Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74490.t1 | XP_003611874.1 | 92.1 | 557 | 22 | 6 | 1 | 542 | 1 | 550 | 6.00E-181 | 644 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74490.t1 | Q9SW80 | 71.9 | 217 | 46 | 4 | 338 | 542 | 311 | 524 | 8.0e-81 | 302.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74490.t1 | G7KAR9 | 92.1 | 557 | 22 | 6 | 1 | 542 | 1 | 550 | 4.4e-181 | 644.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene74490 | MS.gene025832 | PPI |
MS.gene74490 | MS.gene22770 | PPI |
MS.gene74490 | MS.gene45459 | PPI |
MS.gene74490 | MS.gene050727 | PPI |
MS.gene74490 | MS.gene003842 | PPI |
MS.gene024366 | MS.gene74490 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74490.t1 | MTR_5g018860 | 91.481 | 540 | 27 | 5 | 15 | 542 | 18 | 550 | 0.0 | 809 |
MS.gene74490.t1 | MTR_8g078480 | 51.090 | 642 | 174 | 28 | 1 | 542 | 1 | 602 | 2.65e-149 | 449 |
MS.gene74490.t1 | MTR_8g098815 | 50.885 | 226 | 98 | 4 | 326 | 542 | 174 | 395 | 6.36e-64 | 220 |
MS.gene74490.t1 | MTR_1g023050 | 43.913 | 230 | 96 | 5 | 334 | 542 | 165 | 382 | 9.45e-51 | 184 |
MS.gene74490.t1 | MTR_1g057790 | 41.532 | 248 | 131 | 3 | 306 | 542 | 128 | 372 | 1.00e-48 | 179 |
MS.gene74490.t1 | MTR_3g112300 | 42.342 | 222 | 100 | 6 | 338 | 542 | 161 | 371 | 4.27e-45 | 163 |
MS.gene74490.t1 | MTR_3g112300 | 42.342 | 222 | 100 | 6 | 338 | 542 | 161 | 371 | 6.25e-45 | 163 |
MS.gene74490.t1 | MTR_3g112300 | 42.342 | 222 | 100 | 6 | 338 | 542 | 161 | 371 | 4.44e-44 | 164 |
MS.gene74490.t1 | MTR_3g112300 | 42.342 | 222 | 100 | 6 | 338 | 542 | 161 | 371 | 7.01e-44 | 164 |
MS.gene74490.t1 | MTR_7g106320 | 44.037 | 218 | 102 | 4 | 340 | 542 | 172 | 384 | 3.85e-38 | 149 |
MS.gene74490.t1 | MTR_4g051532 | 43.779 | 217 | 104 | 4 | 339 | 542 | 217 | 428 | 1.43e-37 | 147 |
MS.gene74490.t1 | MTR_4g019450 | 38.735 | 253 | 125 | 9 | 298 | 542 | 156 | 386 | 1.74e-36 | 143 |
MS.gene74490.t1 | MTR_3g112290 | 37.391 | 230 | 112 | 10 | 330 | 542 | 160 | 374 | 3.01e-31 | 126 |
MS.gene74490.t1 | MTR_7g065050 | 37.156 | 218 | 112 | 8 | 331 | 542 | 133 | 331 | 3.41e-30 | 124 |
MS.gene74490.t1 | MTR_2g095050 | 32.314 | 229 | 131 | 6 | 331 | 542 | 244 | 465 | 4.76e-27 | 115 |
MS.gene74490.t1 | MTR_1g016490 | 27.632 | 228 | 131 | 9 | 340 | 542 | 232 | 450 | 5.54e-14 | 75.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74490.t1 | AT4G36870 | 46.833 | 600 | 185 | 21 | 1 | 542 | 1 | 524 | 9.36e-127 | 382 |
MS.gene74490.t1 | AT4G36870 | 46.833 | 600 | 185 | 21 | 1 | 542 | 1 | 524 | 2.23e-126 | 381 |
MS.gene74490.t1 | AT4G36870 | 46.833 | 600 | 185 | 21 | 1 | 542 | 1 | 524 | 5.95e-125 | 383 |
MS.gene74490.t1 | AT4G36870 | 46.833 | 600 | 185 | 21 | 1 | 542 | 1 | 524 | 5.95e-125 | 383 |
MS.gene74490.t1 | AT2G23760 | 71.560 | 218 | 48 | 4 | 337 | 542 | 235 | 450 | 2.54e-100 | 316 |
MS.gene74490.t1 | AT2G23760 | 71.560 | 218 | 48 | 4 | 337 | 542 | 235 | 450 | 2.54e-100 | 316 |
MS.gene74490.t1 | AT2G23760 | 71.560 | 218 | 48 | 4 | 337 | 542 | 235 | 450 | 2.54e-100 | 316 |
MS.gene74490.t1 | AT2G23760 | 71.560 | 218 | 48 | 4 | 337 | 542 | 235 | 450 | 3.05e-99 | 315 |
MS.gene74490.t1 | AT5G41410 | 42.342 | 222 | 105 | 4 | 343 | 542 | 197 | 417 | 2.81e-50 | 182 |
MS.gene74490.t1 | AT1G75410 | 45.161 | 217 | 100 | 5 | 336 | 542 | 165 | 372 | 1.14e-49 | 176 |
MS.gene74490.t1 | AT4G34610 | 44.976 | 209 | 108 | 2 | 336 | 542 | 137 | 340 | 2.16e-49 | 179 |
MS.gene74490.t1 | AT4G34610 | 44.976 | 209 | 108 | 2 | 336 | 542 | 137 | 340 | 2.16e-49 | 179 |
MS.gene74490.t1 | AT4G34610 | 44.976 | 209 | 108 | 2 | 336 | 542 | 137 | 340 | 2.16e-49 | 179 |
MS.gene74490.t1 | AT4G34610 | 44.976 | 209 | 108 | 2 | 336 | 542 | 137 | 340 | 2.16e-49 | 179 |
MS.gene74490.t1 | AT1G75410 | 45.872 | 218 | 97 | 6 | 336 | 542 | 165 | 372 | 1.17e-48 | 176 |
MS.gene74490.t1 | AT1G75410 | 45.872 | 218 | 97 | 6 | 336 | 542 | 165 | 372 | 1.17e-48 | 176 |
MS.gene74490.t1 | AT1G19700 | 45.291 | 223 | 104 | 6 | 333 | 542 | 160 | 377 | 3.77e-47 | 172 |
MS.gene74490.t1 | AT1G19700 | 45.291 | 223 | 104 | 6 | 333 | 542 | 160 | 377 | 3.77e-47 | 172 |
MS.gene74490.t1 | AT1G19700 | 45.291 | 223 | 104 | 6 | 333 | 542 | 160 | 377 | 3.77e-47 | 172 |
MS.gene74490.t1 | AT1G19700 | 45.291 | 223 | 104 | 6 | 333 | 542 | 160 | 377 | 3.77e-47 | 172 |
MS.gene74490.t1 | AT1G19700 | 45.291 | 223 | 104 | 6 | 333 | 542 | 160 | 377 | 3.77e-47 | 172 |
MS.gene74490.t1 | AT2G16400 | 42.793 | 222 | 113 | 4 | 327 | 542 | 98 | 311 | 9.24e-46 | 167 |
MS.gene74490.t1 | AT2G35940 | 42.060 | 233 | 111 | 6 | 333 | 542 | 180 | 411 | 7.71e-43 | 162 |
MS.gene74490.t1 | AT2G35940 | 42.060 | 233 | 111 | 6 | 333 | 542 | 180 | 411 | 7.71e-43 | 162 |
MS.gene74490.t1 | AT2G35940 | 42.060 | 233 | 111 | 6 | 333 | 542 | 180 | 411 | 7.71e-43 | 162 |
MS.gene74490.t1 | AT5G02030 | 36.239 | 218 | 124 | 5 | 331 | 542 | 166 | 374 | 3.16e-31 | 128 |
MS.gene74490.t1 | AT2G27220 | 34.343 | 198 | 105 | 3 | 345 | 542 | 82 | 254 | 1.58e-28 | 118 |
MS.gene74490.t1 | AT2G27220 | 34.343 | 198 | 105 | 3 | 345 | 542 | 82 | 254 | 1.58e-28 | 118 |
MS.gene74490.t1 | AT2G27220 | 32.857 | 210 | 110 | 3 | 345 | 542 | 82 | 272 | 4.65e-27 | 114 |
MS.gene74490.t1 | AT2G27990 | 32.710 | 214 | 121 | 5 | 331 | 542 | 258 | 450 | 5.81e-25 | 108 |
MS.gene74490.t1 | AT2G27990 | 32.710 | 214 | 121 | 5 | 331 | 542 | 258 | 450 | 9.76e-25 | 108 |
MS.gene74490.t1 | AT1G75430 | 34.752 | 141 | 70 | 4 | 414 | 542 | 98 | 228 | 5.02e-20 | 90.9 |
MS.gene74490.t1 | AT1G75430 | 34.752 | 141 | 70 | 4 | 414 | 542 | 98 | 228 | 1.09e-19 | 90.1 |
MS.gene74490.t1 | AT4G32980 | 30.233 | 129 | 75 | 4 | 415 | 542 | 284 | 398 | 1.87e-12 | 70.1 |
MS.gene74490.t1 | AT4G32980 | 30.233 | 129 | 75 | 4 | 415 | 542 | 284 | 398 | 1.87e-12 | 70.1 |
Find 107 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCCAAATTCTGGTAATTT+TGG | 0.109054 | 5.2:-10570594 | MS.gene74490:CDS |
TGTCCAAAATTACCAGAATT+TGG | 0.120803 | 5.2:+10570591 | None:intergenic |
GATTATGACTTTGTAATAAT+TGG | 0.193571 | 5.2:+10570268 | None:intergenic |
AAACCTTGCAAGGTATTATT+AGG | 0.255415 | 5.2:+10570615 | None:intergenic |
AATCAAAGTTTCTTTGGTTT+TGG | 0.259562 | 5.2:+10571165 | None:intergenic |
TAATAATTGGTATCCATTAA+TGG | 0.260156 | 5.2:+10570281 | None:intergenic |
TTGAACAATCAAAGTTTCTT+TGG | 0.260447 | 5.2:+10571159 | None:intergenic |
CAAGGAGGAGGGACCATTAA+TGG | 0.280022 | 5.2:-10570294 | MS.gene74490:CDS |
AAGGTATTATTAGGAGGGTT+AGG | 0.282608 | 5.2:+10570624 | None:intergenic |
TTTGATGTGATGATGGGTTT+TGG | 0.291189 | 5.2:-10568110 | MS.gene74490:CDS |
GCAGCCTAACTTTGTCCCTT+TGG | 0.308045 | 5.2:+10571030 | None:intergenic |
GAAATGCTCTTTGTTGTCTT+AGG | 0.315855 | 5.2:+10567910 | None:intergenic |
CATAATCAAGGTCAAGGATA+TGG | 0.328426 | 5.2:-10570252 | MS.gene74490:CDS |
AAGCCTAGGGGTCTCACCTT+TGG | 0.338082 | 5.2:+10567950 | None:intergenic |
ACATTGGAGGAACAATTGTT+AGG | 0.346921 | 5.2:+10570096 | None:intergenic |
ATTATCATTATCTTCTTCAT+TGG | 0.352999 | 5.2:-10570499 | MS.gene74490:CDS |
TTGCGAATGGGAGGAGGAGG+AGG | 0.368643 | 5.2:-10570453 | MS.gene74490:CDS |
AGGTATTATTAGGAGGGTTA+GGG | 0.391338 | 5.2:+10570625 | None:intergenic |
TTCCTTTGTCAGCTGCTGAT+AGG | 0.391990 | 5.2:-10570029 | MS.gene74490:CDS |
CGAATGGGAGGAGGAGGAGG+AGG | 0.398256 | 5.2:-10570450 | MS.gene74490:CDS |
AGATCCAAAGGGACAAAGTT+AGG | 0.403966 | 5.2:-10571034 | MS.gene74490:CDS |
AGATTGCTTGCTGATAATCT+TGG | 0.405568 | 5.2:+10571120 | None:intergenic |
TCCCATTCGCAATTCTTCCT+CGG | 0.414387 | 5.2:+10570464 | None:intergenic |
CATTGGAGGAACAATTGTTA+GGG | 0.430971 | 5.2:+10570097 | None:intergenic |
TACAATATTCAAGGTGGAAG+TGG | 0.433550 | 5.2:-10570381 | MS.gene74490:CDS |
CAACAGGTTCAGAAAATGAT+TGG | 0.449106 | 5.2:-10570836 | MS.gene74490:CDS |
GAATTGCGAATGGGAGGAGG+AGG | 0.449389 | 5.2:-10570456 | MS.gene74490:CDS |
GTTCAAGTACTTTAAGCCTA+GGG | 0.450908 | 5.2:+10567937 | None:intergenic |
GTTGAAGGACAAGGTGTTCA+AGG | 0.454459 | 5.2:-10570528 | MS.gene74490:CDS |
GATTGCTTGCTGATAATCTT+GGG | 0.458597 | 5.2:+10571121 | None:intergenic |
GAGAAAGAAGGTGCAGGAGG+AGG | 0.463677 | 5.2:-10567978 | MS.gene74490:CDS |
GATTATCAGCAAGCAATCTT+CGG | 0.464683 | 5.2:-10571116 | MS.gene74490:CDS |
AGCAGCAACAACAGATCCAA+AGG | 0.465210 | 5.2:-10571046 | MS.gene74490:CDS |
TATAATAATTACAATATTCA+AGG | 0.469403 | 5.2:-10570390 | MS.gene74490:CDS |
TCTAACAATTCAGCTGTTGA+AGG | 0.474903 | 5.2:+10570912 | None:intergenic |
CTTGATCCATCATACCCATC+TGG | 0.477420 | 5.2:+10567886 | None:intergenic |
GAACTCATTTGATGTGATGA+TGG | 0.480790 | 5.2:-10568117 | MS.gene74490:CDS |
CCTTGCAAGGTATTATTAGG+AGG | 0.482782 | 5.2:+10570618 | None:intergenic |
TGTTCAAGTACTTTAAGCCT+AGG | 0.484746 | 5.2:+10567936 | None:intergenic |
CGATCAGGCAAGCCTCTTTG+TGG | 0.487003 | 5.2:+10567852 | None:intergenic |
CAAGAAGGAGGTGTTGTTGA+AGG | 0.492783 | 5.2:-10570543 | MS.gene74490:CDS |
AATTTACAATTGCAAGGAGG+AGG | 0.494958 | 5.2:-10570306 | MS.gene74490:CDS |
TCTTGAAGCAATTCTTGAGT+AGG | 0.496981 | 5.2:+10570186 | None:intergenic |
AGACAACATCCACAACCAAC+AGG | 0.499590 | 5.2:-10570852 | MS.gene74490:CDS |
ATGGAAGAAGAAGAAGGAAA+TGG | 0.501085 | 5.2:+10571206 | None:intergenic |
TAACCAAAGGTGAGACCCCT+AGG | 0.502296 | 5.2:-10567953 | MS.gene74490:CDS |
CCTCCTAATAATACCTTGCA+AGG | 0.509270 | 5.2:-10570618 | MS.gene74490:CDS |
AACAATTGTTCCTCCAATGT+TGG | 0.514198 | 5.2:-10570093 | MS.gene74490:CDS |
TGTTGATGATTTAATTTGTA+CGG | 0.516004 | 5.2:+10570336 | None:intergenic |
TTGAATTTATCAGAAGGAGA+AGG | 0.516929 | 5.2:-10570999 | MS.gene74490:CDS |
GAAGGAGAAGGAGAAGAAAG+AGG | 0.521795 | 5.2:-10570987 | MS.gene74490:CDS |
GCAGCAACAACAGATCCAAA+GGG | 0.522504 | 5.2:-10571045 | MS.gene74490:CDS |
ATCTTCGGCTTCTCCTCGAA+TGG | 0.524189 | 5.2:-10571101 | MS.gene74490:CDS |
GACAAAGTTAGGCTGCTACA+AGG | 0.533345 | 5.2:-10571023 | MS.gene74490:CDS |
AGGATTAGAATCACCAACAT+TGG | 0.534289 | 5.2:+10570080 | None:intergenic |
TATACTTGATACAGGTGGAC+AGG | 0.536316 | 5.2:-10568178 | MS.gene74490:intron |
CTATTGTGAACAAATGCAAA+TGG | 0.548377 | 5.2:-10568144 | MS.gene74490:CDS |
AAGCAAAGTTGTGAGTTACT+AGG | 0.549716 | 5.2:-10568002 | MS.gene74490:CDS |
CTTGCAAGGTATTATTAGGA+GGG | 0.550286 | 5.2:+10570619 | None:intergenic |
TGATCTCTCGAATCCATTCG+AGG | 0.551486 | 5.2:+10571088 | None:intergenic |
TTGTTTGATGAGATTGAGAA+GGG | 0.552912 | 5.2:+10570712 | None:intergenic |
GGAGGTGTGTATGAAACAGC+AGG | 0.555434 | 5.2:-10570966 | MS.gene74490:CDS |
CAAGGGTTGAATTTATCAGA+AGG | 0.556382 | 5.2:-10571005 | MS.gene74490:CDS |
GAAGAATTGCGAATGGGAGG+AGG | 0.556651 | 5.2:-10570459 | MS.gene74490:CDS |
CAAAGTCATAATCAAGGTCA+AGG | 0.557301 | 5.2:-10570258 | MS.gene74490:CDS |
GGTTCAGAAAATGATTGGTA+TGG | 0.558104 | 5.2:-10570831 | MS.gene74490:CDS |
TCAGCAGCTGACAAAGGAAG+AGG | 0.558150 | 5.2:+10570033 | None:intergenic |
ATTTCACCAGATGGGTATGA+TGG | 0.563946 | 5.2:-10567892 | MS.gene74490:CDS |
ATAGGATTGAACATCAAAGA+AGG | 0.565025 | 5.2:-10570011 | MS.gene74490:CDS |
AACTCATTTGATGTGATGAT+GGG | 0.566821 | 5.2:-10568116 | MS.gene74490:CDS |
ACAAAGAGCATTTCACCAGA+TGG | 0.570809 | 5.2:-10567901 | MS.gene74490:CDS |
TAAACAATGGAAGAAGAAGA+AGG | 0.571641 | 5.2:+10571200 | None:intergenic |
AAAACATTGACAGAACGATC+AGG | 0.573427 | 5.2:+10567837 | None:intergenic |
GGAGGTGTTGTTGAAGGACA+AGG | 0.574861 | 5.2:-10570537 | MS.gene74490:CDS |
ATTAGAATCACCAACATTGG+AGG | 0.575203 | 5.2:+10570083 | None:intergenic |
GCCGAGGAAGAATTGCGAAT+GGG | 0.575509 | 5.2:-10570465 | MS.gene74490:CDS |
GCATTGAATTTACAATTGCA+AGG | 0.575976 | 5.2:-10570312 | MS.gene74490:CDS |
CTAGGTGAGAAAGAAGGTGC+AGG | 0.576408 | 5.2:-10567984 | MS.gene74490:CDS |
ACAAAGTTAGGCTGCTACAA+GGG | 0.578561 | 5.2:-10571022 | MS.gene74490:CDS |
GTATGATGGATCAAGAAGCT+TGG | 0.579404 | 5.2:-10567878 | MS.gene74490:CDS |
TTATTACAAAGTCATAATCA+AGG | 0.585308 | 5.2:-10570264 | MS.gene74490:CDS |
AGAATTTGGAAAACCTTGCA+AGG | 0.586012 | 5.2:+10570605 | None:intergenic |
TACGGATATGATGAAGAAGA+TGG | 0.586895 | 5.2:+10570354 | None:intergenic |
GTGTGTCTTCAAGTAAACAA+TGG | 0.592067 | 5.2:+10571187 | None:intergenic |
CAAAGAGCATTTCACCAGAT+GGG | 0.592402 | 5.2:-10567900 | MS.gene74490:CDS |
GTTGTTTGATGAGATTGAGA+AGG | 0.596534 | 5.2:+10570711 | None:intergenic |
TTCAAGTACTTTAAGCCTAG+GGG | 0.597443 | 5.2:+10567938 | None:intergenic |
AATATTCAAGGTGGAAGTGG+AGG | 0.598539 | 5.2:-10570378 | MS.gene74490:CDS |
ATTTACAATTGCAAGGAGGA+GGG | 0.600973 | 5.2:-10570305 | MS.gene74490:CDS |
ATCCTATCAGCAGCTGACAA+AGG | 0.603493 | 5.2:+10570027 | None:intergenic |
AATAGTACTACTACTCAAGA+AGG | 0.607029 | 5.2:-10570558 | MS.gene74490:CDS |
AGCCGAGGAAGAATTGCGAA+TGG | 0.611459 | 5.2:-10570466 | MS.gene74490:CDS |
GAGGAAGAATTGCGAATGGG+AGG | 0.619684 | 5.2:-10570462 | MS.gene74490:CDS |
GGAGAAGGAGAAGAAAGAGG+AGG | 0.619996 | 5.2:-10570984 | MS.gene74490:CDS |
GATTGAACATCAAAGAAGGA+AGG | 0.620262 | 5.2:-10570007 | MS.gene74490:intron |
AATAATTACAATATTCAAGG+TGG | 0.620476 | 5.2:-10570387 | MS.gene74490:CDS |
GCAGGAGGAGGTTTAACCAA+AGG | 0.632688 | 5.2:-10567966 | MS.gene74490:CDS |
TGGTATGGTAATAACAGACA+AGG | 0.634269 | 5.2:-10570816 | MS.gene74490:CDS |
GGTGAGAAAGAAGGTGCAGG+AGG | 0.641973 | 5.2:-10567981 | MS.gene74490:CDS |
GAGTTACTAGGTGAGAAAGA+AGG | 0.648257 | 5.2:-10567990 | MS.gene74490:CDS |
AACATGGGAATAGCAACACT+AGG | 0.651927 | 5.2:-10571230 | MS.gene74490:CDS |
ATTGGAAGCTGCAAAAGCCG+AGG | 0.656833 | 5.2:-10570481 | MS.gene74490:CDS |
AGTACTACTACTCAAGAAGG+AGG | 0.671426 | 5.2:-10570555 | MS.gene74490:CDS |
TTGAATTTACAATTGCAAGG+AGG | 0.690593 | 5.2:-10570309 | MS.gene74490:CDS |
GAAGCTTGGAGACCACAAAG+AGG | 0.697296 | 5.2:-10567864 | MS.gene74490:CDS |
GGTATGGTAATAACAGACAA+GGG | 0.699769 | 5.2:-10570815 | MS.gene74490:CDS |
AGACGAAGAACGAAACGTTG+CGG | 0.719547 | 5.2:+10570887 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATAATAATAATTTTTTTA+AGG | - | chr5.2:10569604-10569623 | MS.gene74490:intron | 0.0% |
!! | AAATATGAAGAAAAATATAT+GGG | + | chr5.2:10569133-10569152 | None:intergenic | 10.0% |
!! | AATTTAAAAAATATATCAGT+TGG | + | chr5.2:10569782-10569801 | None:intergenic | 10.0% |
!! | TAAATATGAAGAAAAATATA+TGG | + | chr5.2:10569134-10569153 | None:intergenic | 10.0% |
!! | TATAATAATTACAATATTCA+AGG | - | chr5.2:10568637-10568656 | MS.gene74490:intron | 10.0% |
!! | TTTAAATTATTAATGATGAT+CGG | + | chr5.2:10570824-10570843 | None:intergenic | 10.0% |
!!! | TATTAATCAGAATTTTATAT+TGG | + | chr5.2:10569580-10569599 | None:intergenic | 10.0% |
!!! | TTTTAATCAATCTATTTAAT+TGG | - | chr5.2:10569926-10569945 | MS.gene74490:intron | 10.0% |
!! | AATATGAAGAAAAATATATG+GGG | + | chr5.2:10569132-10569151 | None:intergenic | 15.0% |
!! | TATCTTCAAAATTATTTATG+CGG | - | chr5.2:10569505-10569524 | MS.gene74490:intron | 15.0% |
!!! | CACATAAATTTCATTTTTAA+TGG | + | chr5.2:10569375-10569394 | None:intergenic | 15.0% |
!!! | TATATTATTACATTTTGCTA+TGG | - | chr5.2:10569470-10569489 | MS.gene74490:intron | 15.0% |
!!! | TATTTGTTTTAAGAATATCT+TGG | + | chr5.2:10570596-10570615 | None:intergenic | 15.0% |
!! | AAAATGAATATACTTGATAC+AGG | - | chr5.2:10570841-10570860 | MS.gene74490:CDS | 20.0% |
!! | AATAATTACAATATTCAAGG+TGG | - | chr5.2:10568640-10568659 | MS.gene74490:intron | 20.0% |
!! | AATCAATCTATTTAATTGGT+AGG | - | chr5.2:10569930-10569949 | MS.gene74490:intron | 20.0% |
!! | ATATACAATAATTCCATATC+TGG | + | chr5.2:10569455-10569474 | None:intergenic | 20.0% |
!! | ATTATCATTATCTTCTTCAT+TGG | - | chr5.2:10568528-10568547 | MS.gene74490:intron | 20.0% |
!! | ATTTCTATGATAGGTATATT+TGG | + | chr5.2:10570176-10570195 | None:intergenic | 20.0% |
!! | GATTATGACTTTGTAATAAT+TGG | + | chr5.2:10568762-10568781 | None:intergenic | 20.0% |
!! | GTAACTAAAATTTATTTGAG+AGG | + | chr5.2:10570753-10570772 | None:intergenic | 20.0% |
!! | TAATAATTGGTATCCATTAA+TGG | + | chr5.2:10568749-10568768 | None:intergenic | 20.0% |
!! | TATCAACAATGTAATGATTA+AGG | + | chr5.2:10570637-10570656 | None:intergenic | 20.0% |
!! | TTATTACAAAGTCATAATCA+AGG | - | chr5.2:10568763-10568782 | MS.gene74490:intron | 20.0% |
!!! | AAAAAATATATCAGTTGGTA+TGG | + | chr5.2:10569777-10569796 | None:intergenic | 20.0% |
!!! | AAAGTTAAGTGTTTTTCATA+TGG | + | chr5.2:10569403-10569422 | None:intergenic | 20.0% |
!!! | ATTTTGCTTATAATAGTCAT+CGG | - | chr5.2:10570427-10570446 | MS.gene74490:CDS | 20.0% |
!!! | CTGTAAAATATTTCTATGAT+AGG | + | chr5.2:10570185-10570204 | None:intergenic | 20.0% |
!!! | TGTTGATGATTTAATTTGTA+CGG | + | chr5.2:10568694-10568713 | None:intergenic | 20.0% |
!!! | TTATGTTTTTTTATGTGCAT+CGG | + | chr5.2:10570714-10570733 | None:intergenic | 20.0% |
!!! | TTTTAGCTTATAATAGAGAA+CGG | + | chr5.2:10570314-10570333 | None:intergenic | 20.0% |
! | ACTTTGACCAAAAAAATTGA+AGG | + | chr5.2:10570680-10570699 | None:intergenic | 25.0% |
! | CATATGTACCAACAAATATT+TGG | - | chr5.2:10570566-10570585 | MS.gene74490:CDS | 25.0% |
! | CTTAGAATTCAATTGATACA+TGG | - | chr5.2:10569227-10569246 | MS.gene74490:intron | 25.0% |
! | TATGGACAATAATATATGCA+AGG | + | chr5.2:10569759-10569778 | None:intergenic | 25.0% |
! | TATTTGAGAAAGAAAAAAGC+CGG | - | chr5.2:10569819-10569838 | MS.gene74490:intron | 25.0% |
! | TCTTTATGTGCTTATCAATT+TGG | - | chr5.2:10569173-10569192 | MS.gene74490:intron | 25.0% |
! | TTGAACAATCAAAGTTTCTT+TGG | + | chr5.2:10567871-10567890 | None:intergenic | 25.0% |
! | TTGGATTACCAAATATTTGT+TGG | + | chr5.2:10570577-10570596 | None:intergenic | 25.0% |
!! | AATAAATTAGTTCTCTTCTC+CGG | - | chr5.2:10569691-10569710 | MS.gene74490:intron | 25.0% |
!! | CAAATATTTGTTGGTACATA+TGG | + | chr5.2:10570568-10570587 | None:intergenic | 25.0% |
!! | TTCATTGTGGATTTTAAATG+AGG | + | chr5.2:10570482-10570501 | None:intergenic | 25.0% |
!! | TTTCCAAATTCTGGTAATTT+TGG | - | chr5.2:10568433-10568452 | MS.gene74490:intron | 25.0% |
!! | TTTCGACTTTTACAATTGAT+AGG | + | chr5.2:10570517-10570536 | None:intergenic | 25.0% |
!! | TTTTACAATTGATAGGTTTC+AGG | + | chr5.2:10570510-10570529 | None:intergenic | 25.0% |
!!! | AATCAAAGTTTCTTTGGTTT+TGG | + | chr5.2:10567865-10567884 | None:intergenic | 25.0% |
!!! | CTTGAATCCTTCAATTTTTT+TGG | - | chr5.2:10570670-10570689 | MS.gene74490:CDS | 25.0% |
!!! | TTTTGGGTTTTGTTTTAGTT+TGG | - | chr5.2:10569977-10569996 | MS.gene74490:intron | 25.0% |
AACTCATTTGATGTGATGAT+GGG | - | chr5.2:10570911-10570930 | MS.gene74490:CDS | 30.0% | |
AATAGAGAACGGATAGAATA+AGG | + | chr5.2:10570303-10570322 | None:intergenic | 30.0% | |
AATAGTACTACTACTCAAGA+AGG | - | chr5.2:10568469-10568488 | MS.gene74490:intron | 30.0% | |
ACAATAATATATGCAAGGTC+CGG | + | chr5.2:10569754-10569773 | None:intergenic | 30.0% | |
ATAGAGAACGGATAGAATAA+GGG | + | chr5.2:10570302-10570321 | None:intergenic | 30.0% | |
ATAGGATTGAACATCAAAGA+AGG | - | chr5.2:10569016-10569035 | MS.gene74490:intron | 30.0% | |
ATGAAGAAAAATATATGGGG+AGG | + | chr5.2:10569129-10569148 | None:intergenic | 30.0% | |
ATGAATATACTTGATACAGG+TGG | - | chr5.2:10570844-10570863 | MS.gene74490:CDS | 30.0% | |
ATTATTTATGCGGTAAGATG+TGG | - | chr5.2:10569515-10569534 | MS.gene74490:intron | 30.0% | |
CAAGTGAGATATCTTAACAA+AGG | + | chr5.2:10570214-10570233 | None:intergenic | 30.0% | |
CAATCTATTTAATTGGTAGG+AGG | - | chr5.2:10569933-10569952 | MS.gene74490:intron | 30.0% | |
CTATTGTGAACAAATGCAAA+TGG | - | chr5.2:10570883-10570902 | MS.gene74490:CDS | 30.0% | |
GCATTGAATTTACAATTGCA+AGG | - | chr5.2:10568715-10568734 | MS.gene74490:intron | 30.0% | |
TAAACAATGGAAGAAGAAGA+AGG | + | chr5.2:10567830-10567849 | None:intergenic | 30.0% | |
TACTGAATGAATGATGTATG+CGG | - | chr5.2:10570353-10570372 | MS.gene74490:CDS | 30.0% | |
TAGGTATATTTGGATACGTA+AGG | + | chr5.2:10570166-10570185 | None:intergenic | 30.0% | |
TGAAGAAAAATATATGGGGA+GGG | + | chr5.2:10569128-10569147 | None:intergenic | 30.0% | |
TGCTACGTTACTTATTGATA+TGG | + | chr5.2:10570119-10570138 | None:intergenic | 30.0% | |
TGTCCAAAATTACCAGAATT+TGG | + | chr5.2:10568439-10568458 | None:intergenic | 30.0% | |
TTGAATTTACAATTGCAAGG+AGG | - | chr5.2:10568718-10568737 | MS.gene74490:intron | 30.0% | |
TTGAATTTATCAGAAGGAGA+AGG | - | chr5.2:10568028-10568047 | MS.gene74490:CDS | 30.0% | |
TTGTTTGATGAGATTGAGAA+GGG | + | chr5.2:10568318-10568337 | None:intergenic | 30.0% | |
! | AAACCTTGCAAGGTATTATT+AGG | + | chr5.2:10568415-10568434 | None:intergenic | 30.0% |
! | GTAATTTTGGACAATTCACA+TGG | - | chr5.2:10568446-10568465 | MS.gene74490:intron | 30.0% |
! | GTTTCAGGTAAATTTCATTG+TGG | + | chr5.2:10570495-10570514 | None:intergenic | 30.0% |
!!! | GTTGAAGAATTTTGATGATG+AGG | + | chr5.2:10568367-10568386 | None:intergenic | 30.0% |
AAAACATTGACAGAACGATC+AGG | + | chr5.2:10571193-10571212 | None:intergenic | 35.0% | |
AAATGAGAGGACTAACCATT+AGG | - | chr5.2:10570011-10570030 | MS.gene74490:CDS | 35.0% | |
AACAATTGTTCCTCCAATGT+TGG | - | chr5.2:10568934-10568953 | MS.gene74490:intron | 35.0% | |
AAGAAAAATATATGGGGAGG+GGG | + | chr5.2:10569126-10569145 | None:intergenic | 35.0% | |
AAGCAAAGTTGTGAGTTACT+AGG | - | chr5.2:10571025-10571044 | MS.gene74490:CDS | 35.0% | |
AATAATATATGCAAGGTCCG+GGG | + | chr5.2:10569752-10569771 | None:intergenic | 35.0% | |
AATTTACAATTGCAAGGAGG+AGG | - | chr5.2:10568721-10568740 | MS.gene74490:intron | 35.0% | |
ACATTGGAGGAACAATTGTT+AGG | + | chr5.2:10568934-10568953 | None:intergenic | 35.0% | |
AGAATTTGGAAAACCTTGCA+AGG | + | chr5.2:10568425-10568444 | None:intergenic | 35.0% | |
AGGATTAGAATCACCAACAT+TGG | + | chr5.2:10568950-10568969 | None:intergenic | 35.0% | |
AGGTATTATTAGGAGGGTTA+GGG | + | chr5.2:10568405-10568424 | None:intergenic | 35.0% | |
ATGGAAGAAGAAGAAGGAAA+TGG | + | chr5.2:10567824-10567843 | None:intergenic | 35.0% | |
ATTAGAATCACCAACATTGG+AGG | + | chr5.2:10568947-10568966 | None:intergenic | 35.0% | |
ATTTACAATTGCAAGGAGGA+GGG | - | chr5.2:10568722-10568741 | MS.gene74490:intron | 35.0% | |
CAAAGTCATAATCAAGGTCA+AGG | - | chr5.2:10568769-10568788 | MS.gene74490:intron | 35.0% | |
CAACAGGTTCAGAAAATGAT+TGG | - | chr5.2:10568191-10568210 | MS.gene74490:intron | 35.0% | |
CAAGGGTTGAATTTATCAGA+AGG | - | chr5.2:10568022-10568041 | MS.gene74490:CDS | 35.0% | |
CAATAATATATGCAAGGTCC+GGG | + | chr5.2:10569753-10569772 | None:intergenic | 35.0% | |
CATAATCAAGGTCAAGGATA+TGG | - | chr5.2:10568775-10568794 | MS.gene74490:intron | 35.0% | |
CATTGGAGGAACAATTGTTA+GGG | + | chr5.2:10568933-10568952 | None:intergenic | 35.0% | |
CTATTTAATTGGTAGGAGGT+GGG | - | chr5.2:10569937-10569956 | MS.gene74490:intron | 35.0% | |
GAACTCATTTGATGTGATGA+TGG | - | chr5.2:10570910-10570929 | MS.gene74490:CDS | 35.0% | |
GAAGAAAAATATATGGGGAG+GGG | + | chr5.2:10569127-10569146 | None:intergenic | 35.0% | |
GATTATCAGCAAGCAATCTT+CGG | - | chr5.2:10567911-10567930 | MS.gene74490:CDS | 35.0% | |
GATTGAACATCAAAGAAGGA+AGG | - | chr5.2:10569020-10569039 | MS.gene74490:intron | 35.0% | |
GGTATGGTAATAACAGACAA+GGG | - | chr5.2:10568212-10568231 | MS.gene74490:intron | 35.0% | |
GGTTCAGAAAATGATTGGTA+TGG | - | chr5.2:10568196-10568215 | MS.gene74490:intron | 35.0% | |
GTATATTTGGATACGTAAGG+TGG | + | chr5.2:10570163-10570182 | None:intergenic | 35.0% | |
GTGTGTCTTCAAGTAAACAA+TGG | + | chr5.2:10567843-10567862 | None:intergenic | 35.0% | |
GTTAAGATATCTCACTTGAC+AGG | - | chr5.2:10570216-10570235 | MS.gene74490:CDS | 35.0% | |
GTTCAAGTACTTTAAGCCTA+GGG | + | chr5.2:10571093-10571112 | None:intergenic | 35.0% | |
GTTCATGAGAAAAAGTTGCA+TGG | + | chr5.2:10568296-10568315 | None:intergenic | 35.0% | |
GTTGTTTGATGAGATTGAGA+AGG | + | chr5.2:10568319-10568338 | None:intergenic | 35.0% | |
TACAATATTCAAGGTGGAAG+TGG | - | chr5.2:10568646-10568665 | MS.gene74490:intron | 35.0% | |
TACGGATATGATGAAGAAGA+TGG | + | chr5.2:10568676-10568695 | None:intergenic | 35.0% | |
TCTAACAATTCAGCTGTTGA+AGG | + | chr5.2:10568118-10568137 | None:intergenic | 35.0% | |
TCTATTTAATTGGTAGGAGG+TGG | - | chr5.2:10569936-10569955 | MS.gene74490:intron | 35.0% | |
TCTTGAAGCAATTCTTGAGT+AGG | + | chr5.2:10568844-10568863 | None:intergenic | 35.0% | |
TGGTATGGTAATAACAGACA+AGG | - | chr5.2:10568211-10568230 | MS.gene74490:intron | 35.0% | |
TGTTCAAGTACTTTAAGCCT+AGG | + | chr5.2:10571094-10571113 | None:intergenic | 35.0% | |
TTCAAGTACTTTAAGCCTAG+GGG | + | chr5.2:10571092-10571111 | None:intergenic | 35.0% | |
! | AAGCAATGTCTCGACATTTT+CGG | - | chr5.2:10570972-10570991 | MS.gene74490:CDS | 35.0% |
! | AAGGTATTATTAGGAGGGTT+AGG | + | chr5.2:10568406-10568425 | None:intergenic | 35.0% |
! | AGATTGCTTGCTGATAATCT+TGG | + | chr5.2:10567910-10567929 | None:intergenic | 35.0% |
! | CAATCATTTTCTGAACCTGT+TGG | + | chr5.2:10568193-10568212 | None:intergenic | 35.0% |
! | CTTGCAAGGTATTATTAGGA+GGG | + | chr5.2:10568411-10568430 | None:intergenic | 35.0% |
! | GAAATGCTCTTTGTTGTCTT+AGG | + | chr5.2:10571120-10571139 | None:intergenic | 35.0% |
! | GATTGCTTGCTGATAATCTT+GGG | + | chr5.2:10567909-10567928 | None:intergenic | 35.0% |
! | GTGTCTTTTGATGAAGAAGA+AGG | + | chr5.2:10568970-10568989 | None:intergenic | 35.0% |
! | TGGATTTTAAATGAGGCTGA+TGG | + | chr5.2:10570475-10570494 | None:intergenic | 35.0% |
! | TTGCAAGGTTTTCCAAATTC+TGG | - | chr5.2:10568424-10568443 | MS.gene74490:intron | 35.0% |
!!! | GAAGAATTTTGATGATGAGG+TGG | + | chr5.2:10568364-10568383 | None:intergenic | 35.0% |
!!! | TTTGATGTGATGATGGGTTT+TGG | - | chr5.2:10570917-10570936 | MS.gene74490:CDS | 35.0% |
AATATTCAAGGTGGAAGTGG+AGG | - | chr5.2:10568649-10568668 | MS.gene74490:intron | 40.0% | |
ACAAAGTTAGGCTGCTACAA+GGG | - | chr5.2:10568005-10568024 | MS.gene74490:CDS | 40.0% | |
ACTCACTCAGTTGCTCAATA+TGG | - | chr5.2:10570088-10570107 | MS.gene74490:CDS | 40.0% | |
AGAAAAATATATGGGGAGGG+GGG | + | chr5.2:10569125-10569144 | None:intergenic | 40.0% | |
AGATCCAAAGGGACAAAGTT+AGG | - | chr5.2:10567993-10568012 | MS.gene74490:CDS | 40.0% | |
AGTACTACTACTCAAGAAGG+AGG | - | chr5.2:10568472-10568491 | MS.gene74490:intron | 40.0% | |
ATTACATGCCTCATCAAGCA+TGG | + | chr5.2:10569058-10569077 | None:intergenic | 40.0% | |
ATTTCACCAGATGGGTATGA+TGG | - | chr5.2:10571135-10571154 | MS.gene74490:CDS | 40.0% | |
CACCAAAAAAAGATACCAGC+CGG | + | chr5.2:10569713-10569732 | None:intergenic | 40.0% | |
CCATATCTGGTTAGATGCAT+GGG | + | chr5.2:10569442-10569461 | None:intergenic | 40.0% | |
CCTCCTAATAATACCTTGCA+AGG | - | chr5.2:10568409-10568428 | MS.gene74490:intron | 40.0% | |
CTCACTCAGTTGCTCAATAT+GGG | - | chr5.2:10570089-10570108 | MS.gene74490:CDS | 40.0% | |
GACGTATTCTCTTCTCCTAA+TGG | + | chr5.2:10570029-10570048 | None:intergenic | 40.0% | |
GAGTTACTAGGTGAGAAAGA+AGG | - | chr5.2:10571037-10571056 | MS.gene74490:CDS | 40.0% | |
GGTGAAAACCATGAAATGAG+AGG | - | chr5.2:10569998-10570017 | MS.gene74490:intron | 40.0% | |
TAGGAATATCCTCCTTGCAT+AGG | - | chr5.2:10569851-10569870 | MS.gene74490:intron | 40.0% | |
TATACTTGATACAGGTGGAC+AGG | - | chr5.2:10570849-10570868 | MS.gene74490:CDS | 40.0% | |
TCCATATCTGGTTAGATGCA+TGG | + | chr5.2:10569443-10569462 | None:intergenic | 40.0% | |
! | CCTTGCAAGGTATTATTAGG+AGG | + | chr5.2:10568412-10568431 | None:intergenic | 40.0% |
! | CTTCAAGAGTTTTGCAGTGT+TGG | - | chr5.2:10568856-10568875 | MS.gene74490:intron | 40.0% |
! | TGGTTAGTCCTCTCATTTCA+TGG | + | chr5.2:10570009-10570028 | None:intergenic | 40.0% |
! | TTTTGTGCTAGTGCTGTGTA+TGG | + | chr5.2:10570953-10570972 | None:intergenic | 40.0% |
!! | AAGAGTTTTGCAGTGTTGGA+AGG | - | chr5.2:10568860-10568879 | MS.gene74490:intron | 40.0% |
!! | ACAAAGAGCATTTCACCAGA+TGG | - | chr5.2:10571126-10571145 | MS.gene74490:CDS | 40.0% |
!! | AGAGTTTTGCAGTGTTGGAA+GGG | - | chr5.2:10568861-10568880 | MS.gene74490:intron | 40.0% |
!! | CAAAGAGCATTTCACCAGAT+GGG | - | chr5.2:10571127-10571146 | MS.gene74490:CDS | 40.0% |
!! | GTATGATGGATCAAGAAGCT+TGG | - | chr5.2:10571149-10571168 | MS.gene74490:CDS | 40.0% |
!! | TTTTCTGAACCTGTTGGTTG+TGG | + | chr5.2:10568187-10568206 | None:intergenic | 40.0% |
!!! | CTGGTATCTTTTTTTGGTGG+TGG | - | chr5.2:10569714-10569733 | MS.gene74490:intron | 40.0% |
!!! | CTGTCAATGTTTTGAGAGCT+TGG | - | chr5.2:10571200-10571219 | MS.gene74490:CDS | 40.0% |
!!! | GAATTTTGATGATGAGGTGG+TGG | + | chr5.2:10568361-10568380 | None:intergenic | 40.0% |
ACTAATCCTCCTATGCAAGG+AGG | + | chr5.2:10569863-10569882 | None:intergenic | 45.0% | |
AGACAACATCCACAACCAAC+AGG | - | chr5.2:10568175-10568194 | MS.gene74490:intron | 45.0% | |
AGACGAAGAACGAAACGTTG+CGG | + | chr5.2:10568143-10568162 | None:intergenic | 45.0% | |
AGCAGCAACAACAGATCCAA+AGG | - | chr5.2:10567981-10568000 | MS.gene74490:CDS | 45.0% | |
ATCCTATCAGCAGCTGACAA+AGG | + | chr5.2:10569003-10569022 | None:intergenic | 45.0% | |
ATGAAGAGAGAAGGAGAGAG+AGG | + | chr5.2:10569088-10569107 | None:intergenic | 45.0% | |
CCAACTAATCCTCCTATGCA+AGG | + | chr5.2:10569866-10569885 | None:intergenic | 45.0% | |
CCCATGCATCTAACCAGATA+TGG | - | chr5.2:10569439-10569458 | MS.gene74490:intron | 45.0% | |
CTCTCCTTCTCTCTTCATCA+AGG | - | chr5.2:10569090-10569109 | MS.gene74490:intron | 45.0% | |
CTTGATCCATCATACCCATC+TGG | + | chr5.2:10571144-10571163 | None:intergenic | 45.0% | |
GAAAAATATATGGGGAGGGG+GGG | + | chr5.2:10569124-10569143 | None:intergenic | 45.0% | |
GAAGGAGAAGGAGAAGAAAG+AGG | - | chr5.2:10568040-10568059 | MS.gene74490:CDS | 45.0% | |
GAATATCCTCCTTGCATAGG+AGG | - | chr5.2:10569854-10569873 | MS.gene74490:intron | 45.0% | |
GACAAAGTTAGGCTGCTACA+AGG | - | chr5.2:10568004-10568023 | MS.gene74490:CDS | 45.0% | |
GATATTCCTACTGTTCCAGC+CGG | + | chr5.2:10569841-10569860 | None:intergenic | 45.0% | |
GCAGCAACAACAGATCCAAA+GGG | - | chr5.2:10567982-10568001 | MS.gene74490:CDS | 45.0% | |
GCTTCTTTCCATGCTTGATG+AGG | - | chr5.2:10569047-10569066 | MS.gene74490:intron | 45.0% | |
TCCCATTCGCAATTCTTCCT+CGG | + | chr5.2:10568566-10568585 | None:intergenic | 45.0% | |
TCTCTCTTCATCAAGGCTCA+AGG | - | chr5.2:10569097-10569116 | MS.gene74490:intron | 45.0% | |
TGAAGAGAGAAGGAGAGAGA+GGG | + | chr5.2:10569087-10569106 | None:intergenic | 45.0% | |
TGAGAAAGAAAAAAGCCGGC+TGG | - | chr5.2:10569823-10569842 | MS.gene74490:intron | 45.0% | |
TGAGCCTTGATGAAGAGAGA+AGG | + | chr5.2:10569097-10569116 | None:intergenic | 45.0% | |
TGATCTCTCGAATCCATTCG+AGG | + | chr5.2:10567942-10567961 | None:intergenic | 45.0% | |
TTCCTCCTGTTTCCAACAGA+AGG | - | chr5.2:10570064-10570083 | MS.gene74490:CDS | 45.0% | |
TTCCTTTGTCAGCTGCTGAT+AGG | - | chr5.2:10568998-10569017 | MS.gene74490:intron | 45.0% | |
! | AATTAGTTCTCTTCTCCGGC+TGG | - | chr5.2:10569695-10569714 | MS.gene74490:intron | 45.0% |
! | CCTTGCATAGGAGGATTAGT+TGG | - | chr5.2:10569863-10569882 | MS.gene74490:intron | 45.0% |
! | GTTGAAGGACAAGGTGTTCA+AGG | - | chr5.2:10568499-10568518 | MS.gene74490:intron | 45.0% |
!! | ATAGGAGGATTAGTTGGTGG+GGG | - | chr5.2:10569869-10569888 | MS.gene74490:intron | 45.0% |
!! | CAAGAAGGAGGTGTTGTTGA+AGG | - | chr5.2:10568484-10568503 | MS.gene74490:intron | 45.0% |
!! | CATAGGAGGATTAGTTGGTG+GGG | - | chr5.2:10569868-10569887 | MS.gene74490:intron | 45.0% |
!! | GAGTTTTGCAGTGTTGGAAG+GGG | - | chr5.2:10568862-10568881 | MS.gene74490:intron | 45.0% |
!! | GCATAGGAGGATTAGTTGGT+GGG | - | chr5.2:10569867-10569886 | MS.gene74490:intron | 45.0% |
!! | TGCATAGGAGGATTAGTTGG+TGG | - | chr5.2:10569866-10569885 | MS.gene74490:intron | 45.0% |
!!! | CGGCTGGTATCTTTTTTTGG+TGG | - | chr5.2:10569711-10569730 | MS.gene74490:intron | 45.0% |
!!! | CTCCGGCTGGTATCTTTTTT+TGG | - | chr5.2:10569708-10569727 | MS.gene74490:intron | 45.0% |
!!! | TTTTGATGATGAGGTGGTGG+AGG | + | chr5.2:10568358-10568377 | None:intergenic | 45.0% |
!!! | ATTTTAATAGTATTAATTTT+GGG | - | chr5.2:10569961-10569980 | MS.gene74490:intron | 5.0% |
!!! | TATTTTAATAGTATTAATTT+TGG | - | chr5.2:10569960-10569979 | MS.gene74490:intron | 5.0% |
AAAAAGCCGGCTGGAACAGT+AGG | - | chr5.2:10569832-10569851 | MS.gene74490:intron | 50.0% | |
ACTGAGTGAGTGCCTTCTGT+TGG | + | chr5.2:10570079-10570098 | None:intergenic | 50.0% | |
AGCCGAGGAAGAATTGCGAA+TGG | - | chr5.2:10568561-10568580 | MS.gene74490:intron | 50.0% | |
ATCTTCGGCTTCTCCTCGAA+TGG | - | chr5.2:10567926-10567945 | MS.gene74490:CDS | 50.0% | |
ATTGGAAGCTGCAAAAGCCG+AGG | - | chr5.2:10568546-10568565 | MS.gene74490:intron | 50.0% | |
CAAGGAGGAGGGACCATTAA+TGG | - | chr5.2:10568733-10568752 | MS.gene74490:intron | 50.0% | |
GAAGAATTGCGAATGGGAGG+AGG | - | chr5.2:10568568-10568587 | MS.gene74490:intron | 50.0% | |
GAAGCTTGGAGACCACAAAG+AGG | - | chr5.2:10571163-10571182 | MS.gene74490:CDS | 50.0% | |
GAGGAAGAATTGCGAATGGG+AGG | - | chr5.2:10568565-10568584 | MS.gene74490:intron | 50.0% | |
GAGTGCCTTCTGTTGGAAAC+AGG | + | chr5.2:10570072-10570091 | None:intergenic | 50.0% | |
GCAGCCTAACTTTGTCCCTT+TGG | + | chr5.2:10568000-10568019 | None:intergenic | 50.0% | |
GCAGGAGGAGGTTTAACCAA+AGG | - | chr5.2:10571061-10571080 | MS.gene74490:CDS | 50.0% | |
GCCGAGGAAGAATTGCGAAT+GGG | - | chr5.2:10568562-10568581 | MS.gene74490:intron | 50.0% | |
GGAGAAGGAGAAGAAAGAGG+AGG | - | chr5.2:10568043-10568062 | MS.gene74490:CDS | 50.0% | |
GGTCAACTCTTGTTGCGACT+TGG | + | chr5.2:10570547-10570566 | None:intergenic | 50.0% | |
TAACCAAAGGTGAGACCCCT+AGG | - | chr5.2:10571074-10571093 | MS.gene74490:CDS | 50.0% | |
TCAGCAGCTGACAAAGGAAG+AGG | + | chr5.2:10568997-10569016 | None:intergenic | 50.0% | |
TGCCTTCTGTTGGAAACAGG+AGG | + | chr5.2:10570069-10570088 | None:intergenic | 50.0% | |
! | CTAGGTGAGAAAGAAGGTGC+AGG | - | chr5.2:10571043-10571062 | MS.gene74490:CDS | 50.0% |
! | GGAGGAATGTCGCTTCATGA+TGG | + | chr5.2:10570051-10570070 | None:intergenic | 50.0% |
! | GGAGGTGTGTATGAAACAGC+AGG | - | chr5.2:10568061-10568080 | MS.gene74490:CDS | 50.0% |
!! | GGAGGTGTTGTTGAAGGACA+AGG | - | chr5.2:10568490-10568509 | MS.gene74490:intron | 50.0% |
!!! | TCTTTTTTTGGTGGTGGCCG+AGG | - | chr5.2:10569720-10569739 | MS.gene74490:intron | 50.0% |
AAGCCTAGGGGTCTCACCTT+TGG | + | chr5.2:10571080-10571099 | None:intergenic | 55.0% | |
CGATCAGGCAAGCCTCTTTG+TGG | + | chr5.2:10571178-10571197 | None:intergenic | 55.0% | |
GAATTGCGAATGGGAGGAGG+AGG | - | chr5.2:10568571-10568590 | MS.gene74490:intron | 55.0% | |
! | GAGAAAGAAGGTGCAGGAGG+AGG | - | chr5.2:10571049-10571068 | MS.gene74490:CDS | 55.0% |
! | GGTGAGAAAGAAGGTGCAGG+AGG | - | chr5.2:10571046-10571065 | MS.gene74490:CDS | 55.0% |
AAGGTCCGGGGTTCGAACCT+CGG | + | chr5.2:10569740-10569759 | None:intergenic | 60.0% | |
TTGCGAATGGGAGGAGGAGG+AGG | - | chr5.2:10568574-10568593 | MS.gene74490:intron | 60.0% | |
ATGGGAGGAGGAGGAGGAGG+AGG | - | chr5.2:10568580-10568599 | MS.gene74490:intron | 65.0% | |
CGAATGGGAGGAGGAGGAGG+AGG | - | chr5.2:10568577-10568596 | MS.gene74490:intron | 65.0% | |
GGAGGAGGAGGAGGAGATGG+TGG | - | chr5.2:10568604-10568623 | MS.gene74490:intron | 65.0% | |
GGAGGAGGAGGAGGAGGAGA+TGG | - | chr5.2:10568601-10568620 | MS.gene74490:intron | 65.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr5.2:10568583-10568602 | MS.gene74490:intron | 70.0% | |
GGTGGCCGAGGTTCGAACCC+CGG | - | chr5.2:10569732-10569751 | MS.gene74490:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 10567800 | 10571249 | 10567800 | ID=MS.gene74490 |
chr5.2 | mRNA | 10567800 | 10571249 | 10567800 | ID=MS.gene74490.t1;Parent=MS.gene74490 |
chr5.2 | exon | 10570008 | 10571249 | 10570008 | ID=MS.gene74490.t1.exon1;Parent=MS.gene74490.t1 |
chr5.2 | CDS | 10570008 | 10571249 | 10570008 | ID=cds.MS.gene74490.t1;Parent=MS.gene74490.t1 |
chr5.2 | exon | 10567800 | 10568186 | 10567800 | ID=MS.gene74490.t1.exon2;Parent=MS.gene74490.t1 |
chr5.2 | CDS | 10567800 | 10568186 | 10567800 | ID=cds.MS.gene74490.t1;Parent=MS.gene74490.t1 |
Gene Sequence |
Protein sequence |