Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74427.t1 | XP_013451415.1 | 95.5 | 222 | 10 | 0 | 1 | 222 | 1 | 222 | 1.40E-115 | 425.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74427.t1 | A0A072UI29 | 95.5 | 222 | 10 | 0 | 1 | 222 | 1 | 222 | 1.0e-115 | 425.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene74427 | 0.825788 | 3.87E-54 | -1.69E-46 |
| MS.gene05045 | MS.gene74427 | 0.80567 | 1.19E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene74427 | 0.82733 | 1.66E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene74427 | 0.84133 | 5.07E-58 | -1.69E-46 |
| MS.gene052611 | MS.gene74427 | 0.823401 | 1.41E-53 | -1.69E-46 |
| MS.gene052612 | MS.gene74427 | 0.800222 | 1.59E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene74427 | 0.816575 | 5.15E-52 | -1.69E-46 |
| MS.gene053998 | MS.gene74427 | 0.814486 | 1.50E-51 | -1.69E-46 |
| MS.gene059154 | MS.gene74427 | 0.811461 | 6.92E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene74427 | 0.815732 | 7.95E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74427.t1 | MTR_6g023885 | 95.495 | 222 | 10 | 0 | 1 | 222 | 1 | 222 | 4.42e-160 | 441 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74427.t1 | AT5G02740 | 44.910 | 167 | 89 | 2 | 58 | 222 | 63 | 228 | 2.59e-49 | 161 |
| MS.gene74427.t1 | AT5G02740 | 44.628 | 121 | 65 | 1 | 58 | 176 | 63 | 183 | 1.57e-35 | 124 |
Find 42 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATACATTACATTGAAAT+TGG | 0.161036 | 6.4:+385513 | None:intergenic |
| GACTCTGGACGATGTTAAAA+TGG | 0.290012 | 6.4:-385556 | MS.gene74427:CDS |
| GAAGGGTCGTTTGTACAAAT+TGG | 0.308196 | 6.4:-384717 | MS.gene74427:CDS |
| CTTCCGTCAATATGTTTCTA+AGG | 0.313232 | 6.4:-383609 | MS.gene74427:intron |
| GGGTAATGAACCCGTTAAAA+TGG | 0.339380 | 6.4:-383492 | MS.gene74427:CDS |
| CTCTTATCAGGTTTGACATA+TGG | 0.371272 | 6.4:-385648 | MS.gene74427:intron |
| AAGCTCACAATATGCAGATT+TGG | 0.381230 | 6.4:-383665 | MS.gene74427:CDS |
| CAACGATACGTTTCCATTCA+AGG | 0.386311 | 6.4:-383469 | MS.gene74427:CDS |
| GAATACATTACATTGAAATT+GGG | 0.406056 | 6.4:+385514 | None:intergenic |
| AATGCATTCATTGCAAAGAA+TGG | 0.414470 | 6.4:-383434 | MS.gene74427:CDS |
| GATATCATCAACTTCCTTGA+AGG | 0.418807 | 6.4:-385588 | MS.gene74427:CDS |
| TCATCGCTTGAATCCTTGAA+TGG | 0.457125 | 6.4:+383456 | None:intergenic |
| AGATGAATCATATTCATAAC+CGG | 0.458720 | 6.4:+383630 | None:intergenic |
| GAGTCAAATTACAACCTTCA+AGG | 0.464292 | 6.4:+385574 | None:intergenic |
| ATGCATTCATTGCAAAGAAT+GGG | 0.484499 | 6.4:-383433 | MS.gene74427:CDS |
| ATGCTATACGCGTGATCGGA+AGG | 0.491267 | 6.4:-384739 | MS.gene74427:CDS |
| GATTTGGATCAGATTGTGTC+CGG | 0.493529 | 6.4:-383649 | MS.gene74427:CDS |
| ATCAGATTGATCGTTCTCAA+TGG | 0.494096 | 6.4:-384582 | MS.gene74427:intron |
| TCAGATTGATCGTTCTCAAT+GGG | 0.498161 | 6.4:-384581 | MS.gene74427:intron |
| GACAATGCTATACGCGTGAT+CGG | 0.498822 | 6.4:-384743 | MS.gene74427:CDS |
| TGAAGGTTGTAATTTGACTC+TGG | 0.499348 | 6.4:-385571 | MS.gene74427:CDS |
| GTCGTTTGTACAAATTGGAT+AGG | 0.503719 | 6.4:-384712 | MS.gene74427:CDS |
| TCTGCATATTGTGAGCTTCG+TGG | 0.510617 | 6.4:+383670 | None:intergenic |
| AGGTTTGACATATGGTAGGC+TGG | 0.513333 | 6.4:-385640 | MS.gene74427:CDS |
| CACGCGTATAGCATTGTCAT+AGG | 0.517638 | 6.4:+384748 | None:intergenic |
| TTGTCATAGGAACTGTAAGT+AGG | 0.528475 | 6.4:+384761 | None:intergenic |
| CTTACAGTTCTTCCGTCGTA+AGG | 0.536989 | 6.4:+384547 | None:intergenic |
| AGTGCATTTCAGAGAAGCAA+TGG | 0.545093 | 6.4:-389913 | MS.gene74427:CDS |
| TTGACATATGGTAGGCTGGT+TGG | 0.546146 | 6.4:-385636 | MS.gene74427:CDS |
| TCGTTTGTACAAATTGGATA+GGG | 0.546525 | 6.4:-384711 | MS.gene74427:intron |
| TGTCATAGGAACTGTAAGTA+GGG | 0.550774 | 6.4:+384762 | None:intergenic |
| TATACGCGTGATCGGAAGGA+AGG | 0.555284 | 6.4:-384735 | MS.gene74427:CDS |
| TATCAGGTTTGACATATGGT+AGG | 0.555665 | 6.4:-385644 | MS.gene74427:intron |
| TTACCTTAGAAACATATTGA+CGG | 0.556431 | 6.4:+383606 | None:intergenic |
| GTTTGTTTCAGAGCTGGAGA+GGG | 0.593720 | 6.4:-383512 | MS.gene74427:intron |
| TGAAGCTGAAAAGCCACCAC+AGG | 0.618962 | 6.4:-389866 | MS.gene74427:CDS |
| GCAGTTGTTGAATCCTGTGG+TGG | 0.622224 | 6.4:+389853 | None:intergenic |
| TGTTTGTTTCAGAGCTGGAG+AGG | 0.627343 | 6.4:-383513 | MS.gene74427:intron |
| GTATCGAAATGCGATTGTTG+AGG | 0.635754 | 6.4:+383402 | None:intergenic |
| ATACGCGTGATCGGAAGGAA+GGG | 0.636421 | 6.4:-384734 | MS.gene74427:CDS |
| GTAGCAGTTGTTGAATCCTG+TGG | 0.646615 | 6.4:+389850 | None:intergenic |
| GACATCGTTACTCCTTACGA+CGG | 0.725283 | 6.4:-384559 | MS.gene74427:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTATATATAAAAAAAAGTT+TGG | + | chr6.4:388352-388371 | None:intergenic | 10.0% |
| !!! | AAAATTCTTTATTTTCTTTA+GGG | - | chr6.4:385525-385544 | MS.gene74427:CDS | 10.0% |
| !!! | AGTATAATTTTACAAATTTA+TGG | - | chr6.4:387461-387480 | MS.gene74427:intron | 10.0% |
| !!! | TTGATTTTTTATATATATGA+TGG | - | chr6.4:389284-389303 | MS.gene74427:intron | 10.0% |
| !!! | TTTAAAATATTTTAGTGATT+TGG | - | chr6.4:383745-383764 | MS.gene74427:intron | 10.0% |
| !! | AAAAAAAAATTGATTAGCAA+AGG | + | chr6.4:388847-388866 | None:intergenic | 15.0% |
| !! | AAAGAGTAAATAATGTTATT+AGG | + | chr6.4:387633-387652 | None:intergenic | 15.0% |
| !! | AATAAAAAATATCTGTGATT+TGG | - | chr6.4:384415-384434 | MS.gene74427:intron | 15.0% |
| !! | ATATTTCAATTACACTAAAT+AGG | + | chr6.4:386436-386455 | None:intergenic | 15.0% |
| !! | ATTAAAAAATCTTTGTGATT+TGG | - | chr6.4:384168-384187 | MS.gene74427:intron | 15.0% |
| !!! | AACACAAAAAATATAGATTT+TGG | + | chr6.4:384790-384809 | None:intergenic | 15.0% |
| !!! | AATTGTTTTAAGAGTTTATT+GGG | - | chr6.4:383639-383658 | MS.gene74427:CDS | 15.0% |
| !!! | AATTTTTCCATATGATTATT+AGG | - | chr6.4:385468-385487 | MS.gene74427:intron | 15.0% |
| !!! | ATAAAAAATCAAAGTATCAT+TGG | + | chr6.4:389276-389295 | None:intergenic | 15.0% |
| !!! | ATTTTAAAATATCTGTGATT+TGG | - | chr6.4:384378-384397 | MS.gene74427:intron | 15.0% |
| !!! | GAAAATTCTTTATTTTCTTT+AGG | - | chr6.4:385524-385543 | MS.gene74427:intron | 15.0% |
| !!! | GATTGTTATTGTTAATATTA+GGG | - | chr6.4:384278-384297 | MS.gene74427:intron | 15.0% |
| !!! | TATTTTCTCTTGTTTTAATT+AGG | - | chr6.4:383835-383854 | MS.gene74427:intron | 15.0% |
| !!! | TTAAACATTTAAAGTATGTT+TGG | - | chr6.4:385567-385586 | MS.gene74427:CDS | 15.0% |
| !!! | TTTTTTATACTCATTATCAT+AGG | - | chr6.4:384972-384991 | MS.gene74427:intron | 15.0% |
| !! | ACACATAAATATTGAAAACA+AGG | - | chr6.4:387555-387574 | MS.gene74427:intron | 20.0% |
| !! | AGAATGAAATATAAGCAAAA+GGG | - | chr6.4:387357-387376 | MS.gene74427:intron | 20.0% |
| !! | CGTAATGAAAAACTAAATAT+CGG | + | chr6.4:388005-388024 | None:intergenic | 20.0% |
| !! | CTGTTAAATAATTCATCAAT+AGG | + | chr6.4:389106-389125 | None:intergenic | 20.0% |
| !! | GAATACATTACATTGAAATT+GGG | + | chr6.4:387838-387857 | None:intergenic | 20.0% |
| !! | TAGAATGAAATATAAGCAAA+AGG | - | chr6.4:387356-387375 | MS.gene74427:intron | 20.0% |
| !! | TATAATCATGAAACAGAAAA+AGG | - | chr6.4:388307-388326 | MS.gene74427:intron | 20.0% |
| !! | TATGTTTGGATTGAATAATT+AGG | - | chr6.4:385581-385600 | MS.gene74427:CDS | 20.0% |
| !! | TCAAAAAAATAGACAAAAGA+CGG | + | chr6.4:387860-387879 | None:intergenic | 20.0% |
| !! | TTAAAATTAGTTGTATGACA+TGG | + | chr6.4:383730-383749 | None:intergenic | 20.0% |
| !! | TTAATATTATTCGTATGACA+TGG | + | chr6.4:384153-384172 | None:intergenic | 20.0% |
| !!! | AAAAATATAGATTTTGGACA+CGG | + | chr6.4:384784-384803 | None:intergenic | 20.0% |
| !!! | AAAATATCTTTGTGATTTTG+TGG | - | chr6.4:383962-383981 | MS.gene74427:intron | 20.0% |
| !!! | AAATCATTGTTGTTAAATAG+CGG | + | chr6.4:389556-389575 | None:intergenic | 20.0% |
| !!! | AGTCAAATTTTTGCTAATAA+GGG | - | chr6.4:389224-389243 | MS.gene74427:intron | 20.0% |
| !!! | ATTATTTTTTCCCTTTCTAT+TGG | + | chr6.4:388689-388708 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCGTTCTTTTCAT+TGG | - | chr6.4:388743-388762 | MS.gene74427:intron | 20.0% |
| !!! | CATATAGTTTTACAAATGTA+TGG | - | chr6.4:387035-387054 | MS.gene74427:intron | 20.0% |
| !!! | CTTTGTATTCCTTTTTTTAA+GGG | - | chr6.4:385089-385108 | MS.gene74427:intron | 20.0% |
| !!! | GAATTGTTTTAAGAGTTTAT+TGG | - | chr6.4:383638-383657 | MS.gene74427:CDS | 20.0% |
| !!! | GGATTGTTATTGTTAATATT+AGG | - | chr6.4:384277-384296 | MS.gene74427:intron | 20.0% |
| !!! | TAATGTCTTTTACTAAATAG+AGG | - | chr6.4:385403-385422 | MS.gene74427:intron | 20.0% |
| !!! | TATTTTCTCTTGTTCTAATT+AGG | - | chr6.4:384044-384063 | MS.gene74427:intron | 20.0% |
| !!! | TCTTTGTATTCCTTTTTTTA+AGG | - | chr6.4:385088-385107 | MS.gene74427:intron | 20.0% |
| !!! | TTAAACCAATAAAGTGTTTT+GGG | + | chr6.4:387314-387333 | None:intergenic | 20.0% |
| !!! | TTTAAACCAATAAAGTGTTT+TGG | + | chr6.4:387315-387334 | None:intergenic | 20.0% |
| ! | AAAAATTGATTAGCAAAGGT+AGG | + | chr6.4:388843-388862 | None:intergenic | 25.0% |
| ! | AAAGTAAAGGATCTATTCTA+AGG | + | chr6.4:384901-384920 | None:intergenic | 25.0% |
| ! | AAATATTGATCACCAATTGT+TGG | - | chr6.4:386511-386530 | MS.gene74427:intron | 25.0% |
| ! | AAATGTATGGCATTTATCTA+CGG | - | chr6.4:387048-387067 | MS.gene74427:intron | 25.0% |
| ! | AATATTGATCACCAATTGTT+GGG | - | chr6.4:386512-386531 | MS.gene74427:intron | 25.0% |
| ! | ACACACATGATAATAAACTA+TGG | - | chr6.4:389141-389160 | MS.gene74427:intron | 25.0% |
| ! | AGAAAAAACACAGAAAATAG+AGG | - | chr6.4:386689-386708 | MS.gene74427:intron | 25.0% |
| ! | AGATGAATCATATTCATAAC+CGG | + | chr6.4:389722-389741 | None:intergenic | 25.0% |
| ! | AGTTGAAAAATTGATGTATG+TGG | - | chr6.4:387382-387401 | MS.gene74427:intron | 25.0% |
| ! | ATAAATTCTGCTACACTATA+GGG | - | chr6.4:388090-388109 | MS.gene74427:intron | 25.0% |
| ! | ATAATTAGGAGGAAAAAGAT+CGG | - | chr6.4:385595-385614 | MS.gene74427:CDS | 25.0% |
| ! | ATACAAACAAATCCACAAAA+AGG | + | chr6.4:383560-383579 | None:intergenic | 25.0% |
| ! | ATACAACAGCAATGATTTAA+AGG | + | chr6.4:386313-386332 | None:intergenic | 25.0% |
| ! | ATCATCATCATTATCATTGT+TGG | - | chr6.4:387236-387255 | MS.gene74427:intron | 25.0% |
| ! | ATGATTATACCTCAGTAATT+GGG | + | chr6.4:388296-388315 | None:intergenic | 25.0% |
| ! | ATGTTAGCTCAAAAACTAAA+AGG | + | chr6.4:384602-384621 | None:intergenic | 25.0% |
| ! | ATTCACATAACATAACATCA+TGG | + | chr6.4:386068-386087 | None:intergenic | 25.0% |
| ! | CGTAAATAAGATTATGTATG+TGG | - | chr6.4:385246-385265 | MS.gene74427:intron | 25.0% |
| ! | CTAAAAAACAGAGAAAAAAG+AGG | - | chr6.4:386730-386749 | MS.gene74427:intron | 25.0% |
| ! | CTAAGATAAGACAAATTTAG+CGG | + | chr6.4:388509-388528 | None:intergenic | 25.0% |
| ! | CTATTTGTCTCAAAAAGTAA+AGG | + | chr6.4:384914-384933 | None:intergenic | 25.0% |
| ! | GAATAACTTAAGAAAGACTT+AGG | + | chr6.4:386374-386393 | None:intergenic | 25.0% |
| ! | GAATGAAATATAAGCAAAAG+GGG | - | chr6.4:387358-387377 | MS.gene74427:intron | 25.0% |
| ! | GCAAATTTATGGTTTCTTAT+TGG | + | chr6.4:383922-383941 | None:intergenic | 25.0% |
| ! | GGAATACATTACATTGAAAT+TGG | + | chr6.4:387839-387858 | None:intergenic | 25.0% |
| ! | GTCTTAGAATTATGTATGTA+AGG | - | chr6.4:385034-385053 | MS.gene74427:intron | 25.0% |
| ! | TAAAACCCAAAACACTTTAT+TGG | - | chr6.4:387306-387325 | MS.gene74427:intron | 25.0% |
| ! | TAAAACCTAAAGCAATTTAG+TGG | - | chr6.4:386996-387015 | MS.gene74427:intron | 25.0% |
| ! | TACAAACAAATCCACAAAAA+GGG | + | chr6.4:383559-383578 | None:intergenic | 25.0% |
| ! | TATAAATTCTGCTACACTAT+AGG | - | chr6.4:388089-388108 | MS.gene74427:intron | 25.0% |
| ! | TATTGAGAAAATTGCACTTA+CGG | - | chr6.4:384081-384100 | MS.gene74427:intron | 25.0% |
| ! | TCATTAATGAGAAATGCAAA+TGG | - | chr6.4:388262-388281 | MS.gene74427:intron | 25.0% |
| ! | TCTTCTCCTAAAAATATGTA+AGG | + | chr6.4:386265-386284 | None:intergenic | 25.0% |
| ! | TGATTTGAACTAGCAATATT+CGG | + | chr6.4:389362-389381 | None:intergenic | 25.0% |
| ! | TGCATTAAACAAGATCATAT+AGG | + | chr6.4:389584-389603 | None:intergenic | 25.0% |
| ! | TGCTTATATTTCATTCTAGA+GGG | + | chr6.4:387354-387373 | None:intergenic | 25.0% |
| ! | TGTTAGCTCAAAAACTAAAA+GGG | + | chr6.4:384601-384620 | None:intergenic | 25.0% |
| ! | TTAAAATTAGTTGTACAGCA+TGG | + | chr6.4:384365-384384 | None:intergenic | 25.0% |
| ! | TTAAGCTATTTATCCAAACA+AGG | - | chr6.4:386348-386367 | MS.gene74427:intron | 25.0% |
| ! | TTACCTTAGAAACATATTGA+CGG | + | chr6.4:389746-389765 | None:intergenic | 25.0% |
| ! | TTGCTTATATTTCATTCTAG+AGG | + | chr6.4:387355-387374 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | chr6.4:388983-389002 | MS.gene74427:intron | 25.0% |
| ! | TTTCACAAAAACCATATGAT+CGG | - | chr6.4:388025-388044 | MS.gene74427:intron | 25.0% |
| !! | AAAAAATATCTGTGATTTGG+TGG | - | chr6.4:384418-384437 | MS.gene74427:intron | 25.0% |
| !! | AAAAAATCTTTGTGATTTGG+TGG | - | chr6.4:384171-384190 | MS.gene74427:intron | 25.0% |
| !! | AGGATTGTTATTGTTGATAT+TGG | - | chr6.4:384519-384538 | MS.gene74427:intron | 25.0% |
| !! | GAGTCAAATTTTTGCTAATA+AGG | - | chr6.4:389223-389242 | MS.gene74427:intron | 25.0% |
| !! | GATTGTTATTGTTGATATTG+GGG | - | chr6.4:384521-384540 | MS.gene74427:intron | 25.0% |
| !! | GGATTGTTATTGTTGATATT+GGG | - | chr6.4:384520-384539 | MS.gene74427:intron | 25.0% |
| !! | GTAAAACTATTTTACACTGA+CGG | - | chr6.4:384012-384031 | MS.gene74427:intron | 25.0% |
| !! | GTAAAACTATTTTACACTGA+TGG | - | chr6.4:384012-384031 | MS.gene74427:intron | 25.0% |
| !! | TATGAATTTTGTACAATCCT+AGG | - | chr6.4:386172-386191 | MS.gene74427:intron | 25.0% |
| !! | TGAAAGTTATGTTGGATTTT+TGG | - | chr6.4:383599-383618 | MS.gene74427:intron | 25.0% |
| !! | TGATAATGACCCTTAAAAAA+AGG | + | chr6.4:385101-385120 | None:intergenic | 25.0% |
| !! | TTGTTTCTTTCAAAGATCTT+TGG | - | chr6.4:387958-387977 | MS.gene74427:intron | 25.0% |
| !! | TTTGATTTAAATAGAACACC+TGG | - | chr6.4:386486-386505 | MS.gene74427:intron | 25.0% |
| !! | TTTTCCATATGATTATTAGG+AGG | - | chr6.4:385471-385490 | MS.gene74427:intron | 25.0% |
| !!! | AACTATCATTTTTATTCCAG+AGG | - | chr6.4:387437-387456 | MS.gene74427:intron | 25.0% |
| !!! | ACATGTGAATTTTGAAAACA+AGG | - | chr6.4:387117-387136 | MS.gene74427:intron | 25.0% |
| !!! | ACTATCATTTTTATTCCAGA+GGG | - | chr6.4:387438-387457 | MS.gene74427:intron | 25.0% |
| !!! | AGGCTTGTTATTGTTAATAT+TGG | - | chr6.4:383855-383874 | MS.gene74427:intron | 25.0% |
| !!! | ATACACAATTTCACTGATTT+AGG | + | chr6.4:385738-385757 | None:intergenic | 25.0% |
| !!! | ATTTTTGGCTTAGTTTTTGT+AGG | - | chr6.4:383614-383633 | MS.gene74427:CDS | 25.0% |
| !!! | GATTGTCTCTTGTTTTAATT+AGG | - | chr6.4:384256-384275 | MS.gene74427:intron | 25.0% |
| !!! | GGCTTGTTATTGTTAATATT+GGG | - | chr6.4:383856-383875 | MS.gene74427:intron | 25.0% |
| !!! | GTCTTTTGTCTATTTTTTTG+AGG | - | chr6.4:387859-387878 | MS.gene74427:intron | 25.0% |
| !!! | TACATACATAATTCTAAGAC+AGG | + | chr6.4:385034-385053 | None:intergenic | 25.0% |
| !!! | TTGTTAAATAGCGGATATAT+TGG | + | chr6.4:389547-389566 | None:intergenic | 25.0% |
| !!! | TTTTGCCAGATTTTAATTGA+AGG | - | chr6.4:389652-389671 | MS.gene74427:intron | 25.0% |
| !!! | TTTTTCTCTGTTTTTTAGCT+TGG | + | chr6.4:386728-386747 | None:intergenic | 25.0% |
| AAAAAAGATGCCATTCACTT+AGG | + | chr6.4:387940-387959 | None:intergenic | 30.0% | |
| AAATACCAACAATTGTAGTC+AGG | + | chr6.4:386928-386947 | None:intergenic | 30.0% | |
| AACAATTCGCTCAACAAATA+AGG | + | chr6.4:384637-384656 | None:intergenic | 30.0% | |
| AATGCATTCATTGCAAAGAA+TGG | - | chr6.4:389915-389934 | MS.gene74427:CDS | 30.0% | |
| AATTGCATTAATCATCCGTT+AGG | + | chr6.4:385452-385471 | None:intergenic | 30.0% | |
| ACAATTCGCTCAACAAATAA+GGG | + | chr6.4:384636-384655 | None:intergenic | 30.0% | |
| AGAAAAAAGAGGAAAAACAG+AGG | - | chr6.4:386741-386760 | MS.gene74427:intron | 30.0% | |
| AGAAAATAGAGGAAAAACAG+AGG | - | chr6.4:386700-386719 | MS.gene74427:intron | 30.0% | |
| ATATTGATCACCAATTGTTG+GGG | - | chr6.4:386513-386532 | MS.gene74427:intron | 30.0% | |
| ATGCATTCATTGCAAAGAAT+GGG | - | chr6.4:389916-389935 | MS.gene74427:CDS | 30.0% | |
| ATTTGACAACACTGAATACA+GGG | - | chr6.4:388235-388254 | MS.gene74427:intron | 30.0% | |
| CATGATTATACCTCAGTAAT+TGG | + | chr6.4:388297-388316 | None:intergenic | 30.0% | |
| CCTAAAAATATGTAAGGTGT+AGG | + | chr6.4:386259-386278 | None:intergenic | 30.0% | |
| CCTTGTATTTCTCCAATATA+GGG | - | chr6.4:385356-385375 | MS.gene74427:intron | 30.0% | |
| GAAGTCCTTCAATTAAAATC+TGG | + | chr6.4:389660-389679 | None:intergenic | 30.0% | |
| GAATTGGTTGTATCCAAAAA+AGG | + | chr6.4:383529-383548 | None:intergenic | 30.0% | |
| GATAAAAGATCGTAAACATG+AGG | - | chr6.4:386614-386633 | MS.gene74427:intron | 30.0% | |
| GCATATAAAATAGCATACGT+AGG | + | chr6.4:386138-386157 | None:intergenic | 30.0% | |
| GGAGAAAAGTTATTCTTTGA+TGG | - | chr6.4:389059-389078 | MS.gene74427:intron | 30.0% | |
| GTAGATTGAAGGTTTCTTAT+TGG | + | chr6.4:384343-384362 | None:intergenic | 30.0% | |
| GTTTGGATTGAATAATTAGG+AGG | - | chr6.4:385584-385603 | MS.gene74427:CDS | 30.0% | |
| TAATTAGGAGGAAAAAGATC+GGG | - | chr6.4:385596-385615 | MS.gene74427:CDS | 30.0% | |
| TATTTGACAACACTGAATAC+AGG | - | chr6.4:388234-388253 | MS.gene74427:intron | 30.0% | |
| TCAAACCACTAAATTGCTTT+AGG | + | chr6.4:387004-387023 | None:intergenic | 30.0% | |
| TCCTTGTATTTCTCCAATAT+AGG | - | chr6.4:385355-385374 | MS.gene74427:intron | 30.0% | |
| TCGTTTGTACAAATTGGATA+GGG | - | chr6.4:388638-388657 | MS.gene74427:intron | 30.0% | |
| TCTTCCTCCTAATAATCATA+TGG | + | chr6.4:385478-385497 | None:intergenic | 30.0% | |
| TGTATGACATGGCAAATTTA+TGG | + | chr6.4:383933-383952 | None:intergenic | 30.0% | |
| TTATTAAAATTCCCGTAAGC+AGG | - | chr6.4:389498-389517 | MS.gene74427:intron | 30.0% | |
| TTGTAAAATTATACTCCCTC+TGG | + | chr6.4:387456-387475 | None:intergenic | 30.0% | |
| TTTCTATTATCCCCAACAAT+TGG | + | chr6.4:386526-386545 | None:intergenic | 30.0% | |
| ! | AACTTTTCTCCTATGAAACA+CGG | + | chr6.4:389050-389069 | None:intergenic | 30.0% |
| ! | ATCGTGGATTTTACGATTAA+CGG | + | chr6.4:385769-385788 | None:intergenic | 30.0% |
| ! | CAACAATGATAATGATAGTG+AGG | + | chr6.4:386551-386570 | None:intergenic | 30.0% |
| ! | CATTTTCCAAGTGAAAACAA+AGG | + | chr6.4:388719-388738 | None:intergenic | 30.0% |
| ! | CCTACACCTTACATATTTTT+AGG | - | chr6.4:386256-386275 | MS.gene74427:intron | 30.0% |
| ! | GCTTGATTTGAAAGTTATGT+TGG | - | chr6.4:383591-383610 | MS.gene74427:intron | 30.0% |
| ! | TGATTTGCATTATCATCAGA+AGG | - | chr6.4:385148-385167 | MS.gene74427:intron | 30.0% |
| ! | TGTCATTTATGCATACCTAA+CGG | - | chr6.4:385434-385453 | MS.gene74427:intron | 30.0% |
| ! | TGTTTTCTCATTCTCTTATC+AGG | - | chr6.4:387689-387708 | MS.gene74427:intron | 30.0% |
| ! | TTACAATTCTCTGAAGATGA+TGG | - | chr6.4:389808-389827 | MS.gene74427:intron | 30.0% |
| ! | TTGGTGATCAATATTTATCC+AGG | + | chr6.4:386507-386526 | None:intergenic | 30.0% |
| ! | TTTTTGGATACAACCAATTC+AGG | - | chr6.4:383529-383548 | MS.gene74427:intron | 30.0% |
| !! | ATAATTCTAAGACAGGAAGA+TGG | + | chr6.4:385027-385046 | None:intergenic | 30.0% |
| !! | ATTTCACTGATTTAGGATTC+TGG | + | chr6.4:385731-385750 | None:intergenic | 30.0% |
| !! | TATATGATGGACTAAGATTG+TGG | - | chr6.4:389297-389316 | MS.gene74427:intron | 30.0% |
| !! | TTGAAGTTTTTGCTATCATC+AGG | - | chr6.4:388553-388572 | MS.gene74427:intron | 30.0% |
| !! | TTTCACTGATTTAGGATTCT+GGG | + | chr6.4:385730-385749 | None:intergenic | 30.0% |
| !!! | AGTGTTTTGGGTTTTACATT+TGG | + | chr6.4:387302-387321 | None:intergenic | 30.0% |
| !!! | TTTCTTCCTTTGTTTTCACT+TGG | - | chr6.4:388710-388729 | MS.gene74427:intron | 30.0% |
| AAACTGATCGATCCTACTTA+CGG | + | chr6.4:386653-386672 | None:intergenic | 35.0% | |
| AAATATCTGACCAATAGCAG+GGG | + | chr6.4:384862-384881 | None:intergenic | 35.0% | |
| AAATATGTAAGGTGTAGGAG+AGG | + | chr6.4:386254-386273 | None:intergenic | 35.0% | |
| AACGTTAATCGCAAAATCGT+AGG | + | chr6.4:385685-385704 | None:intergenic | 35.0% | |
| AAGAGAAAAGCTATGAAGCA+CGG | - | chr6.4:388869-388888 | MS.gene74427:intron | 35.0% | |
| AAGCTCACAATATGCAGATT+TGG | - | chr6.4:389684-389703 | MS.gene74427:intron | 35.0% | |
| AATCGTAAAATCCACGATCT+TGG | - | chr6.4:385771-385790 | MS.gene74427:intron | 35.0% | |
| ACCTAGTCATTGCTATCTAT+TGG | - | chr6.4:387596-387615 | MS.gene74427:intron | 35.0% | |
| AGAAATATCTGACCAATAGC+AGG | + | chr6.4:384864-384883 | None:intergenic | 35.0% | |
| AGAATCGTTACACAAATCCT+AGG | + | chr6.4:386192-386211 | None:intergenic | 35.0% | |
| AGGAAAAACAGAGTAAACAG+AGG | - | chr6.4:386782-386801 | MS.gene74427:intron | 35.0% | |
| ATACCTCTTGCCAATAGAAA+GGG | - | chr6.4:388676-388695 | MS.gene74427:intron | 35.0% | |
| ATATTAGGGAAATTGCACTG+AGG | - | chr6.4:384292-384311 | MS.gene74427:intron | 35.0% | |
| ATCAGATTGATCGTTCTCAA+TGG | - | chr6.4:388767-388786 | MS.gene74427:intron | 35.0% | |
| ATGGATCAGTTTCAAATCGT+GGG | - | chr6.4:385859-385878 | MS.gene74427:intron | 35.0% | |
| CCATGCTATGACTATCAAAA+TGG | + | chr6.4:387885-387904 | None:intergenic | 35.0% | |
| CCCTATATTGGAGAAATACA+AGG | + | chr6.4:385359-385378 | None:intergenic | 35.0% | |
| CTACGCATTGTAGTCAAAAT+GGG | - | chr6.4:385642-385661 | MS.gene74427:intron | 35.0% | |
| CTAGTTTAAGTGCATCATGT+TGG | - | chr6.4:385966-385985 | MS.gene74427:intron | 35.0% | |
| CTCTTATCAGGTTTGACATA+TGG | - | chr6.4:387701-387720 | MS.gene74427:intron | 35.0% | |
| GAAATATCTGACCAATAGCA+GGG | + | chr6.4:384863-384882 | None:intergenic | 35.0% | |
| GAGTCAAATTACAACCTTCA+AGG | + | chr6.4:387778-387797 | None:intergenic | 35.0% | |
| GATATCATCAACTTCCTTGA+AGG | - | chr6.4:387761-387780 | MS.gene74427:intron | 35.0% | |
| GCATTTATTGCCTAAGTGAA+TGG | - | chr6.4:387927-387946 | MS.gene74427:intron | 35.0% | |
| GCTATTGGTCAGATATTTCT+TGG | - | chr6.4:384864-384883 | MS.gene74427:intron | 35.0% | |
| GTAAAGTTAAAGCACGATTG+AGG | - | chr6.4:386856-386875 | MS.gene74427:intron | 35.0% | |
| GTCACTGCTATCTATTAACA+AGG | - | chr6.4:387163-387182 | MS.gene74427:intron | 35.0% | |
| GTCGTTTGTACAAATTGGAT+AGG | - | chr6.4:388637-388656 | MS.gene74427:intron | 35.0% | |
| GTCTTACGAGTTACTAAAAC+AGG | + | chr6.4:385925-385944 | None:intergenic | 35.0% | |
| GTGGAATACAAGATGTTCAT+TGG | - | chr6.4:383981-384000 | MS.gene74427:intron | 35.0% | |
| TACCTCAGTAATTGGGAATT+AGG | + | chr6.4:388289-388308 | None:intergenic | 35.0% | |
| TACGCATTGTAGTCAAAATG+GGG | - | chr6.4:385643-385662 | MS.gene74427:intron | 35.0% | |
| TAGCTCAAAAACTAAAAGGG+TGG | + | chr6.4:384598-384617 | None:intergenic | 35.0% | |
| TAGTAACTCGTAAGACTTTC+TGG | - | chr6.4:385929-385948 | MS.gene74427:intron | 35.0% | |
| TATACCTCTTGCCAATAGAA+AGG | - | chr6.4:388675-388694 | MS.gene74427:intron | 35.0% | |
| TATCAGGTTTGACATATGGT+AGG | - | chr6.4:387705-387724 | MS.gene74427:intron | 35.0% | |
| TATGCGTGTGCATTTACATT+TGG | - | chr6.4:387083-387102 | MS.gene74427:intron | 35.0% | |
| TATTAGGGAAATTGCACTGA+GGG | - | chr6.4:384293-384312 | MS.gene74427:intron | 35.0% | |
| TATTGGGAAAATTGCACTGA+CGG | - | chr6.4:383872-383891 | MS.gene74427:intron | 35.0% | |
| TCACAAGTGCTTAAGTCAAT+AGG | - | chr6.4:388456-388475 | MS.gene74427:intron | 35.0% | |
| TCACAGATTGCTGAAAATAG+CGG | - | chr6.4:389392-389411 | MS.gene74427:intron | 35.0% | |
| TCAGATTGATCGTTCTCAAT+GGG | - | chr6.4:388768-388787 | MS.gene74427:intron | 35.0% | |
| TGAAGGTTGTAATTTGACTC+TGG | - | chr6.4:387778-387797 | MS.gene74427:intron | 35.0% | |
| TGTCATAGGAACTGTAAGTA+GGG | + | chr6.4:388590-388609 | None:intergenic | 35.0% | |
| TTAAGCACTTGTGACTGTTT+GGG | + | chr6.4:388450-388469 | None:intergenic | 35.0% | |
| TTGGTTGTATCCAAAAAAGG+AGG | + | chr6.4:383526-383545 | None:intergenic | 35.0% | |
| TTGTCAAATAACGACTACAG+CGG | + | chr6.4:388224-388243 | None:intergenic | 35.0% | |
| TTGTCATAGGAACTGTAAGT+AGG | + | chr6.4:388591-388610 | None:intergenic | 35.0% | |
| ! | AGGTGTTCTCTCTTTAGTTT+AGG | - | chr6.4:387183-387202 | MS.gene74427:intron | 35.0% |
| ! | ATCGTGCTTTAACTTTACTC+AGG | + | chr6.4:386854-386873 | None:intergenic | 35.0% |
| ! | ATTCAGGTATACCCTTTTTG+TGG | - | chr6.4:383545-383564 | MS.gene74427:intron | 35.0% |
| ! | CAAAAAGGGTATACCTGAAT+TGG | + | chr6.4:383545-383564 | None:intergenic | 35.0% |
| ! | CCATTGATTGGGAAAATCAA+TGG | + | chr6.4:389185-389204 | None:intergenic | 35.0% |
| ! | CTTCCGTCAATATGTTTCTA+AGG | - | chr6.4:389740-389759 | MS.gene74427:intron | 35.0% |
| ! | TACTTTGTTTGTTTCAGAGC+TGG | - | chr6.4:389831-389850 | MS.gene74427:CDS | 35.0% |
| ! | TGTAATTACAAGTGTCGTGT+CGG | + | chr6.4:388947-388966 | None:intergenic | 35.0% |
| !! | AGTTTTTGCTATCATCAGGA+TGG | - | chr6.4:388557-388576 | MS.gene74427:intron | 35.0% |
| !! | CCATTTTGATAGTCATAGCA+TGG | - | chr6.4:387882-387901 | MS.gene74427:intron | 35.0% |
| !! | TCATTGCTATCTATTGGCTT+TGG | - | chr6.4:387602-387621 | MS.gene74427:intron | 35.0% |
| !! | TGATGGTATTGGTGTCTTAT+TGG | + | chr6.4:383702-383721 | None:intergenic | 35.0% |
| !! | TTTTGATAGTCATAGCATGG+TGG | - | chr6.4:387885-387904 | MS.gene74427:intron | 35.0% |
| !!! | ACGTATCGTTGCCATTTTAA+CGG | + | chr6.4:389871-389890 | None:intergenic | 35.0% |
| !!! | CAGGTTCGAGTTTTTAAGTA+GGG | - | chr6.4:386581-386600 | MS.gene74427:intron | 35.0% |
| !!! | CCATTGATTTTCCCAATCAA+TGG | - | chr6.4:389182-389201 | MS.gene74427:intron | 35.0% |
| !!! | GTTTAGGTTGTTTTCATGCA+AGG | - | chr6.4:387199-387218 | MS.gene74427:intron | 35.0% |
| !!! | TCAGGTTCGAGTTTTTAAGT+AGG | - | chr6.4:386580-386599 | MS.gene74427:intron | 35.0% |
| !!! | TTCGAGTTTTTAAGTAGGGT+CGG | - | chr6.4:386585-386604 | MS.gene74427:intron | 35.0% |
| AAACTCGAACCTGACTACAT+TGG | + | chr6.4:386574-386593 | None:intergenic | 40.0% | |
| AACACCGAACAGATGAAAAC+AGG | - | chr6.4:386817-386836 | MS.gene74427:intron | 40.0% | |
| AACACCTGTTAGAAACGTCT+TGG | - | chr6.4:384812-384831 | MS.gene74427:intron | 40.0% | |
| AACGAGGAATAGCCATTGAT+TGG | + | chr6.4:389197-389216 | None:intergenic | 40.0% | |
| AAGTATAGCCTATACGACAC+TGG | + | chr6.4:385280-385299 | None:intergenic | 40.0% | |
| AATAGGACACTGCTACGTAT+TGG | + | chr6.4:386419-386438 | None:intergenic | 40.0% | |
| ACAACAAAGCTCCGATCATA+TGG | + | chr6.4:388039-388058 | None:intergenic | 40.0% | |
| ACACCGAACAGATGAAAACA+GGG | - | chr6.4:386818-386837 | MS.gene74427:intron | 40.0% | |
| AGAAACCCGTTTCAGTAACT+CGG | - | chr6.4:385886-385905 | MS.gene74427:intron | 40.0% | |
| AGACAAATTTAGCGGCTGTT+TGG | + | chr6.4:388501-388520 | None:intergenic | 40.0% | |
| AGAGGTAGTCAAAATCCGTA+AGG | + | chr6.4:386236-386255 | None:intergenic | 40.0% | |
| AGTGCATTTCAGAGAAGCAA+TGG | - | chr6.4:383436-383455 | MS.gene74427:CDS | 40.0% | |
| ATTCGCTCAACAAATAAGGG+TGG | + | chr6.4:384633-384652 | None:intergenic | 40.0% | |
| CAACGATACGTTTCCATTCA+AGG | - | chr6.4:389880-389899 | MS.gene74427:CDS | 40.0% | |
| CCTACGCATTGTAGTCAAAA+TGG | - | chr6.4:385641-385660 | MS.gene74427:CDS | 40.0% | |
| CGAGTGACAACTAAATGCTA+AGG | + | chr6.4:386396-386415 | None:intergenic | 40.0% | |
| CGTTACAGTGCTATAGCTAT+AGG | - | chr6.4:389433-389452 | MS.gene74427:intron | 40.0% | |
| CTCCAATATAGGGAAGAATG+CGG | - | chr6.4:385366-385385 | MS.gene74427:intron | 40.0% | |
| CTTAAGCACTTGTGACTGTT+TGG | + | chr6.4:388451-388470 | None:intergenic | 40.0% | |
| GAAGGGTCGTTTGTACAAAT+TGG | - | chr6.4:388632-388651 | MS.gene74427:intron | 40.0% | |
| GACTCTGGACGATGTTAAAA+TGG | - | chr6.4:387793-387812 | MS.gene74427:intron | 40.0% | |
| GATGGATCAGTTTCAAATCG+TGG | - | chr6.4:385858-385877 | MS.gene74427:intron | 40.0% | |
| GATTTGGATCAGATTGTGTC+CGG | - | chr6.4:389700-389719 | MS.gene74427:intron | 40.0% | |
| GCATCAGAAGTGATTCATCT+TGG | - | chr6.4:385065-385084 | MS.gene74427:intron | 40.0% | |
| GCCAATAGATAGCAATGACT+AGG | + | chr6.4:387600-387619 | None:intergenic | 40.0% | |
| GGAAACAAGCAAACACATAG+AGG | - | chr6.4:386762-386781 | MS.gene74427:intron | 40.0% | |
| GGGTAATGAACCCGTTAAAA+TGG | - | chr6.4:389857-389876 | MS.gene74427:CDS | 40.0% | |
| GGTATAGTCATGATCCTTCA+AGG | + | chr6.4:385709-385728 | None:intergenic | 40.0% | |
| GGTGGAATAAAGATGCTCAT+TGG | - | chr6.4:384436-384455 | MS.gene74427:intron | 40.0% | |
| GTATCGAAATGCGATTGTTG+AGG | + | chr6.4:389950-389969 | None:intergenic | 40.0% | |
| GTATGCGTGAATAGACATAC+TGG | + | chr6.4:387277-387296 | None:intergenic | 40.0% | |
| GTCCTAATTCCCAATTACTG+AGG | - | chr6.4:388284-388303 | MS.gene74427:intron | 40.0% | |
| GTGTCGTATAGGCTATACTT+TGG | - | chr6.4:385280-385299 | MS.gene74427:intron | 40.0% | |
| GTTTATTGGGCATGCAATGA+TGG | - | chr6.4:383652-383671 | MS.gene74427:CDS | 40.0% | |
| TAAAATCCACGATCTTGGAG+TGG | - | chr6.4:385776-385795 | MS.gene74427:intron | 40.0% | |
| TAGTCAAAATCCGTAAGGAG+AGG | + | chr6.4:386231-386250 | None:intergenic | 40.0% | |
| TCATCGCTTGAATCCTTGAA+TGG | + | chr6.4:389896-389915 | None:intergenic | 40.0% | |
| TCATTGTTGCCAATGTAGTC+AGG | - | chr6.4:386562-386581 | MS.gene74427:intron | 40.0% | |
| TCGATCCTGACTACAATTGT+TGG | - | chr6.4:386920-386939 | MS.gene74427:intron | 40.0% | |
| TCTCCTATGAAACACGGATA+CGG | + | chr6.4:389044-389063 | None:intergenic | 40.0% | |
| TGACTGTTTGGGAGAACTTA+TGG | + | chr6.4:388439-388458 | None:intergenic | 40.0% | |
| TGTACAGCATGGTAGATTGA+AGG | + | chr6.4:384354-384373 | None:intergenic | 40.0% | |
| TGTATGACATGGCAGATTGA+TGG | + | chr6.4:383719-383738 | None:intergenic | 40.0% | |
| TTCCGCATTCTTCCCTATAT+TGG | + | chr6.4:385371-385390 | None:intergenic | 40.0% | |
| TTTCCCTTTCTATTGGCAAG+AGG | + | chr6.4:388682-388701 | None:intergenic | 40.0% | |
| ! | ACATGGCAGATTGATGGTAT+TGG | + | chr6.4:383713-383732 | None:intergenic | 40.0% |
| ! | ACGAGGAATAGCCATTGATT+GGG | + | chr6.4:389196-389215 | None:intergenic | 40.0% |
| ! | ATTGCACTGACGGTGTAAAA+TGG | - | chr6.4:383882-383901 | MS.gene74427:intron | 40.0% |
| ! | TTGCCCTGTTTTCATCTGTT+CGG | + | chr6.4:386824-386843 | None:intergenic | 40.0% |
| ! | TTGTTGTCAATCGCGGATTA+CGG | - | chr6.4:388052-388071 | MS.gene74427:intron | 40.0% |
| !! | AATTTGACTCCTCTGAAACG+AGG | + | chr6.4:389213-389232 | None:intergenic | 40.0% |
| !! | AGAAAGACTTAGGCCTTGTT+TGG | + | chr6.4:386364-386383 | None:intergenic | 40.0% |
| !! | TCAGAGAAGCAATGGTTTTG+TGG | - | chr6.4:383444-383463 | MS.gene74427:CDS | 40.0% |
| !!! | AACTGCTACACCTCCTTTTT+TGG | - | chr6.4:383513-383532 | MS.gene74427:intron | 40.0% |
| !!! | AGTTTTTAAGTAGGGTCGGT+AGG | - | chr6.4:386589-386608 | MS.gene74427:intron | 40.0% |
| !!! | CCATTTTGACTACAATGCGT+AGG | + | chr6.4:385644-385663 | None:intergenic | 40.0% |
| !!! | CGTATCGTTGCCATTTTAAC+GGG | + | chr6.4:389870-389889 | None:intergenic | 40.0% |
| AGGAGGAAAAAGATCGGGTT+TGG | - | chr6.4:385601-385620 | MS.gene74427:CDS | 45.0% | |
| AGGTTTGACATATGGTAGGC+TGG | - | chr6.4:387709-387728 | MS.gene74427:intron | 45.0% | |
| ATGAAACACGGATACGGACA+CGG | + | chr6.4:389038-389057 | None:intergenic | 45.0% | |
| ATGGCTATTCCTCGTTTCAG+AGG | - | chr6.4:389201-389220 | MS.gene74427:intron | 45.0% | |
| CACGCGTATAGCATTGTCAT+AGG | + | chr6.4:388604-388623 | None:intergenic | 45.0% | |
| CGCTATAGCATACCTGCTTA+CGG | + | chr6.4:389513-389532 | None:intergenic | 45.0% | |
| CGTATGACATGGCAGATTGA+TGG | + | chr6.4:384142-384161 | None:intergenic | 45.0% | |
| CTTACAGTTCTTCCGTCGTA+AGG | + | chr6.4:388805-388824 | None:intergenic | 45.0% | |
| CTTGACCCGAGTTACTGAAA+CGG | + | chr6.4:385895-385914 | None:intergenic | 45.0% | |
| GAAACCCGTTTCAGTAACTC+GGG | - | chr6.4:385887-385906 | MS.gene74427:intron | 45.0% | |
| GACAATGCTATACGCGTGAT+CGG | - | chr6.4:388606-388625 | MS.gene74427:intron | 45.0% | |
| GACATCGTTACTCCTTACGA+CGG | - | chr6.4:388790-388809 | MS.gene74427:intron | 45.0% | |
| GCATCCAAGACGTTTCTAAC+AGG | + | chr6.4:384819-384838 | None:intergenic | 45.0% | |
| GCTATAGCACTGTAACGTAG+CGG | + | chr6.4:389430-389449 | None:intergenic | 45.0% | |
| GCTATAGCATACCTGCTTAC+GGG | + | chr6.4:389512-389531 | None:intergenic | 45.0% | |
| GCTGAGTACAAGATGCTCAT+TGG | - | chr6.4:383772-383791 | MS.gene74427:intron | 45.0% | |
| GGAGGAAAAAGATCGGGTTT+GGG | - | chr6.4:385602-385621 | MS.gene74427:CDS | 45.0% | |
| GTAGCAGTTGTTGAATCCTG+TGG | + | chr6.4:383502-383521 | None:intergenic | 45.0% | |
| GTCAGTATCTGTGTTGTGTC+CGG | - | chr6.4:389009-389028 | MS.gene74427:intron | 45.0% | |
| GTTTGTTTCAGAGCTGGAGA+GGG | - | chr6.4:389837-389856 | MS.gene74427:CDS | 45.0% | |
| TAAGTGCATCATGTTGGTGC+TGG | - | chr6.4:385972-385991 | MS.gene74427:intron | 45.0% | |
| TCAGTGTTCCAGTGTCGTAT+AGG | - | chr6.4:385269-385288 | MS.gene74427:intron | 45.0% | |
| TCAGTTGGGAGATGTGTTCT+TGG | + | chr6.4:384681-384700 | None:intergenic | 45.0% | |
| TCATATGATCCTACGTCCCA+CGG | + | chr6.4:386884-386903 | None:intergenic | 45.0% | |
| TCGTAACACGATCCGTAAGT+AGG | - | chr6.4:386638-386657 | MS.gene74427:intron | 45.0% | |
| TCTGCATATTGTGAGCTTCG+TGG | + | chr6.4:389682-389701 | None:intergenic | 45.0% | |
| TGCGACTTTACCTCTCCTTA+CGG | - | chr6.4:386218-386237 | MS.gene74427:intron | 45.0% | |
| TGCGATTAACGTTGCCTTGA+AGG | - | chr6.4:385692-385711 | MS.gene74427:intron | 45.0% | |
| TGTCCGTATCCGTGTTTCAT+AGG | - | chr6.4:389038-389057 | MS.gene74427:intron | 45.0% | |
| TGTTTGTTTCAGAGCTGGAG+AGG | - | chr6.4:389836-389855 | MS.gene74427:CDS | 45.0% | |
| TTGACATATGGTAGGCTGGT+TGG | - | chr6.4:387713-387732 | MS.gene74427:intron | 45.0% | |
| TTGACCCGAGTTACTGAAAC+GGG | + | chr6.4:385894-385913 | None:intergenic | 45.0% | |
| TTGGACATTAGTCGTCGCTT+CGG | - | chr6.4:385299-385318 | MS.gene74427:intron | 45.0% | |
| TTGTAGTCAGGATCGAGTTC+TGG | + | chr6.4:386916-386935 | None:intergenic | 45.0% | |
| !! | AGGATCGAGTTCTGGTTTGT+AGG | + | chr6.4:386908-386927 | None:intergenic | 45.0% |
| !! | CACTCTAGGGTTAGGAAAGA+TGG | - | chr6.4:385840-385859 | MS.gene74427:intron | 45.0% |
| !! | AAAAAAATAAAAAATACTTA+TGG | - | chr6.4:388395-388414 | MS.gene74427:intron | 5.0% |
| !!! | AATATAAATTTTGAAATTAT+TGG | - | chr6.4:386451-386470 | MS.gene74427:intron | 5.0% |
| !!! | AGTATTTTTTATTTTTTTTA+AGG | + | chr6.4:388393-388412 | None:intergenic | 5.0% |
| AACATGCCTGACACGTCAGT+TGG | + | chr6.4:384696-384715 | None:intergenic | 50.0% | |
| ACATGCCTGACACGTCAGTT+GGG | + | chr6.4:384695-384714 | None:intergenic | 50.0% | |
| AGGCATGTTAGACGCGTTTC+AGG | - | chr6.4:384707-384726 | MS.gene74427:intron | 50.0% | |
| ATACGCGTGATCGGAAGGAA+GGG | - | chr6.4:388615-388634 | MS.gene74427:intron | 50.0% | |
| ATGCTATACGCGTGATCGGA+AGG | - | chr6.4:388610-388629 | MS.gene74427:intron | 50.0% | |
| CAGAATCCACTCCAAGATCG+TGG | + | chr6.4:385785-385804 | None:intergenic | 50.0% | |
| GAGTGTCTGGCACATGTTCA+AGG | + | chr6.4:384757-384776 | None:intergenic | 50.0% | |
| GCAGTTGTTGAATCCTGTGG+TGG | + | chr6.4:383499-383518 | None:intergenic | 50.0% | |
| GGGAAGAATGCGGAACATAG+AGG | - | chr6.4:385376-385395 | MS.gene74427:intron | 50.0% | |
| TATACGCGTGATCGGAAGGA+AGG | - | chr6.4:388614-388633 | MS.gene74427:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr6.4:388880-388899 | MS.gene74427:intron | 50.0% | |
| TGAAGCTGAAAAGCCACCAC+AGG | - | chr6.4:383483-383502 | MS.gene74427:CDS | 50.0% | |
| ! | TACAAGTGTCGTGTCGGTGT+CGG | + | chr6.4:388941-388960 | None:intergenic | 50.0% |
| !! | CGGAGCTTTGTTGTCAATCG+CGG | - | chr6.4:388045-388064 | MS.gene74427:intron | 50.0% |
| !! | TGGACACGGTTAAGAGTGTC+TGG | + | chr6.4:384770-384789 | None:intergenic | 50.0% |
| AACGACTACAGCGGCGCTAT+AGG | + | chr6.4:388215-388234 | None:intergenic | 55.0% | |
| ACTGAGCTGACCCCTGCTAT+TGG | - | chr6.4:384849-384868 | MS.gene74427:intron | 55.0% | |
| CATCTCCCAACTGACGTGTC+AGG | - | chr6.4:384687-384706 | MS.gene74427:intron | 55.0% | |
| CGACTTCTACCACTGCAACC+TGG | + | chr6.4:385812-385831 | None:intergenic | 55.0% | |
| TGCAGTGGTAGAAGTCGCGA+CGG | - | chr6.4:385815-385834 | MS.gene74427:intron | 55.0% | |
| TTCAAGGCGTGTCCGAGAAG+TGG | + | chr6.4:384741-384760 | None:intergenic | 55.0% | |
| TTCTGCGTTCCAGGTTGCAG+TGG | - | chr6.4:385800-385819 | MS.gene74427:intron | 55.0% | |
| ! | TGGAGTGGATTCTGCGTTCC+AGG | - | chr6.4:385791-385810 | MS.gene74427:intron | 55.0% |
| !! | AAAGCACGATTGAGGTGCCG+TGG | - | chr6.4:386864-386883 | MS.gene74427:intron | 55.0% |
| !! | AAGCACGATTGAGGTGCCGT+GGG | - | chr6.4:386865-386884 | MS.gene74427:intron | 55.0% |
| AAGTCGCGACGGTGCACTCT+AGG | - | chr6.4:385826-385845 | MS.gene74427:intron | 60.0% | |
| ACACGACACGTGTCCGACAC+CGG | + | chr6.4:388918-388937 | None:intergenic | 60.0% | |
| ACGGATACGGACACGGACAC+CGG | + | chr6.4:389031-389050 | None:intergenic | 60.0% | |
| AGTCGCGACGGTGCACTCTA+GGG | - | chr6.4:385827-385846 | MS.gene74427:intron | 60.0% | |
| CAGGGGTCAGCTCAGTCTCT+TGG | + | chr6.4:384845-384864 | None:intergenic | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | - | chr6.4:388902-388921 | MS.gene74427:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr6.4:388886-388905 | MS.gene74427:intron | 60.0% | |
| GCGTGTCCGAGAAGTGGTGT+CGG | + | chr6.4:384735-384754 | None:intergenic | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr6.4:388896-388915 | MS.gene74427:intron | 60.0% |
| !! | ATTGAGGTGCCGTGGGACGT+AGG | - | chr6.4:386872-386891 | MS.gene74427:intron | 60.0% |
| !! | CAGGCACCGACACCACTTCT+CGG | - | chr6.4:384726-384745 | MS.gene74427:CDS | 60.0% |
| !! | CGACGGTGCACTCTAGGGTT+AGG | - | chr6.4:385832-385851 | MS.gene74427:intron | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | + | chr6.4:388900-388919 | None:intergenic | 65.0% | |
| CACGACACGTGTCCGACACC+GGG | + | chr6.4:388917-388936 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 383388 | 389983 | 383388 | ID=MS.gene74427 |
| chr6.4 | mRNA | 383388 | 389983 | 383388 | ID=MS.gene74427.t1;Parent=MS.gene74427 |
| chr6.4 | exon | 389821 | 389983 | 389821 | ID=MS.gene74427.t1.exon1;Parent=MS.gene74427.t1 |
| chr6.4 | CDS | 389821 | 389983 | 389821 | ID=cds.MS.gene74427.t1;Parent=MS.gene74427.t1 |
| chr6.4 | exon | 385525 | 385660 | 385525 | ID=MS.gene74427.t1.exon2;Parent=MS.gene74427.t1 |
| chr6.4 | CDS | 385525 | 385660 | 385525 | ID=cds.MS.gene74427.t1;Parent=MS.gene74427.t1 |
| chr6.4 | exon | 384712 | 384796 | 384712 | ID=MS.gene74427.t1.exon3;Parent=MS.gene74427.t1 |
| chr6.4 | CDS | 384712 | 384796 | 384712 | ID=cds.MS.gene74427.t1;Parent=MS.gene74427.t1 |
| chr6.4 | exon | 384552 | 384599 | 384552 | ID=MS.gene74427.t1.exon4;Parent=MS.gene74427.t1 |
| chr6.4 | CDS | 384552 | 384599 | 384552 | ID=cds.MS.gene74427.t1;Parent=MS.gene74427.t1 |
| chr6.4 | exon | 383610 | 383710 | 383610 | ID=MS.gene74427.t1.exon5;Parent=MS.gene74427.t1 |
| chr6.4 | CDS | 383610 | 383710 | 383610 | ID=cds.MS.gene74427.t1;Parent=MS.gene74427.t1 |
| chr6.4 | exon | 383388 | 383523 | 383388 | ID=MS.gene74427.t1.exon6;Parent=MS.gene74427.t1 |
| chr6.4 | CDS | 383388 | 383523 | 383388 | ID=cds.MS.gene74427.t1;Parent=MS.gene74427.t1 |
| Gene Sequence |
| Protein sequence |
