.0% | |
| GTTTGTTTGGCATTAGCATT+TGG | + | chr3.2:74408127-74408146 | MS.gene052197:intron | 35.0% | |
| TACAATGATATGAGTCGCTT+GGG | - | chr3.2:74410156-74410175 | None:intergenic | 35.0% | |
| TATAGATAAGTTCCCAGAAG+AGG | + | chr3.2:74409806-74409825 | MS.gene052197:intron | 35.0% | |
| TCGGTTGAGGTATAAGAAAT+TGG | + | chr3.2:74409611-74409630 | MS.gene052197:intron | 35.0% | |
| TCTCTCCAAGTTGTTACTAA+GGG | + | chr3.2:74409288-74409307 | MS.gene052197:intron | 35.0% | |
| TGATGAGCATGAATCTTGAT+AGG | + | chr3.2:74411461-74411480 | MS.gene052197:intron | 35.0% | |
| TGTAGCAATTGTTCTCGAAA+TGG | - | chr3.2:74408718-74408737 | None:intergenic | 35.0% | |
| TGTCAGTTTGAAAATGTACC+TGG | - | chr3.2:74409909-74409928 | None:intergenic | 35.0% | |
| TTCTCTCCAAGTTGTTACTA+AGG | + | chr3.2:74409287-74409306 | MS.gene052197:intron | 35.0% | |
| TTGTACATGTGTACAGTGTT+TGG | + | chr3.2:74410009-74410028 | MS.gene052197:intron | 35.0% | |
| TTTAAGTACATGGAACAGCT+GGG | + | chr3.2:74411697-74411716 | MS.gene052197:CDS | 35.0% | |
| TTTCCATAACACATTCAGTG+AGG | + | chr3.2:74410431-74410450 | MS.gene052197:intron | 35.0% | |
| ! | CTAATTTTGGATGGTCACAA+AGG | - | chr3.2:74409087-74409106 | None:intergenic | 35.0% |
| ! | CTTAGCTGAACTATTTTCAC+AGG | + | chr3.2:74408792-74408811 | MS.gene052197:CDS | 35.0% |
| ! | GACATGACTAGTTACTTGTA+GGG | + | chr3.2:74409345-74409364 | MS.gene052197:intron | 35.0% |
| ! | GATGCCATTCTAATTTTGGA+TGG | - | chr3.2:74409096-74409115 | None:intergenic | 35.0% |
| ! | GCGTTTTACACTATCAATGT+GGG | - | chr3.2:74409210-74409229 | None:intergenic | 35.0% |
| ! | TCAACCGAAAAGCACAAAAA+GGG | - | chr3.2:74409599-74409618 | None:intergenic | 35.0% |
| ! | TGTACTTTGTTTATGAGGTC+AGG | + | chr3.2:74408493-74408512 | MS.gene052197:intron | 35.0% |
| ! | TTCTCCCTTTTTGTGCTTTT+CGG | + | chr3.2:74409592-74409611 | MS.gene052197:intron | 35.0% |
| !! | TTTTAAGTACATGGAACAGC+TGG | + | chr3.2:74411696-74411715 | MS.gene052197:CDS | 35.0% |
| !!! | AAATTGGAAGAGGTGCTTTT+CGG | + | chr3.2:74409627-74409646 | MS.gene052197:intron | 35.0% |
| AAAGATCTCTCTACCTGAAC+TGG | + | chr3.2:74410303-74410322 | MS.gene052197:intron | 40.0% | |
| AATGTGAAACTGTTACCGCT+AGG | + | chr3.2:74411072-74411091 | MS.gene052197:CDS | 40.0% | |
| ACGTAGATTGCATTTCTGAC+AGG | - | chr3.2:74410366-74410385 | None:intergenic | 40.0% | |
| ATCACTCAACCTGAGTTCAA+GGG | - | chr3.2:74411758-74411777 | None:intergenic | 40.0% | |
| ATCTTTCTTGCAGCAAAGCT+TGG | + | chr3.2:74410875-74410894 | MS.gene052197:intron | 40.0% | |
| ATGTGAAACTGTTACCGCTA+GGG | + | chr3.2:74411073-74411092 | MS.gene052197:CDS | 40.0% | |
| CAACCTCACTGAATGTGTTA+TGG | - | chr3.2:74410437-74410456 | None:intergenic | 40.0% | |
| CAACCTCTGTACAAATCGTT+TGG | - | chr3.2:74409851-74409870 | None:intergenic | 40.0% | |
| CCAAAGAGTGGTTTAGCTAA+TGG | + | chr3.2:74410774-74410793 | MS.gene052197:CDS | 40.0% | |
| CCAAAGTAATGTTCTCCTTC+AGG | - | chr3.2:74407848-74407867 | None:intergenic | 40.0% | |
| CCATTAGCTAAACCACTCTT+TGG | - | chr3.2:74410777-74410796 | None:intergenic | 40.0% | |
| CCTGAAGGAGAACATTACTT+TGG | + | chr3.2:74407845-74407864 | MS.gene052197:CDS | 40.0% | |
| CCTGCAAATCCATTCTACAA+GGG | - | chr3.2:74409444-74409463 | None:intergenic | 40.0% | |
| CTTCAGTGCAGACATTCTTT+GGG | + | chr3.2:74411929-74411948 | MS.gene052197:CDS | 40.0% | |
| GGCTACGTTGTTTGTGAATA+TGG | + | chr3.2:74408919-74408938 | MS.gene052197:intron | 40.0% | |
| GTCTAGAGAACTGGATCTAA+AGG | - | chr3.2:74409150-74409169 | None:intergenic | 40.0% | |
| TACTTTGGCCTCGAGAATTT+CGG | + | chr3.2:74407860-74407879 | MS.gene052197:CDS | 40.0% | |
| TATCACTCAACCTGAGTTCA+AGG | - | chr3.2:74411759-74411778 | None:intergenic | 40.0% | |
| TGATGAGCAAAGATGCCAAA+TGG | + | chr3.2:74411320-74411339 | MS.gene052197:intron | 40.0% | |
| TTCTACACATGTTCCAGTTC+AGG | - | chr3.2:74410319-74410338 | None:intergenic | 40.0% | |
| TTGCAGTAGTTGTCCATGTT+GGG | + | chr3.2:74411812-74411831 | MS.gene052197:CDS | 40.0% | |
| TTGGGTGCACAAAAACTTTC+AGG | + | chr3.2:74410821-74410840 | MS.gene052197:CDS | 40.0% | |
| TTTGCAGTAGTTGTCCATGT+TGG | + | chr3.2:74411811-74411830 | MS.gene052197:CDS | 40.0% | |
| ! | AAGTATTGCCGAAATTCTCG+AGG | - | chr3.2:74407871-74407890 | None:intergenic | 40.0% |
| ! | CTCAACCGAAAAGCACAAAA+AGG | - | chr3.2:74409600-74409619 | None:intergenic | 40.0% |
| ! | CTTTTTGTGCTTTTCGGTTG+AGG | + | chr3.2:74409598-74409617 | MS.gene052197:intron | 40.0% |
| ! | GAACTTGATGGTTAGGATGA+TGG | + | chr3.2:74410214-74410233 | MS.gene052197:intron | 40.0% |
| ! | GGACATGACTAGTTACTTGT+AGG | + | chr3.2:74409344-74409363 | MS.gene052197:intron | 40.0% |
| ! | GGCGTTTTACACTATCAATG+TGG | - | chr3.2:74409211-74409230 | None:intergenic | 40.0% |
| ! | TTATTGCAACAGCGTTTTGC+AGG | + | chr3.2:74407892-74407911 | MS.gene052197:CDS | 40.0% |
| ! | TTGTAGAATGGATTTGCAGG+CGG | + | chr3.2:74409444-74409463 | MS.gene052197:intron | 40.0% |
| !! | TTCTGGTTCTAAACTCGAGA+AGG | + | chr3.2:74407805-74407824 | MS.gene052197:CDS | 40.0% |
| !!! | CTTGATCGTCTTTTTCAGCA+CGG | - | chr3.2:74410719-74410738 | None:intergenic | 40.0% |
| !!! | TTGATCGTCTTTTTCAGCAC+GGG | - | chr3.2:74410718-74410737 | None:intergenic | 40.0% |
| AGATGAATGACCAAGACACG+TGG | - | chr3.2:74411670-74411689 | None:intergenic | 45.0% | |
| AGCTGAGAAGCAACTAAGCA+GGG | - | chr3.2:74410070-74410089 | None:intergenic | 45.0% | |
| AGGCCCTACAAAGAATTTGG+TGG | - | chr3.2:74408179-74408198 | None:intergenic | 45.0% | |
| ATGAATGACCAAGACACGTG+GGG | - | chr3.2:74411668-74411687 | None:intergenic | 45.0% | |
| ATGGAGATGGTCTAGAGAAC+TGG | - | chr3.2:74409159-74409178 | None:intergenic | 45.0% | |
| ATTGCGAATGGACCAAAGAG+TGG | + | chr3.2:74410762-74410781 | MS.gene052197:CDS | 45.0% | |
| CAAGATTCATGCTCATCACG+TGG | - | chr3.2:74411459-74411478 | None:intergenic | 45.0% | |
| CAGACATAATGTCCGTGGTT+GGG | - | chr3.2:74411844-74411863 | None:intergenic | 45.0% | |
| CCATTCGCAATCTTCTCAGA+AGG | - | chr3.2:74410753-74410772 | None:intergenic | 45.0% | |
| CCTCATATGCAAGCAATGTC+AGG | - | chr3.2:74408843-74408862 | None:intergenic | 45.0% | |
| CCTGACATTGCTTGCATATG+AGG | + | chr3.2:74408840-74408859 | MS.gene052197:intron | 45.0% | |
| CGTCGTCAAAACATAACCAG+TGG | - | chr3.2:74411885-74411904 | None:intergenic | 45.0% | |
| CGTGCTGAAAAAGACGATCA+AGG | + | chr3.2:74410717-74410736 | MS.gene052197:CDS | 45.0% | |
| CTCCCAAACGATTTGTACAG+AGG | + | chr3.2:74409845-74409864 | MS.gene052197:CDS | 45.0% | |
| GAGAGGCCCTACAAAGAATT+TGG | - | chr3.2:74408182-74408201 | None:intergenic | 45.0% | |
| GATAGTGTAAAACGCCACAC+TGG | + | chr3.2:74409215-74409234 | MS.gene052197:intron | 45.0% | |
| GATGAATGACCAAGACACGT+GGG | - | chr3.2:74411669-74411688 | None:intergenic | 45.0% | |
| GCCTGCAAATCCATTCTACA+AGG | - | chr3.2:74409445-74409464 | None:intergenic | 45.0% | |
| GCTTCAGTGCAGACATTCTT+TGG | + | chr3.2:74411928-74411947 | MS.gene052197:CDS | 45.0% | |
| GGTAAGACAGCTTCTTGTAG+CGG | - | chr3.2:74411723-74411742 | None:intergenic | 45.0% | |
| GTACCTGGTGCATATAGCTA+CGG | - | chr3.2:74409894-74409913 | None:intergenic | 45.0% | |
| GTTCAAGGGGAAAGACAACA+CGG | - | chr3.2:74411744-74411763 | None:intergenic | 45.0% | |
| GTTTGCAAGAAGCTCAGAAG+AGG | + | chr3.2:74411626-74411645 | MS.gene052197:intron | 45.0% | |
| TAAAACGCCACACTGGAACT+TGG | + | chr3.2:74409222-74409241 | MS.gene052197:intron | 45.0% | |
| TAGTTGTCCATGTTGGGAGT+GGG | + | chr3.2:74411818-74411837 | MS.gene052197:CDS | 45.0% | |
| TCACTCAACCTGAGTTCAAG+GGG | - | chr3.2:74411757-74411776 | None:intergenic | 45.0% | |
| TCTAAACTCGAGAAGGCTCT+CGG | + | chr3.2:74407812-74407831 | MS.gene052197:CDS | 45.0% | |
| TGAGTTACCTTCACAGGTGA+AGG | + | chr3.2:74410505-74410524 | MS.gene052197:intron | 45.0% | |
| TTGCAAGCACCTTGTCTCAT+TGG | - | chr3.2:74411054-74411073 | None:intergenic | 45.0% | |
| TTGTCTTTCCCCTTGAACTC+AGG | + | chr3.2:74411746-74411765 | MS.gene052197:CDS | 45.0% | |
| TTGTGCACCCAAGTAGCTAA+AGG | - | chr3.2:74410813-74410832 | None:intergenic | 45.0% | |
| ! | AGGATGATGGTTCACTAGCT+GGG | + | chr3.2:74410227-74410246 | MS.gene052197:intron | 45.0% |
| ! | CCCTTGTAGAATGGATTTGC+AGG | + | chr3.2:74409441-74409460 | MS.gene052197:intron | 45.0% |
| ! | CCTTCTGAGAAGATTGCGAA+TGG | + | chr3.2:74410750-74410769 | MS.gene052197:CDS | 45.0% |
| ! | GGGACCTAATTGATGGTAAG+TGG | + | chr3.2:74408324-74408343 | MS.gene052197:intron | 45.0% |
| ! | TAGGATGATGGTTCACTAGC+TGG | + | chr3.2:74410226-74410245 | MS.gene052197:intron | 45.0% |
| ! | TTTTGACGACGAAACTGTCG+AGG | + | chr3.2:74411894-74411913 | MS.gene052197:CDS | 45.0% |
| !! | TTTTCTGTGACAAGTGCTGC+AGG | + | chr3.2:74411201-74411220 | MS.gene052197:CDS | 45.0% |
| AGTTCCCAGAAGAGGAAGAC+AGG | + | chr3.2:74409814-74409833 | MS.gene052197:CDS | 50.0% | |
| ATGATGGTTCACTAGCTGGG+CGG | + | chr3.2:74410230-74410249 | MS.gene052197:intron | 50.0% | |
| CAAGGCAGACATAATGTCCG+TGG | - | chr3.2:74411849-74411868 | None:intergenic | 50.0% | |
| CACACCTGTCTTCCTCTTCT+GGG | - | chr3.2:74409821-74409840 | None:intergenic | 50.0% | |
| CAGCTGAGAAGCAACTAAGC+AGG | - | chr3.2:74410071-74410090 | None:intergenic | 50.0% | |
| CTCGGCGATAATTTCCCTGA+AGG | + | chr3.2:74407830-74407849 | MS.gene052197:CDS | 50.0% | |
| CTCGTCTGAGTTACCTTCAC+AGG | + | chr3.2:74410499-74410518 | MS.gene052197:intron | 50.0% | |
| CTGTGAAGGTAACTCAGACG+AGG | - | chr3.2:74410501-74410520 | None:intergenic | 50.0% | |
| CTTCCGTAGCTATATGCACC+AGG | + | chr3.2:74409888-74409907 | MS.gene052197:CDS | 50.0% | |
| CTTTGTAGGGCCTCTCAAAC+AGG | + | chr3.2:74408186-74408205 | MS.gene052197:intron | 50.0% | |
| GAAGGTAACTCAGACGAGGA+AGG | - | chr3.2:74410497-74410516 | None:intergenic | 50.0% | |
| GCAGACATAATGTCCGTGGT+TGG | - | chr3.2:74411845-74411864 | None:intergenic | 50.0% | |
| GGAATGACCTTCACCTGTGA+AGG | - | chr3.2:74410515-74410534 | None:intergenic | 50.0% | |
| GTAGTTGTCCATGTTGGGAG+TGG | + | chr3.2:74411817-74411836 | MS.gene052197:CDS | 50.0% | |
| GTGTTTGCCAAGTTCCAGTG+TGG | - | chr3.2:74409232-74409251 | None:intergenic | 50.0% | |
| TCACACCTGTCTTCCTCTTC+TGG | - | chr3.2:74409822-74409841 | None:intergenic | 50.0% | |
| TGAATGACCAAGACACGTGG+GGG | - | chr3.2:74411667-74411686 | None:intergenic | 50.0% | |
| ! | AATGGTGGGACCTGTTTGAG+AGG | - | chr3.2:74408199-74408218 | None:intergenic | 50.0% |
| ! | TAGAATGGATTTGCAGGCGG+TGG | + | chr3.2:74409447-74409466 | MS.gene052197:intron | 50.0% |
| AAAGAGACCCCCACGTGTCT+TGG | + | chr3.2:74411657-74411676 | MS.gene052197:CDS | 55.0% | |
| CTAGCTGGGCGGTCAATAGA+AGG | + | chr3.2:74410241-74410260 | MS.gene052197:intron | 55.0% | |
| TGACGACGAAACTGTCGAGG+TGG | + | chr3.2:74411897-74411916 | MS.gene052197:CDS | 55.0% | |
| GGTTGGGCCCACTCCCAACA+TGG | - | chr3.2:74411828-74411847 | None:intergenic | 65.0% | |
| GTTGGGAGTGGGCCCAACCA+CGG | + | chr3.2:74411829-74411848 | MS.gene052197:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 74407797 | 74412023 | 74407797 | ID=MS.gene052197 |
| chr3.2 | mRNA | 74407797 | 74412023 | 74407797 | ID=MS.gene052197.t1;Parent=MS.gene052197 |
| chr3.2 | exon | 74407797 | 74407913 | 74407797 | ID=MS.gene052197.t1.exon1;Parent=MS.gene052197.t1 |
| chr3.2 | CDS | 74407797 | 74407913 | 74407797 | ID=cds.MS.gene052197.t1;Parent=MS.gene052197.t1 |
| chr3.2 | exon | 74408697 | 74408813 | 74408697 | ID=MS.gene052197.t1.exon2;Parent=MS.gene052197.t1 |
| chr3.2 | CDS | 74408697 | 74408813 | 74408697 | ID=cds.MS.gene052197.t1;Parent=MS.gene052197.t1 |
| chr3.2 | exon | 74409811 | 74409909 | 74409811 | ID=MS.gene052197.t1.exon3;Parent=MS.gene052197.t1 |
| chr3.2 | CDS | 74409811 | 74409909 | 74409811 | ID=cds.MS.gene052197.t1;Parent=MS.gene052197.t1 |
| chr3.2 | exon | 74410654 | 74410842 | 74410654 | ID=MS.gene052197.t1.exon4;Parent=MS.gene052197.t1 |
| chr3.2 | CDS | 74410654 | 74410842 | 74410654 | ID=cds.MS.gene052197.t1;Parent=MS.gene052197.t1 |
| chr3.2 | exon | 74411041 | 74411222 | 74411041 | ID=MS.gene052197.t1.exon5;Parent=MS.gene052197.t1 |
| chr3.2 | CDS | 74411041 | 74411222 | 74411041 | ID=cds.MS.gene052197.t1;Parent=MS.gene052197.t1 |
| chr3.2 | exon | 74411627 | 74412023 | 74411627 | ID=MS.gene052197.t1.exon6;Parent=MS.gene052197.t1 |
| chr3.2 | CDS | 74411627 | 74412023 | 74411627 | ID=cds.MS.gene052197.t1;Parent=MS.gene052197.t1 |
| Gene Sequence |
| Protein sequence |
