Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74036.t1 | XP_013447871.1 | 97.2 | 494 | 14 | 0 | 1 | 494 | 44 | 537 | 1.60E-156 | 562.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74036.t1 | A0A072TYI5 | 97.2 | 494 | 14 | 0 | 1 | 494 | 44 | 537 | 1.2e-156 | 562.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene74036 | 0.815531 | 8.81E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene74036 | 0.800007 | 1.76E-48 | -1.69E-46 |
| MS.gene052611 | MS.gene74036 | 0.802295 | 6.00E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene74036 | 0.80484 | 1.78E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene74036 | 0.806543 | 7.82E-50 | -1.69E-46 |
| MS.gene053998 | MS.gene74036 | 0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene055512 | MS.gene74036 | 0.810341 | 1.21E-50 | -1.69E-46 |
| MS.gene055891 | MS.gene74036 | 0.801729 | 7.85E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene74036 | 0.805851 | 1.09E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene74036 | 0.808814 | 2.57E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74036.t1 | MTR_7g023750 | 95.951 | 494 | 20 | 0 | 1 | 494 | 1 | 494 | 0.0 | 949 |
| MS.gene74036.t1 | MTR_7g023750 | 95.951 | 494 | 20 | 0 | 1 | 494 | 47 | 540 | 0.0 | 947 |
| MS.gene74036.t1 | MTR_7g023750 | 95.951 | 494 | 20 | 0 | 1 | 494 | 44 | 537 | 0.0 | 947 |
| MS.gene74036.t1 | MTR_7g023750 | 93.350 | 391 | 26 | 0 | 1 | 391 | 1 | 391 | 0.0 | 715 |
| MS.gene74036.t1 | MTR_7g023750 | 93.350 | 391 | 26 | 0 | 1 | 391 | 44 | 434 | 0.0 | 714 |
| MS.gene74036.t1 | MTR_7g023750 | 93.350 | 391 | 26 | 0 | 1 | 391 | 47 | 437 | 0.0 | 714 |
| MS.gene74036.t1 | MTR_1g067750 | 36.884 | 507 | 280 | 9 | 1 | 489 | 48 | 532 | 2.58e-97 | 304 |
| MS.gene74036.t1 | MTR_1g067750 | 36.253 | 491 | 273 | 9 | 1 | 473 | 39 | 507 | 2.72e-91 | 288 |
| MS.gene74036.t1 | MTR_4g063150 | 36.273 | 499 | 215 | 12 | 1 | 491 | 47 | 450 | 1.23e-86 | 274 |
| MS.gene74036.t1 | MTR_1g067750 | 31.690 | 426 | 251 | 9 | 1 | 408 | 48 | 451 | 7.19e-52 | 182 |
| MS.gene74036.t1 | MTR_1g067750 | 29.851 | 402 | 242 | 9 | 1 | 384 | 48 | 427 | 9.55e-40 | 149 |
| MS.gene74036.t1 | MTR_1g068930 | 48.485 | 132 | 68 | 0 | 344 | 475 | 240 | 371 | 4.16e-35 | 140 |
| MS.gene74036.t1 | MTR_1g068930 | 48.485 | 132 | 68 | 0 | 344 | 475 | 240 | 371 | 5.41e-35 | 139 |
| MS.gene74036.t1 | MTR_2g084410 | 38.053 | 113 | 65 | 1 | 354 | 461 | 19 | 131 | 9.73e-18 | 84.0 |
| MS.gene74036.t1 | MTR_2g084375 | 37.168 | 113 | 66 | 1 | 354 | 461 | 5 | 117 | 1.22e-17 | 83.2 |
| MS.gene74036.t1 | MTR_2g084425 | 38.938 | 113 | 64 | 1 | 354 | 461 | 222 | 334 | 4.96e-17 | 84.7 |
| MS.gene74036.t1 | MTR_2g084425 | 38.938 | 113 | 64 | 1 | 354 | 461 | 222 | 334 | 5.62e-17 | 84.7 |
| MS.gene74036.t1 | MTR_7g102610 | 31.081 | 148 | 97 | 4 | 340 | 482 | 228 | 375 | 7.21e-16 | 81.3 |
| MS.gene74036.t1 | MTR_1g062330 | 31.746 | 126 | 81 | 2 | 362 | 482 | 99 | 224 | 6.75e-13 | 71.6 |
| MS.gene74036.t1 | MTR_1g062330 | 31.746 | 126 | 81 | 2 | 362 | 482 | 99 | 224 | 7.40e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74036.t1 | AT5G13660 | 36.142 | 534 | 257 | 13 | 1 | 492 | 41 | 532 | 1.54e-91 | 289 |
| MS.gene74036.t1 | AT5G13660 | 36.075 | 535 | 257 | 14 | 1 | 492 | 41 | 533 | 7.94e-90 | 285 |
| MS.gene74036.t1 | AT5G59830 | 54.450 | 191 | 73 | 3 | 301 | 491 | 246 | 422 | 2.45e-66 | 220 |
| MS.gene74036.t1 | AT5G59830 | 54.450 | 191 | 73 | 3 | 301 | 491 | 246 | 422 | 2.45e-66 | 220 |
| MS.gene74036.t1 | AT5G59830 | 54.450 | 191 | 73 | 3 | 301 | 491 | 246 | 422 | 2.45e-66 | 220 |
| MS.gene74036.t1 | AT5G13660 | 30.682 | 440 | 245 | 13 | 1 | 410 | 41 | 450 | 5.29e-41 | 153 |
| MS.gene74036.t1 | AT5G13660 | 30.682 | 440 | 245 | 13 | 1 | 410 | 41 | 450 | 5.29e-41 | 153 |
| MS.gene74036.t1 | AT5G13660 | 30.612 | 441 | 245 | 14 | 1 | 410 | 41 | 451 | 2.63e-39 | 148 |
| MS.gene74036.t1 | AT3G53680 | 50.769 | 130 | 64 | 0 | 348 | 477 | 172 | 301 | 5.15e-37 | 145 |
| MS.gene74036.t1 | AT3G53680 | 50.769 | 130 | 64 | 0 | 348 | 477 | 172 | 301 | 5.78e-37 | 145 |
| MS.gene74036.t1 | AT2G37520 | 45.513 | 156 | 75 | 2 | 330 | 477 | 138 | 291 | 7.25e-37 | 145 |
| MS.gene74036.t1 | AT5G13660 | 28.537 | 417 | 238 | 13 | 1 | 387 | 41 | 427 | 6.67e-29 | 119 |
| MS.gene74036.t1 | AT5G13660 | 28.537 | 417 | 238 | 13 | 1 | 387 | 41 | 427 | 6.67e-29 | 119 |
| MS.gene74036.t1 | AT2G27980 | 30.702 | 114 | 74 | 1 | 358 | 466 | 377 | 490 | 3.86e-13 | 72.8 |
| MS.gene74036.t1 | AT2G36720 | 31.897 | 116 | 77 | 1 | 356 | 469 | 258 | 373 | 4.75e-11 | 65.9 |
| MS.gene74036.t1 | AT2G36720 | 31.897 | 116 | 77 | 1 | 356 | 469 | 258 | 373 | 4.75e-11 | 65.9 |
Find 112 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCAACATCTCTAAATTT+TGG | 0.158676 | 7.4:+77462482 | MS.gene74036:CDS |
| CACAGCAGTTCCATTTCTTT+TGG | 0.171039 | 7.4:+77463025 | MS.gene74036:CDS |
| AACATGGGAAGGAATGATTT+TGG | 0.179977 | 7.4:+77462401 | MS.gene74036:CDS |
| TAATAGTTCTGATCCGTTAA+TGG | 0.239862 | 7.4:+77463093 | MS.gene74036:CDS |
| GTGCTATTTACAGGTGGATT+AGG | 0.277455 | 7.4:-77463172 | None:intergenic |
| GAAGGCTTCTTCGCCGTCTT+TGG | 0.290403 | 7.4:-77463241 | None:intergenic |
| AATCTTCAAGGAGTCATAAA+AGG | 0.320515 | 7.4:+77463451 | MS.gene74036:CDS |
| CTTGAGCTTCAGCGCATCTA+TGG | 0.322542 | 7.4:+77463964 | MS.gene74036:CDS |
| CAACACCTTGAGCTGAGTTC+TGG | 0.325535 | 7.4:-77463120 | None:intergenic |
| ATGGGTCACATCTTCAATAA+AGG | 0.329133 | 7.4:+77462665 | MS.gene74036:CDS |
| TGCTATTTACAGGTGGATTA+GGG | 0.335921 | 7.4:-77463171 | None:intergenic |
| TTGATTCACTCAGATCCTTC+TGG | 0.339933 | 7.4:-77463147 | None:intergenic |
| ACCAAAGGAACTTTCGTACT+TGG | 0.339999 | 7.4:+77463804 | MS.gene74036:CDS |
| AATAGTTCTGATCCGTTAAT+GGG | 0.344955 | 7.4:+77463094 | MS.gene74036:CDS |
| CAAGGAGTCATAAAAGGAAC+TGG | 0.362115 | 7.4:+77463457 | MS.gene74036:CDS |
| GTCAAAAGTTTGTTGTCAAC+TGG | 0.363595 | 7.4:+77463286 | MS.gene74036:CDS |
| AACAATGAATGTTTCTCAAT+GGG | 0.370603 | 7.4:+77462256 | MS.gene74036:CDS |
| TCAAAGAATATGTGACTGTT+AGG | 0.374223 | 7.4:-77463683 | None:intergenic |
| TCTCAATGGGAAACCAGTTC+GGG | 0.378276 | 7.4:+77462269 | MS.gene74036:CDS |
| TTCTCAATGGGAAACCAGTT+CGG | 0.391371 | 7.4:+77462268 | MS.gene74036:CDS |
| CAACAATGAATGTTTCTCAA+TGG | 0.391558 | 7.4:+77462255 | MS.gene74036:CDS |
| CACTTCCATTGTTATACGTT+GGG | 0.393576 | 7.4:-77462628 | None:intergenic |
| AGGAGAAACTTTCACAACTA+TGG | 0.396844 | 7.4:+77462898 | MS.gene74036:CDS |
| CAATGGGTCGGTCCTTTGAC+AGG | 0.400048 | 7.4:+77462747 | MS.gene74036:CDS |
| ATGAAAACCTCCAAAAGAAA+TGG | 0.400464 | 7.4:-77463035 | None:intergenic |
| TGGGTCACATCTTCAATAAA+GGG | 0.400593 | 7.4:+77462666 | MS.gene74036:CDS |
| GTTTGAATCCACCTTATCAT+AGG | 0.401573 | 7.4:-77462927 | None:intergenic |
| TCCAAGTACGAAAGTTCCTT+TGG | 0.410052 | 7.4:-77463805 | None:intergenic |
| GAGTTCTGGTTGCCCATTAA+CGG | 0.417278 | 7.4:-77463106 | None:intergenic |
| AGTCACATATTCTTTGAGAA+TGG | 0.417958 | 7.4:+77463689 | MS.gene74036:CDS |
| TCAGACAATTGGCCAGTGAC+TGG | 0.422372 | 7.4:-77462299 | None:intergenic |
| ATAACAATGGGTCAGTCATA+TGG | 0.422911 | 7.4:+77462785 | MS.gene74036:CDS |
| CAGTGGAGTCATTCAGTTGA+GGG | 0.429009 | 7.4:-77463063 | None:intergenic |
| GAAGGGAAGCTGTTAGTAGA+AGG | 0.430702 | 7.4:-77463259 | None:intergenic |
| GGTCCAACCTATGGTAAATC+AGG | 0.436238 | 7.4:+77462878 | MS.gene74036:CDS |
| AAAGTTCCTTTGGTTGATAG+TGG | 0.444705 | 7.4:-77463795 | None:intergenic |
| TTGTTGATGGGTCACAATCA+TGG | 0.445474 | 7.4:+77462701 | MS.gene74036:CDS |
| CTCATGCCCCATGGAATATG+AGG | 0.451401 | 7.4:-77462840 | None:intergenic |
| TGATATCTGCAAGGGGCAAA+AGG | 0.456965 | 7.4:+77463495 | MS.gene74036:CDS |
| ATATTTCCACTTCCAATTGA+CGG | 0.459621 | 7.4:-77462377 | None:intergenic |
| GATGCTATTCAAACTGTGAC+AGG | 0.460759 | 7.4:+77463770 | MS.gene74036:CDS |
| GCATGAGAGCATTACATCAA+TGG | 0.473987 | 7.4:+77462856 | MS.gene74036:CDS |
| CGGTCCTTTGACAGGGGCGA+TGG | 0.475949 | 7.4:+77462755 | MS.gene74036:CDS |
| TCTCCTGATTTACCATAGGT+TGG | 0.477084 | 7.4:-77462881 | None:intergenic |
| TATGGCTCCTTCCTATGATA+AGG | 0.482881 | 7.4:+77462916 | MS.gene74036:CDS |
| TCGGGATTTCACCCAGTCAC+TGG | 0.483723 | 7.4:+77462287 | MS.gene74036:CDS |
| TAAAATATTGTACATGGTCA+AGG | 0.484112 | 7.4:+77463329 | MS.gene74036:CDS |
| ATGAATTTGAGCGTCACGCT+GGG | 0.489424 | 7.4:+77463645 | MS.gene74036:CDS |
| CCAAAATTTAGAGATGTTGA+AGG | 0.491770 | 7.4:-77462482 | None:intergenic |
| AACAAGAAACAAGCAGTTGA+AGG | 0.495670 | 7.4:+77462212 | MS.gene74036:CDS |
| AACATTCCGTCAATTGGAAG+TGG | 0.497012 | 7.4:+77462371 | MS.gene74036:CDS |
| GATGGAAATTTCATAACAAT+GGG | 0.497410 | 7.4:+77462773 | MS.gene74036:CDS |
| AATATATTGTTATCAGCTGC+TGG | 0.498749 | 7.4:-77462557 | None:intergenic |
| TATGGTAATGATTCGTCTAT+CGG | 0.508871 | 7.4:+77462431 | MS.gene74036:CDS |
| TCACTTCCATTGTTATACGT+TGG | 0.511609 | 7.4:-77462629 | None:intergenic |
| GACTGGGTGAAATCCCGAAC+TGG | 0.512048 | 7.4:-77462282 | None:intergenic |
| CATGAGAGCATTACATCAAT+GGG | 0.516985 | 7.4:+77462857 | MS.gene74036:CDS |
| ACATCAATGGGTCCAACCTA+TGG | 0.518084 | 7.4:+77462869 | MS.gene74036:CDS |
| TCTAGGAACCTCATATTCCA+TGG | 0.519808 | 7.4:+77462832 | MS.gene74036:CDS |
| CGATGGAAATTTCATAACAA+TGG | 0.521756 | 7.4:+77462772 | MS.gene74036:CDS |
| CTCTTGAACAACAGCATAGA+CGG | 0.530061 | 7.4:-77463717 | None:intergenic |
| AAGTGACAACACCATTGCTA+TGG | 0.530676 | 7.4:+77462646 | MS.gene74036:CDS |
| GAGTTGCCGCTGTCAAAAGA+TGG | 0.533466 | 7.4:-77462965 | None:intergenic |
| AGTTTCTCCTGATTTACCAT+AGG | 0.534049 | 7.4:-77462885 | None:intergenic |
| CTAGGAACCTCATATTCCAT+GGG | 0.535133 | 7.4:+77462833 | MS.gene74036:CDS |
| TATGAATTTGAGCGTCACGC+TGG | 0.536356 | 7.4:+77463644 | MS.gene74036:CDS |
| CAGTTGAAGGTGTTAGTGAC+AGG | 0.538066 | 7.4:+77462225 | MS.gene74036:CDS |
| CACATCTTCAATAAAGGGGA+AGG | 0.546475 | 7.4:+77462671 | MS.gene74036:CDS |
| CAGACAATTGGCCAGTGACT+GGG | 0.547013 | 7.4:-77462298 | None:intergenic |
| ATTTCCATCGCCCCTGTCAA+AGG | 0.551415 | 7.4:-77462759 | None:intergenic |
| GATGACAATTTGATATCTCT+AGG | 0.565214 | 7.4:+77462815 | MS.gene74036:CDS |
| GAATCCACCTTATCATAGGA+AGG | 0.567729 | 7.4:-77462923 | None:intergenic |
| AGTGACAACACCATTGCTAT+GGG | 0.569952 | 7.4:+77462647 | MS.gene74036:CDS |
| CTGTCAATGTCTCATTCCAC+AGG | 0.570056 | 7.4:+77462455 | MS.gene74036:CDS |
| TATCAGCTGCTGGCGTGCCA+TGG | 0.576021 | 7.4:-77462547 | None:intergenic |
| CCAGTGGAGTCATTCAGTTG+AGG | 0.578078 | 7.4:-77463064 | None:intergenic |
| CCTCAACTGAATGACTCCAC+TGG | 0.578212 | 7.4:+77463064 | MS.gene74036:CDS |
| AAAATATTGTACATGGTCAA+GGG | 0.581599 | 7.4:+77463330 | MS.gene74036:CDS |
| AATGGGTCGGTCCTTTGACA+GGG | 0.582450 | 7.4:+77462748 | MS.gene74036:CDS |
| GGAAGTGGAAATATAAACAT+GGG | 0.583747 | 7.4:+77462386 | MS.gene74036:CDS |
| GGCTCCTTCCTATGATAAGG+TGG | 0.586030 | 7.4:+77462919 | MS.gene74036:CDS |
| TTCCGGTAAAATATTGTACA+TGG | 0.591553 | 7.4:+77463323 | MS.gene74036:CDS |
| AATGGGTCAGTCATATGGAA+AGG | 0.594796 | 7.4:+77462790 | MS.gene74036:CDS |
| AACTGCTGTGACAATTACTC+AGG | 0.595100 | 7.4:-77463012 | None:intergenic |
| GTGGAAATATAAACATGGGA+AGG | 0.596002 | 7.4:+77462390 | MS.gene74036:CDS |
| TTTGGAGTGCTATTTACAGG+TGG | 0.603301 | 7.4:-77463178 | None:intergenic |
| CAAAATTTAGAGATGTTGAA+GGG | 0.603626 | 7.4:-77462481 | None:intergenic |
| TGGAAGTGGAAATATAAACA+TGG | 0.609494 | 7.4:+77462385 | MS.gene74036:CDS |
| GAAGCTCAAGAGTAGCAGCT+TGG | 0.610166 | 7.4:-77463951 | None:intergenic |
| GGCAACCAGAACTCAGCTCA+AGG | 0.613118 | 7.4:+77463115 | MS.gene74036:CDS |
| TGTTCATGTGATATCTGCAA+GGG | 0.617361 | 7.4:+77463487 | MS.gene74036:CDS |
| AGATGTTGAAGGGCCTCCTG+TGG | 0.619182 | 7.4:-77462471 | None:intergenic |
| AGAACTATTAATCATTCCAG+TGG | 0.619671 | 7.4:-77463080 | None:intergenic |
| GGGTCACATCTTCAATAAAG+GGG | 0.624180 | 7.4:+77462667 | MS.gene74036:CDS |
| CAAGTCAGAGATTCTGACCA+TGG | 0.628932 | 7.4:+77462530 | MS.gene74036:CDS |
| GTGTTCATGTGATATCTGCA+AGG | 0.629189 | 7.4:+77463486 | MS.gene74036:CDS |
| TCAGACCCAACGTATAACAA+TGG | 0.630204 | 7.4:+77462623 | MS.gene74036:CDS |
| ACATCTTCAATAAAGGGGAA+GGG | 0.634399 | 7.4:+77462672 | MS.gene74036:CDS |
| GCTTCAGCGCATCTATGGAA+AGG | 0.634908 | 7.4:+77463969 | MS.gene74036:CDS |
| TCAAGGTGTTGACAGCCAGA+AGG | 0.640542 | 7.4:+77463132 | MS.gene74036:CDS |
| TGTAATGCTCTCATGCCCCA+TGG | 0.641796 | 7.4:-77462849 | None:intergenic |
| GATGGGTCACAATCATGGCA+AGG | 0.642988 | 7.4:+77462706 | MS.gene74036:CDS |
| ATGGGTCGGTCCTTTGACAG+GGG | 0.647731 | 7.4:+77462749 | MS.gene74036:CDS |
| AAGGAGTCATAAAAGGAACT+GGG | 0.654430 | 7.4:+77463458 | MS.gene74036:CDS |
| TGCAGATATCACATGAACAC+AGG | 0.662846 | 7.4:-77463483 | None:intergenic |
| TGAATTTGAGCGTCACGCTG+GGG | 0.673881 | 7.4:+77463646 | MS.gene74036:CDS |
| TCAATGTCTCATTCCACAGG+AGG | 0.675589 | 7.4:+77462458 | MS.gene74036:CDS |
| CAGGAGCCACTATCAACCAA+AGG | 0.676859 | 7.4:+77463789 | MS.gene74036:CDS |
| ATATTGTACATGGTCAAGGG+AGG | 0.698377 | 7.4:+77463333 | MS.gene74036:CDS |
| GAAGATGTGACCCATAGCAA+TGG | 0.703236 | 7.4:-77462657 | None:intergenic |
| TAGGAACCTCATATTCCATG+GGG | 0.726058 | 7.4:+77462834 | MS.gene74036:CDS |
| GTTCATGTGATATCTGCAAG+GGG | 0.764444 | 7.4:+77463488 | MS.gene74036:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAATTAGAAGTTGAAA+AGG | - | chr7.4:77463905-77463924 | None:intergenic | 15.0% |
| !!! | AAAAGTTTTAAAATGTTAGT+AGG | - | chr7.4:77463411-77463430 | None:intergenic | 15.0% |
| !!! | AGATCAACATATTTTATCAA+TGG | + | chr7.4:77462730-77462749 | MS.gene74036:CDS | 20.0% |
| !!! | GATAACAATATATTTTCGAT+AGG | + | chr7.4:77462566-77462585 | MS.gene74036:CDS | 20.0% |
| !!! | GATCAACATATTTTATCAAT+GGG | + | chr7.4:77462731-77462750 | MS.gene74036:CDS | 20.0% |
| !!! | TCATTTTTAGCATTAGATTT+TGG | - | chr7.4:77463199-77463218 | None:intergenic | 20.0% |
| ! | AAAATATTGTACATGGTCAA+GGG | + | chr7.4:77463330-77463349 | MS.gene74036:CDS | 25.0% |
| ! | AACAATGAATGTTTCTCAAT+GGG | + | chr7.4:77462256-77462275 | MS.gene74036:CDS | 25.0% |
| ! | CAAAATTTAGAGATGTTGAA+GGG | - | chr7.4:77462484-77462503 | None:intergenic | 25.0% |
| ! | GATGGAAATTTCATAACAAT+GGG | + | chr7.4:77462773-77462792 | MS.gene74036:CDS | 25.0% |
| ! | TAAAAACAAAGAACCAAAGA+CGG | + | chr7.4:77463228-77463247 | MS.gene74036:CDS | 25.0% |
| ! | TAAAATATTGTACATGGTCA+AGG | + | chr7.4:77463329-77463348 | MS.gene74036:CDS | 25.0% |
| !! | AAAACTTTTGATGTTCTCAT+TGG | + | chr7.4:77463422-77463441 | MS.gene74036:intron | 25.0% |
| !! | AACATATTTTATCAATGGGT+CGG | + | chr7.4:77462735-77462754 | MS.gene74036:CDS | 25.0% |
| AATATATTGTTATCAGCTGC+TGG | - | chr7.4:77462560-77462579 | None:intergenic | 30.0% | |
| AATCTTCAAGGAGTCATAAA+AGG | + | chr7.4:77463451-77463470 | MS.gene74036:CDS | 30.0% | |
| AGAACTATTAATCATTCCAG+TGG | - | chr7.4:77463083-77463102 | None:intergenic | 30.0% | |
| ATATTTCCACTTCCAATTGA+CGG | - | chr7.4:77462380-77462399 | None:intergenic | 30.0% | |
| ATGAAAACCTCCAAAAGAAA+TGG | - | chr7.4:77463038-77463057 | None:intergenic | 30.0% | |
| CAACAATGAATGTTTCTCAA+TGG | + | chr7.4:77462255-77462274 | MS.gene74036:CDS | 30.0% | |
| CCAAAATTTAGAGATGTTGA+AGG | - | chr7.4:77462485-77462504 | None:intergenic | 30.0% | |
| CGATGGAAATTTCATAACAA+TGG | + | chr7.4:77462772-77462791 | MS.gene74036:CDS | 30.0% | |
| GACTTTAATATCTGATGCAA+GGG | - | chr7.4:77463866-77463885 | None:intergenic | 30.0% | |
| GATAAAAACATTCCGTCAAT+TGG | + | chr7.4:77462365-77462384 | MS.gene74036:CDS | 30.0% | |
| GATGACAATTTGATATCTCT+AGG | + | chr7.4:77462815-77462834 | MS.gene74036:CDS | 30.0% | |
| GGAAGTGGAAATATAAACAT+GGG | + | chr7.4:77462386-77462405 | MS.gene74036:CDS | 30.0% | |
| TCAAAGAATATGTGACTGTT+AGG | - | chr7.4:77463686-77463705 | None:intergenic | 30.0% | |
| TGACTTTAATATCTGATGCA+AGG | - | chr7.4:77463867-77463886 | None:intergenic | 30.0% | |
| TGGAAGTGGAAATATAAACA+TGG | + | chr7.4:77462385-77462404 | MS.gene74036:CDS | 30.0% | |
| TTCCGGTAAAATATTGTACA+TGG | + | chr7.4:77463323-77463342 | MS.gene74036:CDS | 30.0% | |
| ! | AACAAACTTTTGACATTCGA+AGG | - | chr7.4:77463280-77463299 | None:intergenic | 30.0% |
| ! | AATTTTTGCAGATCATTGCT+AGG | - | chr7.4:77463601-77463620 | None:intergenic | 30.0% |
| ! | ACAAACTTTTGACATTCGAA+GGG | - | chr7.4:77463279-77463298 | None:intergenic | 30.0% |
| ! | AGTCACATATTCTTTGAGAA+TGG | + | chr7.4:77463689-77463708 | MS.gene74036:CDS | 30.0% |
| ! | CCTTCAACATCTCTAAATTT+TGG | + | chr7.4:77462482-77462501 | MS.gene74036:CDS | 30.0% |
| ! | GACCATGTACAATATTTTAC+CGG | - | chr7.4:77463328-77463347 | None:intergenic | 30.0% |
| ! | TATGGTAATGATTCGTCTAT+CGG | + | chr7.4:77462431-77462450 | MS.gene74036:CDS | 30.0% |
| ! | TCAACATCTCTAAATTTTGG+TGG | + | chr7.4:77462485-77462504 | MS.gene74036:CDS | 30.0% |
| !! | AATAGTTCTGATCCGTTAAT+GGG | + | chr7.4:77463094-77463113 | MS.gene74036:CDS | 30.0% |
| !! | AATGATTTTGGGAATCAGTA+TGG | + | chr7.4:77462413-77462432 | MS.gene74036:CDS | 30.0% |
| !! | CTCTAAATTTTGGTGGTATA+AGG | + | chr7.4:77462492-77462511 | MS.gene74036:CDS | 30.0% |
| !! | TAATAGTTCTGATCCGTTAA+TGG | + | chr7.4:77463093-77463112 | MS.gene74036:CDS | 30.0% |
| !! | TTGTCAACTGGTATTTTTGA+TGG | + | chr7.4:77463298-77463317 | MS.gene74036:CDS | 30.0% |
| AACAAGAAACAAGCAGTTGA+AGG | + | chr7.4:77462212-77462231 | MS.gene74036:CDS | 35.0% | |
| AAGGAGTCATAAAAGGAACT+GGG | + | chr7.4:77463458-77463477 | MS.gene74036:CDS | 35.0% | |
| ACATCTTCAATAAAGGGGAA+GGG | + | chr7.4:77462672-77462691 | MS.gene74036:CDS | 35.0% | |
| AGGAGAAACTTTCACAACTA+TGG | + | chr7.4:77462898-77462917 | MS.gene74036:CDS | 35.0% | |
| AGTTTCTCCTGATTTACCAT+AGG | - | chr7.4:77462888-77462907 | None:intergenic | 35.0% | |
| ATAACAATGGGTCAGTCATA+TGG | + | chr7.4:77462785-77462804 | MS.gene74036:CDS | 35.0% | |
| ATGGGTCACATCTTCAATAA+AGG | + | chr7.4:77462665-77462684 | MS.gene74036:CDS | 35.0% | |
| CACTTCCATTGTTATACGTT+GGG | - | chr7.4:77462631-77462650 | None:intergenic | 35.0% | |
| CATTGGCAGAAAAATCTTCA+AGG | + | chr7.4:77463439-77463458 | MS.gene74036:intron | 35.0% | |
| CTGCAAAAATTCTGTCATGA+AGG | + | chr7.4:77463610-77463629 | MS.gene74036:intron | 35.0% | |
| CTTTCGTACTTGGAAATGTA+AGG | + | chr7.4:77463814-77463833 | MS.gene74036:intron | 35.0% | |
| GTGGAAATATAAACATGGGA+AGG | + | chr7.4:77462390-77462409 | MS.gene74036:CDS | 35.0% | |
| GTTTGAATCCACCTTATCAT+AGG | - | chr7.4:77462930-77462949 | None:intergenic | 35.0% | |
| TCACTTCCATTGTTATACGT+TGG | - | chr7.4:77462632-77462651 | None:intergenic | 35.0% | |
| TGGGTCACATCTTCAATAAA+GGG | + | chr7.4:77462666-77462685 | MS.gene74036:CDS | 35.0% | |
| TGTTCATGTGATATCTGCAA+GGG | + | chr7.4:77463487-77463506 | MS.gene74036:CDS | 35.0% | |
| ! | AACATGGGAAGGAATGATTT+TGG | + | chr7.4:77462401-77462420 | MS.gene74036:CDS | 35.0% |
| ! | ACAATTCCATCTTTTGACAG+CGG | + | chr7.4:77462959-77462978 | MS.gene74036:CDS | 35.0% |
| ! | ACATGGGAAGGAATGATTTT+GGG | + | chr7.4:77462402-77462421 | MS.gene74036:CDS | 35.0% |
| !! | AAAGTTCCTTTGGTTGATAG+TGG | - | chr7.4:77463798-77463817 | None:intergenic | 35.0% |
| !! | CATGAGAGCATTACATCAAT+GGG | + | chr7.4:77462857-77462876 | MS.gene74036:CDS | 35.0% |
| !! | GTCAAAAGTTTGTTGTCAAC+TGG | + | chr7.4:77463286-77463305 | MS.gene74036:CDS | 35.0% |
| !! | TGCTATTTACAGGTGGATTA+GGG | - | chr7.4:77463174-77463193 | None:intergenic | 35.0% |
| !! | TGGTATTTTTGATGGCATTC+CGG | + | chr7.4:77463306-77463325 | MS.gene74036:CDS | 35.0% |
| !!! | ACTGTTAGGATGTTTTGACT+TGG | - | chr7.4:77463672-77463691 | None:intergenic | 35.0% |
| !!! | GAAGGGAGTTTTTTGTTGAT+GGG | + | chr7.4:77462689-77462708 | MS.gene74036:CDS | 35.0% |
| !!! | GATTTTGGAGTGCTATTTAC+AGG | - | chr7.4:77463184-77463203 | None:intergenic | 35.0% |
| !!! | TTTTTGGATCTGGTCTTGTA+CGG | + | chr7.4:77462327-77462346 | MS.gene74036:CDS | 35.0% |
| AACATTCCGTCAATTGGAAG+TGG | + | chr7.4:77462371-77462390 | MS.gene74036:CDS | 40.0% | |
| AACTGCTGTGACAATTACTC+AGG | - | chr7.4:77463015-77463034 | None:intergenic | 40.0% | |
| AAGTGACAACACCATTGCTA+TGG | + | chr7.4:77462646-77462665 | MS.gene74036:CDS | 40.0% | |
| AATGGGTCAGTCATATGGAA+AGG | + | chr7.4:77462790-77462809 | MS.gene74036:CDS | 40.0% | |
| ACCAAAGGAACTTTCGTACT+TGG | + | chr7.4:77463804-77463823 | MS.gene74036:CDS | 40.0% | |
| AGCTTGGTATGATGCTGAAA+AGG | - | chr7.4:77463938-77463957 | None:intergenic | 40.0% | |
| AGTGACAACACCATTGCTAT+GGG | + | chr7.4:77462647-77462666 | MS.gene74036:CDS | 40.0% | |
| ATATTGTACATGGTCAAGGG+AGG | + | chr7.4:77463333-77463352 | MS.gene74036:CDS | 40.0% | |
| CAAAAAGACGGTCAGACAAT+TGG | - | chr7.4:77462313-77462332 | None:intergenic | 40.0% | |
| CAAGACCAGATCCAAAAAGA+CGG | - | chr7.4:77462325-77462344 | None:intergenic | 40.0% | |
| CAAGGAGTCATAAAAGGAAC+TGG | + | chr7.4:77463457-77463476 | MS.gene74036:CDS | 40.0% | |
| CACATCTTCAATAAAGGGGA+AGG | + | chr7.4:77462671-77462690 | MS.gene74036:CDS | 40.0% | |
| CTAGGAACCTCATATTCCAT+GGG | + | chr7.4:77462833-77462852 | MS.gene74036:CDS | 40.0% | |
| CTCTTGAACAACAGCATAGA+CGG | - | chr7.4:77463720-77463739 | None:intergenic | 40.0% | |
| GAATCCACCTTATCATAGGA+AGG | - | chr7.4:77462926-77462945 | None:intergenic | 40.0% | |
| GATGCTATTCAAACTGTGAC+AGG | + | chr7.4:77463770-77463789 | MS.gene74036:CDS | 40.0% | |
| GGGTCACATCTTCAATAAAG+GGG | + | chr7.4:77462667-77462686 | MS.gene74036:CDS | 40.0% | |
| GTGTTCATGTGATATCTGCA+AGG | + | chr7.4:77463486-77463505 | MS.gene74036:CDS | 40.0% | |
| GTTCATGTGATATCTGCAAG+GGG | + | chr7.4:77463488-77463507 | MS.gene74036:CDS | 40.0% | |
| TAGGAACCTCATATTCCATG+GGG | + | chr7.4:77462834-77462853 | MS.gene74036:CDS | 40.0% | |
| TATGCATGAGCACTATTGCT+AGG | - | chr7.4:77463563-77463582 | None:intergenic | 40.0% | |
| TATGGCTCCTTCCTATGATA+AGG | + | chr7.4:77462916-77462935 | MS.gene74036:CDS | 40.0% | |
| TCAGACCCAACGTATAACAA+TGG | + | chr7.4:77462623-77462642 | MS.gene74036:CDS | 40.0% | |
| TCCAAGTACGAAAGTTCCTT+TGG | - | chr7.4:77463808-77463827 | None:intergenic | 40.0% | |
| TCTAGGAACCTCATATTCCA+TGG | + | chr7.4:77462832-77462851 | MS.gene74036:CDS | 40.0% | |
| TCTCCTGATTTACCATAGGT+TGG | - | chr7.4:77462884-77462903 | None:intergenic | 40.0% | |
| TGCAGATATCACATGAACAC+AGG | - | chr7.4:77463486-77463505 | None:intergenic | 40.0% | |
| TTCTCAATGGGAAACCAGTT+CGG | + | chr7.4:77462268-77462287 | MS.gene74036:CDS | 40.0% | |
| TTGATTCACTCAGATCCTTC+TGG | - | chr7.4:77463150-77463169 | None:intergenic | 40.0% | |
| TTGGTATGATGCTGAAAAGG+AGG | - | chr7.4:77463935-77463954 | None:intergenic | 40.0% | |
| ! | AGCAGTTCCATTTCTTTTGG+AGG | + | chr7.4:77463028-77463047 | MS.gene74036:CDS | 40.0% |
| ! | CAATTGTCTGACCGTCTTTT+TGG | + | chr7.4:77462311-77462330 | MS.gene74036:CDS | 40.0% |
| ! | CACAGCAGTTCCATTTCTTT+TGG | + | chr7.4:77463025-77463044 | MS.gene74036:CDS | 40.0% |
| ! | TTGTTGATGGGTCACAATCA+TGG | + | chr7.4:77462701-77462720 | MS.gene74036:CDS | 40.0% |
| !! | GCATGAGAGCATTACATCAA+TGG | + | chr7.4:77462856-77462875 | MS.gene74036:CDS | 40.0% |
| !! | GTGCTATTTACAGGTGGATT+AGG | - | chr7.4:77463175-77463194 | None:intergenic | 40.0% |
| !! | TTTGGAGTGCTATTTACAGG+TGG | - | chr7.4:77463181-77463200 | None:intergenic | 40.0% |
| !!! | GGAAGGGAGTTTTTTGTTGA+TGG | + | chr7.4:77462688-77462707 | MS.gene74036:CDS | 40.0% |
| !!! | TTACTCAGGTTTTGACTCAC+AGG | - | chr7.4:77463001-77463020 | None:intergenic | 40.0% |
| ACATCAATGGGTCCAACCTA+TGG | + | chr7.4:77462869-77462888 | MS.gene74036:CDS | 45.0% | |
| AGAGCTGAAAAACAGTCCTC+AGG | + | chr7.4:77463736-77463755 | MS.gene74036:CDS | 45.0% | |
| ATGAATTTGAGCGTCACGCT+GGG | + | chr7.4:77463645-77463664 | MS.gene74036:CDS | 45.0% | |
| CAAGTCAGAGATTCTGACCA+TGG | + | chr7.4:77462530-77462549 | MS.gene74036:CDS | 45.0% | |
| CAGTGGAGTCATTCAGTTGA+GGG | - | chr7.4:77463066-77463085 | None:intergenic | 45.0% | |
| CTGTCAATGTCTCATTCCAC+AGG | + | chr7.4:77462455-77462474 | MS.gene74036:CDS | 45.0% | |
| GAAGATGTGACCCATAGCAA+TGG | - | chr7.4:77462660-77462679 | None:intergenic | 45.0% | |
| GAAGGGAAGCTGTTAGTAGA+AGG | - | chr7.4:77463262-77463281 | None:intergenic | 45.0% | |
| GGTCCAACCTATGGTAAATC+AGG | + | chr7.4:77462878-77462897 | MS.gene74036:CDS | 45.0% | |
| TATGAATTTGAGCGTCACGC+TGG | + | chr7.4:77463644-77463663 | MS.gene74036:CDS | 45.0% | |
| TCAATGTCTCATTCCACAGG+AGG | + | chr7.4:77462458-77462477 | MS.gene74036:CDS | 45.0% | |
| TCTCAATGGGAAACCAGTTC+GGG | + | chr7.4:77462269-77462288 | MS.gene74036:CDS | 45.0% | |
| TGATATCTGCAAGGGGCAAA+AGG | + | chr7.4:77463495-77463514 | MS.gene74036:CDS | 45.0% | |
| ! | GAGTTCTGGTTGCCCATTAA+CGG | - | chr7.4:77463109-77463128 | None:intergenic | 45.0% |
| ! | TCTGACCGTCTTTTTGGATC+TGG | + | chr7.4:77462317-77462336 | MS.gene74036:CDS | 45.0% |
| !! | CAGTTGAAGGTGTTAGTGAC+AGG | + | chr7.4:77462225-77462244 | MS.gene74036:CDS | 45.0% |
| !! | GCATCAAAAAGCATCTCCTG+AGG | - | chr7.4:77463755-77463774 | None:intergenic | 45.0% |
| AATGGGTCGGTCCTTTGACA+GGG | + | chr7.4:77462748-77462767 | MS.gene74036:CDS | 50.0% | |
| ATTTCCATCGCCCCTGTCAA+AGG | - | chr7.4:77462762-77462781 | None:intergenic | 50.0% | |
| CAACACCTTGAGCTGAGTTC+TGG | - | chr7.4:77463123-77463142 | None:intergenic | 50.0% | |
| CAGACAATTGGCCAGTGACT+GGG | - | chr7.4:77462301-77462320 | None:intergenic | 50.0% | |
| CAGGAGCCACTATCAACCAA+AGG | + | chr7.4:77463789-77463808 | MS.gene74036:CDS | 50.0% | |
| CCAGTGGAGTCATTCAGTTG+AGG | - | chr7.4:77463067-77463086 | None:intergenic | 50.0% | |
| CCTCAACTGAATGACTCCAC+TGG | + | chr7.4:77463064-77463083 | MS.gene74036:CDS | 50.0% | |
| CTCATGCCCCATGGAATATG+AGG | - | chr7.4:77462843-77462862 | None:intergenic | 50.0% | |
| CTTGAGCTTCAGCGCATCTA+TGG | + | chr7.4:77463964-77463983 | MS.gene74036:CDS | 50.0% | |
| GAAGCTCAAGAGTAGCAGCT+TGG | - | chr7.4:77463954-77463973 | None:intergenic | 50.0% | |
| GAGTTGCCGCTGTCAAAAGA+TGG | - | chr7.4:77462968-77462987 | None:intergenic | 50.0% | |
| GATGGGTCACAATCATGGCA+AGG | + | chr7.4:77462706-77462725 | MS.gene74036:CDS | 50.0% | |
| GCTTCAGCGCATCTATGGAA+AGG | + | chr7.4:77463969-77463988 | MS.gene74036:CDS | 50.0% | |
| GGCTCCTTCCTATGATAAGG+TGG | + | chr7.4:77462919-77462938 | MS.gene74036:CDS | 50.0% | |
| TCAGACAATTGGCCAGTGAC+TGG | - | chr7.4:77462302-77462321 | None:intergenic | 50.0% | |
| TGAATTTGAGCGTCACGCTG+GGG | + | chr7.4:77463646-77463665 | MS.gene74036:CDS | 50.0% | |
| TGTAATGCTCTCATGCCCCA+TGG | - | chr7.4:77462852-77462871 | None:intergenic | 50.0% | |
| ! | ATCTGATGCAAGGGTGTGCT+TGG | - | chr7.4:77463857-77463876 | None:intergenic | 50.0% |
| ! | TCTGATGCAAGGGTGTGCTT+GGG | - | chr7.4:77463856-77463875 | None:intergenic | 50.0% |
| !! | TCAAGGTGTTGACAGCCAGA+AGG | + | chr7.4:77463132-77463151 | MS.gene74036:CDS | 50.0% |
| AGATGTTGAAGGGCCTCCTG+TGG | - | chr7.4:77462474-77462493 | None:intergenic | 55.0% | |
| ATGGGTCGGTCCTTTGACAG+GGG | + | chr7.4:77462749-77462768 | MS.gene74036:CDS | 55.0% | |
| CAATGGGTCGGTCCTTTGAC+AGG | + | chr7.4:77462747-77462766 | MS.gene74036:CDS | 55.0% | |
| GAAGGCTTCTTCGCCGTCTT+TGG | - | chr7.4:77463244-77463263 | None:intergenic | 55.0% | |
| GACTGGGTGAAATCCCGAAC+TGG | - | chr7.4:77462285-77462304 | None:intergenic | 55.0% | |
| GGCAACCAGAACTCAGCTCA+AGG | + | chr7.4:77463115-77463134 | MS.gene74036:CDS | 55.0% | |
| TCGGGATTTCACCCAGTCAC+TGG | + | chr7.4:77462287-77462306 | MS.gene74036:CDS | 55.0% | |
| TATCAGCTGCTGGCGTGCCA+TGG | - | chr7.4:77462550-77462569 | None:intergenic | 60.0% | |
| CGGTCCTTTGACAGGGGCGA+TGG | + | chr7.4:77462755-77462774 | MS.gene74036:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 77462203 | 77464008 | 77462203 | ID=MS.gene74036 |
| chr7.4 | mRNA | 77462203 | 77464008 | 77462203 | ID=MS.gene74036.t1;Parent=MS.gene74036 |
| chr7.4 | exon | 77462203 | 77463354 | 77462203 | ID=MS.gene74036.t1.exon1;Parent=MS.gene74036.t1 |
| chr7.4 | CDS | 77462203 | 77463354 | 77462203 | ID=cds.MS.gene74036.t1;Parent=MS.gene74036.t1 |
| chr7.4 | exon | 77463448 | 77463516 | 77463448 | ID=MS.gene74036.t1.exon2;Parent=MS.gene74036.t1 |
| chr7.4 | CDS | 77463448 | 77463516 | 77463448 | ID=cds.MS.gene74036.t1;Parent=MS.gene74036.t1 |
| chr7.4 | exon | 77463632 | 77463830 | 77463632 | ID=MS.gene74036.t1.exon3;Parent=MS.gene74036.t1 |
| chr7.4 | CDS | 77463632 | 77463830 | 77463632 | ID=cds.MS.gene74036.t1;Parent=MS.gene74036.t1 |
| chr7.4 | exon | 77463944 | 77464008 | 77463944 | ID=MS.gene74036.t1.exon4;Parent=MS.gene74036.t1 |
| chr7.4 | CDS | 77463944 | 77464008 | 77463944 | ID=cds.MS.gene74036.t1;Parent=MS.gene74036.t1 |
| Gene Sequence |
| Protein sequence |
