AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050727

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050727.t1 MTR_7g117620 99.084 546 5 0 1 546 1 546 0.0 1112
MS.gene050727.t1 MTR_2g096190 57.036 533 207 6 32 546 16 544 0.0 570
MS.gene050727.t1 MTR_4g062100 56.226 530 219 7 30 546 17 546 0.0 549
MS.gene050727.t1 MTR_7g100390 54.789 522 221 7 36 546 3 520 0.0 525
MS.gene050727.t1 MTR_1g115575 45.126 554 260 8 23 546 54 593 3.59e-141 421
MS.gene050727.t1 MTR_1g032100 44.015 518 262 8 52 546 19 531 3.87e-136 405
MS.gene050727.t1 MTR_1g032100 32.778 180 116 3 48 227 96 270 3.89e-13 72.4
MS.gene050727.t1 MTR_8g105260 44.536 485 249 8 77 546 59 538 7.58e-129 387
MS.gene050727.t1 MTR_8g105260 32.222 180 117 3 48 227 103 277 5.55e-13 72.0
MS.gene050727.t1 MTR_7g100430 40.734 545 292 4 23 546 48 582 2.07e-117 359
MS.gene050727.t1 MTR_2g101320 27.237 503 288 10 44 478 71 563 2.64e-40 155
MS.gene050727.t1 MTR_2g101320 30.275 218 151 1 83 300 38 254 7.80e-15 77.8
MS.gene050727.t1 MTR_2g101310 25.779 578 341 16 41 544 68 631 6.93e-39 151
MS.gene050727.t1 MTR_2g101310 32.609 230 153 2 84 312 39 267 7.79e-17 84.3
MS.gene050727.t1 MTR_2g101310 32.432 259 164 4 41 295 68 319 3.39e-26 112
MS.gene050727.t1 MTR_2g101310 32.609 230 153 2 84 312 39 267 3.53e-16 81.6
MS.gene050727.t1 MTR_8g467780 24.485 437 256 12 119 519 46 444 5.76e-22 99.4
MS.gene050727.t1 MTR_8g039620 27.273 308 183 6 100 393 36 316 1.11e-21 98.2
MS.gene050727.t1 MTR_8g066670 24.286 490 292 15 66 519 1056 1502 1.73e-21 99.8
MS.gene050727.t1 MTR_8g073260 27.875 287 173 6 119 393 46 310 2.24e-21 97.4
MS.gene050727.t1 MTR_1g059930 28.125 288 171 7 119 393 47 311 5.31e-21 96.3
MS.gene050727.t1 MTR_7g451420 30.303 264 163 6 85 332 9 267 1.22e-20 93.2
MS.gene050727.t1 MTR_3g105650 23.936 376 229 10 119 475 40 377 2.38e-20 94.0
MS.gene050727.t1 MTR_3g085830 28.862 246 145 7 86 312 162 396 7.99e-20 93.6
MS.gene050727.t1 MTR_5g085810 25.577 477 255 17 55 486 264 685 5.71e-19 91.3
MS.gene050727.t1 MTR_3g016210 26.159 302 170 7 119 393 45 320 2.43e-18 88.2
MS.gene050727.t1 MTR_5g085830 24.439 446 273 14 75 486 242 657 2.92e-18 89.0
MS.gene050727.t1 MTR_8g080080 29.167 288 168 8 40 295 99 382 4.42e-18 88.2
MS.gene050727.t1 MTR_7g021090 28.959 221 141 3 119 327 44 260 9.04e-18 85.9
MS.gene050727.t1 MTR_8g072510 26.872 227 150 3 119 333 45 267 2.30e-17 85.1
MS.gene050727.t1 MTR_6g023070 30.693 303 173 11 17 291 23 316 2.60e-17 85.5
MS.gene050727.t1 MTR_2g096760 29.661 236 125 8 85 310 15 219 7.76e-17 83.6
MS.gene050727.t1 MTR_1g069110 24.194 434 241 17 78 476 9 389 1.41e-16 82.8
MS.gene050727.t1 MTR_8g062410 29.130 230 140 3 119 336 45 263 1.72e-16 82.4
MS.gene050727.t1 MTR_6g027840 30.830 253 150 5 78 310 207 454 2.81e-16 82.0
MS.gene050727.t1 MTR_6g027840 32.065 184 103 7 41 224 308 469 1.50e-11 67.4
MS.gene050727.t1 MTR_8g069880 20.538 409 265 8 119 501 42 416 2.89e-16 81.6
MS.gene050727.t1 MTR_6g022830 29.582 311 177 10 17 291 75 379 3.05e-16 82.4
MS.gene050727.t1 MTR_8g068990 25.597 293 169 6 119 397 47 304 3.61e-16 81.6
MS.gene050727.t1 MTR_7g099570 30.924 249 140 7 119 340 44 287 1.56e-15 80.1
MS.gene050727.t1 MTR_7g099570 28.571 196 126 4 112 297 5 196 4.83e-12 68.9
MS.gene050727.t1 MTR_5g085480 25.000 448 284 11 78 486 207 641 1.95e-15 80.1
MS.gene050727.t1 MTR_5g085480 26.708 322 169 14 40 302 86 399 2.94e-13 73.2
MS.gene050727.t1 MTR_4g063830 31.034 232 138 7 82 296 13 239 9.71e-15 77.0
MS.gene050727.t1 MTR_5g043640 38.621 145 82 6 181 320 50 192 1.41e-14 73.9
MS.gene050727.t1 MTR_5g043640 37.143 140 81 5 154 290 58 193 1.50e-14 73.9
MS.gene050727.t1 MTR_5g043640 31.868 182 117 6 77 256 50 226 5.43e-13 69.3
MS.gene050727.t1 MTR_8g040930 23.873 377 226 11 127 472 2 348 1.51e-14 75.9
MS.gene050727.t1 MTR_8g041240 23.873 377 226 11 127 472 2 348 1.51e-14 75.9
MS.gene050727.t1 MTR_8g056020 31.532 222 116 10 123 313 139 355 1.94e-13 72.4
MS.gene050727.t1 MTR_1g089180 31.122 196 116 6 103 297 240 417 4.50e-12 68.6
MS.gene050727.t1 MTR_5g026800 35.366 164 97 5 120 283 15 169 5.10e-12 67.0
MS.gene050727.t1 MTR_1g100797 31.955 266 146 12 50 297 17 265 6.03e-12 68.6
MS.gene050727.t1 MTR_7g099580 29.560 159 101 4 119 267 47 204 9.08e-12 67.0
MS.gene050727.t1 MTR_2g438740 22.892 498 277 16 43 495 111 546 1.23e-11 67.8
MS.gene050727.t1 MTR_4g021880 31.220 205 115 8 110 295 126 323 2.91e-11 65.9
MS.gene050727.t1 MTR_1g112830 29.474 190 131 3 121 310 140 326 3.24e-11 66.2
MS.gene050727.t1 MTR_4g021880 31.220 205 115 8 110 295 126 323 7.27e-11 65.1
MS.gene050727.t1 MTR_4g092760 32.308 130 85 3 147 275 32 159 9.99e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050727.t1 AT2G31820 74.054 555 134 5 1 546 109 662 0.0 822
MS.gene050727.t1 AT1G05640 71.020 559 149 6 1 546 69 627 0.0 790
MS.gene050727.t1 AT5G60070 56.900 529 207 8 35 546 24 548 0.0 561
MS.gene050727.t1 AT1G07710 57.358 530 211 5 31 546 15 543 0.0 550
MS.gene050727.t1 AT1G07710 57.358 530 211 5 31 546 15 543 0.0 550
MS.gene050727.t1 AT5G02620 50.287 523 242 6 35 546 9 524 4.69e-163 474
MS.gene050727.t1 AT5G02620 50.287 523 242 6 35 546 9 524 4.69e-163 474
MS.gene050727.t1 AT5G02620 50.287 523 242 6 35 546 9 524 4.69e-163 474
MS.gene050727.t1 AT5G02620 48.352 546 241 7 35 546 9 547 6.34e-158 462
MS.gene050727.t1 AT5G02620 48.352 546 241 7 35 546 9 547 6.34e-158 462
MS.gene050727.t1 AT3G12360 42.077 549 280 8 23 546 43 578 5.37e-127 384
MS.gene050727.t1 AT3G12360 42.077 549 280 8 23 546 55 590 7.59e-127 384
MS.gene050727.t1 AT2G01680 42.708 480 254 7 50 513 17 491 1.75e-123 373
MS.gene050727.t1 AT2G01680 28.796 191 131 2 47 237 98 283 9.57e-12 67.8
MS.gene050727.t1 AT3G09550 43.227 502 250 7 31 509 83 572 7.80e-119 364
MS.gene050727.t1 AT3G09550 43.227 502 250 7 31 509 76 565 8.63e-119 363
MS.gene050727.t1 AT3G09550 43.227 502 250 7 31 509 76 565 8.63e-119 363
MS.gene050727.t1 AT5G54710 28.797 507 326 13 43 534 102 588 1.46e-43 164
MS.gene050727.t1 AT5G54710 28.797 507 326 13 43 534 147 633 3.63e-43 163
MS.gene050727.t1 AT5G54710 25.000 312 179 11 43 317 18 311 9.18e-13 71.2
MS.gene050727.t1 AT1G34050 27.122 483 308 12 43 513 88 538 4.36e-38 148
MS.gene050727.t1 AT2G24600 25.773 485 319 15 43 502 71 539 1.35e-35 141
MS.gene050727.t1 AT2G24600 25.773 485 319 15 43 502 71 539 1.35e-35 141
MS.gene050727.t1 AT1G10340 25.470 479 313 13 46 498 74 534 2.20e-35 140
MS.gene050727.t1 AT1G10340 24.950 501 316 13 47 498 41 530 9.23e-35 138
MS.gene050727.t1 AT4G03500 26.539 471 317 9 43 493 113 574 3.15e-33 134
MS.gene050727.t1 AT4G03500 26.840 231 125 6 110 297 73 302 3.17e-12 69.7
MS.gene050727.t1 AT4G03500 26.539 471 317 9 43 493 113 574 3.15e-33 134
MS.gene050727.t1 AT4G03500 26.840 231 125 6 110 297 73 302 3.17e-12 69.7
MS.gene050727.t1 AT4G03500 26.539 471 317 9 43 493 136 597 3.29e-33 134
MS.gene050727.t1 AT4G03500 26.840 231 125 6 110 297 96 325 3.33e-12 69.7
MS.gene050727.t1 AT5G50140 26.389 504 303 20 33 498 17 490 2.07e-29 122
MS.gene050727.t1 AT1G03670 24.520 469 288 9 41 478 144 577 1.70e-27 117
MS.gene050727.t1 AT1G03670 29.293 198 133 3 108 298 64 261 1.05e-14 77.4
MS.gene050727.t1 AT4G03480 28.457 376 220 10 78 435 309 653 1.75e-26 114
MS.gene050727.t1 AT4G03480 24.333 300 187 8 31 297 140 432 1.79e-13 73.6
MS.gene050727.t1 AT4G03480 28.457 376 220 10 78 435 312 656 1.93e-26 114
MS.gene050727.t1 AT4G03480 24.092 303 187 8 31 297 140 435 4.49e-13 72.4
MS.gene050727.t1 AT4G03470 26.494 502 311 14 43 532 201 656 6.20e-26 112
MS.gene050727.t1 AT4G03460 25.659 417 280 10 43 435 82 492 7.07e-25 109
MS.gene050727.t1 AT4G03460 25.659 417 280 10 43 435 114 524 9.15e-25 108
MS.gene050727.t1 AT4G03460 26.692 266 169 8 50 297 53 310 2.54e-13 73.2
MS.gene050727.t1 AT4G14390 25.370 540 318 13 43 512 113 637 2.26e-24 107
MS.gene050727.t1 AT4G14390 25.370 540 318 13 43 512 132 656 2.86e-24 107
MS.gene050727.t1 AT4G03490 25.536 466 301 13 43 501 144 570 5.37e-24 107
MS.gene050727.t1 AT4G03490 25.536 466 301 13 43 501 144 570 5.45e-24 106
MS.gene050727.t1 AT4G03490 25.536 466 301 13 43 501 134 560 6.16e-24 106
MS.gene050727.t1 AT5G54700 27.457 346 174 11 170 497 17 303 8.46e-24 103
MS.gene050727.t1 AT4G14390 25.508 541 317 14 43 512 132 657 1.56e-23 105
MS.gene050727.t1 AT4G10720 25.281 356 226 8 119 455 40 374 2.32e-22 100
MS.gene050727.t1 AT4G03490 22.338 479 316 11 42 501 71 512 3.18e-22 101
MS.gene050727.t1 AT4G03490 22.338 479 316 11 42 501 81 522 3.81e-22 100
MS.gene050727.t1 AT4G10720 27.027 296 182 5 119 398 40 317 9.23e-21 95.5
MS.gene050727.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.50e-20 95.9
MS.gene050727.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
MS.gene050727.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.50e-20 95.9
MS.gene050727.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
MS.gene050727.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.50e-20 95.9
MS.gene050727.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
MS.gene050727.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.50e-20 95.9
MS.gene050727.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
MS.gene050727.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.50e-20 95.9
MS.gene050727.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
MS.gene050727.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.50e-20 95.9
MS.gene050727.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
MS.gene050727.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.50e-20 95.9
MS.gene050727.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
MS.gene050727.t1 AT4G03450 26.923 494 285 19 42 485 104 571 2.03e-20 95.5
MS.gene050727.t1 AT4G03450 27.255 499 277 20 42 485 104 571 3.60e-20 94.7
MS.gene050727.t1 AT2G24600 24.839 467 284 16 43 485 71 494 7.28e-20 93.6
MS.gene050727.t1 AT2G24600 24.839 467 284 16 43 485 71 494 7.28e-20 93.6
MS.gene050727.t1 AT4G03440 24.838 463 282 14 69 510 260 677 1.19e-19 93.2
MS.gene050727.t1 AT4G03440 25.085 295 193 9 31 302 108 397 4.22e-12 69.3
MS.gene050727.t1 AT4G03440 24.838 463 282 14 69 510 253 670 1.41e-19 93.2
MS.gene050727.t1 AT4G03440 25.085 295 193 9 31 302 101 390 4.62e-12 69.3
MS.gene050727.t1 AT4G03440 24.838 463 282 14 69 510 253 670 1.41e-19 93.2
MS.gene050727.t1 AT4G03440 25.085 295 193 9 31 302 101 390 4.62e-12 69.3
MS.gene050727.t1 AT4G14400 25.490 459 295 10 69 512 139 565 1.50e-19 92.8
MS.gene050727.t1 AT4G14400 25.490 459 295 10 69 512 139 565 1.50e-19 92.8
MS.gene050727.t1 AT4G14400 25.490 459 295 10 69 512 205 631 1.69e-19 92.8
MS.gene050727.t1 AT3G01750 31.271 291 162 9 43 299 105 391 6.83e-19 90.9
MS.gene050727.t1 AT3G01750 31.271 291 162 9 43 299 105 391 6.83e-19 90.9
MS.gene050727.t1 AT5G15500 26.460 291 180 5 119 393 41 313 2.08e-17 85.5
MS.gene050727.t1 AT5G51160 25.846 325 197 10 147 438 44 357 6.88e-17 83.6
MS.gene050727.t1 AT1G14500 28.632 234 150 3 119 335 40 273 7.44e-16 80.5
MS.gene050727.t1 AT5G54700 25.434 346 190 12 181 497 34 340 8.04e-16 80.5
MS.gene050727.t1 AT3G04140 27.055 292 170 6 43 295 102 389 1.02e-15 80.9
MS.gene050727.t1 AT2G03430 38.571 140 80 5 181 316 43 180 5.58e-15 75.1
MS.gene050727.t1 AT2G03430 31.579 190 123 6 77 264 43 227 5.08e-13 69.3
MS.gene050727.t1 AT2G03430 39.437 142 75 6 154 290 51 186 3.29e-12 67.0
MS.gene050727.t1 AT4G14390 24.762 420 235 11 43 392 113 521 7.96e-15 77.8
MS.gene050727.t1 AT5G54620 28.205 234 153 3 117 335 38 271 1.01e-14 77.0
MS.gene050727.t1 AT5G54610 27.895 190 127 2 119 298 40 229 2.22e-14 75.9
MS.gene050727.t1 AT5G54610 28.638 213 137 5 68 267 22 232 4.50e-12 68.6
MS.gene050727.t1 AT1G14480 23.636 385 236 8 119 448 40 421 2.50e-14 75.9
MS.gene050727.t1 AT2G28840 32.487 197 100 5 120 310 50 219 4.95e-14 74.7
MS.gene050727.t1 AT3G04710 31.925 213 136 6 110 320 49 254 1.85e-12 70.1
MS.gene050727.t1 AT4G19150 30.460 174 84 3 120 293 20 156 2.84e-12 67.4
MS.gene050727.t1 AT3G04710 31.683 202 130 5 110 310 49 243 3.62e-11 65.9
MS.gene050727.t1 AT5G57740 30.374 214 110 8 119 296 54 264 4.01e-11 65.9
MS.gene050727.t1 AT3G04710 31.683 202 130 5 110 310 273 467 4.37e-11 66.2

Find 132 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGGCATTATTCATTTCTT+TGG 0.247268 7.3:-48051 MS.gene050727:CDS
GAAGGGATCATAACCATTTC+TGG 0.256676 7.3:+52118 None:intergenic
AGGATCCAAGCACCGGATTT+AGG 0.271641 7.3:-51750 MS.gene050727:CDS
TGACGTCGTGAATCTCCTTT+TGG 0.292532 7.3:-51878 MS.gene050727:CDS
TTTAGTTGCTTTGCTGCATT+TGG 0.317628 7.3:+48365 None:intergenic
CCTTCACTCTGCGGCTAGAA+TGG 0.320595 7.3:-51806 MS.gene050727:CDS
CAAGAGGATGTACGCACTTT+AGG 0.320769 7.3:-47703 None:intergenic
TTCTGAGAACGGACATGATT+TGG 0.325398 7.3:-52192 MS.gene050727:CDS
GCTTGGATCCTTGCTTAATA+AGG 0.329121 7.3:+51762 None:intergenic
AGCCCCAGCATCCCTCATTA+TGG 0.329160 7.3:+48415 None:intergenic
TGCGGCTAGAATGGGGCATT+TGG 0.335820 7.3:-51797 MS.gene050727:CDS
TAACATCAATGCTACTAATA+AGG 0.340466 7.3:-48492 MS.gene050727:CDS
CTTCACTCTGCGGCTAGAAT+GGG 0.352049 7.3:-51805 MS.gene050727:CDS
GACAGTCTTACCATTGTTCC+TGG 0.365757 7.3:+51828 None:intergenic
TTAAATCTAGAGGATAATAA+AGG 0.376597 7.3:-51634 MS.gene050727:CDS
GGAGAGGCGGCTGAGCTTCA+TGG 0.379563 7.3:-52393 MS.gene050727:CDS
GCTTCTATTGTCGCCAGAAA+TGG 0.381329 7.3:-52131 MS.gene050727:CDS
TTCATTTAGCTGCTCGGGCT+GGG 0.381699 7.3:-52316 MS.gene050727:CDS
TATGTTGAAGAGAAAGTAAA+TGG 0.386691 7.3:-48140 MS.gene050727:CDS
CTGCATTTGGAGGTTTCCCT+TGG 0.389760 7.3:+48378 None:intergenic
TTCTCTCACTTACGTGGTAG+TGG 0.396214 7.3:-47910 MS.gene050727:CDS
TCTGGACCCTCATGCCCGTC+TGG 0.398040 7.3:+48288 None:intergenic
CTTCCATGTTGCTGCAAAGC+AGG 0.398447 7.3:-52099 MS.gene050727:CDS
CAGAGGTAATCGCATTGTTC+AGG 0.401763 7.3:+48228 None:intergenic
GTCTCCATAATGAGGGATGC+TGG 0.403600 7.3:-48419 MS.gene050727:CDS
TGCAAAGAAGGGCCGTAATC+AGG 0.408212 7.3:-51590 MS.gene050727:intron
ATTCATTTAGCTGCTCGGGC+TGG 0.412041 7.3:-52317 MS.gene050727:CDS
TACCGATTCATTTAGCTGCT+CGG 0.412349 7.3:-52322 MS.gene050727:CDS
GCTATATATGCTACAGTGAT+TGG 0.413428 7.3:-47867 MS.gene050727:CDS
AGTTGTTGTGATTGAGCAAA+AGG 0.415505 7.3:-48006 MS.gene050727:CDS
TGCCCGTCTGGCGTGTCTGT+TGG 0.420613 7.3:+48300 None:intergenic
AGTTGCTTTGCTGCATTTGG+AGG 0.423178 7.3:+48368 None:intergenic
CTCATTATGGAGACAAGATC+TGG 0.425108 7.3:+48428 None:intergenic
TTCTCAGAAGCGACGTAAAG+AGG 0.435647 7.3:+52206 None:intergenic
AGATTTAAAACTGCTCGGTC+AGG 0.438182 7.3:+51649 None:intergenic
ACCGATTCATTTAGCTGCTC+GGG 0.450097 7.3:-52321 MS.gene050727:CDS
TCTCCATAATGAGGGATGCT+GGG 0.451849 7.3:-48418 MS.gene050727:CDS
TTTCTCTTCAACATATTGAC+CGG 0.455311 7.3:+48148 None:intergenic
CATTGTTCAGGCCACTTATG+TGG 0.455464 7.3:+48240 None:intergenic
ATTGCATATTGCTGCAAAGA+AGG 0.465601 7.3:-51602 MS.gene050727:CDS
CATGGAGAAAGAACGGCTTT+CGG 0.467112 7.3:+47764 None:intergenic
CATTAACAAGCTCATGTGGC+TGG 0.467378 7.3:-47961 MS.gene050727:CDS
ACAAGTCCTTTGCTGCCTCA+TGG 0.467607 7.3:+52258 None:intergenic
GCCCGAGCAGCTAAATGAAT+CGG 0.469940 7.3:+52320 None:intergenic
TGAGGCAGCAAAGGACTTGT+TGG 0.470727 7.3:-52255 MS.gene050727:CDS
CTGGCGTGTCTGTTGGAGTT+GGG 0.471422 7.3:+48307 None:intergenic
TCTGTAGTCATGGCCAAGTT+GGG 0.474009 7.3:+51949 None:intergenic
TGAAAGCAATGGAAATGAAA+AGG 0.475216 7.3:+47934 None:intergenic
TAGCGAGATACTCAAATACT+TGG 0.475702 7.3:-52165 MS.gene050727:CDS
TCTCAGAAGCGACGTAAAGA+GGG 0.479972 7.3:+52207 None:intergenic
GCAGCCATCTTCACTGTCCC+CGG 0.481349 7.3:-48167 MS.gene050727:CDS
ATCTGTAGTCATGGCCAAGT+TGG 0.490000 7.3:+51948 None:intergenic
GAGAGGCGGCTGAGCTTCAT+GGG 0.500901 7.3:-52392 MS.gene050727:CDS
TCAGTCCTAAATCCGGTGCT+TGG 0.504143 7.3:+51745 None:intergenic
TCTGGCGTGTCTGTTGGAGT+TGG 0.506059 7.3:+48306 None:intergenic
TTTCTTATCAGTCCTAAATC+CGG 0.506072 7.3:+51738 None:intergenic
CACTACACATGGCTGTGAAA+GGG 0.507134 7.3:-51705 MS.gene050727:CDS
TAAAAGCAAACACCTGATTA+CGG 0.507872 7.3:+51578 None:intergenic
GCTGCAAAGCAGGGTCATCT+TGG 0.508636 7.3:-52089 MS.gene050727:intron
TTGATAATGCTCTCTACAAT+CGG 0.508727 7.3:-47840 MS.gene050727:CDS
CAGATCTTGTCTCCATAATG+AGG 0.509836 7.3:-48427 MS.gene050727:CDS
ATTTGGAGGTTTCCCTTGGT+CGG 0.511494 7.3:+48382 None:intergenic
GGATAGATGCGACAAAATTG+AGG 0.514019 7.3:-47788 MS.gene050727:CDS
CTTTACGTCGCTTCTGAGAA+CGG 0.514029 7.3:-52203 MS.gene050727:CDS
TGTGTGTAAAGCAGTTGAAT+TGG 0.520334 7.3:+51921 None:intergenic
CTGAAGAAACTCCACATAAG+TGG 0.520816 7.3:-48251 MS.gene050727:CDS
CTCCAACAGACACGCCAGAC+GGG 0.522130 7.3:-48302 MS.gene050727:CDS
ATCAATGCTACTAATAAGGC+GGG 0.522866 7.3:-48488 MS.gene050727:CDS
GGTAAGTCGCCACGTTTCCC+AGG 0.525989 7.3:+52341 None:intergenic
CCTCTAGATTTAAAACTGCT+CGG 0.526757 7.3:+51644 None:intergenic
ATTCATTTCTTTGGCTGTCG+TGG 0.528156 7.3:-48042 MS.gene050727:CDS
GCACTACACATGGCTGTGAA+AGG 0.531620 7.3:-51706 MS.gene050727:CDS
ATTCACCGTTCAAAATCTCC+TGG 0.533489 7.3:+47727 None:intergenic
GGTTTGAATCTGATTCCAAA+AGG 0.544875 7.3:+51863 None:intergenic
TTGACCGGGGACAGTGAAGA+TGG 0.544944 7.3:+48163 None:intergenic
AAGAAGAGCAAGGAATCACC+TGG 0.548629 7.3:-52359 MS.gene050727:CDS
CTGCTTTGCAGCAACATGGA+AGG 0.550006 7.3:+52100 None:intergenic
TTAAGCAAGGATCCAAGCAC+CGG 0.551434 7.3:-51757 MS.gene050727:CDS
TTGCATATTGCTGCAAAGAA+GGG 0.553144 7.3:-51601 MS.gene050727:CDS
AAGTGAGAGGAAGAAGAGCA+AGG 0.553626 7.3:-52369 MS.gene050727:CDS
TCTCTCACTTACGTGGTAGT+GGG 0.555983 7.3:-47909 MS.gene050727:CDS
TTCTCTTCAACATATTGACC+GGG 0.561606 7.3:+48149 None:intergenic
AACAGCAACAACAGTAGCAG+AGG 0.562112 7.3:+48211 None:intergenic
GATAGATGCGACAAAATTGA+GGG 0.562454 7.3:-47787 MS.gene050727:CDS
TGCTTTGCAGCAACATGGAA+GGG 0.565820 7.3:+52101 None:intergenic
TTCCATGTTGCTGCAAAGCA+GGG 0.566001 7.3:-52098 MS.gene050727:CDS
CCAAAGAAATGAATAATGCC+AGG 0.566227 7.3:+48051 None:intergenic
TGTGAAAGCCTTATTAAGCA+AGG 0.568297 7.3:-51770 MS.gene050727:CDS
TGGAGGTTTCCCTTGGTCGG+TGG 0.569501 7.3:+48385 None:intergenic
CATTTCTTTGGCTGTCGTGG+TGG 0.572639 7.3:-48039 MS.gene050727:CDS
GACCCTGCTTTGCAGCAACA+TGG 0.573006 7.3:+52096 None:intergenic
TTGTCATTAACAAGCTCATG+TGG 0.574156 7.3:-47965 MS.gene050727:CDS
CCATTCTAGCCGCAGAGTGA+AGG 0.575265 7.3:+51806 None:intergenic
TCAAAACCATGAGGCAGCAA+AGG 0.578528 7.3:-52264 MS.gene050727:CDS
CGCCGCTTGTTATCAACGGA+GGG 0.579660 7.3:-48518 MS.gene050727:CDS
CTCCATAATGAGGGATGCTG+GGG 0.582844 7.3:-48417 MS.gene050727:CDS
AGACACGCCAGACGGGCATG+AGG 0.585010 7.3:-48295 MS.gene050727:CDS
TTCACTCTGCGGCTAGAATG+GGG 0.586636 7.3:-51804 MS.gene050727:CDS
AGTGAGAGAAATGAAAGCAA+TGG 0.588483 7.3:+47923 None:intergenic
GCTGTTAATTCCACCGACCA+AGG 0.589761 7.3:-48395 MS.gene050727:CDS
CTGGTCTGATGTATGCGACA+TGG 0.589809 7.3:+47746 None:intergenic
ATTGGACAAATCTGTAGTCA+TGG 0.593370 7.3:+51939 None:intergenic
TTGGCAAAGCAGAACCTCGA+GGG 0.594567 7.3:-52236 MS.gene050727:CDS
AGGTCAAACTGCACTACACA+TGG 0.594858 7.3:-51716 MS.gene050727:CDS
CAGAATGACACAATAGCACA+TGG 0.602461 7.3:+47815 None:intergenic
TAGTGGGATCACACTCAAGA+TGG 0.606515 7.3:-47893 MS.gene050727:CDS
CATCAATGCTACTAATAAGG+CGG 0.608173 7.3:-48489 MS.gene050727:CDS
GACACGCCAGACGGGCATGA+GGG 0.616315 7.3:-48294 MS.gene050727:CDS
CATGTCGCATACATCAGACC+AGG 0.620062 7.3:-47745 MS.gene050727:CDS
AGATCTTGTCTCCATAATGA+GGG 0.621157 7.3:-48426 MS.gene050727:CDS
CTCAGAAGCGACGTAAAGAG+GGG 0.621468 7.3:+52208 None:intergenic
TACCCTCCGTTGATAACAAG+CGG 0.621861 7.3:+48516 None:intergenic
CTGTTAATTCCACCGACCAA+GGG 0.622584 7.3:-48394 MS.gene050727:CDS
GGATTTAGGACTGATAAGAA+AGG 0.622915 7.3:-51736 MS.gene050727:CDS
CCGCCGCTTGTTATCAACGG+AGG 0.624596 7.3:-48519 MS.gene050727:CDS
ACTCCAACAGACACGCCAGA+CGG 0.625293 7.3:-48303 MS.gene050727:CDS
TATGCGACATGGAGAAAGAA+CGG 0.627806 7.3:+47757 None:intergenic
TTCGCGTTGTCATGGAGAGG+CGG 0.633268 7.3:-52406 MS.gene050727:CDS
TTACACACAGCTGCTACACA+AGG 0.643360 7.3:-51907 MS.gene050727:CDS
TTTCATTTCTCTCACTTACG+TGG 0.645638 7.3:-47916 MS.gene050727:CDS
TGTCCGCCGCTTGTTATCAA+CGG 0.646577 7.3:-48522 MS.gene050727:CDS
AAGGAATCACCTGGGAAACG+TGG 0.653514 7.3:-52350 MS.gene050727:CDS
TGAGCTTCATGGGAAGTGAG+AGG 0.657665 7.3:-52382 MS.gene050727:CDS
TGGCAAAGCAGAACCTCGAG+GGG 0.666459 7.3:-52235 MS.gene050727:CDS
GCTATTGTGTCATTCTGCAT+AGG 0.668692 7.3:-47809 MS.gene050727:CDS
GTTGGCAAAGCAGAACCTCG+AGG 0.692209 7.3:-52237 MS.gene050727:CDS
AGAAGAGCAAGGAATCACCT+GGG 0.695083 7.3:-52358 MS.gene050727:CDS
TCTCTTCAACATATTGACCG+GGG 0.706481 7.3:+48150 None:intergenic
TAAGACTGTCCTTCACTCTG+CGG 0.709234 7.3:-51815 MS.gene050727:CDS
GATACTACTTCAAAACCATG+AGG 0.726605 7.3:-52273 MS.gene050727:CDS
GGCAAAGCAGAACCTCGAGG+GGG 0.735780 7.3:-52234 MS.gene050727:CDS
CCTCCGTTGATAACAAGCGG+CGG 0.744744 7.3:+48519 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAGACTT+AGG + chr7.3:50857-50876 None:intergenic 10.0%
!! ATTAATTCATTATTTATTGT+TGG - chr7.3:51379-51398 MS.gene050727:intron 10.0%
!! TATATATATATATATATCGT+AGG - chr7.3:50288-50307 MS.gene050727:intron 10.0%
!!! AAGTCTTTTTTTTTTTTTTT+TGG - chr7.3:50857-50876 MS.gene050727:intron 10.0%
!! AATTGCATTCATATTTATTA+TGG - chr7.3:50380-50399 MS.gene050727:intron 15.0%
!! ATAACATAAGAGAAATATAT+AGG + chr7.3:49586-49605 None:intergenic 15.0%
!! ATGAATTAATAAGTAAGTAA+AGG + chr7.3:51369-51388 None:intergenic 15.0%
!! TAACATAAGAGAAATATATA+GGG + chr7.3:49585-49604 None:intergenic 15.0%
!! TCAAATTATCATAATTCATA+TGG + chr7.3:51119-51138 None:intergenic 15.0%
!!! AAACATAAGAATTTTAACTT+GGG - chr7.3:49754-49773 MS.gene050727:intron 15.0%
!!! ATATTTTCATATAGCAATAA+TGG + chr7.3:49835-49854 None:intergenic 15.0%
!!! ATTATAATTCGTTTTATCTT+AGG - chr7.3:50326-50345 MS.gene050727:intron 15.0%
!!! TCTCAATAATTAGTTTATAA+AGG + chr7.3:48654-48673 None:intergenic 15.0%
!! AACAAAATGAATAACAAAGA+GGG + chr7.3:49658-49677 None:intergenic 20.0%
!! AACATAAGAGAAATATATAG+GGG + chr7.3:49584-49603 None:intergenic 20.0%
!! AACATTAATGAATCCTTAAT+CGG - chr7.3:51060-51079 MS.gene050727:intron 20.0%
!! TAAAAGAACAAAAAATGATG+TGG + chr7.3:51226-51245 None:intergenic 20.0%
!! TATCAAACACAAAAAATATC+AGG + chr7.3:52087-52106 None:intergenic 20.0%
!! TATGTCTATAATAATGTCTT+CGG - chr7.3:49257-49276 MS.gene050727:intron 20.0%
!! TTAAATCTAGAGGATAATAA+AGG - chr7.3:48525-48544 MS.gene050727:CDS 20.0%
!!! CCAAAAAAGTATATTAACAA+TGG + chr7.3:50607-50626 None:intergenic 20.0%
!!! CCATTGTTAATATACTTTTT+TGG - chr7.3:50604-50623 MS.gene050727:intron 20.0%
!!! GAAACATAAGAATTTTAACT+TGG - chr7.3:49753-49772 MS.gene050727:intron 20.0%
!!! GATTCATTAATGTTTTTCAT+AGG + chr7.3:51054-51073 None:intergenic 20.0%
!!! TCATTTTTTCACTTTTAAGT+TGG - chr7.3:50466-50485 MS.gene050727:intron 20.0%
!!! TTTCAATATTTATTCTGAAG+TGG - chr7.3:51596-51615 MS.gene050727:CDS 20.0%
!!! TTTTGTTCTTTTAATTAACC+AGG - chr7.3:51233-51252 MS.gene050727:intron 20.0%
! AAAAAAAAAAGACTTAGGAG+AGG + chr7.3:50852-50871 None:intergenic 25.0%
! AAATTATGGGTTTCTTACAT+GGG + chr7.3:49064-49083 None:intergenic 25.0%
! ACATAAGAGAAATATATAGG+GGG + chr7.3:49583-49602 None:intergenic 25.0%
! AGAAACAACTATATAGAAGA+AGG - chr7.3:49394-49413 MS.gene050727:intron 25.0%
! AGAAATCAGACTGATATTAA+AGG - chr7.3:49329-49348 MS.gene050727:intron 25.0%
! AGTTTACAATGTAGAAAAGA+TGG - chr7.3:48831-48850 MS.gene050727:intron 25.0%
! ATAAGAACAAGTATTAGACA+TGG + chr7.3:48711-48730 None:intergenic 25.0%
! ATGGTTATTGAAAAAACCAT+GGG - chr7.3:49185-49204 MS.gene050727:intron 25.0%
! ATTAGTTAGTATCCTTACTT+TGG - chr7.3:51190-51209 MS.gene050727:intron 25.0%
! CATAACTGTAAGTCATATTA+TGG - chr7.3:48791-48810 MS.gene050727:intron 25.0%
! GAACAAAATGAATAACAAAG+AGG + chr7.3:49659-49678 None:intergenic 25.0%
! TAAAAAACCCATTGATCATT+GGG + chr7.3:48992-49011 None:intergenic 25.0%
! TAACATCAATGCTACTAATA+AGG - chr7.3:51667-51686 MS.gene050727:CDS 25.0%
! TACATGAACAAAAAAAGTGA+TGG + chr7.3:50934-50953 None:intergenic 25.0%
! TATGTTGAAGAGAAAGTAAA+TGG - chr7.3:52019-52038 MS.gene050727:intron 25.0%
! TTCTTTCTTATGGCATTAAT+TGG - chr7.3:50974-50993 MS.gene050727:intron 25.0%
!! ATGTTTTTCATAGGAATTGA+TGG + chr7.3:51045-51064 None:intergenic 25.0%
!! TACAGTTATGCTTCTATTTT+AGG + chr7.3:48781-48800 None:intergenic 25.0%
!! TCAGTCTATTTTCTTTCTTA+TGG - chr7.3:50964-50983 MS.gene050727:intron 25.0%
!!! TCTTTTGAAGTTTGATTTCT+TGG - chr7.3:51086-51105 MS.gene050727:intron 25.0%
AAAAATCACAATGCAAGACA+AGG + chr7.3:51524-51543 None:intergenic 30.0%
AAAATCACAATGCAAGACAA+GGG + chr7.3:51523-51542 None:intergenic 30.0%
AAAATGAATAACAAAGAGGG+AGG + chr7.3:49655-49674 None:intergenic 30.0%
AAAATTACTCTCCACTATCT+TGG + chr7.3:51574-51593 None:intergenic 30.0%
AAATGAATAACAAAGAGGGA+GGG + chr7.3:49654-49673 None:intergenic 30.0%
AACGAAGTAGAAAACTATTG+TGG + chr7.3:50757-50776 None:intergenic 30.0%
ACAAAAAATATCAGGAAAGC+TGG + chr7.3:52079-52098 None:intergenic 30.0%
ACAAATTCAGAGTTCAGATT+TGG + chr7.3:51313-51332 None:intergenic 30.0%
AGAAAAAAAGAATCTTGCAG+AGG - chr7.3:48161-48180 MS.gene050727:CDS 30.0%
AGTCTGATTTCTATCTAATG+GGG + chr7.3:49321-49340 None:intergenic 30.0%
ATAAAAGCTCCGATCTTATT+TGG - chr7.3:51006-51025 MS.gene050727:intron 30.0%
ATAGAAAATACTGCACATGA+TGG + chr7.3:49122-49141 None:intergenic 30.0%
CAACTATATAGAAGAAGGAA+TGG - chr7.3:49399-49418 MS.gene050727:intron 30.0%
CAGTCTGATTTCTATCTAAT+GGG + chr7.3:49322-49341 None:intergenic 30.0%
CATGGTTATTGAAAAAACCA+TGG - chr7.3:49184-49203 MS.gene050727:intron 30.0%
CATGTGAGAAATTAGCATTT+GGG + chr7.3:49535-49554 None:intergenic 30.0%
CGGAATCAATAGAACAATTT+GGG - chr7.3:49095-49114 MS.gene050727:intron 30.0%
CTAAAAAACCCATTGATCAT+TGG + chr7.3:48993-49012 None:intergenic 30.0%
CTAGAGAAACCAAATAAGAT+CGG + chr7.3:51018-51037 None:intergenic 30.0%
CTTGACATTGCAGAAAAATT+TGG - chr7.3:51704-51723 MS.gene050727:CDS 30.0%
GAAATTATGGGTTTCTTACA+TGG + chr7.3:49065-49084 None:intergenic 30.0%
TAAAAGCAAACACCTGATTA+CGG + chr7.3:48584-48603 None:intergenic 30.0%
TCAGTCTGATTTCTATCTAA+TGG + chr7.3:49323-49342 None:intergenic 30.0%
TGAAAGCAATGGAAATGAAA+AGG + chr7.3:52228-52247 None:intergenic 30.0%
TTACAATGTAGAAAAGATGG+TGG - chr7.3:48834-48853 MS.gene050727:intron 30.0%
TTCACCTACAATTGATCATT+GGG + chr7.3:48924-48943 None:intergenic 30.0%
TTTACTCTATCCATCTTGTA+AGG + chr7.3:49444-49463 None:intergenic 30.0%
TTTAGTTGAAAATAACCCCA+AGG + chr7.3:49793-49812 None:intergenic 30.0%
TTTCTCTTCAACATATTGAC+CGG + chr7.3:52014-52033 None:intergenic 30.0%
TTTCTTATCAGTCCTAAATC+CGG + chr7.3:48424-48443 None:intergenic 30.0%
! AAAGTAAATGGCTTTTCACT+TGG - chr7.3:52031-52050 MS.gene050727:intron 30.0%
! AATTTCTCACATGCCTTTTA+CGG - chr7.3:49542-49561 MS.gene050727:intron 30.0%
! AGCATCACTATTTTCAACTT+AGG + chr7.3:51145-51164 None:intergenic 30.0%
! CAGTATTTTCTATTTAGTCG+TGG - chr7.3:49129-49148 MS.gene050727:intron 30.0%
! CTTCAAAAGAATACCGATTA+AGG + chr7.3:51076-51095 None:intergenic 30.0%
! GAAGTTTGATTTCTTGGTTA+AGG - chr7.3:51092-51111 MS.gene050727:intron 30.0%
! GCAAAATGAAGAAATTTTGC+TGG - chr7.3:48476-48495 MS.gene050727:CDS 30.0%
! TGAAGAAATTTTGCTGGAAT+TGG - chr7.3:48482-48501 MS.gene050727:CDS 30.0%
!! CCAAATTGTTCTATTGATTC+CGG + chr7.3:49097-49116 None:intergenic 30.0%
!! TAAAGTTGATACCAAGATAG+TGG - chr7.3:51560-51579 MS.gene050727:intron 30.0%
!! TTGATAATGCTCTCTACAAT+CGG - chr7.3:52319-52338 MS.gene050727:CDS 30.0%
!!! ATTTTTTGTGTTTGATAGCC+TGG - chr7.3:52090-52109 MS.gene050727:CDS 30.0%
!!! CTGCAAGATTCTTTTTTTCT+CGG + chr7.3:48161-48180 None:intergenic 30.0%
!!! GGTTTTTTCAATAACCATGA+TGG + chr7.3:49183-49202 None:intergenic 30.0%
AAAAAAAGTGATGGCATCCA+AGG + chr7.3:50925-50944 None:intergenic 35.0%
AAATCACAATGCAAGACAAG+GGG + chr7.3:51522-51541 None:intergenic 35.0%
AAGAGAAATATATAGGGGGA+AGG + chr7.3:49579-49598 None:intergenic 35.0%
AATAACCACCCAATGATCAA+TGG - chr7.3:48913-48932 MS.gene050727:intron 35.0%
AATGAATAACAAAGAGGGAG+GGG + chr7.3:49653-49672 None:intergenic 35.0%
AGAGAAATATATAGGGGGAA+GGG + chr7.3:49578-49597 None:intergenic 35.0%
AGATCTTGTCTCCATAATGA+GGG - chr7.3:51733-51752 MS.gene050727:CDS 35.0%
AGGGATTTCACTTTAACAAG+CGG - chr7.3:49370-49389 MS.gene050727:intron 35.0%
AGTAGTAGGTATAAGTTCCT+TGG - chr7.3:50905-50924 MS.gene050727:intron 35.0%
AGTGAGAGAAATGAAAGCAA+TGG + chr7.3:52239-52258 None:intergenic 35.0%
AGTTGTTGTGATTGAGCAAA+AGG - chr7.3:52153-52172 MS.gene050727:CDS 35.0%
ATAACCACCCAATGATCAAT+GGG - chr7.3:48914-48933 MS.gene050727:intron 35.0%
ATCAATGCTACTAATAAGGC+GGG - chr7.3:51671-51690 MS.gene050727:CDS 35.0%
ATTGCATATTGCTGCAAAGA+AGG - chr7.3:48557-48576 MS.gene050727:intron 35.0%
ATTGGACAAATCTGTAGTCA+TGG + chr7.3:48223-48242 None:intergenic 35.0%
CAATTGTAGGTGAACATGAA+TGG - chr7.3:48930-48949 MS.gene050727:intron 35.0%
CAGTAAAAACTACTTGCCTA+TGG - chr7.3:50034-50053 MS.gene050727:intron 35.0%
CATCAATGCTACTAATAAGG+CGG - chr7.3:51670-51689 MS.gene050727:CDS 35.0%
CCAAAGAAATGAATAATGCC+AGG + chr7.3:52111-52130 None:intergenic 35.0%
CCGGAATCAATAGAACAATT+TGG - chr7.3:49094-49113 MS.gene050727:intron 35.0%
CCTGGCATTATTCATTTCTT+TGG - chr7.3:52108-52127 MS.gene050727:CDS 35.0%
CTACTCAAACCAGAGATAAA+TGG + chr7.3:50890-50909 None:intergenic 35.0%
GAAAATTCAATAGTCGAGGA+TGG + chr7.3:50655-50674 None:intergenic 35.0%
GATACTACTTCAAAACCATG+AGG - chr7.3:47886-47905 MS.gene050727:CDS 35.0%
GATAGATGCGACAAAATTGA+GGG - chr7.3:52372-52391 MS.gene050727:CDS 35.0%
GCATGTGAGAAATTAGCATT+TGG + chr7.3:49536-49555 None:intergenic 35.0%
GCTATATATGCTACAGTGAT+TGG - chr7.3:52292-52311 MS.gene050727:CDS 35.0%
GGAAATACATTGCCAAAGTA+AGG + chr7.3:51205-51224 None:intergenic 35.0%
GGTTGAAAATTCAATAGTCG+AGG + chr7.3:50659-50678 None:intergenic 35.0%
GGTTTGAATCTGATTCCAAA+AGG + chr7.3:48299-48318 None:intergenic 35.0%
GTAAAGGAGAAATAATCTGC+AGG + chr7.3:51353-51372 None:intergenic 35.0%
GTTCACCTACAATTGATCAT+TGG + chr7.3:48925-48944 None:intergenic 35.0%
TAATAAGAGAGAAACAGACC+TGG + chr7.3:51254-51273 None:intergenic 35.0%
TAGCGAGATACTCAAATACT+TGG - chr7.3:47994-48013 MS.gene050727:CDS 35.0%
TAGTATGCACATACTTCCAT+AGG + chr7.3:50053-50072 None:intergenic 35.0%
TATAGAAGAAGGAATGGCAA+TGG - chr7.3:49405-49424 MS.gene050727:intron 35.0%
TGAACTCTGAATTTGTGAGA+GGG - chr7.3:51317-51336 MS.gene050727:intron 35.0%
TGTGTGTAAAGCAGTTGAAT+TGG + chr7.3:48241-48260 None:intergenic 35.0%
TTCTCTTCAACATATTGACC+GGG + chr7.3:52013-52032 None:intergenic 35.0%
TTGCATATTGCTGCAAAGAA+GGG - chr7.3:48558-48577 MS.gene050727:intron 35.0%
TTGTCATTAACAAGCTCATG+TGG - chr7.3:52194-52213 MS.gene050727:CDS 35.0%
TTTCATTTCTCTCACTTACG+TGG - chr7.3:52243-52262 MS.gene050727:CDS 35.0%
! ACCAAAAGTGCACACAATTT+AGG - chr7.3:49915-49934 MS.gene050727:intron 35.0%
! ATGAATGGCTTTTCAATTGC+TGG - chr7.3:48945-48964 MS.gene050727:intron 35.0%
! CCAAAAGTGCACACAATTTA+GGG - chr7.3:49916-49935 MS.gene050727:intron 35.0%
! CCTCTAGATTTAAAACTGCT+CGG + chr7.3:48518-48537 None:intergenic 35.0%
! CTTCTCGTTCATTTTCTACT+AGG + chr7.3:48883-48902 None:intergenic 35.0%
! GAAAAACAGAAGAGTTTTCG+TGG - chr7.3:47707-47726 MS.gene050727:CDS 35.0%
! GGATTTAGGACTGATAAGAA+AGG - chr7.3:48423-48442 MS.gene050727:CDS 35.0%
! TCGTATTCATGCACATTTTG+TGG + chr7.3:50147-50166 None:intergenic 35.0%
! TTATCTCTGGTTTGAGTAGT+AGG - chr7.3:50891-50910 MS.gene050727:intron 35.0%
! TTTAGTTGCTTTGCTGCATT+TGG + chr7.3:51797-51816 None:intergenic 35.0%
! TTTTGAACGGTGAATACAAG+AGG - chr7.3:52440-52459 MS.gene050727:CDS 35.0%
!! ATTGTTCTATTGATTCCGGA+TGG + chr7.3:49093-49112 None:intergenic 35.0%
!! CTTATTAGCTTTGTACAGTC+TGG - chr7.3:51267-51286 MS.gene050727:intron 35.0%
!! GATTAAGAAGTGCTTGTACA+GGG - chr7.3:49351-49370 MS.gene050727:intron 35.0%
!! TGTGAAAGCCTTATTAAGCA+AGG - chr7.3:48389-48408 MS.gene050727:CDS 35.0%
!!! GCTTCTATTTTAGGATTACG+TGG + chr7.3:48772-48791 None:intergenic 35.0%
!!! TTGTACAGTCTGGTTTGTTT+TGG - chr7.3:51277-51296 MS.gene050727:intron 35.0%
AAAACCCATTGATCATTGGG+TGG + chr7.3:48989-49008 None:intergenic 40.0%
AAAATATAGTCCCTGCTCCA+AGG - chr7.3:49848-49867 MS.gene050727:intron 40.0%
AAGAAGGAATGGCAATGGTT+GGG - chr7.3:49410-49429 MS.gene050727:intron 40.0%
AAGGAGAAATAATCTGCAGG+AGG + chr7.3:51350-51369 None:intergenic 40.0%
ACAAGCTCAAATAACTCCCA+TGG + chr7.3:49204-49223 None:intergenic 40.0%
ACATAACAACTAAGCACACC+CGG + chr7.3:49242-49261 None:intergenic 40.0%
ACCACCCAATGATCAATTGT+AGG - chr7.3:48917-48936 MS.gene050727:intron 40.0%
ACCTACAATTGATCATTGGG+TGG + chr7.3:48921-48940 None:intergenic 40.0%
ACGTGAAAGTCACACATTAC+CGG - chr7.3:50781-50800 MS.gene050727:intron 40.0%
ACTAAAATCTGAAGACAGGC+CGG + chr7.3:50803-50822 None:intergenic 40.0%
AGAAATTAGCATTTGGGCTC+GGG + chr7.3:49529-49548 None:intergenic 40.0%
ATCATGCTAATCGAGATACC+AGG + chr7.3:49973-49992 None:intergenic 40.0%
ATGAGCGAAGAAGACAGATA+AGG + chr7.3:49612-49631 None:intergenic 40.0%
ATTCACCGTTCAAAATCTCC+TGG + chr7.3:52435-52454 None:intergenic 40.0%
ATTCATTTCTTTGGCTGTCG+TGG - chr7.3:52117-52136 MS.gene050727:CDS 40.0%
CAAACCTTGCAAAAATAGCC+AGG - chr7.3:48313-48332 MS.gene050727:CDS 40.0%
CAGAATGACACAATAGCACA+TGG + chr7.3:52347-52366 None:intergenic 40.0%
CAGATCTTGTCTCCATAATG+AGG - chr7.3:51732-51751 MS.gene050727:CDS 40.0%
CCATAATTTCCTTTGCCATC+CGG - chr7.3:49075-49094 MS.gene050727:intron 40.0%
CGCAACTAAAATCTGAAGAC+AGG + chr7.3:50807-50826 None:intergenic 40.0%
CGGATGGCAAAGGAAATTAT+GGG + chr7.3:49077-49096 None:intergenic 40.0%
CTCATTATGGAGACAAGATC+TGG + chr7.3:51734-51753 None:intergenic 40.0%
CTGAACTCTGAATTTGTGAG+AGG - chr7.3:51316-51335 MS.gene050727:intron 40.0%
CTGAAGAAACTCCACATAAG+TGG - chr7.3:51908-51927 MS.gene050727:CDS 40.0%
GAAGGGATCATAACCATTTC+TGG + chr7.3:48044-48063 None:intergenic 40.0%
GACAAGGACAAACTCAATAC+AGG - chr7.3:50174-50193 MS.gene050727:intron 40.0%
GAGAAATTAGCATTTGGGCT+CGG + chr7.3:49530-49549 None:intergenic 40.0%
GCAAAAATAGCCAGGAACAA+TGG - chr7.3:48321-48340 MS.gene050727:CDS 40.0%
GCTTGGATCCTTGCTTAATA+AGG + chr7.3:48400-48419 None:intergenic 40.0%
GGATAGATGCGACAAAATTG+AGG - chr7.3:52371-52390 MS.gene050727:CDS 40.0%
GGGTTGAATTATCTGTCCTT+GGG - chr7.3:49774-49793 MS.gene050727:intron 40.0%
GGTTGAATTATCTGTCCTTG+GGG - chr7.3:49775-49794 MS.gene050727:intron 40.0%
GTCAGAGTTATAGTGAGACA+TGG + chr7.3:48139-48158 None:intergenic 40.0%
TATGCGACATGGAGAAAGAA+CGG + chr7.3:52405-52424 None:intergenic 40.0%
TCTAATGGGGTTCCTATCAT+AGG + chr7.3:49308-49327 None:intergenic 40.0%
TCTCAGCTGTATCTTCTTTC+TGG - chr7.3:50581-50600 MS.gene050727:intron 40.0%
TCTCTTCAACATATTGACCG+GGG + chr7.3:52012-52031 None:intergenic 40.0%
TGAATACGAACACAGAGACA+AGG - chr7.3:50158-50177 MS.gene050727:intron 40.0%
TGAGCGAAGAAGACAGATAA+GGG + chr7.3:49611-49630 None:intergenic 40.0%
! AGATTTAAAACTGCTCGGTC+AGG + chr7.3:48513-48532 None:intergenic 40.0%
! CCCTAAATTGTGTGCACTTT+TGG + chr7.3:49919-49938 None:intergenic 40.0%
! GAAAAGTTTTCGCGTTGTCA+TGG - chr7.3:47745-47764 MS.gene050727:CDS 40.0%
! GAAGAGTTTTCGTGGATTCA+TGG - chr7.3:47715-47734 MS.gene050727:CDS 40.0%
! GCTATTGTGTCATTCTGCAT+AGG - chr7.3:52350-52369 MS.gene050727:CDS 40.0%
! TCAGACCAGGAGATTTTGAA+CGG - chr7.3:52427-52446 MS.gene050727:CDS 40.0%
! TCAGCTTCTTAGCGATTTTC+TGG + chr7.3:51892-51911 None:intergenic 40.0%
! TGGGTTGAATTATCTGTCCT+TGG - chr7.3:49773-49792 MS.gene050727:intron 40.0%
! TTCAGTATGGGTTGTTCTTC+AGG + chr7.3:51499-51518 None:intergenic 40.0%
! TTCTGAGAACGGACATGATT+TGG - chr7.3:47967-47986 MS.gene050727:CDS 40.0%
!! ATTATGGCTTGTTTGCACAC+TGG - chr7.3:48807-48826 MS.gene050727:intron 40.0%
!! GGATTAAGAAGTGCTTGTAC+AGG - chr7.3:49350-49369 MS.gene050727:intron 40.0%
!! GTGGATTGGAAAAACCATCA+TGG - chr7.3:49166-49185 MS.gene050727:intron 40.0%
!! TACCGATTCATTTAGCTGCT+CGG - chr7.3:47837-47856 MS.gene050727:CDS 40.0%
!! TGTTGGCTGCATTCTTTTGA+TGG - chr7.3:51396-51415 MS.gene050727:intron 40.0%
!!! AGATTTTAGTTGCGCCTCTT+TGG - chr7.3:50813-50832 MS.gene050727:intron 40.0%
!!! CCGAGCAGTTTTAAATCTAG+AGG - chr7.3:48515-48534 MS.gene050727:CDS 40.0%
!!! TGTTCCTGGCTATTTTTGCA+AGG + chr7.3:48320-48339 None:intergenic 40.0%
AAAGTCAGATCCTCTTCTGC+AGG - chr7.3:49027-49046 MS.gene050727:intron 45.0%
AACAGCAACAACAGTAGCAG+AGG + chr7.3:51951-51970 None:intergenic 45.0%
AAGAAGAGCAAGGAATCACC+TGG - chr7.3:47800-47819 MS.gene050727:CDS 45.0%
AAGTGAGAGGAAGAAGAGCA+AGG - chr7.3:47790-47809 MS.gene050727:CDS 45.0%
ACAAAGTCCAGACTTGATGG+AGG + chr7.3:50536-50555 None:intergenic 45.0%
ACATCGTGTTACAGCCAAGT+AGG + chr7.3:50710-50729 None:intergenic 45.0%
ACCATCTACTTGGAGTGGAT+TGG - chr7.3:49152-49171 MS.gene050727:intron 45.0%
AGAAGAGCAAGGAATCACCT+GGG - chr7.3:47801-47820 MS.gene050727:CDS 45.0%
AGAAGGAATGGCAATGGTTG+GGG - chr7.3:49411-49430 MS.gene050727:intron 45.0%
AGATCCTCTTCTGCAGGTTT+AGG - chr7.3:49033-49052 MS.gene050727:intron 45.0%
AGGTCAAACTGCACTACACA+TGG - chr7.3:48443-48462 MS.gene050727:CDS 45.0%
AGTAGGAAGAGGTGAACCTA+AGG + chr7.3:50693-50712 None:intergenic 45.0%
ATCTGTAGTCATGGCCAAGT+TGG + chr7.3:48214-48233 None:intergenic 45.0%
ATGCACAACTGTATGTCCAC+CGG - chr7.3:49693-49712 MS.gene050727:intron 45.0%
ATTTGGAGGTTTCCCTTGGT+CGG + chr7.3:51780-51799 None:intergenic 45.0%
CAACCAAAAAGACCACCCTT+AGG - chr7.3:50674-50693 MS.gene050727:intron 45.0%
CAAGACAAGGGGTTCAGTAT+GGG + chr7.3:51511-51530 None:intergenic 45.0%
CACTACACATGGCTGTGAAA+GGG - chr7.3:48454-48473 MS.gene050727:CDS 45.0%
CAGAAGAGGATCTGACTTTC+AGG + chr7.3:49026-49045 None:intergenic 45.0%
CAGACAAAGTCCAGACTTGA+TGG + chr7.3:50539-50558 None:intergenic 45.0%
CAGAGGTAATCGCATTGTTC+AGG + chr7.3:51934-51953 None:intergenic 45.0%
CAGCTGAGATTTACCATGAC+AGG + chr7.3:50570-50589 None:intergenic 45.0%
CATGGAGAAAGAACGGCTTT+CGG + chr7.3:52398-52417 None:intergenic 45.0%
CATTAACAAGCTCATGTGGC+TGG - chr7.3:52198-52217 MS.gene050727:CDS 45.0%
CATTGTTCAGGCCACTTATG+TGG + chr7.3:51922-51941 None:intergenic 45.0%
CCGGATGGCAAAGGAAATTA+TGG + chr7.3:49078-49097 None:intergenic 45.0%
CTGAGATTTACCATGACAGG+AGG + chr7.3:50567-50586 None:intergenic 45.0%
CTGTTAATTCCACCGACCAA+GGG - chr7.3:51765-51784 MS.gene050727:CDS 45.0%
CTTATGTTTCGTGCACAGCT+CGG + chr7.3:49743-49762 None:intergenic 45.0%
GAAATTAGCATTTGGGCTCG+GGG + chr7.3:49528-49547 None:intergenic 45.0%
GAAGAAGGAATGGCAATGGT+TGG - chr7.3:49409-49428 MS.gene050727:intron 45.0%
GACAGTCTTACCATTGTTCC+TGG + chr7.3:48334-48353 None:intergenic 45.0%
GAGCGAAGAAGACAGATAAG+GGG + chr7.3:49610-49629 None:intergenic 45.0%
GCTTCTATTGTCGCCAGAAA+TGG - chr7.3:48028-48047 MS.gene050727:CDS 45.0%
GGCACATCACCATTTATCTC+TGG - chr7.3:50878-50897 MS.gene050727:intron 45.0%
GGGTAAGTGGTAACCGTAAA+AGG + chr7.3:49558-49577 None:intergenic 45.0%
GGTCATCATGCTTCAAGCTA+TGG + chr7.3:49722-49741 None:intergenic 45.0%
GTAGGAAGAGGTGAACCTAA+GGG + chr7.3:50692-50711 None:intergenic 45.0%
TAAGACTGTCCTTCACTCTG+CGG - chr7.3:48344-48363 MS.gene050727:CDS 45.0%
TAGGTTCACCTCTTCCTACT+TGG - chr7.3:50693-50712 MS.gene050727:intron 45.0%
TAGTGGGATCACACTCAAGA+TGG - chr7.3:52266-52285 MS.gene050727:CDS 45.0%
TATATAGGGGGAAGGGTAAG+TGG + chr7.3:49571-49590 None:intergenic 45.0%
TCAAAACCATGAGGCAGCAA+AGG - chr7.3:47895-47914 MS.gene050727:CDS 45.0%
TCCAATCCACTCCAAGTAGA+TGG + chr7.3:49156-49175 None:intergenic 45.0%
TCTCAGAAGCGACGTAAAGA+GGG + chr7.3:47955-47974 None:intergenic 45.0%
TCTCCATAATGAGGGATGCT+GGG - chr7.3:51741-51760 MS.gene050727:CDS 45.0%
TCTCTCACTTACGTGGTAGT+GGG - chr7.3:52250-52269 MS.gene050727:CDS 45.0%
TCTGTAGTCATGGCCAAGTT+GGG + chr7.3:48213-48232 None:intergenic 45.0%
TGCTTTGCAGCAACATGGAA+GGG + chr7.3:48061-48080 None:intergenic 45.0%
TGTTACAGCCAAGTAGGAAG+AGG + chr7.3:50704-50723 None:intergenic 45.0%
TGTTCTTCAGGCTGATTGGT+GGG + chr7.3:51487-51506 None:intergenic 45.0%
TTAAGCAAGGATCCAAGCAC+CGG - chr7.3:48402-48421 MS.gene050727:CDS 45.0%
TTACACACAGCTGCTACACA+AGG - chr7.3:48252-48271 MS.gene050727:CDS 45.0%
TTAGTCGTGGACCATCTACT+TGG - chr7.3:49142-49161 MS.gene050727:intron 45.0%
TTCCATGTTGCTGCAAAGCA+GGG - chr7.3:48061-48080 MS.gene050727:CDS 45.0%
TTCTCAGAAGCGACGTAAAG+AGG + chr7.3:47956-47975 None:intergenic 45.0%
TTCTCTCACTTACGTGGTAG+TGG - chr7.3:52249-52268 MS.gene050727:CDS 45.0%
TTGTTCTTCAGGCTGATTGG+TGG + chr7.3:51488-51507 None:intergenic 45.0%
! ACCGATTCATTTAGCTGCTC+GGG - chr7.3:47838-47857 MS.gene050727:CDS 45.0%
! AGTGCACACAATTTAGGGTG+AGG - chr7.3:49921-49940 MS.gene050727:intron 45.0%
! AGTTGCTTTGCTGCATTTGG+AGG + chr7.3:51794-51813 None:intergenic 45.0%
! CTTTACGTCGCTTCTGAGAA+CGG - chr7.3:47956-47975 MS.gene050727:CDS 45.0%
! GAACCTAAGGGTGGTCTTTT+TGG + chr7.3:50680-50699 None:intergenic 45.0%
! TGACGTCGTGAATCTCCTTT+TGG - chr7.3:48281-48300 MS.gene050727:CDS 45.0%
! TTTAGGGTGAGGACGACAAT+CGG - chr7.3:49932-49951 MS.gene050727:intron 45.0%
!! AGGATCTGACTTTCAGGTTC+AGG + chr7.3:49020-49039 None:intergenic 45.0%
!! CTATTGATTCCGGATGGCAA+AGG + chr7.3:49087-49106 None:intergenic 45.0%
!! TACCCTCCGTTGATAACAAG+CGG + chr7.3:51646-51665 None:intergenic 45.0%
AAGGAATCACCTGGGAAACG+TGG - chr7.3:47809-47828 MS.gene050727:CDS 50.0%
ACAAGTCCTTTGCTGCCTCA+TGG + chr7.3:47904-47923 None:intergenic 50.0%
ACTTCAGCCTCCATCAAGTC+TGG - chr7.3:50526-50545 MS.gene050727:intron 50.0%
AGCCTGTCTTCAGATAGCCT+TGG + chr7.3:49868-49887 None:intergenic 50.0%
ATGCTTCAAGCTATGGACCC+CGG + chr7.3:49715-49734 None:intergenic 50.0%
ATTCATTTAGCTGCTCGGGC+TGG - chr7.3:47842-47861 MS.gene050727:CDS 50.0%
CAATAGTCGAGGATGGTGAC+TGG + chr7.3:50648-50667 None:intergenic 50.0%
CATGCCTAAACCTGCAGAAG+AGG + chr7.3:49040-49059 None:intergenic 50.0%
CATGTCGCATACATCAGACC+AGG - chr7.3:52414-52433 MS.gene050727:CDS 50.0%
CATTTCTTTGGCTGTCGTGG+TGG - chr7.3:52120-52139 MS.gene050727:CDS 50.0%
CGCTGCCAATAGTACCAACA+CGG + chr7.3:49285-49304 None:intergenic 50.0%
CTATTGGCAGCGCCTATGAT+AGG - chr7.3:49293-49312 MS.gene050727:intron 50.0%
CTCAGAAGCGACGTAAAGAG+GGG + chr7.3:47954-47973 None:intergenic 50.0%
CTCCAAGGCTATCTGAAGAC+AGG - chr7.3:49863-49882 MS.gene050727:intron 50.0%
CTCCATAATGAGGGATGCTG+GGG - chr7.3:51742-51761 MS.gene050727:CDS 50.0%
CTGCATTTGGAGGTTTCCCT+TGG + chr7.3:51784-51803 None:intergenic 50.0%
CTGCTTTGCAGCAACATGGA+AGG + chr7.3:48062-48081 None:intergenic 50.0%
CTGGTCTGATGTATGCGACA+TGG + chr7.3:52416-52435 None:intergenic 50.0%
CTTCACTCTGCGGCTAGAAT+GGG - chr7.3:48354-48373 MS.gene050727:CDS 50.0%
CTTCCATGTTGCTGCAAAGC+AGG - chr7.3:48060-48079 MS.gene050727:CDS 50.0%
GAAGGAATGGCAATGGTTGG+GGG - chr7.3:49412-49431 MS.gene050727:intron 50.0%
GAATAACAAAGAGGGAGGGG+AGG + chr7.3:49650-49669 None:intergenic 50.0%
GCAAGACAAGGGGTTCAGTA+TGG + chr7.3:51512-51531 None:intergenic 50.0%
GCACTACACATGGCTGTGAA+AGG - chr7.3:48453-48472 MS.gene050727:CDS 50.0%
GCCCGAGCAGCTAAATGAAT+CGG + chr7.3:47842-47861 None:intergenic 50.0%
GCTGTTAATTCCACCGACCA+AGG - chr7.3:51764-51783 MS.gene050727:CDS 50.0%
GGGGTAAGCACCTTACAAGA+TGG - chr7.3:49431-49450 MS.gene050727:intron 50.0%
GGGTTGTTCTTCAGGCTGAT+TGG + chr7.3:51491-51510 None:intergenic 50.0%
GTCTCCATAATGAGGGATGC+TGG - chr7.3:51740-51759 MS.gene050727:CDS 50.0%
GTCTGAATCTCCTCCTGTCA+TGG - chr7.3:50554-50573 MS.gene050727:intron 50.0%
GTTCTTCAGGCTGATTGGTG+GGG + chr7.3:51486-51505 None:intergenic 50.0%
TAACAACTAAGCACACCCGG+CGG + chr7.3:49239-49258 None:intergenic 50.0%
TAATGTCTTCGGCTCCGTGT+TGG - chr7.3:49268-49287 MS.gene050727:intron 50.0%
TCAGTCCTAAATCCGGTGCT+TGG + chr7.3:48417-48436 None:intergenic 50.0%
TGAGCTTCATGGGAAGTGAG+AGG - chr7.3:47777-47796 MS.gene050727:CDS 50.0%
TGAGGCAGCAAAGGACTTGT+TGG - chr7.3:47904-47923 MS.gene050727:CDS 50.0%
TGCAAAGAAGGGCCGTAATC+AGG - chr7.3:48569-48588 MS.gene050727:intron 50.0%
TGCACAACTGTATGTCCACC+GGG - chr7.3:49694-49713 MS.gene050727:intron 50.0%
TTAGGGTGAGGACGACAATC+GGG - chr7.3:49933-49952 MS.gene050727:intron 50.0%
TTCACTCTGCGGCTAGAATG+GGG - chr7.3:48355-48374 MS.gene050727:CDS 50.0%
TTCATTTAGCTGCTCGGGCT+GGG - chr7.3:47843-47862 MS.gene050727:CDS 50.0%
TTGGCAAAGCAGAACCTCGA+GGG - chr7.3:47923-47942 MS.gene050727:CDS 50.0%
! CTTCAGATAGCCTTGGAGCA+GGG + chr7.3:49861-49880 None:intergenic 50.0%
! GCTGCACTCTTTTCCCAACT+TGG - chr7.3:48197-48216 MS.gene050727:CDS 50.0%
! GTCGGCTCTCTCTCAGAATA+GGG + chr7.3:49485-49504 None:intergenic 50.0%
! GTTTTCGCGTTGTCATGGAG+AGG - chr7.3:47750-47769 MS.gene050727:CDS 50.0%
! TCTTCAGATAGCCTTGGAGC+AGG + chr7.3:49862-49881 None:intergenic 50.0%
!! AGGATCCAAGCACCGGATTT+AGG - chr7.3:48409-48428 MS.gene050727:CDS 50.0%
!! TGTCCGCCGCTTGTTATCAA+CGG - chr7.3:51637-51656 MS.gene050727:CDS 50.0%
!!! CGGGTCGCTTTTTGTTATCC+TGG - chr7.3:49952-49971 MS.gene050727:intron 50.0%
ACTCCAACAGACACGCCAGA+CGG - chr7.3:51856-51875 MS.gene050727:CDS 55.0%
AGCATTTGGGCTCGGGGTAT+TGG + chr7.3:49522-49541 None:intergenic 55.0%
AGCCCCAGCATCCCTCATTA+TGG + chr7.3:51747-51766 None:intergenic 55.0%
CCATTCTAGCCGCAGAGTGA+AGG + chr7.3:48356-48375 None:intergenic 55.0%
CCTTCACTCTGCGGCTAGAA+TGG - chr7.3:48353-48372 MS.gene050727:CDS 55.0%
CGTGGACCATCTACTTGGAG+TGG - chr7.3:49147-49166 MS.gene050727:intron 55.0%
CTGGCGTGTCTGTTGGAGTT+GGG + chr7.3:51855-51874 None:intergenic 55.0%
GACCCTGCTTTGCAGCAACA+TGG + chr7.3:48066-48085 None:intergenic 55.0%
GCACAACTGTATGTCCACCG+GGG - chr7.3:49695-49714 MS.gene050727:intron 55.0%
GCTCACGAGCAGTTCCAAAG+AGG + chr7.3:50830-50849 None:intergenic 55.0%
GCTGCAAAGCAGGGTCATCT+TGG - chr7.3:48070-48089 MS.gene050727:CDS 55.0%
GGAAGAGGTGAACCTAAGGG+TGG + chr7.3:50689-50708 None:intergenic 55.0%
GTTGGCAAAGCAGAACCTCG+AGG - chr7.3:47922-47941 MS.gene050727:CDS 55.0%
TCTGGCGTGTCTGTTGGAGT+TGG + chr7.3:51856-51875 None:intergenic 55.0%
TGGCAAAGCAGAACCTCGAG+GGG - chr7.3:47924-47943 MS.gene050727:CDS 55.0%
TTCGCGTTGTCATGGAGAGG+CGG - chr7.3:47753-47772 MS.gene050727:CDS 55.0%
TTGACCGGGGACAGTGAAGA+TGG + chr7.3:51999-52018 None:intergenic 55.0%
! CGGCTCCGTGTTGGTACTAT+TGG - chr7.3:49277-49296 MS.gene050727:intron 55.0%
! GGTCGGCTCTCTCTCAGAAT+AGG + chr7.3:49486-49505 None:intergenic 55.0%
! TGCGGCTAGAATGGGGCATT+TGG - chr7.3:48362-48381 MS.gene050727:CDS 55.0%
! TTGTTTGTTGCCTGTGCCGC+CGG - chr7.3:49220-49239 MS.gene050727:intron 55.0%
!! CCTCCGTTGATAACAAGCGG+CGG + chr7.3:51643-51662 None:intergenic 55.0%
!! CGCCGCTTGTTATCAACGGA+GGG - chr7.3:51641-51660 MS.gene050727:CDS 55.0%
!! GGTATTGGCTCTGAGAAGCG+AGG + chr7.3:49507-49526 None:intergenic 55.0%
!! TTGGCTCTGAGAAGCGAGGT+CGG + chr7.3:49503-49522 None:intergenic 55.0%
ACAAAGAGGGAGGGGAGGAG+AGG + chr7.3:49645-49664 None:intergenic 60.0%
AGGGGAGGAGAGGAACGTGT+GGG + chr7.3:49635-49654 None:intergenic 60.0%
CTCCAACAGACACGCCAGAC+GGG - chr7.3:51857-51876 MS.gene050727:CDS 60.0%
CTTCAAGCTATGGACCCCGG+TGG + chr7.3:49712-49731 None:intergenic 60.0%
GAGAGGCGGCTGAGCTTCAT+GGG - chr7.3:47767-47786 MS.gene050727:CDS 60.0%
GCAGCCATCTTCACTGTCCC+CGG - chr7.3:51992-52011 MS.gene050727:intron 60.0%
GGCAAAGCAGAACCTCGAGG+GGG - chr7.3:47925-47944 MS.gene050727:CDS 60.0%
GGTAAGTCGCCACGTTTCCC+AGG + chr7.3:47821-47840 None:intergenic 60.0%
TGGAGGTTTCCCTTGGTCGG+TGG + chr7.3:51777-51796 None:intergenic 60.0%
! TGTTTGTTGCCTGTGCCGCC+GGG - chr7.3:49221-49240 MS.gene050727:intron 60.0%
!! CCGCCGCTTGTTATCAACGG+AGG - chr7.3:51640-51659 MS.gene050727:CDS 60.0%
AAAGAGGGGTCTCCCCCTCG+AGG + chr7.3:47940-47959 None:intergenic 65.0%
AGACACGCCAGACGGGCATG+AGG - chr7.3:51864-51883 MS.gene050727:CDS 65.0%
GACACGCCAGACGGGCATGA+GGG - chr7.3:51865-51884 MS.gene050727:CDS 65.0%
GAGGGGAGGAGAGGAACGTG+TGG + chr7.3:49636-49655 None:intergenic 65.0%
GGAGAGGCGGCTGAGCTTCA+TGG - chr7.3:47766-47785 MS.gene050727:CDS 65.0%
TCTGGACCCTCATGCCCGTC+TGG + chr7.3:51874-51893 None:intergenic 65.0%
TGCCCGTCTGGCGTGTCTGT+TGG + chr7.3:51862-51881 None:intergenic 65.0%
CTAAGCACACCCGGCGGCAC+AGG + chr7.3:49233-49252 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 47704 52477 47704 ID=MS.gene050727
chr7.3 mRNA 47704 52477 47704 ID=MS.gene050727.t1;Parent=MS.gene050727
chr7.3 exon 52090 52477 52090 ID=MS.gene050727.t1.exon1;Parent=MS.gene050727.t1
chr7.3 CDS 52090 52477 52090 ID=cds.MS.gene050727.t1;Parent=MS.gene050727.t1
chr7.3 exon 51591 52000 51591 ID=MS.gene050727.t1.exon2;Parent=MS.gene050727.t1
chr7.3 CDS 51591 52000 51591 ID=cds.MS.gene050727.t1;Parent=MS.gene050727.t1
chr7.3 exon 47704 48546 47704 ID=MS.gene050727.t1.exon3;Parent=MS.gene050727.t1
chr7.3 CDS 47704 48546 47704 ID=cds.MS.gene050727.t1;Parent=MS.gene050727.t1
Gene Sequence

>MS.gene050727

ATGGAAAAACAGAAGAGTTTTCGTGGATTCATGGAGAAACAGAAAAGTTTTCGCGTTGTCATGGAGAGGCGGCTGAGCTTCATGGGAAGTGAGAGGAAGAAGAGCAAGGAATCACCTGGGAAACGTGGCGACTTACCGATTCATTTAGCTGCTCGGGCTGGGAACTTGACTAGAGTCAAAGAGATACTACTTCAAAACCATGAGGCAGCAAAGGACTTGTTGGCAAAGCAGAACCTCGAGGGGGAGACCCCTCTTTACGTCGCTTCTGAGAACGGACATGATTTGGTTGTTAGCGAGATACTCAAATACTTGGACTTGCAAACTGCTTCTATTGTCGCCAGAAATGGTTATGATCCCTTCCATGTTGCTGCAAAGCAGGGTCATCTTGGTAAGTAAGTTTCAGATCATGTTTGTGTTCTTTTCACAAATGTACCATGTCTCACTATAACTCTGACCGAGAAAAAAAGAATCTTGCAGAGGTGCTGAGAGAACTGCTGCACTCTTTTCCCAACTTGGCCATGACTACAGATTTGTCCAATTCAACTGCTTTACACACAGCTGCTACACAAGGTCACATTGACGTCGTGAATCTCCTTTTGGAATCAGATTCAAACCTTGCAAAAATAGCCAGGAACAATGGTAAGACTGTCCTTCACTCTGCGGCTAGAATGGGGCATTTGGAAGTTGTGAAAGCCTTATTAAGCAAGGATCCAAGCACCGGATTTAGGACTGATAAGAAAGGTCAAACTGCACTACACATGGCTGTGAAAGGGCAAAATGAAGAAATTTTGCTGGAATTGGTGAAACCTGACCGAGCAGTTTTAAATCTAGAGGATAATAAAGGAAATACAGCATTGCATATTGCTGCAAAGAAGGGCCGTAATCAGGTGTTTGCTTTTACTTTTATAATTATTATTCATTGTATATAAAACTTATTTTCTTATCAGCCTTTATAAACTAATTATTGAGATATTCTTTATTTTTGTTTAGCGACGAACATGCATCCATGTCTAATACTTGTTCTTATGATTCAAAGTTGACAGAAAAAGATTCACACAAAAATAACCACGTAATCCTAAAATAGAAGCATAACTGTAAGTCATATTATGGCTTGTTTGCACACTGGTAGTTTACAATGTAGAAAAGATGGTGGAGTGACAGATAAATAGACACATACCTAGTAGAAAATGAACGAGAAGCAGAGAATTAAATAACCACCCAATGATCAATTGTAGGTGAACATGAATGGCTTTTCAATTGCTGGTTTCACAAAATTAAATAACCACCCAATGATCAATGGGTTTTTTAGATTTCCTGAACCTGAAAGTCAGATCCTCTTCTGCAGGTTTAGGCATGTCCCATGTAAGAAACCCATAATTTCCTTTGCCATCCGGAATCAATAGAACAATTTGGGACCATCATGTGCAGTATTTTCTATTTAGTCGTGGACCATCTACTTGGAGTGGATTGGAAAAACCATCATGGTTATTGAAAAAACCATGGGAGTTATTTGAGCTTGTTTGTTGCCTGTGCCGCCGGGTGTGCTTAGTTGTTATGTCTATAATAATGTCTTCGGCTCCGTGTTGGTACTATTGGCAGCGCCTATGATAGGAACCCCATTAGATAGAAATCAGACTGATATTAAAGGATTAAGAAGTGCTTGTACAGGGATTTCACTTTAACAAGCGGAAGAAACAACTATATAGAAGAAGGAATGGCAATGGTTGGGGGTAAGCACCTTACAAGATGGATAGAGTAAAATACTGAAGCAAGACATTCCCTATTCTGAGAGAGAGCCGACCTCGCTTCTCAGAGCCAATACCCCGAGCCCAAATGCTAATTTCTCACATGCCTTTTACGGTTACCACTTACCCTTCCCCCTATATATTTCTCTTATGTTATTCCCCTTATCTGTCTTCTTCGCTCATCCCACACGTTCCTCTCCTCCCCTCCCTCTTTGTTATTCATTTTGTTCTCAAGTTAAAAGAAATGCACAACTGTATGTCCACCGGGGTCCATAGCTTGAAGCATGATGACCGAGCTGTGCACGAAACATAAGAATTTTAACTTGGGTTGAATTATCTGTCCTTGGGGTTATTTTCAACTAAAAAATATATTGTTTTCTTCTCCATTATTGCTATATGAAAATATAGTCCCTGCTCCAAGGCTATCTGAAGACAGGCTGATTGTTATTTAATTTTGCAAAGAGATACCAAAAGTGCACACAATTTAGGGTGAGGACGACAATCGGGTCGCTTTTTGTTATCCTGGTATCTCGATTAGCATGATGTTACTTGTGATGCTTCAGTTGTGCTCAATTTTAGCTACGTCAGTAAAAACTACTTGCCTATGGAAGTATGTGCATACTAAGAGTAGAAGAGCATCTCACTGAAAATTGTGCTGTTTGAAAATAGAACTTAGTTTGATCTATGAAGTAGTGCCACAAAATGTGCATGAATACGAACACAGAGACAAGGACAAACTCAATACAGGACATTGAAACACACACACAGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCGTAGGAAATTGAATAATTACATTATAATTCGTTTTATCTTAGGAAATTGTGTCTGCTTAGTTACTCATCGTATAAATTGCATTCATATTTATTATGGTGTGTGTGATTTTACTGAGTATATTTATTCACAAAAACGTACTTTAAAGCTACTCTTCTCATTTCATTTTTTCACTTTTAAGTTGGTATTAGAGCAGAGTTTGATCATTCACTTCTATTGTGTACTTCAGCCTCCATCAAGTCTGGACTTTGTCTGAATCTCCTCCTGTCATGGTAAATCTCAGCTGTATCTTCTTTCTGGCCATTGTTAATATACTTTTTTGGTAATCGTCAGTCAGTTTTCCAGTCACCATCCTCGACTATTGAATTTTCAACCAAAAAGACCACCCTTAGGTTCACCTCTTCCTACTTGGCTGTAACACGATGTTTGATCAGTTGAAAGCGTGTCTCACCACAATAGTTTTCTACTTCGTTAGCTACGTGAAAGTCACACATTACCGGCCTGTCTTCAGATTTTAGTTGCGCCTCTTTGGAACTGCTCGTGAGCCTCTCCTAAGTCTTTTTTTTTTTTTTTTGGCACATCACCATTTATCTCTGGTTTGAGTAGTAGGTATAAGTTCCTTGGATGCCATCACTTTTTTTGTTCATGTAGCTTGCTGTTTCAGTCTATTTTCTTTCTTATGGCATTAATTGGTTAAGAGTAATAAAAGCTCCGATCTTATTTGGTTTCTCTAGAGAGCCATCAATTCCTATGAAAAACATTAATGAATCCTTAATCGGTATTCTTTTGAAGTTTGATTTCTTGGTTAAGGACCATATGAATTATGATAATTTGATAACCTAAGTTGAAAATAGTGATGCTTCATGTGAACGTGAAAAAGTTGATTATTAGTTAGTATCCTTACTTTGGCAATGTATTTCCACATCATTTTTTGTTCTTTTAATTAACCAGGTCTGTTTCTCTCTTATTAGCTTTGTACAGTCTGGTTTGTTTTGGTTCTGCAGTACCAAATCTGAACTCTGAATTTGTGAGAGGGATACTCACCTCCTGCAGATTATTTCTCCTTTACTTACTTATTAATTCATTATTTATTGTTGGCTGCATTCTTTTGATGGCACACATTTAAATGATAGTTGACTGTTAACATGAAAAATACTGTAGCTTCAGTAAATTAAGAATCCCCACCAATCAGCCTGAAGAACAACCCATACTGAACCCCTTGTCTTGCATTGTGATTTTTATTTTTTTTAGAAAGATAAAGTTGATACCAAGATAGTGGAGAGTAATTTTGCTTTCAATATTTATTCTGAAGTGGTCATTATTAACTACAGAATGTCCGCCGCTTGTTATCAACGGAGGGTATTAACATCAATGCTACTAATAAGGCGGGAGAGACTCCTCTTGACATTGCAGAAAAATTTGGTAGTCCAGATCTTGTCTCCATAATGAGGGATGCTGGGGCTGTTAATTCCACCGACCAAGGGAAACCTCCAAATGCAGCAAAGCAACTAAAGCAGACTGTCAGCGACATAAAGCATGATGTGCAATCCCAACTCCAACAGACACGCCAGACGGGCATGAGGGTCCAGAAAATCGCTAAGAAGCTGAAGAAACTCCACATAAGTGGCCTGAACAATGCGATTACCTCTGCTACTGTTGTTGCTGTTCTCATTGCTACAGTTGCTTTTGCAGCCATCTTCACTGTCCCCGGTCAATATGTTGAAGAGAAAGTAAATGGCTTTTCACTTGGACAAGCAACTATAGCGAACAATCCAGCTTTCCTGATATTTTTTGTGTTTGATAGCCTGGCATTATTCATTTCTTTGGCTGTCGTGGTGGTTCAAACTTCAGTTGTTGTGATTGAGCAAAAGGCAAAGAAGCAGCTTGTTTTTGTCATTAACAAGCTCATGTGGCTGGCTTGCCTTTTCATTTCCATTGCTTTCATTTCTCTCACTTACGTGGTAGTGGGATCACACTCAAGATGGCTTGCTATATATGCTACAGTGATTGGAAGCTTGATAATGCTCTCTACAATCGGTTCCATGTGCTATTGTGTCATTCTGCATAGGATAGATGCGACAAAATTGAGGGCCGAAAGCCGTTCTTTCTCCATGTCGCATACATCAGACCAGGAGATTTTGAACGGTGAATACAAGAGGATGTACGCACTTTAG
Protein sequence

>MS.gene050727.t1

MEKQKSFRGFMEKQKSFRVVMERRLSFMGSERKKSKESPGKRGDLPIHLAARAGNLTRVKEILLQNHEAAKDLLAKQNLEGETPLYVASENGHDLVVSEILKYLDLQTASIVARNGYDPFHVAAKQGHLEVLRELLHSFPNLAMTTDLSNSTALHTAATQGHIDVVNLLLESDSNLAKIARNNGKTVLHSAARMGHLEVVKALLSKDPSTGFRTDKKGQTALHMAVKGQNEEILLELVKPDRAVLNLEDNKGNTALHIAAKKGRNQNVRRLLSTEGININATNKAGETPLDIAEKFGSPDLVSIMRDAGAVNSTDQGKPPNAAKQLKQTVSDIKHDVQSQLQQTRQTGMRVQKIAKKLKKLHISGLNNAITSATVVAVLIATVAFAAIFTVPGQYVEEKVNGFSLGQATIANNPAFLIFFVFDSLALFISLAVVVVQTSVVVIEQKAKKQLVFVINKLMWLACLFISIAFISLTYVVVGSHSRWLAIYATVIGSLIMLSTIGSMCYCVILHRIDATKLRAESRSFSMSHTSDQEILNGEYKRMYAL