AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene025832


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025832.t1 MTR_7g117620 99.267 546 4 0 1 546 1 546 0.0 1115
MS.gene025832.t1 MTR_2g096190 56.848 533 208 6 32 546 16 544 0.0 568
MS.gene025832.t1 MTR_4g062100 56.038 530 220 7 30 546 17 546 0.0 547
MS.gene025832.t1 MTR_7g100390 54.598 522 222 7 36 546 3 520 0.0 523
MS.gene025832.t1 MTR_1g115575 45.604 546 254 7 31 546 61 593 4.04e-142 423
MS.gene025832.t1 MTR_1g032100 44.015 518 262 8 52 546 19 531 5.13e-136 405
MS.gene025832.t1 MTR_1g032100 32.778 180 116 3 48 227 96 270 3.44e-13 72.4
MS.gene025832.t1 MTR_8g105260 44.330 485 250 8 77 546 59 538 4.42e-129 387
MS.gene025832.t1 MTR_8g105260 32.222 180 117 3 48 227 103 277 4.78e-13 72.0
MS.gene025832.t1 MTR_7g100430 40.968 537 286 4 31 546 56 582 6.76e-117 358
MS.gene025832.t1 MTR_2g101320 27.237 503 288 10 44 478 71 563 2.49e-40 155
MS.gene025832.t1 MTR_2g101320 30.275 218 151 1 83 300 38 254 7.73e-15 77.8
MS.gene025832.t1 MTR_2g101310 25.779 578 341 16 41 544 68 631 3.58e-39 152
MS.gene025832.t1 MTR_2g101310 32.609 230 153 2 84 312 39 267 6.89e-17 84.3
MS.gene025832.t1 MTR_2g101310 32.432 259 164 4 41 295 68 319 3.06e-26 112
MS.gene025832.t1 MTR_2g101310 32.609 230 153 2 84 312 39 267 3.32e-16 82.0
MS.gene025832.t1 MTR_8g467780 24.719 356 211 7 119 438 46 380 6.48e-22 99.0
MS.gene025832.t1 MTR_8g039620 27.273 308 183 6 100 393 36 316 1.10e-21 98.2
MS.gene025832.t1 MTR_8g073260 27.875 287 173 6 119 393 46 310 2.26e-21 97.4
MS.gene025832.t1 MTR_1g059930 28.125 288 171 7 119 393 47 311 4.85e-21 96.3
MS.gene025832.t1 MTR_8g066670 23.941 472 288 14 66 501 1056 1492 7.47e-21 97.4
MS.gene025832.t1 MTR_7g451420 30.303 264 163 6 85 332 9 267 1.15e-20 93.6
MS.gene025832.t1 MTR_3g105650 23.670 376 230 10 119 475 40 377 2.29e-20 94.0
MS.gene025832.t1 MTR_3g085830 28.862 246 145 7 86 312 162 396 7.64e-20 93.6
MS.gene025832.t1 MTR_5g085810 25.577 477 255 17 55 486 264 685 4.01e-19 91.7
MS.gene025832.t1 MTR_5g085830 24.439 446 273 14 75 486 242 657 2.65e-18 89.0
MS.gene025832.t1 MTR_3g016210 26.159 302 170 7 119 393 45 320 2.69e-18 87.8
MS.gene025832.t1 MTR_8g080080 29.167 288 168 8 40 295 99 382 4.12e-18 88.2
MS.gene025832.t1 MTR_7g021090 28.959 221 141 3 119 327 44 260 8.56e-18 86.3
MS.gene025832.t1 MTR_8g072510 26.872 227 150 3 119 333 45 267 2.12e-17 85.1
MS.gene025832.t1 MTR_6g023070 30.693 303 173 11 17 291 23 316 3.15e-17 85.5
MS.gene025832.t1 MTR_2g096760 29.661 236 125 8 85 310 15 219 7.42e-17 83.6
MS.gene025832.t1 MTR_1g069110 24.194 434 241 17 78 476 9 389 1.58e-16 82.4
MS.gene025832.t1 MTR_8g062410 29.130 230 140 3 119 336 45 263 1.72e-16 82.4
MS.gene025832.t1 MTR_8g069880 20.538 409 265 8 119 501 42 416 2.55e-16 82.0
MS.gene025832.t1 MTR_6g027840 30.830 253 150 5 78 310 207 454 2.96e-16 82.0
MS.gene025832.t1 MTR_6g027840 32.065 184 103 7 41 224 308 469 1.58e-11 67.4
MS.gene025832.t1 MTR_8g068990 25.597 293 169 6 119 397 47 304 3.42e-16 81.6
MS.gene025832.t1 MTR_6g022830 29.582 311 177 10 17 291 75 379 3.42e-16 82.4
MS.gene025832.t1 MTR_7g099570 30.924 249 140 7 119 340 44 287 1.66e-15 80.1
MS.gene025832.t1 MTR_7g099570 28.571 196 126 4 112 297 5 196 4.43e-12 68.9
MS.gene025832.t1 MTR_5g085480 25.000 448 284 11 78 486 207 641 1.71e-15 80.1
MS.gene025832.t1 MTR_5g085480 26.708 322 169 14 40 302 86 399 2.79e-13 73.2
MS.gene025832.t1 MTR_4g063830 31.034 232 138 7 82 296 13 239 9.71e-15 77.0
MS.gene025832.t1 MTR_5g043640 38.621 145 82 6 181 320 50 192 1.22e-14 74.3
MS.gene025832.t1 MTR_5g043640 37.143 140 81 5 154 290 58 193 1.29e-14 74.3
MS.gene025832.t1 MTR_5g043640 31.868 182 117 6 77 256 50 226 4.76e-13 69.7
MS.gene025832.t1 MTR_8g040930 23.873 377 226 11 127 472 2 348 1.44e-14 75.9
MS.gene025832.t1 MTR_8g041240 23.873 377 226 11 127 472 2 348 1.44e-14 75.9
MS.gene025832.t1 MTR_8g056020 31.532 222 116 10 123 313 139 355 1.99e-13 72.4
MS.gene025832.t1 MTR_1g089180 31.122 196 116 6 103 297 240 417 4.78e-12 68.6
MS.gene025832.t1 MTR_5g026800 35.366 164 97 5 120 283 15 169 5.06e-12 67.0
MS.gene025832.t1 MTR_1g100797 31.955 266 146 12 50 297 17 265 5.10e-12 68.6
MS.gene025832.t1 MTR_7g099580 29.560 159 101 4 119 267 47 204 9.50e-12 67.0
MS.gene025832.t1 MTR_2g438740 22.892 498 277 16 43 495 111 546 1.11e-11 67.8
MS.gene025832.t1 MTR_4g021880 31.220 205 115 8 110 295 126 323 2.42e-11 66.2
MS.gene025832.t1 MTR_1g112830 29.474 190 131 3 121 310 140 326 3.51e-11 66.2
MS.gene025832.t1 MTR_4g021880 31.220 205 115 8 110 295 126 323 6.43e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025832.t1 AT2G31820 74.234 555 133 5 1 546 109 662 0.0 825
MS.gene025832.t1 AT1G05640 71.199 559 148 6 1 546 69 627 0.0 793
MS.gene025832.t1 AT5G60070 56.711 529 208 8 35 546 24 548 0.0 558
MS.gene025832.t1 AT1G07710 57.170 530 212 5 31 546 15 543 0.0 548
MS.gene025832.t1 AT1G07710 57.170 530 212 5 31 546 15 543 0.0 548
MS.gene025832.t1 AT5G02620 50.287 523 242 6 35 546 9 524 1.48e-162 473
MS.gene025832.t1 AT5G02620 50.287 523 242 6 35 546 9 524 1.48e-162 473
MS.gene025832.t1 AT5G02620 50.287 523 242 6 35 546 9 524 1.48e-162 473
MS.gene025832.t1 AT5G02620 48.352 546 241 7 35 546 9 547 1.92e-157 461
MS.gene025832.t1 AT5G02620 48.352 546 241 7 35 546 9 547 1.92e-157 461
MS.gene025832.t1 AT3G12360 42.329 541 275 7 31 546 50 578 4.72e-127 384
MS.gene025832.t1 AT3G12360 42.329 541 275 7 31 546 62 590 5.09e-127 384
MS.gene025832.t1 AT2G01680 42.708 480 254 7 50 513 17 491 1.70e-123 373
MS.gene025832.t1 AT2G01680 28.796 191 131 2 47 237 98 283 8.46e-12 68.2
MS.gene025832.t1 AT3G09550 41.651 545 276 9 31 546 83 614 1.64e-119 365
MS.gene025832.t1 AT3G09550 41.651 545 276 9 31 546 76 607 1.69e-119 365
MS.gene025832.t1 AT3G09550 41.651 545 276 9 31 546 76 607 1.69e-119 365
MS.gene025832.t1 AT5G54710 28.797 507 326 13 43 534 102 588 8.16e-44 164
MS.gene025832.t1 AT5G54710 28.797 507 326 13 43 534 147 633 1.75e-43 164
MS.gene025832.t1 AT5G54710 25.000 312 179 11 43 317 18 311 9.18e-13 71.2
MS.gene025832.t1 AT1G34050 27.122 483 308 12 43 513 88 538 3.52e-38 148
MS.gene025832.t1 AT2G24600 25.773 485 319 15 43 502 71 539 1.46e-35 141
MS.gene025832.t1 AT2G24600 25.773 485 319 15 43 502 71 539 1.46e-35 141
MS.gene025832.t1 AT1G10340 25.470 479 313 13 46 498 74 534 2.31e-35 140
MS.gene025832.t1 AT1G10340 24.950 501 316 13 47 498 41 530 9.40e-35 138
MS.gene025832.t1 AT4G03500 26.539 471 317 9 43 493 136 597 3.17e-33 134
MS.gene025832.t1 AT4G03500 26.840 231 125 6 110 297 96 325 3.28e-12 69.7
MS.gene025832.t1 AT4G03500 26.539 471 317 9 43 493 113 574 3.49e-33 134
MS.gene025832.t1 AT4G03500 26.840 231 125 6 110 297 73 302 3.39e-12 69.7
MS.gene025832.t1 AT4G03500 26.539 471 317 9 43 493 113 574 3.49e-33 134
MS.gene025832.t1 AT4G03500 26.840 231 125 6 110 297 73 302 3.39e-12 69.7
MS.gene025832.t1 AT5G50140 26.389 504 303 20 33 498 17 490 1.92e-29 122
MS.gene025832.t1 AT1G03670 24.520 469 288 9 41 478 144 577 1.76e-27 117
MS.gene025832.t1 AT1G03670 29.293 198 133 3 108 298 64 261 1.09e-14 77.4
MS.gene025832.t1 AT4G03480 28.191 376 221 9 78 435 309 653 1.86e-26 114
MS.gene025832.t1 AT4G03480 24.333 300 187 8 31 297 140 432 1.76e-13 73.6
MS.gene025832.t1 AT4G03480 28.191 376 221 9 78 435 312 656 1.98e-26 114
MS.gene025832.t1 AT4G03480 24.092 303 187 8 31 297 140 435 3.98e-13 72.8
MS.gene025832.t1 AT4G03470 26.494 502 311 14 43 532 201 656 8.04e-26 112
MS.gene025832.t1 AT4G03460 25.659 417 280 10 43 435 82 492 6.70e-25 109
MS.gene025832.t1 AT4G03460 25.659 417 280 10 43 435 114 524 8.83e-25 108
MS.gene025832.t1 AT4G03460 26.316 266 170 8 50 297 53 310 2.35e-13 73.2
MS.gene025832.t1 AT4G14390 25.370 540 318 13 43 512 113 637 1.94e-24 108
MS.gene025832.t1 AT4G14390 25.370 540 318 13 43 512 132 656 2.29e-24 107
MS.gene025832.t1 AT4G03490 25.536 466 301 13 43 501 144 570 4.27e-24 107
MS.gene025832.t1 AT5G54700 26.718 393 203 14 170 544 17 342 4.28e-24 103
MS.gene025832.t1 AT4G03490 25.536 466 301 13 43 501 144 570 5.37e-24 107
MS.gene025832.t1 AT4G03490 25.536 466 301 13 43 501 134 560 5.89e-24 106
MS.gene025832.t1 AT4G14390 25.508 541 317 14 43 512 132 657 1.67e-23 105
MS.gene025832.t1 AT4G10720 25.281 356 226 8 119 455 40 374 2.39e-22 100
MS.gene025832.t1 AT4G03490 22.338 479 316 11 42 501 71 512 3.07e-22 101
MS.gene025832.t1 AT4G03490 22.338 479 316 11 42 501 81 522 4.05e-22 100
MS.gene025832.t1 AT4G10720 27.027 296 182 5 119 398 40 317 9.83e-21 95.5
MS.gene025832.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.30e-20 95.9
MS.gene025832.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.36e-11 67.4
MS.gene025832.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.30e-20 95.9
MS.gene025832.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.36e-11 67.4
MS.gene025832.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.30e-20 95.9
MS.gene025832.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.36e-11 67.4
MS.gene025832.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.30e-20 95.9
MS.gene025832.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.36e-11 67.4
MS.gene025832.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.30e-20 95.9
MS.gene025832.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.36e-11 67.4
MS.gene025832.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.30e-20 95.9
MS.gene025832.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.36e-11 67.4
MS.gene025832.t1 AT4G05040 27.053 414 238 13 41 435 195 563 1.30e-20 95.9
MS.gene025832.t1 AT4G05040 26.214 206 129 3 74 278 74 257 1.36e-11 67.4
MS.gene025832.t1 AT4G03450 26.923 494 285 19 42 485 104 571 2.06e-20 95.5
MS.gene025832.t1 AT4G03450 27.255 499 277 20 42 485 104 571 2.53e-20 95.1
MS.gene025832.t1 AT2G24600 24.839 467 284 16 43 485 71 494 6.72e-20 93.6
MS.gene025832.t1 AT2G24600 24.839 467 284 16 43 485 71 494 6.72e-20 93.6
MS.gene025832.t1 AT4G14400 25.490 459 295 10 69 512 205 631 1.05e-19 93.6
MS.gene025832.t1 AT4G03440 24.838 463 282 14 69 510 260 677 1.12e-19 93.6
MS.gene025832.t1 AT4G03440 25.085 295 193 9 31 302 108 397 3.97e-12 69.7
MS.gene025832.t1 AT4G03440 24.838 463 282 14 69 510 253 670 1.40e-19 93.2
MS.gene025832.t1 AT4G03440 25.085 295 193 9 31 302 101 390 4.62e-12 69.3
MS.gene025832.t1 AT4G03440 24.838 463 282 14 69 510 253 670 1.40e-19 93.2
MS.gene025832.t1 AT4G03440 25.085 295 193 9 31 302 101 390 4.62e-12 69.3
MS.gene025832.t1 AT4G14400 25.490 459 295 10 69 512 139 565 1.61e-19 92.8
MS.gene025832.t1 AT4G14400 25.490 459 295 10 69 512 139 565 1.61e-19 92.8
MS.gene025832.t1 AT3G01750 31.271 291 162 9 43 299 105 391 5.93e-19 90.9
MS.gene025832.t1 AT3G01750 31.271 291 162 9 43 299 105 391 5.93e-19 90.9
MS.gene025832.t1 AT5G15500 26.460 291 180 5 119 393 41 313 2.10e-17 85.5
MS.gene025832.t1 AT5G51160 25.846 325 197 10 147 438 44 357 4.93e-17 84.0
MS.gene025832.t1 AT1G14500 28.632 234 150 3 119 335 40 273 7.31e-16 80.5
MS.gene025832.t1 AT5G54700 25.434 346 190 12 181 497 34 340 7.42e-16 80.9
MS.gene025832.t1 AT3G04140 27.055 292 170 6 43 295 102 389 1.05e-15 80.9
MS.gene025832.t1 AT2G03430 38.571 140 80 5 181 316 43 180 5.37e-15 75.1
MS.gene025832.t1 AT2G03430 31.579 190 123 6 77 264 43 227 4.98e-13 69.3
MS.gene025832.t1 AT2G03430 39.437 142 75 6 154 290 51 186 3.08e-12 67.0
MS.gene025832.t1 AT4G14390 24.762 420 235 11 43 392 113 521 6.97e-15 77.8
MS.gene025832.t1 AT5G54620 28.205 234 153 3 117 335 38 271 9.05e-15 77.0
MS.gene025832.t1 AT5G54610 27.895 190 127 2 119 298 40 229 2.10e-14 75.9
MS.gene025832.t1 AT5G54610 28.638 213 137 5 68 267 22 232 4.12e-12 68.6
MS.gene025832.t1 AT1G14480 23.636 385 236 8 119 448 40 421 2.59e-14 75.9
MS.gene025832.t1 AT2G28840 32.487 197 100 5 120 310 50 219 4.53e-14 75.1
MS.gene025832.t1 AT3G04710 31.925 213 136 6 110 320 49 254 1.85e-12 70.1
MS.gene025832.t1 AT4G19150 30.460 174 84 3 120 293 20 156 2.52e-12 67.4
MS.gene025832.t1 AT3G04710 31.683 202 130 5 110 310 49 243 3.47e-11 65.9
MS.gene025832.t1 AT3G04710 31.683 202 130 5 110 310 273 467 3.94e-11 66.2
MS.gene025832.t1 AT5G57740 30.374 214 110 8 119 296 54 264 4.23e-11 65.9

Find 134 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGGCATTATTCATTTCTT+TGG 0.247268 7.1:-52376 MS.gene025832:CDS
GAAGGGATCATAACCATTTC+TGG 0.256676 7.1:+56391 None:intergenic
AGGATCCAAGCACCGGATTT+AGG 0.271641 7.1:-56023 MS.gene025832:CDS
TGACGTCGTGAATCTCCTTT+TGG 0.292532 7.1:-56151 MS.gene025832:CDS
TTTAGTTGCTTTGCTGCATT+TGG 0.317628 7.1:+52690 None:intergenic
CCTTCACTCTGCGGCTAGAA+TGG 0.320595 7.1:-56079 MS.gene025832:CDS
CAAGAGGATGTACGCACTTT+AGG 0.320769 7.1:-52028 None:intergenic
TTCTGAGAACGGACATGATT+TGG 0.325398 7.1:-56465 MS.gene025832:CDS
AGCCCCAGCATCCCTCATTA+TGG 0.329160 7.1:+52740 None:intergenic
TGCGGCTAGAATGGGGCATT+TGG 0.335820 7.1:-56070 MS.gene025832:CDS
TAACATCAATGCTACTAATA+AGG 0.340466 7.1:-52817 MS.gene025832:CDS
CTTCACTCTGCGGCTAGAAT+GGG 0.352049 7.1:-56078 MS.gene025832:CDS
GACAGTCTTACCATTGTTCC+TGG 0.365757 7.1:+56101 None:intergenic
TTAAATCTAGAGGATAATAA+AGG 0.376597 7.1:-55907 MS.gene025832:CDS
GCTTCTATTGTCGCCAGAAA+TGG 0.381329 7.1:-56404 MS.gene025832:CDS
TTCATTTAGCTGCTCGGGCT+GGG 0.381699 7.1:-56589 MS.gene025832:CDS
GGAGAGGCAGCTGAGCTTCA+TGG 0.386167 7.1:-56666 MS.gene025832:CDS
TATGTTGAAGAGAAAGTAAA+TGG 0.386691 7.1:-52465 MS.gene025832:CDS
CTGCATTTGGAGGTTTCCCT+TGG 0.389760 7.1:+52703 None:intergenic
GCTTGGATCCTTGCTTAGTA+AGG 0.394921 7.1:+56035 None:intergenic
TTCTCTCACTTACGTGGTAG+TGG 0.396214 7.1:-52235 MS.gene025832:CDS
TCTGGACCCTCATGCCCGTC+TGG 0.398040 7.1:+52613 None:intergenic
CTTCCATGTTGCTGCAAAGC+AGG 0.398447 7.1:-56372 MS.gene025832:CDS
CAGAGGTAATCGCATTGTTC+AGG 0.401763 7.1:+52553 None:intergenic
GTCTCCATAATGAGGGATGC+TGG 0.403600 7.1:-52744 MS.gene025832:CDS
TGCAAAGAAGGGCCGTAATC+AGG 0.408212 7.1:-55863 MS.gene025832:intron
ATTCATTTAGCTGCTCGGGC+TGG 0.412041 7.1:-56590 MS.gene025832:CDS
TACCGATTCATTTAGCTGCT+CGG 0.412349 7.1:-56595 MS.gene025832:CDS
GCTATATATGCTACAGTGAT+TGG 0.413428 7.1:-52192 MS.gene025832:CDS
AGTTGTTGTGATTGAGCAAA+AGG 0.415505 7.1:-52331 MS.gene025832:CDS
TGCCCGTCTGGCGTGTCTGT+TGG 0.420613 7.1:+52625 None:intergenic
AGTTGCTTTGCTGCATTTGG+AGG 0.423178 7.1:+52693 None:intergenic
CTCATTATGGAGACAAGATC+TGG 0.425108 7.1:+52753 None:intergenic
TTCTCAGAAGCGACGTAAAG+AGG 0.435647 7.1:+56479 None:intergenic
AGATTTAAAACTGCTCGGTC+AGG 0.438182 7.1:+55922 None:intergenic
ACCGATTCATTTAGCTGCTC+GGG 0.450097 7.1:-56594 MS.gene025832:CDS
TCTCCATAATGAGGGATGCT+GGG 0.451849 7.1:-52743 MS.gene025832:CDS
TTTCTCTTCAACATATTGAC+CGG 0.455311 7.1:+52473 None:intergenic
CATTGTTCAGGCCACTTATG+TGG 0.455464 7.1:+52565 None:intergenic
ATTGCATATTGCTGCAAAGA+AGG 0.465601 7.1:-55875 MS.gene025832:CDS
CATGGAGAAAGAACGGCTTT+CGG 0.467112 7.1:+52089 None:intergenic
CATTAACAAGCTCATGTGGC+TGG 0.467378 7.1:-52286 MS.gene025832:CDS
ACAAGTCCTTTGCTGCCTCA+TGG 0.467607 7.1:+56531 None:intergenic
GCCCGAGCAGCTAAATGAAT+CGG 0.469940 7.1:+56593 None:intergenic
TGAGGCAGCAAAGGACTTGT+TGG 0.470727 7.1:-56528 MS.gene025832:CDS
CTGGCGTGTCTGTTGGAGTT+GGG 0.471422 7.1:+52632 None:intergenic
TCTGTAGTCATGGCCAAGTT+GGG 0.474009 7.1:+56222 None:intergenic
TAGCGAGATACTCAAATACT+TGG 0.475702 7.1:-56438 MS.gene025832:CDS
TCTCAGAAGCGACGTAAAGA+GGG 0.479972 7.1:+56480 None:intergenic
GCAGCCATCTTCACTGTCCC+CGG 0.481349 7.1:-52492 MS.gene025832:CDS
GAGAGGCAGCTGAGCTTCAT+GGG 0.489122 7.1:-56665 MS.gene025832:CDS
ATCTGTAGTCATGGCCAAGT+TGG 0.490000 7.1:+56221 None:intergenic
TGAAGGCAATGGAAATGAAA+AGG 0.490893 7.1:+52259 None:intergenic
TCAGTCCTAAATCCGGTGCT+TGG 0.504143 7.1:+56018 None:intergenic
TCTGGCGTGTCTGTTGGAGT+TGG 0.506059 7.1:+52631 None:intergenic
TTTCTTATCAGTCCTAAATC+CGG 0.506072 7.1:+56011 None:intergenic
CACTACACATGGCTGTGAAA+GGG 0.507134 7.1:-55978 MS.gene025832:CDS
TAAAAGCAAACACCTGATTA+CGG 0.507872 7.1:+55851 None:intergenic
GCTGCAAAGCAGGGTCATCT+TGG 0.508636 7.1:-56362 MS.gene025832:intron
TTGATAATGCTCTCTACAAT+CGG 0.508727 7.1:-52165 MS.gene025832:CDS
CACGACGTCAATGTGACCTT+GGG 0.509692 7.1:+56164 None:intergenic
CAGATCTTGTCTCCATAATG+AGG 0.509836 7.1:-52752 MS.gene025832:CDS
ATTTGGAGGTTTCCCTTGGT+CGG 0.511494 7.1:+52707 None:intergenic
CTTTACGTCGCTTCTGAGAA+CGG 0.514029 7.1:-56476 MS.gene025832:CDS
TGTGTGTAAAGCAGTTGAAT+TGG 0.520334 7.1:+56194 None:intergenic
CTGAAGAAACTCCACATAAG+TGG 0.520816 7.1:-52576 MS.gene025832:CDS
CTCCAACAGACACGCCAGAC+GGG 0.522130 7.1:-52627 MS.gene025832:CDS
ATCAATGCTACTAATAAGGC+GGG 0.522866 7.1:-52813 MS.gene025832:CDS
GGTAAGTCGCCACGTTTCCC+AGG 0.525989 7.1:+56614 None:intergenic
CCTCTAGATTTAAAACTGCT+CGG 0.526757 7.1:+55917 None:intergenic
ATTCATTTCTTTGGCTGTCG+TGG 0.528156 7.1:-52367 MS.gene025832:CDS
GCACTACACATGGCTGTGAA+AGG 0.531620 7.1:-55979 MS.gene025832:CDS
ATTCACCGTTCAAAATCTCC+TGG 0.533489 7.1:+52052 None:intergenic
GATAGATGAGACAAAATTGA+GGG 0.537415 7.1:-52112 MS.gene025832:CDS
CACGTAAGTGAGAGAAATGA+AGG 0.544789 7.1:+52242 None:intergenic
GGTTTGAATCTGATTCCAAA+AGG 0.544875 7.1:+56136 None:intergenic
TTGACCGGGGACAGTGAAGA+TGG 0.544944 7.1:+52488 None:intergenic
TCACGACGTCAATGTGACCT+TGG 0.547725 7.1:+56163 None:intergenic
AAGAAGAGCAAGGAATCACC+TGG 0.548629 7.1:-56632 MS.gene025832:CDS
CTGCTTTGCAGCAACATGGA+AGG 0.550006 7.1:+56373 None:intergenic
TTGCATATTGCTGCAAAGAA+GGG 0.553144 7.1:-55874 MS.gene025832:CDS
AAGTGAGAGGAAGAAGAGCA+AGG 0.553626 7.1:-56642 MS.gene025832:CDS
TCTCTCACTTACGTGGTAGT+GGG 0.555983 7.1:-52234 MS.gene025832:CDS
TTCTCTTCAACATATTGACC+GGG 0.561606 7.1:+52474 None:intergenic
AACAGCAACAACAGTAGCAG+AGG 0.562112 7.1:+52536 None:intergenic
TGTGAAAGCCTTACTAAGCA+AGG 0.562203 7.1:-56043 MS.gene025832:CDS
TGCTTTGCAGCAACATGGAA+GGG 0.565820 7.1:+56374 None:intergenic
TTCCATGTTGCTGCAAAGCA+GGG 0.566001 7.1:-56371 MS.gene025832:CDS
CCAAAGAAATGAATAATGCC+AGG 0.566227 7.1:+52376 None:intergenic
TGGAGGTTTCCCTTGGTCGG+TGG 0.569501 7.1:+52710 None:intergenic
AGTGAGAGAAATGAAGGCAA+TGG 0.571730 7.1:+52248 None:intergenic
CATTTCTTTGGCTGTCGTGG+TGG 0.572639 7.1:-52364 MS.gene025832:CDS
GACCCTGCTTTGCAGCAACA+TGG 0.573006 7.1:+56369 None:intergenic
TTGTCATTAACAAGCTCATG+TGG 0.574156 7.1:-52290 MS.gene025832:CDS
CCATTCTAGCCGCAGAGTGA+AGG 0.575265 7.1:+56079 None:intergenic
CTAAGCAAGGATCCAAGCAC+CGG 0.576042 7.1:-56030 MS.gene025832:CDS
TCAAAACCATGAGGCAGCAA+AGG 0.578528 7.1:-56537 MS.gene025832:CDS
CGCCGCTTGTTATCAACGGA+GGG 0.579660 7.1:-52843 MS.gene025832:CDS
CTCCATAATGAGGGATGCTG+GGG 0.582844 7.1:-52742 MS.gene025832:CDS
AGACACGCCAGACGGGCATG+AGG 0.585010 7.1:-52620 MS.gene025832:CDS
TTCACTCTGCGGCTAGAATG+GGG 0.586636 7.1:-56077 MS.gene025832:CDS
GCTGTTAATTCCACCGACCA+AGG 0.589761 7.1:-52720 MS.gene025832:CDS
CTGGTCTGATGTATGCGACA+TGG 0.589809 7.1:+52071 None:intergenic
ATTGGACAAATCTGTAGTCA+TGG 0.593370 7.1:+56212 None:intergenic
GGATAGATGAGACAAAATTG+AGG 0.593412 7.1:-52113 MS.gene025832:CDS
TTGGCAAAGCAGAACCTCGA+GGG 0.594567 7.1:-56509 MS.gene025832:CDS
AGGTCAAACTGCACTACACA+TGG 0.594858 7.1:-55989 MS.gene025832:CDS
CAGAATGACACAATAGCACA+TGG 0.602461 7.1:+52140 None:intergenic
CATCAATGCTACTAATAAGG+CGG 0.608173 7.1:-52814 MS.gene025832:CDS
GACACGCCAGACGGGCATGA+GGG 0.616315 7.1:-52619 MS.gene025832:CDS
CTTCATTTCTCTCACTTACG+TGG 0.617532 7.1:-52241 MS.gene025832:CDS
CATGTCGCATACATCAGACC+AGG 0.620062 7.1:-52070 MS.gene025832:CDS
AGATCTTGTCTCCATAATGA+GGG 0.621157 7.1:-52751 MS.gene025832:CDS
CTCAGAAGCGACGTAAAGAG+GGG 0.621468 7.1:+56481 None:intergenic
TACCCTCCGTTGATAACAAG+CGG 0.621861 7.1:+52841 None:intergenic
CTGTTAATTCCACCGACCAA+GGG 0.622584 7.1:-52719 MS.gene025832:CDS
GGATTTAGGACTGATAAGAA+AGG 0.622915 7.1:-56009 MS.gene025832:CDS
CCGCCGCTTGTTATCAACGG+AGG 0.624596 7.1:-52844 MS.gene025832:CDS
ACTCCAACAGACACGCCAGA+CGG 0.625293 7.1:-52628 MS.gene025832:CDS
TATGCGACATGGAGAAAGAA+CGG 0.627806 7.1:+52082 None:intergenic
TTACACACAGCTGCTACCCA+AGG 0.629783 7.1:-56180 MS.gene025832:CDS
TGAGCTTCATGGGAAGTGAG+AGG 0.638406 7.1:-56655 MS.gene025832:CDS
TGTCCGCCGCTTGTTATCAA+CGG 0.646577 7.1:-52847 MS.gene025832:CDS
AAGGAATCACCTGGGAAACG+TGG 0.653514 7.1:-56623 MS.gene025832:CDS
TGGCAAAGCAGAACCTCGAG+GGG 0.666459 7.1:-56508 MS.gene025832:CDS
GCTATTGTGTCATTCTGCAT+AGG 0.668692 7.1:-52134 MS.gene025832:CDS
GTTGGCAAAGCAGAACCTCG+AGG 0.692209 7.1:-56510 MS.gene025832:CDS
AGAAGAGCAAGGAATCACCT+GGG 0.695083 7.1:-56631 MS.gene025832:CDS
TCTCTTCAACATATTGACCG+GGG 0.706481 7.1:+52475 None:intergenic
TAAGACTGTCCTTCACTCTG+CGG 0.709234 7.1:-56088 MS.gene025832:CDS
GATACTACTTCAAAACCATG+AGG 0.726605 7.1:-56546 MS.gene025832:CDS
GGCAAAGCAGAACCTCGAGG+GGG 0.735780 7.1:-56507 MS.gene025832:CDS
CCTCCGTTGATAACAAGCGG+CGG 0.744744 7.1:+52844 None:intergenic
TAGTGGGATCACACTCACGA+TGG 0.748360 7.1:-52218 MS.gene025832:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTCATTATTTATTGT+TGG - chr7.1:55652-55671 MS.gene025832:intron 10.0%
!! TATATATATATATATATCGT+AGG - chr7.1:54561-54580 MS.gene025832:intron 10.0%
!! ATAACATAAGAGAAATATAT+AGG + chr7.1:53911-53930 None:intergenic 15.0%
!! TAACATAAGAGAAATATATA+GGG + chr7.1:53910-53929 None:intergenic 15.0%
!! TCAAATTATCATAATTCATA+TGG + chr7.1:55389-55408 None:intergenic 15.0%
!!! AAACATAAGAATTTTAACTT+GGG - chr7.1:54079-54098 MS.gene025832:intron 15.0%
!!! AATTGCATTCATATTTATTT+TGG - chr7.1:54653-54672 MS.gene025832:intron 15.0%
!!! ATATTTTCATATAGCAATAA+TGG + chr7.1:54160-54179 None:intergenic 15.0%
!!! ATTATAATTCGTTTTATCTT+AGG - chr7.1:54599-54618 MS.gene025832:intron 15.0%
!!! TCTCAATAATTAGTTTATAA+AGG + chr7.1:52979-52998 None:intergenic 15.0%
!! AACAAAATGAATAACAAAGA+GGG + chr7.1:53983-54002 None:intergenic 20.0%
!! AACATAAGAGAAATATATAG+GGG + chr7.1:53909-53928 None:intergenic 20.0%
!! AACATTAATGAATCCTTAAT+CGG - chr7.1:55330-55349 MS.gene025832:intron 20.0%
!! ATGAATTAATAAGTAAGCAA+AGG + chr7.1:55642-55661 None:intergenic 20.0%
!! CCAAAAAAAAAAAAAGACTT+AGG + chr7.1:55130-55149 None:intergenic 20.0%
!! TAAAAGAACAAAAAATGATG+TGG + chr7.1:55499-55518 None:intergenic 20.0%
!! TATCAAACACAAAAAATATC+AGG + chr7.1:56360-56379 None:intergenic 20.0%
!! TATGTCTATAATAATGTCTT+CGG - chr7.1:53582-53601 MS.gene025832:intron 20.0%
!! TTAAATCTAGAGGATAATAA+AGG - chr7.1:52850-52869 MS.gene025832:CDS 20.0%
!!! CCAAAAAAGTATATTAACAA+TGG + chr7.1:54880-54899 None:intergenic 20.0%
!!! CCATTGTTAATATACTTTTT+TGG - chr7.1:54877-54896 MS.gene025832:intron 20.0%
!!! CCTAAGTCTTTTTTTTTTTT+TGG - chr7.1:55127-55146 MS.gene025832:intron 20.0%
!!! GAAACATAAGAATTTTAACT+TGG - chr7.1:54078-54097 MS.gene025832:intron 20.0%
!!! GATTCATTAATGTTTTTCAT+GGG + chr7.1:55324-55343 None:intergenic 20.0%
!!! TACAGTTATGCTTATATTTT+AGG + chr7.1:53106-53125 None:intergenic 20.0%
!!! TCATTTTTTCACTTTTAAGT+TGG - chr7.1:54739-54758 MS.gene025832:intron 20.0%
!!! TTTCAATATTTATTCTGAAG+TGG - chr7.1:55869-55888 MS.gene025832:CDS 20.0%
!!! TTTTGTTCTTTTAATTAACC+AGG - chr7.1:55506-55525 MS.gene025832:intron 20.0%
! AAAAAAAAAAGACTTAGGAG+AGG + chr7.1:55125-55144 None:intergenic 25.0%
! AAATTATGGGTTTCTTACAT+GGG + chr7.1:53389-53408 None:intergenic 25.0%
! ACATAAGAGAAATATATAGG+GGG + chr7.1:53908-53927 None:intergenic 25.0%
! AGAAACAACTATATAGAAGA+AGG - chr7.1:53719-53738 MS.gene025832:intron 25.0%
! AGAAATCAGACTGATATTAA+AGG - chr7.1:53654-53673 MS.gene025832:intron 25.0%
! AGTTTACAATGTAGAAAAGA+TGG - chr7.1:53156-53175 MS.gene025832:intron 25.0%
! ATAAGAACAAGTATTAGACA+TGG + chr7.1:53036-53055 None:intergenic 25.0%
! CATAACTGTAAGTCATATTA+TGG - chr7.1:53116-53135 MS.gene025832:intron 25.0%
! GAACAAAATGAATAACAAAG+AGG + chr7.1:53984-54003 None:intergenic 25.0%
! TAAAAAACCCATTGATCATT+GGG + chr7.1:53317-53336 None:intergenic 25.0%
! TAACATCAATGCTACTAATA+AGG - chr7.1:55940-55959 MS.gene025832:CDS 25.0%
! TACATGAACAAAAAAAGTGA+TGG + chr7.1:55204-55223 None:intergenic 25.0%
! TATGTTGAAGAGAAAGTAAA+TGG - chr7.1:56292-56311 MS.gene025832:intron 25.0%
! TGGAATCAATAGAACAATTT+GGG - chr7.1:53420-53439 MS.gene025832:intron 25.0%
! TTCTTTCTTATGGCATTAAT+TGG - chr7.1:55244-55263 MS.gene025832:intron 25.0%
!! AAATTTTTCTGCAATGTCAA+GGG + chr7.1:55978-55997 None:intergenic 25.0%
!! GGATTCATTAATGTTTTTCA+TGG + chr7.1:55325-55344 None:intergenic 25.0%
!! TCAGTCTATTTTCTTTCTTA+TGG - chr7.1:55234-55253 MS.gene025832:intron 25.0%
!!! TCTTTTGAAGTTTGATTTCT+TGG - chr7.1:55356-55375 MS.gene025832:intron 25.0%
AAAAATCACAATGCAAGACA+AGG + chr7.1:55797-55816 None:intergenic 30.0%
AAAATCACAATGCAAGACAA+GGG + chr7.1:55796-55815 None:intergenic 30.0%
AAAATGAATAACAAAGAGGG+AGG + chr7.1:53980-53999 None:intergenic 30.0%
AAAATTACTCTCCACTATCT+TGG + chr7.1:55847-55866 None:intergenic 30.0%
AAATGAATAACAAAGAGGGA+GGG + chr7.1:53979-53998 None:intergenic 30.0%
AACGAAGTAGAAAACTATTG+TGG + chr7.1:55030-55049 None:intergenic 30.0%
ACAAAAAATATCAGGAAAGC+TGG + chr7.1:56352-56371 None:intergenic 30.0%
ACAAATTCAGAGTTCAGATT+TGG + chr7.1:55586-55605 None:intergenic 30.0%
ACGGTTATTGAAAAAACCAT+GGG - chr7.1:53510-53529 MS.gene025832:intron 30.0%
AGAAAAAAAGAATCTTGCAG+AGG - chr7.1:52486-52505 MS.gene025832:CDS 30.0%
AGTCTGATTTCTATCTAATG+GGG + chr7.1:53646-53665 None:intergenic 30.0%
ATAAAAGCTCCGATCTTATT+TGG - chr7.1:55276-55295 MS.gene025832:intron 30.0%
ATAGAAAATACTGCACATGA+TGG + chr7.1:53447-53466 None:intergenic 30.0%
CAACTATATAGAAGAAGGAA+TGG - chr7.1:53724-53743 MS.gene025832:intron 30.0%
CAGTCTGATTTCTATCTAAT+GGG + chr7.1:53647-53666 None:intergenic 30.0%
CATGTGAGAAATTAGCATTT+GGG + chr7.1:53860-53879 None:intergenic 30.0%
CTAAAAAACCCATTGATCAT+TGG + chr7.1:53318-53337 None:intergenic 30.0%
CTAGAGAAACCAAATAAGAT+CGG + chr7.1:55288-55307 None:intergenic 30.0%
CTGGAATCAATAGAACAATT+TGG - chr7.1:53419-53438 MS.gene025832:intron 30.0%
CTTGACATTGCAGAAAAATT+TGG - chr7.1:55977-55996 MS.gene025832:CDS 30.0%
GAAATTATGGGTTTCTTACA+TGG + chr7.1:53390-53409 None:intergenic 30.0%
GATAGATGAGACAAAATTGA+GGG - chr7.1:56645-56664 MS.gene025832:CDS 30.0%
TAAAAGCAAACACCTGATTA+CGG + chr7.1:52909-52928 None:intergenic 30.0%
TCAGTCTGATTTCTATCTAA+TGG + chr7.1:53648-53667 None:intergenic 30.0%
TTACAATGTAGAAAAGATGG+TGG - chr7.1:53159-53178 MS.gene025832:intron 30.0%
TTCACCTACAATTGATCATT+GGG + chr7.1:53249-53268 None:intergenic 30.0%
TTTACTCTATCCATCATGTA+AGG + chr7.1:53769-53788 None:intergenic 30.0%
TTTAGTTGAAAATAACCCCA+AGG + chr7.1:54118-54137 None:intergenic 30.0%
TTTCTCTTCAACATATTGAC+CGG + chr7.1:56287-56306 None:intergenic 30.0%
TTTCTTATCAGTCCTAAATC+CGG + chr7.1:52749-52768 None:intergenic 30.0%
! AAAGTAAATGGCTTTTCACT+TGG - chr7.1:56304-56323 MS.gene025832:intron 30.0%
! AATTTCTCACATGCCTTTTA+CGG - chr7.1:53867-53886 MS.gene025832:intron 30.0%
! AATTTTTCTGCAATGTCAAG+GGG + chr7.1:55977-55996 None:intergenic 30.0%
! AGCATCACTATTTTCAACTT+AGG + chr7.1:55415-55434 None:intergenic 30.0%
! ATGTTTTTCATGGGAATTGA+TGG + chr7.1:55315-55334 None:intergenic 30.0%
! CAAATTTTTCTGCAATGTCA+AGG + chr7.1:55979-55998 None:intergenic 30.0%
! CAGTATTTTCTATTTAGTCG+TGG - chr7.1:53454-53473 MS.gene025832:intron 30.0%
! CTTCAAAAGAATACCGATTA+AGG + chr7.1:55346-55365 None:intergenic 30.0%
! GAAGTTTGATTTCTTGGTTA+AGG - chr7.1:55362-55381 MS.gene025832:intron 30.0%
! GCAAAATGAAGAAATTTTGC+TGG - chr7.1:52801-52820 MS.gene025832:CDS 30.0%
! TGAAGAAATTTTGCTGGAAT+TGG - chr7.1:52807-52826 MS.gene025832:CDS 30.0%
!! ATTGTTCTATTGATTCCAGA+TGG + chr7.1:53418-53437 None:intergenic 30.0%
!! TAAAGTTGATACCAAGATAG+TGG - chr7.1:55833-55852 MS.gene025832:intron 30.0%
!! TTGATAATGCTCTCTACAAT+CGG - chr7.1:56592-56611 MS.gene025832:CDS 30.0%
!!! ATTTTTTGTGTTTGATAGCC+TGG - chr7.1:56363-56382 MS.gene025832:CDS 30.0%
!!! CTGCAAGATTCTTTTTTTCT+CGG + chr7.1:52486-52505 None:intergenic 30.0%
!!! GCTTATATTTTAGGATTACG+TGG + chr7.1:53097-53116 None:intergenic 30.0%
AAAAAAAGTGATGGCATCCA+AGG + chr7.1:55195-55214 None:intergenic 35.0%
AAATCACAATGCAAGACAAG+GGG + chr7.1:55795-55814 None:intergenic 35.0%
AAGAGAAATATATAGGGGGA+AGG + chr7.1:53904-53923 None:intergenic 35.0%
AATAACCACCCAATGATCAA+TGG - chr7.1:53238-53257 MS.gene025832:intron 35.0%
AATACATTGCCAAAGTAAGG+AGG + chr7.1:55475-55494 None:intergenic 35.0%
AATGAATAACAAAGAGGGAG+GGG + chr7.1:53978-53997 None:intergenic 35.0%
AGAGAAATATATAGGGGGAA+GGG + chr7.1:53903-53922 None:intergenic 35.0%
AGGGATTTCACTTTAACAAG+CGG - chr7.1:53695-53714 MS.gene025832:intron 35.0%
AGTAGTAGGTATAAGTTCCT+TGG - chr7.1:55175-55194 MS.gene025832:intron 35.0%
AGTTAGTATCCTCCTTACTT+TGG - chr7.1:55463-55482 MS.gene025832:intron 35.0%
AGTTGTTGTGATTGAGCAAA+AGG - chr7.1:56426-56445 MS.gene025832:CDS 35.0%
ATAACCACCCAATGATCAAT+GGG - chr7.1:53239-53258 MS.gene025832:intron 35.0%
ATCAATGCTACTAATAAGGC+GGG - chr7.1:55944-55963 MS.gene025832:CDS 35.0%
ATTGCATATTGCTGCAAAGA+AGG - chr7.1:52882-52901 MS.gene025832:intron 35.0%
ATTGGACAAATCTGTAGTCA+TGG + chr7.1:52548-52567 None:intergenic 35.0%
CAATTGTAGGTGAACATGAA+TGG - chr7.1:53255-53274 MS.gene025832:intron 35.0%
CACGGTTATTGAAAAAACCA+TGG - chr7.1:53509-53528 MS.gene025832:intron 35.0%
CAGATGGCAAAGGAAATTAT+GGG + chr7.1:53402-53421 None:intergenic 35.0%
CAGTAAAAACTACTTGCCTA+TGG - chr7.1:54359-54378 MS.gene025832:intron 35.0%
CATCAATGCTACTAATAAGG+CGG - chr7.1:55943-55962 MS.gene025832:CDS 35.0%
CCAAAGAAATGAATAATGCC+AGG + chr7.1:56384-56403 None:intergenic 35.0%
CCTGGCATTATTCATTTCTT+TGG - chr7.1:56381-56400 MS.gene025832:CDS 35.0%
CTACTCAAACCAGAGATAAA+TGG + chr7.1:55160-55179 None:intergenic 35.0%
GAAAATTCAATAGTCGAGGA+TGG + chr7.1:54928-54947 None:intergenic 35.0%
GATACTACTTCAAAACCATG+AGG - chr7.1:52211-52230 MS.gene025832:CDS 35.0%
GCATGTGAGAAATTAGCATT+TGG + chr7.1:53861-53880 None:intergenic 35.0%
GCTATATATGCTACAGTGAT+TGG - chr7.1:56565-56584 MS.gene025832:CDS 35.0%
GGAAATACATTGCCAAAGTA+AGG + chr7.1:55478-55497 None:intergenic 35.0%
GGATAGATGAGACAAAATTG+AGG - chr7.1:56644-56663 MS.gene025832:CDS 35.0%
GGTTGAAAATTCAATAGTCG+AGG + chr7.1:54932-54951 None:intergenic 35.0%
GGTTTGAATCTGATTCCAAA+AGG + chr7.1:52624-52643 None:intergenic 35.0%
GTTCACCTACAATTGATCAT+TGG + chr7.1:53250-53269 None:intergenic 35.0%
TAATAAGAGAGAAACAGACC+TGG + chr7.1:55527-55546 None:intergenic 35.0%
TAGCGAGATACTCAAATACT+TGG - chr7.1:52319-52338 MS.gene025832:CDS 35.0%
TAGTATGCACATACTTCCAT+AGG + chr7.1:54378-54397 None:intergenic 35.0%
TATAGAAGAAGGAATGGCAA+TGG - chr7.1:53730-53749 MS.gene025832:intron 35.0%
TGAACTCTGAATTTGTGAGA+GGG - chr7.1:55590-55609 MS.gene025832:intron 35.0%
TGAAGGCAATGGAAATGAAA+AGG + chr7.1:56501-56520 None:intergenic 35.0%
TGTGTGTAAAGCAGTTGAAT+TGG + chr7.1:52566-52585 None:intergenic 35.0%
TTCTCTTCAACATATTGACC+GGG + chr7.1:56286-56305 None:intergenic 35.0%
TTGCATATTGCTGCAAAGAA+GGG - chr7.1:52883-52902 MS.gene025832:intron 35.0%
TTGTCATTAACAAGCTCATG+TGG - chr7.1:56467-56486 MS.gene025832:CDS 35.0%
! ACCAAAAGTGCACACAATTT+AGG - chr7.1:54240-54259 MS.gene025832:intron 35.0%
! ATGAATGGCTTTTCAATTGC+TGG - chr7.1:53270-53289 MS.gene025832:intron 35.0%
! CCAAAAGTGCACACAATTTA+GGG - chr7.1:54241-54260 MS.gene025832:intron 35.0%
! CCTCTAGATTTAAAACTGCT+CGG + chr7.1:52843-52862 None:intergenic 35.0%
! CTTCTCGTTCATTTTCTACT+AGG + chr7.1:53208-53227 None:intergenic 35.0%
! GAAAAACAGAAGAGTTTTCG+TGG - chr7.1:52032-52051 MS.gene025832:CDS 35.0%
! GGATTTAGGACTGATAAGAA+AGG - chr7.1:52748-52767 MS.gene025832:CDS 35.0%
! TCGTATTCATGCACATTTTG+TGG + chr7.1:54472-54491 None:intergenic 35.0%
! TTATCTCTGGTTTGAGTAGT+AGG - chr7.1:55161-55180 MS.gene025832:intron 35.0%
! TTTAGTTGCTTTGCTGCATT+TGG + chr7.1:56070-56089 None:intergenic 35.0%
! TTTTGAACGGTGAATACAAG+AGG - chr7.1:56713-56732 MS.gene025832:CDS 35.0%
!! CTTATTAGCTTTGTACAGTC+TGG - chr7.1:55540-55559 MS.gene025832:intron 35.0%
!! GATTAAGAAGTGCTTGTACA+GGG - chr7.1:53676-53695 MS.gene025832:intron 35.0%
!!! GGTTTTTTCAATAACCGTGA+TGG + chr7.1:53508-53527 None:intergenic 35.0%
!!! TTCAGTATGGGTTGTTTTTC+AGG + chr7.1:55772-55791 None:intergenic 35.0%
!!! TTGTACAGTCTGGTTTGTTT+TGG - chr7.1:55550-55569 MS.gene025832:intron 35.0%
AAAACCCATTGATCATTGGG+TGG + chr7.1:53314-53333 None:intergenic 40.0%
AAAATATAGTCCCTGCTCCA+AGG - chr7.1:54173-54192 MS.gene025832:intron 40.0%
AAGAAGGAATGGCAATGGTT+GGG - chr7.1:53735-53754 MS.gene025832:intron 40.0%
AAGGAGAAATAATCTGCAGG+AGG + chr7.1:55623-55642 None:intergenic 40.0%
ACAAGCTCAAATAACTCCCA+TGG + chr7.1:53529-53548 None:intergenic 40.0%
ACATAACAACTAAGCACACC+CGG + chr7.1:53567-53586 None:intergenic 40.0%
ACCACCCAATGATCAATTGT+AGG - chr7.1:53242-53261 MS.gene025832:intron 40.0%
ACCTACAATTGATCATTGGG+TGG + chr7.1:53246-53265 None:intergenic 40.0%
ACGTGAAAGTCACACATTAC+CGG - chr7.1:55054-55073 MS.gene025832:intron 40.0%
ACTAAAATCTGAAGACAGGC+CGG + chr7.1:55076-55095 None:intergenic 40.0%
AGAAATTAGCATTTGGGCTC+GGG + chr7.1:53854-53873 None:intergenic 40.0%
AGTGAGAGAAATGAAGGCAA+TGG + chr7.1:56512-56531 None:intergenic 40.0%
ATCATGCTAATCGAGATACC+AGG + chr7.1:54298-54317 None:intergenic 40.0%
ATGAGCGAAGAAGAGAGATA+AGG + chr7.1:53937-53956 None:intergenic 40.0%
ATTCACCGTTCAAAATCTCC+TGG + chr7.1:56708-56727 None:intergenic 40.0%
ATTCATTTCTTTGGCTGTCG+TGG - chr7.1:56390-56409 MS.gene025832:CDS 40.0%
CAAACCTTGCAAAAATAGCC+AGG - chr7.1:52638-52657 MS.gene025832:CDS 40.0%
CACGTAAGTGAGAGAAATGA+AGG + chr7.1:56518-56537 None:intergenic 40.0%
CAGAATGACACAATAGCACA+TGG + chr7.1:56620-56639 None:intergenic 40.0%
CAGATCTTGTCTCCATAATG+AGG - chr7.1:56005-56024 MS.gene025832:CDS 40.0%
CCAGATGGCAAAGGAAATTA+TGG + chr7.1:53403-53422 None:intergenic 40.0%
CCATAATTTCCTTTGCCATC+TGG - chr7.1:53400-53419 MS.gene025832:intron 40.0%
CGCAACTAAAATCTGAAGAC+AGG + chr7.1:55080-55099 None:intergenic 40.0%
CTCATTATGGAGACAAGATC+TGG + chr7.1:56007-56026 None:intergenic 40.0%
CTGAACTCTGAATTTGTGAG+AGG - chr7.1:55589-55608 MS.gene025832:intron 40.0%
CTGAAGAAACTCCACATAAG+TGG - chr7.1:56181-56200 MS.gene025832:CDS 40.0%
CTTCATTTCTCTCACTTACG+TGG - chr7.1:56516-56535 MS.gene025832:CDS 40.0%
GAAGGGATCATAACCATTTC+TGG + chr7.1:52369-52388 None:intergenic 40.0%
GACAAGGACAAACTCAATAC+AGG - chr7.1:54499-54518 MS.gene025832:intron 40.0%
GAGAAATTAGCATTTGGGCT+CGG + chr7.1:53855-53874 None:intergenic 40.0%
GCAAAAATAGCCAGGAACAA+TGG - chr7.1:52646-52665 MS.gene025832:CDS 40.0%
GCAAAGGAGAAATAATCTGC+AGG + chr7.1:55626-55645 None:intergenic 40.0%
GGGTTGAATTATCTGTCCTT+GGG - chr7.1:54099-54118 MS.gene025832:intron 40.0%
GGTTGAATTATCTGTCCTTG+GGG - chr7.1:54100-54119 MS.gene025832:intron 40.0%
GTCAGAGTTATAGTGAGACA+TGG + chr7.1:52464-52483 None:intergenic 40.0%
TATGCGACATGGAGAAAGAA+CGG + chr7.1:56678-56697 None:intergenic 40.0%
TCTAATGGGGTTCCTATCAT+AGG + chr7.1:53633-53652 None:intergenic 40.0%
TCTCAGCTGTATCTTCTTTC+TGG - chr7.1:54854-54873 MS.gene025832:intron 40.0%
TCTCTTCAACATATTGACCG+GGG + chr7.1:56285-56304 None:intergenic 40.0%
TGAATACGAACACAGAGACA+AGG - chr7.1:54483-54502 MS.gene025832:intron 40.0%
TGAGCGAAGAAGAGAGATAA+GGG + chr7.1:53936-53955 None:intergenic 40.0%
TGTGAAAGCCTTACTAAGCA+AGG - chr7.1:52714-52733 MS.gene025832:CDS 40.0%
! AGATTTAAAACTGCTCGGTC+AGG + chr7.1:52838-52857 None:intergenic 40.0%
! CCCTAAATTGTGTGCACTTT+TGG + chr7.1:54244-54263 None:intergenic 40.0%
! GAAGAGTTTTCGTGGATTCA+TGG - chr7.1:52040-52059 MS.gene025832:CDS 40.0%
! GCTATTGTGTCATTCTGCAT+AGG - chr7.1:56623-56642 MS.gene025832:CDS 40.0%
! TCAGACCAGGAGATTTTGAA+CGG - chr7.1:56700-56719 MS.gene025832:CDS 40.0%
! TCAGCTTCTTAGCGATTTTC+TGG + chr7.1:56165-56184 None:intergenic 40.0%
! TGGGTTGAATTATCTGTCCT+TGG - chr7.1:54098-54117 MS.gene025832:intron 40.0%
! TTCTGAGAACGGACATGATT+TGG - chr7.1:52292-52311 MS.gene025832:CDS 40.0%
!! ATTATGGCTTGTTTGCACAC+TGG - chr7.1:53132-53151 MS.gene025832:intron 40.0%
!! CTATTGATTCCAGATGGCAA+AGG + chr7.1:53412-53431 None:intergenic 40.0%
!! GGATTAAGAAGTGCTTGTAC+AGG - chr7.1:53675-53694 MS.gene025832:intron 40.0%
!! GTGGATTGGAAAAACCATCA+CGG - chr7.1:53491-53510 MS.gene025832:intron 40.0%
!! TACCGATTCATTTAGCTGCT+CGG - chr7.1:52162-52181 MS.gene025832:CDS 40.0%
!! TGTTGGCTGCATTCTTTTGA+TGG - chr7.1:55669-55688 MS.gene025832:intron 40.0%
!!! AGATTTTAGTTGCGCCTCTT+TGG - chr7.1:55086-55105 MS.gene025832:intron 40.0%
!!! CCGAGCAGTTTTAAATCTAG+AGG - chr7.1:52840-52859 MS.gene025832:CDS 40.0%
!!! TGTTCCTGGCTATTTTTGCA+AGG + chr7.1:52645-52664 None:intergenic 40.0%
!!! TGTTTTTCAGGCTGATTGGT+GGG + chr7.1:55760-55779 None:intergenic 40.0%
!!! TTGTTTTTCAGGCTGATTGG+TGG + chr7.1:55761-55780 None:intergenic 40.0%
AAAGTCAGATCCTCTTCTGC+AGG - chr7.1:53352-53371 MS.gene025832:intron 45.0%
AACAGCAACAACAGTAGCAG+AGG + chr7.1:56224-56243 None:intergenic 45.0%
AAGAAGAGCAAGGAATCACC+TGG - chr7.1:52125-52144 MS.gene025832:CDS 45.0%
AAGTGAGAGGAAGAAGAGCA+AGG - chr7.1:52115-52134 MS.gene025832:CDS 45.0%
ACAAAGTCCAGACTTGATGG+AGG + chr7.1:54809-54828 None:intergenic 45.0%
ACATCGTGTTACAGCCAAGT+AGG + chr7.1:54983-55002 None:intergenic 45.0%
ACCATCTACTTGGAGTGGAT+TGG - chr7.1:53477-53496 MS.gene025832:intron 45.0%
AGAAGAGCAAGGAATCACCT+GGG - chr7.1:52126-52145 MS.gene025832:CDS 45.0%
AGAAGGAATGGCAATGGTTG+GGG - chr7.1:53736-53755 MS.gene025832:intron 45.0%
AGATCCTCTTCTGCAGGTTT+AGG - chr7.1:53358-53377 MS.gene025832:intron 45.0%
AGGTCAAACTGCACTACACA+TGG - chr7.1:52768-52787 MS.gene025832:CDS 45.0%
AGTAGGAAGAGGTGAACCTA+AGG + chr7.1:54966-54985 None:intergenic 45.0%
ATCTGTAGTCATGGCCAAGT+TGG + chr7.1:52539-52558 None:intergenic 45.0%
ATGCACAACTGTATGTCCAC+CGG - chr7.1:54018-54037 MS.gene025832:intron 45.0%
ATTTGGAGGTTTCCCTTGGT+CGG + chr7.1:56053-56072 None:intergenic 45.0%
CAACCAAAAAGACCACCCTT+AGG - chr7.1:54947-54966 MS.gene025832:intron 45.0%
CAAGACAAGGGGTTCAGTAT+GGG + chr7.1:55784-55803 None:intergenic 45.0%
CACTACACATGGCTGTGAAA+GGG - chr7.1:52779-52798 MS.gene025832:CDS 45.0%
CAGAAGAGGATCTGACTTTC+AGG + chr7.1:53351-53370 None:intergenic 45.0%
CAGACAAAGTCCAGACTTGA+TGG + chr7.1:54812-54831 None:intergenic 45.0%
CAGAGGTAATCGCATTGTTC+AGG + chr7.1:56207-56226 None:intergenic 45.0%
CAGCTGAGATTTACCATGAC+AGG + chr7.1:54843-54862 None:intergenic 45.0%
CATGGAGAAAGAACGGCTTT+CGG + chr7.1:56671-56690 None:intergenic 45.0%
CATTAACAAGCTCATGTGGC+TGG - chr7.1:56471-56490 MS.gene025832:CDS 45.0%
CATTGTTCAGGCCACTTATG+TGG + chr7.1:56195-56214 None:intergenic 45.0%
CTGAGATTTACCATGACAGG+AGG + chr7.1:54840-54859 None:intergenic 45.0%
CTGTTAATTCCACCGACCAA+GGG - chr7.1:56038-56057 MS.gene025832:CDS 45.0%
CTTATGTTTCGTGCACAGCT+CGG + chr7.1:54068-54087 None:intergenic 45.0%
GAAATTAGCATTTGGGCTCG+GGG + chr7.1:53853-53872 None:intergenic 45.0%
GAAGAAGGAATGGCAATGGT+TGG - chr7.1:53734-53753 MS.gene025832:intron 45.0%
GACAGTCTTACCATTGTTCC+TGG + chr7.1:52659-52678 None:intergenic 45.0%
GAGCGAAGAAGAGAGATAAG+GGG + chr7.1:53935-53954 None:intergenic 45.0%
GCTTCTATTGTCGCCAGAAA+TGG - chr7.1:52353-52372 MS.gene025832:CDS 45.0%
GCTTGGATCCTTGCTTAGTA+AGG + chr7.1:52725-52744 None:intergenic 45.0%
GGCACATCACCATTTATCTC+TGG - chr7.1:55148-55167 MS.gene025832:intron 45.0%
GGGTAAGTGGTAACCGTAAA+AGG + chr7.1:53883-53902 None:intergenic 45.0%
GGTCATCATGCTTCAAGCTA+TGG + chr7.1:54047-54066 None:intergenic 45.0%
GTAGGAAGAGGTGAACCTAA+GGG + chr7.1:54965-54984 None:intergenic 45.0%
TAAGACTGTCCTTCACTCTG+CGG - chr7.1:52669-52688 MS.gene025832:CDS 45.0%
TAGGTTCACCTCTTCCTACT+TGG - chr7.1:54966-54985 MS.gene025832:intron 45.0%
TATATAGGGGGAAGGGTAAG+TGG + chr7.1:53896-53915 None:intergenic 45.0%
TCAAAACCATGAGGCAGCAA+AGG - chr7.1:52220-52239 MS.gene025832:CDS 45.0%
TCCAATCCACTCCAAGTAGA+TGG + chr7.1:53481-53500 None:intergenic 45.0%
TCTCAGAAGCGACGTAAAGA+GGG + chr7.1:52280-52299 None:intergenic 45.0%
TCTCTCACTTACGTGGTAGT+GGG - chr7.1:56523-56542 MS.gene025832:CDS 45.0%
TCTGTAGTCATGGCCAAGTT+GGG + chr7.1:52538-52557 None:intergenic 45.0%
TGCTTTGCAGCAACATGGAA+GGG + chr7.1:52386-52405 None:intergenic 45.0%
TGTTACAGCCAAGTAGGAAG+AGG + chr7.1:54977-54996 None:intergenic 45.0%
TTAGTCGTGGACCATCTACT+TGG - chr7.1:53467-53486 MS.gene025832:intron 45.0%
TTCCATGTTGCTGCAAAGCA+GGG - chr7.1:52386-52405 MS.gene025832:CDS 45.0%
TTCTCAGAAGCGACGTAAAG+AGG + chr7.1:52281-52300 None:intergenic 45.0%
TTCTCTCACTTACGTGGTAG+TGG - chr7.1:56522-56541 MS.gene025832:CDS 45.0%
! ACCGATTCATTTAGCTGCTC+GGG - chr7.1:52163-52182 MS.gene025832:CDS 45.0%
! AGTGCACACAATTTAGGGTG+AGG - chr7.1:54246-54265 MS.gene025832:intron 45.0%
! AGTTGCTTTGCTGCATTTGG+AGG + chr7.1:56067-56086 None:intergenic 45.0%
! CTTTACGTCGCTTCTGAGAA+CGG - chr7.1:52281-52300 MS.gene025832:CDS 45.0%
! GAACCTAAGGGTGGTCTTTT+TGG + chr7.1:54953-54972 None:intergenic 45.0%
! GAGAAGTTTTCGCGTTGTCA+TGG - chr7.1:52070-52089 MS.gene025832:CDS 45.0%
! GTCGGCTTTCTCTCAGAATA+GGG + chr7.1:53810-53829 None:intergenic 45.0%
! TGACGTCGTGAATCTCCTTT+TGG - chr7.1:52606-52625 MS.gene025832:CDS 45.0%
! TTTAGGGTGAGGACGACAAT+CGG - chr7.1:54257-54276 MS.gene025832:intron 45.0%
!! AGGATCTGACTTTCAGGTTC+GGG + chr7.1:53345-53364 None:intergenic 45.0%
!! GAGGATCTGACTTTCAGGTT+CGG + chr7.1:53346-53365 None:intergenic 45.0%
!! TACCCTCCGTTGATAACAAG+CGG + chr7.1:55919-55938 None:intergenic 45.0%
!!! CGGGTTGCTTTTTGTTATCC+TGG - chr7.1:54277-54296 MS.gene025832:intron 45.0%
!!! GGGTTGTTTTTCAGGCTGAT+TGG + chr7.1:55764-55783 None:intergenic 45.0%
!!! GTTTTTCAGGCTGATTGGTG+GGG + chr7.1:55759-55778 None:intergenic 45.0%
AAGGAATCACCTGGGAAACG+TGG - chr7.1:52134-52153 MS.gene025832:CDS 50.0%
ACAAGTCCTTTGCTGCCTCA+TGG + chr7.1:52229-52248 None:intergenic 50.0%
ACTTCAGCCTCCATCAAGTC+TGG - chr7.1:54799-54818 MS.gene025832:intron 50.0%
AGCCTGTCTTCAGATAGCCT+TGG + chr7.1:54193-54212 None:intergenic 50.0%
ATGCTTCAAGCTATGGACCC+CGG + chr7.1:54040-54059 None:intergenic 50.0%
ATTCATTTAGCTGCTCGGGC+TGG - chr7.1:52167-52186 MS.gene025832:CDS 50.0%
CAATAGTCGAGGATGGTGAC+TGG + chr7.1:54921-54940 None:intergenic 50.0%
CACGACGTCAATGTGACCTT+GGG + chr7.1:52596-52615 None:intergenic 50.0%
CATGCCTAAACCTGCAGAAG+AGG + chr7.1:53365-53384 None:intergenic 50.0%
CATGTCGCATACATCAGACC+AGG - chr7.1:56687-56706 MS.gene025832:CDS 50.0%
CATTTCTTTGGCTGTCGTGG+TGG - chr7.1:56393-56412 MS.gene025832:CDS 50.0%
CGAGGATGGTGACTGGAAAA+CGG + chr7.1:54914-54933 None:intergenic 50.0%
CGCTGCCAATAGTACCAACA+CGG + chr7.1:53610-53629 None:intergenic 50.0%
CTAAGCAAGGATCCAAGCAC+CGG - chr7.1:52727-52746 MS.gene025832:CDS 50.0%
CTATTGGCAGCGCCTATGAT+AGG - chr7.1:53618-53637 MS.gene025832:intron 50.0%
CTCAGAAGCGACGTAAAGAG+GGG + chr7.1:52279-52298 None:intergenic 50.0%
CTCCAAGGCTATCTGAAGAC+AGG - chr7.1:54188-54207 MS.gene025832:intron 50.0%
CTGCATTTGGAGGTTTCCCT+TGG + chr7.1:56057-56076 None:intergenic 50.0%
CTGCTTTGCAGCAACATGGA+AGG + chr7.1:52387-52406 None:intergenic 50.0%
CTGGTCTGATGTATGCGACA+TGG + chr7.1:56689-56708 None:intergenic 50.0%
CTTCACTCTGCGGCTAGAAT+GGG - chr7.1:52679-52698 MS.gene025832:CDS 50.0%
CTTCCATGTTGCTGCAAAGC+AGG - chr7.1:52385-52404 MS.gene025832:CDS 50.0%
GAAGGAATGGCAATGGTTGG+GGG - chr7.1:53737-53756 MS.gene025832:intron 50.0%
GAATAACAAAGAGGGAGGGG+AGG + chr7.1:53975-53994 None:intergenic 50.0%
GCAAGACAAGGGGTTCAGTA+TGG + chr7.1:55785-55804 None:intergenic 50.0%
GCACTACACATGGCTGTGAA+AGG - chr7.1:52778-52797 MS.gene025832:CDS 50.0%
GCCCGAGCAGCTAAATGAAT+CGG + chr7.1:52167-52186 None:intergenic 50.0%
GCTGTTAATTCCACCGACCA+AGG - chr7.1:56037-56056 MS.gene025832:CDS 50.0%
GGGGTAAGCACCTTACATGA+TGG - chr7.1:53756-53775 MS.gene025832:intron 50.0%
GTCTGAATCTCCTCCTGTCA+TGG - chr7.1:54827-54846 MS.gene025832:intron 50.0%
TAACAACTAAGCACACCCGG+CGG + chr7.1:53564-53583 None:intergenic 50.0%
TAATGTCTTCGGCTCCGTGT+TGG - chr7.1:53593-53612 MS.gene025832:intron 50.0%
TAGTGGGATCACACTCACGA+TGG - chr7.1:56539-56558 MS.gene025832:CDS 50.0%
TCACGACGTCAATGTGACCT+TGG + chr7.1:52597-52616 None:intergenic 50.0%
TCAGTCCTAAATCCGGTGCT+TGG + chr7.1:52742-52761 None:intergenic 50.0%
TGAGCTTCATGGGAAGTGAG+AGG - chr7.1:52102-52121 MS.gene025832:CDS 50.0%
TGAGGCAGCAAAGGACTTGT+TGG - chr7.1:52229-52248 MS.gene025832:CDS 50.0%
TGCAAAGAAGGGCCGTAATC+AGG - chr7.1:52894-52913 MS.gene025832:intron 50.0%
TGCACAACTGTATGTCCACC+GGG - chr7.1:54019-54038 MS.gene025832:intron 50.0%
TTACACACAGCTGCTACCCA+AGG - chr7.1:52577-52596 MS.gene025832:CDS 50.0%
TTAGGGTGAGGACGACAATC+GGG - chr7.1:54258-54277 MS.gene025832:intron 50.0%
TTCACTCTGCGGCTAGAATG+GGG - chr7.1:52680-52699 MS.gene025832:CDS 50.0%
TTCATTTAGCTGCTCGGGCT+GGG - chr7.1:52168-52187 MS.gene025832:CDS 50.0%
TTGGCAAAGCAGAACCTCGA+GGG - chr7.1:52248-52267 MS.gene025832:CDS 50.0%
! CTTCAGATAGCCTTGGAGCA+GGG + chr7.1:54186-54205 None:intergenic 50.0%
! GCTGCACTCTTTTCCCAACT+TGG - chr7.1:52522-52541 MS.gene025832:CDS 50.0%
! GGTCGGCTTTCTCTCAGAAT+AGG + chr7.1:53811-53830 None:intergenic 50.0%
! GTTTTCGCGTTGTCATGGAG+AGG - chr7.1:52075-52094 MS.gene025832:CDS 50.0%
! TCTTCAGATAGCCTTGGAGC+AGG + chr7.1:54187-54206 None:intergenic 50.0%
!! AGGATCCAAGCACCGGATTT+AGG - chr7.1:52734-52753 MS.gene025832:CDS 50.0%
!! TGTCCGCCGCTTGTTATCAA+CGG - chr7.1:55910-55929 MS.gene025832:CDS 50.0%
ACTCCAACAGACACGCCAGA+CGG - chr7.1:56129-56148 MS.gene025832:CDS 55.0%
AGCATTTGGGCTCGGGGTAT+TGG + chr7.1:53847-53866 None:intergenic 55.0%
CCATTCTAGCCGCAGAGTGA+AGG + chr7.1:52681-52700 None:intergenic 55.0%
CCTTCACTCTGCGGCTAGAA+TGG - chr7.1:52678-52697 MS.gene025832:CDS 55.0%
CGTGGACCATCTACTTGGAG+TGG - chr7.1:53472-53491 MS.gene025832:intron 55.0%
CTGGCGTGTCTGTTGGAGTT+GGG + chr7.1:56128-56147 None:intergenic 55.0%
GACCCTGCTTTGCAGCAACA+TGG + chr7.1:52391-52410 None:intergenic 55.0%
GAGAGGCAGCTGAGCTTCAT+GGG - chr7.1:52092-52111 MS.gene025832:CDS 55.0%
GCACAACTGTATGTCCACCG+GGG - chr7.1:54020-54039 MS.gene025832:intron 55.0%
GCTCACGAGCAGTTCCAAAG+AGG + chr7.1:55103-55122 None:intergenic 55.0%
GCTGCAAAGCAGGGTCATCT+TGG - chr7.1:52395-52414 MS.gene025832:CDS 55.0%
GGAAGAGGTGAACCTAAGGG+TGG + chr7.1:54962-54981 None:intergenic 55.0%
GTTGGCAAAGCAGAACCTCG+AGG - chr7.1:52247-52266 MS.gene025832:CDS 55.0%
TCTGGCGTGTCTGTTGGAGT+TGG + chr7.1:56129-56148 None:intergenic 55.0%
TGGCAAAGCAGAACCTCGAG+GGG - chr7.1:52249-52268 MS.gene025832:CDS 55.0%
TTGACCGGGGACAGTGAAGA+TGG + chr7.1:56272-56291 None:intergenic 55.0%
! CGGCTCCGTGTTGGTACTAT+TGG - chr7.1:53602-53621 MS.gene025832:intron 55.0%
! TGCGGCTAGAATGGGGCATT+TGG - chr7.1:52687-52706 MS.gene025832:CDS 55.0%
! TTGTTTGTTGCCTGTGCCGC+CGG - chr7.1:53545-53564 MS.gene025832:intron 55.0%
!! CCTCCGTTGATAACAAGCGG+CGG + chr7.1:55916-55935 None:intergenic 55.0%
!! CGCCGCTTGTTATCAACGGA+GGG - chr7.1:55914-55933 MS.gene025832:CDS 55.0%
!! GGTATTGGCTCTGAGAAGCG+AGG + chr7.1:53832-53851 None:intergenic 55.0%
!! TTGGCTCTGAGAAGCGAGGT+CGG + chr7.1:53828-53847 None:intergenic 55.0%
ACAAAGAGGGAGGGGAGGAG+AGG + chr7.1:53970-53989 None:intergenic 60.0%
AGGGGAGGAGAGGAACGTGT+GGG + chr7.1:53960-53979 None:intergenic 60.0%
CTCCAACAGACACGCCAGAC+GGG - chr7.1:56130-56149 MS.gene025832:CDS 60.0%
CTTCAAGCTATGGACCCCGG+TGG + chr7.1:54037-54056 None:intergenic 60.0%
GCAGCCATCTTCACTGTCCC+CGG - chr7.1:56265-56284 MS.gene025832:intron 60.0%
GGAGAGGCAGCTGAGCTTCA+TGG - chr7.1:52091-52110 MS.gene025832:CDS 60.0%
GGCAAAGCAGAACCTCGAGG+GGG - chr7.1:52250-52269 MS.gene025832:CDS 60.0%
GGTAAGTCGCCACGTTTCCC+AGG + chr7.1:52146-52165 None:intergenic 60.0%
TGGAGGTTTCCCTTGGTCGG+TGG + chr7.1:56050-56069 None:intergenic 60.0%
! TGTTTGTTGCCTGTGCCGCC+GGG - chr7.1:53546-53565 MS.gene025832:intron 60.0%
!! CCGCCGCTTGTTATCAACGG+AGG - chr7.1:55913-55932 MS.gene025832:CDS 60.0%
AAAGAGGGGTCTCCCCCTCG+AGG + chr7.1:52265-52284 None:intergenic 65.0%
AGACACGCCAGACGGGCATG+AGG - chr7.1:56137-56156 MS.gene025832:CDS 65.0%
GACACGCCAGACGGGCATGA+GGG - chr7.1:56138-56157 MS.gene025832:CDS 65.0%
GAGGGGAGGAGAGGAACGTG+TGG + chr7.1:53961-53980 None:intergenic 65.0%
TCTGGACCCTCATGCCCGTC+TGG + chr7.1:56147-56166 None:intergenic 65.0%
TGCCCGTCTGGCGTGTCTGT+TGG + chr7.1:56135-56154 None:intergenic 65.0%
CTAAGCACACCCGGCGGCAC+AGG + chr7.1:53558-53577 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 52029 56750 52029 ID=MS.gene025832
chr7.1 mRNA 52029 56750 52029 ID=MS.gene025832.t1;Parent=MS.gene025832
chr7.1 exon 56363 56750 56363 ID=MS.gene025832.t1.exon1;Parent=MS.gene025832.t1
chr7.1 CDS 56363 56750 56363 ID=cds.MS.gene025832.t1;Parent=MS.gene025832.t1
chr7.1 exon 55864 56273 55864 ID=MS.gene025832.t1.exon2;Parent=MS.gene025832.t1
chr7.1 CDS 55864 56273 55864 ID=cds.MS.gene025832.t1;Parent=MS.gene025832.t1
chr7.1 exon 52029 52871 52029 ID=MS.gene025832.t1.exon3;Parent=MS.gene025832.t1
chr7.1 CDS 52029 52871 52029 ID=cds.MS.gene025832.t1;Parent=MS.gene025832.t1
Gene Sequence

>MS.gene025832

ATGGAAAAACAGAAGAGTTTTCGTGGATTCATGGAGAAACAGAGAAGTTTTCGCGTTGTCATGGAGAGGCAGCTGAGCTTCATGGGAAGTGAGAGGAAGAAGAGCAAGGAATCACCTGGGAAACGTGGCGACTTACCGATTCATTTAGCTGCTCGGGCTGGGAACTTGACTAGAGTCAAAGAGATACTACTTCAAAACCATGAGGCAGCAAAGGACTTGTTGGCAAAGCAGAACCTCGAGGGGGAGACCCCTCTTTACGTCGCTTCTGAGAACGGACATGATTTGGTTGTTAGCGAGATACTCAAATACTTGGACTTGCAAACTGCTTCTATTGTCGCCAGAAATGGTTATGATCCCTTCCATGTTGCTGCAAAGCAGGGTCATCTTGGTAAGTAAGTTTCAGATCATGTTTGTGTTCTTTTCACAAATGTACCATGTCTCACTATAACTCTGACCGAGAAAAAAAGAATCTTGCAGAGGTGCTGAGAGAACTGCTGCACTCTTTTCCCAACTTGGCCATGACTACAGATTTGTCCAATTCAACTGCTTTACACACAGCTGCTACCCAAGGTCACATTGACGTCGTGAATCTCCTTTTGGAATCAGATTCAAACCTTGCAAAAATAGCCAGGAACAATGGTAAGACTGTCCTTCACTCTGCGGCTAGAATGGGGCATTTGGAAGTTGTGAAAGCCTTACTAAGCAAGGATCCAAGCACCGGATTTAGGACTGATAAGAAAGGTCAAACTGCACTACACATGGCTGTGAAAGGGCAAAATGAAGAAATTTTGCTGGAATTGGTGAAACCTGACCGAGCAGTTTTAAATCTAGAGGATAATAAAGGAAATACAGCATTGCATATTGCTGCAAAGAAGGGCCGTAATCAGGTGTTTGCTTTTACTTTTATAATTATTATTCATTGTATATAAAACTTATTTTCTTATCAGCCTTTATAAACTAATTATTGAGATATTCTTTATTTTTGTTTAGCGACGAACATGCATCCATGTCTAATACTTGTTCTTATGATTCAAAGTTGACAGAAAAAGATTCACACAAAAATAACCACGTAATCCTAAAATATAAGCATAACTGTAAGTCATATTATGGCTTGTTTGCACACTGGTAGTTTACAATGTAGAAAAGATGGTGGAGTGACAGATAAATAGACACATACCTAGTAGAAAATGAACGAGAAGCAGAGAATTAAATAACCACCCAATGATCAATTGTAGGTGAACATGAATGGCTTTTCAATTGCTGGTTTCACAAAATTAAATAACCACCCAATGATCAATGGGTTTTTTAGATTTCCCGAACCTGAAAGTCAGATCCTCTTCTGCAGGTTTAGGCATGTCCCATGTAAGAAACCCATAATTTCCTTTGCCATCTGGAATCAATAGAACAATTTGGGACCATCATGTGCAGTATTTTCTATTTAGTCGTGGACCATCTACTTGGAGTGGATTGGAAAAACCATCACGGTTATTGAAAAAACCATGGGAGTTATTTGAGCTTGTTTGTTGCCTGTGCCGCCGGGTGTGCTTAGTTGTTATGTCTATAATAATGTCTTCGGCTCCGTGTTGGTACTATTGGCAGCGCCTATGATAGGAACCCCATTAGATAGAAATCAGACTGATATTAAAGGATTAAGAAGTGCTTGTACAGGGATTTCACTTTAACAAGCGGAAGAAACAACTATATAGAAGAAGGAATGGCAATGGTTGGGGGTAAGCACCTTACATGATGGATAGAGTAAAATACTGAAGCAAGACATTCCCTATTCTGAGAGAAAGCCGACCTCGCTTCTCAGAGCCAATACCCCGAGCCCAAATGCTAATTTCTCACATGCCTTTTACGGTTACCACTTACCCTTCCCCCTATATATTTCTCTTATGTTATTCCCCTTATCTCTCTTCTTCGCTCATCCCACACGTTCCTCTCCTCCCCTCCCTCTTTGTTATTCATTTTGTTCTCAAGTTAAAAGAAATGCACAACTGTATGTCCACCGGGGTCCATAGCTTGAAGCATGATGACCGAGCTGTGCACGAAACATAAGAATTTTAACTTGGGTTGAATTATCTGTCCTTGGGGTTATTTTCAACTAAAAAATATATTGTTTTCTTCTCCATTATTGCTATATGAAAATATAGTCCCTGCTCCAAGGCTATCTGAAGACAGGCTGAATGTTATTTAATTTTGCAAAGAGATACCAAAAGTGCACACAATTTAGGGTGAGGACGACAATCGGGTTGCTTTTTGTTATCCTGGTATCTCGATTAGCATGATGTTACTTGTGATGCTTCAGTTGTGCTCAATTTTAGCTACGTCAGTAAAAACTACTTGCCTATGGAAGTATGTGCATACTAAGAGTAGAAGAGCATCTCACTGAAAATTGTGCTGTTTGAAAATAGAACTTAGTTTGATCTATGAAGTAGTGCCACAAAATGTGCATGAATACGAACACAGAGACAAGGACAAACTCAATACAGGACATTGACACACACACAGATATATATATATATATATATATATATATATATATATATCGTAGGAAATTGAATAATTACATTATAATTCGTTTTATCTTAGGAAATTGTGTCTGCTTAGTTACTCATCGTATAAATTGCATTCATATTTATTTTGGTGTGTGTGATTTTACTGAGTATATTTATTCACAAAAACGTACTTTAAAGCTACTCTTCTCATTTCATTTTTTCACTTTTAAGTTGGTATTAGAGCAGAGTTTGATCATTCACTTCTATTGTGTACTTCAGCCTCCATCAAGTCTGGACTTTGTCTGAATCTCCTCCTGTCATGGTAAATCTCAGCTGTATCTTCTTTCTGGCCATTGTTAATATACTTTTTTGGTAATTGTCAGTCCGTTTTCCAGTCACCATCCTCGACTATTGAATTTTCAACCAAAAAGACCACCCTTAGGTTCACCTCTTCCTACTTGGCTGTAACACGATGTTTGATCAGTTGAAAGCGTGTCTCACCACAATAGTTTTCTACTTCGTTAGCTACGTGAAAGTCACACATTACCGGCCTGTCTTCAGATTTTAGTTGCGCCTCTTTGGAACTGCTCGTGAGCCTCTCCTAAGTCTTTTTTTTTTTTTGGCACATCACCATTTATCTCTGGTTTGAGTAGTAGGTATAAGTTCCTTGGATGCCATCACTTTTTTTGTTCATGTAGCTTGCTGTTTCAGTCTATTTTCTTTCTTATGGCATTAATTGGTTAAGAGTAATAAAAGCTCCGATCTTATTTGGTTTCTCTAGAGAGCCATCAATTCCCATGAAAAACATTAATGAATCCTTAATCGGTATTCTTTTGAAGTTTGATTTCTTGGTTAAGGACCATATGAATTATGATAATTTGATAACCTAAGTTGAAAATAGTGATGCTTCATGTGAACGTGAAAAAGTTGATTATTAGTTAGTATCCTCCTTACTTTGGCAATGTATTTCCACATCATTTTTTGTTCTTTTAATTAACCAGGTCTGTTTCTCTCTTATTAGCTTTGTACAGTCTGGTTTGTTTTGGTTCTGCAGTACCAAATCTGAACTCTGAATTTGTGAGAGGGATACTCACCTCCTGCAGATTATTTCTCCTTTGCTTACTTATTAATTCATTATTTATTGTTGGCTGCATTCTTTTGATGGCACACATTTAAATGATAGTTGACTGTTAACATGAAAAATACTGTAGCTTCAGTAAATTAAGAATCCCCACCAATCAGCCTGAAAAACAACCCATACTGAACCCCTTGTCTTGCATTGTGATTTTTATTTTTTTTAGAAAGATAAAGTTGATACCAAGATAGTGGAGAGTAATTTTGCTTTCAATATTTATTCTGAAGTGGTCATTATTAACAACAGAATGTCCGCCGCTTGTTATCAACGGAGGGTATTAACATCAATGCTACTAATAAGGCGGGAGAGACTCCCCTTGACATTGCAGAAAAATTTGGTAGTCCAGATCTTGTCTCCATAATGAGGGATGCTGGGGCTGTTAATTCCACCGACCAAGGGAAACCTCCAAATGCAGCAAAGCAACTAAAGCAGACTGTCAGCGACATAAAGCATGATGTGCAATCCCAACTCCAACAGACACGCCAGACGGGCATGAGGGTCCAGAAAATCGCTAAGAAGCTGAAGAAACTCCACATAAGTGGCCTGAACAATGCGATTACCTCTGCTACTGTTGTTGCTGTTCTCATTGCTACAGTTGCTTTTGCAGCCATCTTCACTGTCCCCGGTCAATATGTTGAAGAGAAAGTAAATGGCTTTTCACTTGGACAAGCAACTATAGCGAACAATCCAGCTTTCCTGATATTTTTTGTGTTTGATAGCCTGGCATTATTCATTTCTTTGGCTGTCGTGGTGGTTCAAACTTCAGTTGTTGTGATTGAGCAAAAGGCAAAGAAGCAGCTTGTTTTTGTCATTAACAAGCTCATGTGGCTGGCTTGCCTTTTCATTTCCATTGCCTTCATTTCTCTCACTTACGTGGTAGTGGGATCACACTCACGATGGCTTGCTATATATGCTACAGTGATTGGAAGCTTGATAATGCTCTCTACAATCGGTTCCATGTGCTATTGTGTCATTCTGCATAGGATAGATGAGACAAAATTGAGGGCCGAAAGCCGTTCTTTCTCCATGTCGCATACATCAGACCAGGAGATTTTGAACGGTGAATACAAGAGGATGTACGCACTTTAG

Protein sequence

>MS.gene025832.t1

MEKQKSFRGFMEKQRSFRVVMERQLSFMGSERKKSKESPGKRGDLPIHLAARAGNLTRVKEILLQNHEAAKDLLAKQNLEGETPLYVASENGHDLVVSEILKYLDLQTASIVARNGYDPFHVAAKQGHLEVLRELLHSFPNLAMTTDLSNSTALHTAATQGHIDVVNLLLESDSNLAKIARNNGKTVLHSAARMGHLEVVKALLSKDPSTGFRTDKKGQTALHMAVKGQNEEILLELVKPDRAVLNLEDNKGNTALHIAAKKGRNQNVRRLLSTEGININATNKAGETPLDIAEKFGSPDLVSIMRDAGAVNSTDQGKPPNAAKQLKQTVSDIKHDVQSQLQQTRQTGMRVQKIAKKLKKLHISGLNNAITSATVVAVLIATVAFAAIFTVPGQYVEEKVNGFSLGQATIANNPAFLIFFVFDSLALFISLAVVVVQTSVVVIEQKAKKQLVFVINKLMWLACLFISIAFISLTYVVVGSHSRWLAIYATVIGSLIMLSTIGSMCYCVILHRIDETKLRAESRSFSMSHTSDQEILNGEYKRMYAL