Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74676.t1 | XP_013451665.1 | 99.4 | 340 | 2 | 0 | 2 | 341 | 75 | 414 | 7.40E-193 | 682.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74676.t1 | O82030 | 84.5 | 336 | 52 | 0 | 2 | 337 | 74 | 409 | 1.9e-168 | 593.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74676.t1 | A0A072U7F9 | 99.4 | 340 | 2 | 0 | 2 | 341 | 45 | 384 | 5.3e-193 | 682.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene74676 | MS.gene063343 | PPI |
| MS.gene74676 | MS.gene75024 | PPI |
| MS.gene74676 | MS.gene030337 | PPI |
| MS.gene74676 | MS.gene047966 | PPI |
| MS.gene74676 | MS.gene00843 | PPI |
| MS.gene74676 | MS.gene05967 | PPI |
| MS.gene01884 | MS.gene74676 | PPI |
| MS.gene20137 | MS.gene74676 | PPI |
| MS.gene74676 | MS.gene002926 | PPI |
| MS.gene74676 | MS.gene66388 | PPI |
| MS.gene74676 | MS.gene049051 | PPI |
| MS.gene049052 | MS.gene74676 | PPI |
| MS.gene74676 | MS.gene015841 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74676.t1 | MTR_6g033540 | 99.120 | 341 | 3 | 0 | 1 | 341 | 74 | 414 | 0.0 | 692 |
| MS.gene74676.t1 | MTR_6g033540 | 99.120 | 341 | 3 | 0 | 1 | 341 | 44 | 384 | 0.0 | 690 |
| MS.gene74676.t1 | MTR_6g033600 | 94.656 | 262 | 13 | 1 | 74 | 335 | 53 | 313 | 0.0 | 503 |
| MS.gene74676.t1 | MTR_3g072670 | 25.743 | 303 | 186 | 13 | 58 | 330 | 138 | 431 | 2.60e-14 | 73.9 |
| MS.gene74676.t1 | MTR_3g072680 | 23.793 | 290 | 187 | 11 | 67 | 330 | 107 | 388 | 7.17e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74676.t1 | AT5G10330 | 82.353 | 340 | 60 | 0 | 1 | 340 | 77 | 416 | 0.0 | 588 |
| MS.gene74676.t1 | AT5G10330 | 82.353 | 340 | 60 | 0 | 1 | 340 | 77 | 416 | 0.0 | 588 |
| MS.gene74676.t1 | AT1G71920 | 82.353 | 340 | 60 | 0 | 1 | 340 | 77 | 416 | 0.0 | 588 |
| MS.gene74676.t1 | AT1G71920 | 82.353 | 340 | 60 | 0 | 1 | 340 | 77 | 416 | 0.0 | 588 |
| MS.gene74676.t1 | AT5G10330 | 82.353 | 340 | 60 | 0 | 1 | 340 | 22 | 361 | 0.0 | 586 |
| MS.gene74676.t1 | AT5G10330 | 82.353 | 340 | 60 | 0 | 1 | 340 | 22 | 361 | 0.0 | 586 |
| MS.gene74676.t1 | AT1G71920 | 82.353 | 340 | 60 | 0 | 1 | 340 | 22 | 361 | 0.0 | 586 |
| MS.gene74676.t1 | AT1G71920 | 81.471 | 340 | 61 | 1 | 1 | 340 | 77 | 414 | 0.0 | 579 |
| MS.gene74676.t1 | AT5G10330 | 82.178 | 303 | 54 | 0 | 38 | 340 | 1 | 303 | 0.0 | 523 |
| MS.gene74676.t1 | AT5G10330 | 82.178 | 303 | 54 | 0 | 38 | 340 | 1 | 303 | 0.0 | 523 |
| MS.gene74676.t1 | AT5G10330 | 82.178 | 303 | 54 | 0 | 38 | 340 | 1 | 303 | 0.0 | 523 |
| MS.gene74676.t1 | AT5G10330 | 82.178 | 303 | 54 | 0 | 38 | 340 | 1 | 303 | 0.0 | 523 |
| MS.gene74676.t1 | AT1G71920 | 82.178 | 303 | 54 | 0 | 38 | 340 | 1 | 303 | 0.0 | 523 |
| MS.gene74676.t1 | AT1G71920 | 82.178 | 303 | 54 | 0 | 38 | 340 | 1 | 303 | 0.0 | 523 |
Find 87 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATGTACCTTTAGCTTCTT+TGG | 0.194832 | 6.3:-23243510 | None:intergenic |
| GAATTTGACGCTGCAGTTAA+TGG | 0.265110 | 6.3:+23239258 | MS.gene74676:CDS |
| TGAGTATAATCAAATATCTT+TGG | 0.283120 | 6.3:+23242932 | MS.gene74676:CDS |
| GCCGGACTTCGAGTGGGATA+TGG | 0.283282 | 6.3:+23242898 | MS.gene74676:CDS |
| GCAGCTCTCGCCCAAGATTC+AGG | 0.305014 | 6.3:+23238994 | MS.gene74676:CDS |
| TACCTCCCATCTGGATTGTT+TGG | 0.305845 | 6.3:-23239525 | None:intergenic |
| TTCATCCAGCACCACCAGTA+TGG | 0.313584 | 6.3:-23241954 | None:intergenic |
| GAATCTGAATATATTCTTGT+AGG | 0.316423 | 6.3:+23239021 | MS.gene74676:CDS |
| GATGCTAATGAAAATCCTTA+TGG | 0.324493 | 6.3:+23238261 | MS.gene74676:CDS |
| TCCACGTTCAAGCTGAAATC+TGG | 0.326703 | 6.3:-23239447 | None:intergenic |
| GCACGCAATCGGCGGCTCTC+TGG | 0.338634 | 6.3:-23238973 | None:intergenic |
| CAGATTCAAGGCCTGAATCT+TGG | 0.339126 | 6.3:-23239005 | None:intergenic |
| GCAGCAACAGATACATTATA+CGG | 0.348600 | 6.3:-23242967 | None:intergenic |
| ACAGGAAGACCTAGCAGAAA+TGG | 0.371399 | 6.3:+23244226 | MS.gene74676:intron |
| GATACTTGAGCTTCCCATAC+TGG | 0.393982 | 6.3:+23241940 | MS.gene74676:CDS |
| GGGCGAGAGCTGCACGCAAT+CGG | 0.396607 | 6.3:-23238984 | None:intergenic |
| ATTCTTTGCGAGGTTACATC+TGG | 0.399565 | 6.3:+23243480 | MS.gene74676:CDS |
| CAAGAATATATTCAGATTCA+AGG | 0.402850 | 6.3:-23239017 | None:intergenic |
| AATGGCTTGGAAATGGCTTA+AGG | 0.404237 | 6.3:-23243449 | None:intergenic |
| AAATTAGAATGGCTTGGAAA+TGG | 0.411601 | 6.3:-23243456 | None:intergenic |
| TCTGGATCCGGATAGACATA+TGG | 0.414258 | 6.3:-23238955 | None:intergenic |
| AAGCTGAAATCTGGCCTCCT+TGG | 0.422105 | 6.3:-23239438 | None:intergenic |
| ACAGAATGTCAAAGATGCTT+TGG | 0.430908 | 6.3:+23243380 | MS.gene74676:intron |
| AGATTCAAGGCCTGAATCTT+GGG | 0.434045 | 6.3:-23239004 | None:intergenic |
| TACAGTTGTGTTCTTGATCC+CGG | 0.436182 | 6.3:+23239195 | MS.gene74676:intron |
| AATCGGCGGCTCTCTGGATC+CGG | 0.439573 | 6.3:-23238967 | None:intergenic |
| AATTCATACATTGTGAAAGT+TGG | 0.444877 | 6.3:-23239240 | None:intergenic |
| CTAGATAGTTACCTCCCATC+TGG | 0.450643 | 6.3:-23239534 | None:intergenic |
| TCCATATCCCACTCGAAGTC+CGG | 0.459541 | 6.3:-23242899 | None:intergenic |
| ATAAGCACATCTGTGTGTTC+AGG | 0.460091 | 6.3:-23244314 | None:intergenic |
| ATGACAATCTGATTGTTCTT+CGG | 0.466193 | 6.3:+23242029 | MS.gene74676:CDS |
| CGCAAAGAATGAAATTAGAA+TGG | 0.477198 | 6.3:-23243467 | None:intergenic |
| GCTTCCCATACTGGTGGTGC+TGG | 0.484303 | 6.3:+23241949 | MS.gene74676:CDS |
| ATTAATTTCTCAGGTTTAGC+CGG | 0.486982 | 6.3:+23242880 | MS.gene74676:intron |
| ACGATTCCCATATGTCTATC+CGG | 0.490034 | 6.3:+23238948 | MS.gene74676:CDS |
| CAATTGAATCAAAGATGAGT+TGG | 0.500291 | 6.3:+23241996 | MS.gene74676:CDS |
| CAGGAAGACCTAGCAGAAAT+GGG | 0.503599 | 6.3:+23244227 | MS.gene74676:intron |
| CGAGAGCTGCACGCAATCGG+CGG | 0.506362 | 6.3:-23238981 | None:intergenic |
| TCATACATTGTGAAAGTTGG+AGG | 0.507938 | 6.3:-23239237 | None:intergenic |
| TCAGCTCTTTATTGCTGTAG+TGG | 0.514039 | 6.3:-23244262 | None:intergenic |
| CAGGCTTCCCAACGGATACT+CGG | 0.518648 | 6.3:-23244295 | None:intergenic |
| AATTGAATCAAAGATGAGTT+GGG | 0.520370 | 6.3:+23241997 | MS.gene74676:CDS |
| CTTGGAAATGGCTTAAGGAA+TGG | 0.520893 | 6.3:-23243444 | None:intergenic |
| GGAATGGAACTGCCTTCAAA+AGG | 0.523912 | 6.3:-23243428 | None:intergenic |
| CTGGATCCGGATAGACATAT+GGG | 0.524963 | 6.3:-23238954 | None:intergenic |
| GAACGTGGAACAAATAATAG+AGG | 0.527144 | 6.3:+23239461 | MS.gene74676:CDS |
| ATGGGAATCGTATTGACCCT+AGG | 0.533354 | 6.3:-23238936 | None:intergenic |
| AGGTTTAGCCGGACTTCGAG+TGG | 0.533703 | 6.3:+23242891 | MS.gene74676:intron |
| TGATAGGTCATGGAAGCCCT+AGG | 0.540736 | 6.3:+23238919 | MS.gene74676:intron |
| ATTAAATGGCTCACCTCTGG+AGG | 0.543452 | 6.3:-23238288 | None:intergenic |
| GGCTACGTCCGAGTATCCGT+TGG | 0.543628 | 6.3:+23244287 | MS.gene74676:CDS |
| GATGCTTTGGTGAAAGAAAG+AGG | 0.548361 | 6.3:+23243393 | MS.gene74676:CDS |
| AGAATGAAATTAGAATGGCT+TGG | 0.553255 | 6.3:-23243462 | None:intergenic |
| TCATCCAGCACCACCAGTAT+GGG | 0.555180 | 6.3:-23241953 | None:intergenic |
| AGTTGATCCAAAGAAGCTAA+AGG | 0.557843 | 6.3:+23243503 | MS.gene74676:CDS |
| TTATTTAAACTGTAGTTCCA+AGG | 0.559966 | 6.3:+23239421 | MS.gene74676:intron |
| TTCTAATTTCATTCTTTGCG+AGG | 0.560446 | 6.3:+23243470 | MS.gene74676:CDS |
| AAATGGCTCACCTCTGGAGG+GGG | 0.562961 | 6.3:-23238285 | None:intergenic |
| ACATCTCCAAACAATCCAGA+TGG | 0.563258 | 6.3:+23239519 | MS.gene74676:CDS |
| GCTACGTCCGAGTATCCGTT+GGG | 0.565723 | 6.3:+23244288 | MS.gene74676:CDS |
| ACAGTCGACAATCTTGTCAC+CGG | 0.571106 | 6.3:-23239214 | None:intergenic |
| TTAAATGGCTCACCTCTGGA+GGG | 0.574585 | 6.3:-23238287 | None:intergenic |
| AATGGAGCACTTGTCATCAA+AGG | 0.576124 | 6.3:+23239276 | MS.gene74676:CDS |
| CAGTCGACAATCTTGTCACC+GGG | 0.578075 | 6.3:-23239213 | None:intergenic |
| ATGCTTTGGTGAAAGAAAGA+GGG | 0.578153 | 6.3:+23243394 | MS.gene74676:CDS |
| TGGGAATCGTATTGACCCTA+GGG | 0.582341 | 6.3:-23238935 | None:intergenic |
| GCCAGATTTCAGCTTGAACG+TGG | 0.583579 | 6.3:+23239446 | MS.gene74676:CDS |
| TCTAGCTTGACAATATCCTC+AGG | 0.583798 | 6.3:-23238240 | None:intergenic |
| AGCTTATTGATTTGATCATG+CGG | 0.587401 | 6.3:+23239058 | MS.gene74676:CDS |
| AGATATTTGATTATACTCAA+AGG | 0.589484 | 6.3:-23242928 | None:intergenic |
| TCATCACACCCATTTCTGCT+AGG | 0.591741 | 6.3:-23244235 | None:intergenic |
| GATCAAATCAATAAGCTCAT+CGG | 0.594362 | 6.3:-23239052 | None:intergenic |
| CGGACATTCAGCAAAAGAGC+TGG | 0.598755 | 6.3:+23242049 | MS.gene74676:CDS |
| TAAATGGCTCACCTCTGGAG+GGG | 0.601963 | 6.3:-23238286 | None:intergenic |
| GGTTTAGCCGGACTTCGAGT+GGG | 0.603708 | 6.3:+23242892 | MS.gene74676:intron |
| TTGCATAAGCAAACTATCGT+AGG | 0.606473 | 6.3:+23244340 | MS.gene74676:CDS |
| GCAAAATCCTACCTATCTAG+AGG | 0.607359 | 6.3:+23243014 | MS.gene74676:CDS |
| CATCTCCAAACAATCCAGAT+GGG | 0.627007 | 6.3:+23239520 | MS.gene74676:CDS |
| GATAGGTCATGGAAGCCCTA+GGG | 0.627430 | 6.3:+23238920 | MS.gene74676:intron |
| GAATATATTCTTGTAGGATG+TGG | 0.628826 | 6.3:+23239027 | MS.gene74676:CDS |
| CTTTGGTGAAAGAAAGAGGG+AGG | 0.635099 | 6.3:+23243397 | MS.gene74676:CDS |
| TCGTCTTGGACGCAAGCCTG+AGG | 0.638192 | 6.3:+23238224 | MS.gene74676:CDS |
| TACAGCAATAAAGAGCTGAA+AGG | 0.663054 | 6.3:+23244266 | MS.gene74676:CDS |
| CTCCAAACAATCCAGATGGG+AGG | 0.665608 | 6.3:+23239523 | MS.gene74676:CDS |
| TTTAAACTGTAGTTCCAAGG+AGG | 0.667891 | 6.3:+23239424 | MS.gene74676:intron |
| ACTTGAGCTTCCCATACTGG+TGG | 0.673821 | 6.3:+23241943 | MS.gene74676:CDS |
| TGTGTGTTCAGGCTTCCCAA+CGG | 0.684077 | 6.3:-23244303 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTATGAAAAAAATTAAT+AGG | - | chr6.3:23242094-23242113 | None:intergenic | 10.0% |
| !! | TGCATAAAATTATTAATTTA+TGG | + | chr6.3:23242736-23242755 | MS.gene74676:intron | 10.0% |
| !! | AAATTTAAATCACACAAAAT+CGG | - | chr6.3:23242695-23242714 | None:intergenic | 15.0% |
| !! | AATCATATTTATCATCATAT+TGG | + | chr6.3:23242807-23242826 | MS.gene74676:intron | 15.0% |
| !! | ACAATACATACAAATTATAT+TGG | - | chr6.3:23241175-23241194 | None:intergenic | 15.0% |
| !! | ATCATATTTATCATCATATT+GGG | + | chr6.3:23242808-23242827 | MS.gene74676:intron | 15.0% |
| !! | CATGATAATAACAAATAATA+TGG | + | chr6.3:23242368-23242387 | MS.gene74676:intron | 15.0% |
| !! | GTCTTATATTAGTATAAATA+AGG | - | chr6.3:23240158-23240177 | None:intergenic | 15.0% |
| !! | TAAGATTAGAAATTAATTGT+AGG | + | chr6.3:23242413-23242432 | MS.gene74676:intron | 15.0% |
| !! | TGATCATAATTTATACATAA+TGG | - | chr6.3:23241120-23241139 | None:intergenic | 15.0% |
| !!! | AGATTTTTGAAATTTGATTT+TGG | + | chr6.3:23240086-23240105 | MS.gene74676:intron | 15.0% |
| !!! | CATATTATTTGTTATTATCA+TGG | - | chr6.3:23242370-23242389 | None:intergenic | 15.0% |
| !! | AATATGTGATCAACTATATT+CGG | - | chr6.3:23238723-23238742 | None:intergenic | 20.0% |
| !! | ACACTATTTCATTATTCATA+GGG | + | chr6.3:23241793-23241812 | MS.gene74676:intron | 20.0% |
| !! | AGATATTTGATTATACTCAA+AGG | - | chr6.3:23242931-23242950 | None:intergenic | 20.0% |
| !! | AGATGTTAAAAATATGCATT+TGG | - | chr6.3:23239505-23239524 | None:intergenic | 20.0% |
| !! | AGTTGAAAATCATAAAACAA+AGG | - | chr6.3:23238838-23238857 | None:intergenic | 20.0% |
| !! | ATAGGATAAATAATCACATT+AGG | + | chr6.3:23243646-23243665 | MS.gene74676:intron | 20.0% |
| !! | ATGCTGACAATAATAATTTA+AGG | - | chr6.3:23243236-23243255 | None:intergenic | 20.0% |
| !! | CCTAAATAAATAGGAAAATT+TGG | + | chr6.3:23240185-23240204 | MS.gene74676:intron | 20.0% |
| !! | GATGTTAAAAATATGCATTT+GGG | - | chr6.3:23239504-23239523 | None:intergenic | 20.0% |
| !! | GATTTATTATTTGTTTGAGA+AGG | - | chr6.3:23240525-23240544 | None:intergenic | 20.0% |
| !! | GTTGAAAATCATAAAACAAA+GGG | - | chr6.3:23238837-23238856 | None:intergenic | 20.0% |
| !! | TAATAATTTAAGGGTAGAAT+TGG | - | chr6.3:23243226-23243245 | None:intergenic | 20.0% |
| !! | TATTATGAGAGAATTTGAAA+AGG | + | chr6.3:23240213-23240232 | MS.gene74676:intron | 20.0% |
| !! | TGAGTATAATCAAATATCTT+TGG | + | chr6.3:23242932-23242951 | MS.gene74676:CDS | 20.0% |
| !! | TGATTATTTATCCTATAACA+CGG | - | chr6.3:23243642-23243661 | None:intergenic | 20.0% |
| !! | TGCTGACAATAATAATTTAA+GGG | - | chr6.3:23243235-23243254 | None:intergenic | 20.0% |
| !! | TTAGAAACACTGTTATTAAA+CGG | + | chr6.3:23239596-23239615 | MS.gene74676:intron | 20.0% |
| !! | TTGAAAATTTCCTAGAATTT+GGG | + | chr6.3:23239790-23239809 | MS.gene74676:intron | 20.0% |
| !! | TTTGAAAATTTCCTAGAATT+TGG | + | chr6.3:23239789-23239808 | MS.gene74676:intron | 20.0% |
| !!! | AATTTTTAGATGTCATATGT+TGG | + | chr6.3:23241398-23241417 | MS.gene74676:intron | 20.0% |
| !!! | CCAAATTTTCCTATTTATTT+AGG | - | chr6.3:23240188-23240207 | None:intergenic | 20.0% |
| !!! | GTGTATATTTGAACATATTT+TGG | + | chr6.3:23238588-23238607 | MS.gene74676:intron | 20.0% |
| !!! | TATGGTTTTAAAATGAAAGA+AGG | + | chr6.3:23240046-23240065 | MS.gene74676:intron | 20.0% |
| !!! | TTTCCTATTTATTTAGGATT+TGG | - | chr6.3:23240182-23240201 | None:intergenic | 20.0% |
| !!! | TTTGATTTGAAATGGATTTT+TGG | - | chr6.3:23240853-23240872 | None:intergenic | 20.0% |
| !!! | TTTGCTGAAAATTTGATTTT+TGG | + | chr6.3:23240917-23240936 | MS.gene74676:intron | 20.0% |
| ! | AAAAACACGAAATGATGAAA+TGG | - | chr6.3:23239090-23239109 | None:intergenic | 25.0% |
| ! | AAAAACCATGAGATAAAGTT+AGG | + | chr6.3:23240751-23240770 | MS.gene74676:intron | 25.0% |
| ! | AAGCAAATACATCAAACATT+CGG | - | chr6.3:23242769-23242788 | None:intergenic | 25.0% |
| ! | AATTCATACATTGTGAAAGT+TGG | - | chr6.3:23239243-23239262 | None:intergenic | 25.0% |
| ! | AATTGAATCAAAGATGAGTT+GGG | + | chr6.3:23241997-23242016 | MS.gene74676:CDS | 25.0% |
| ! | ACATAATGTTATAATTGACC+AGG | + | chr6.3:23238356-23238375 | MS.gene74676:intron | 25.0% |
| ! | ACCTTGTATAGATTTCAAAT+AGG | - | chr6.3:23243809-23243828 | None:intergenic | 25.0% |
| ! | ACTCCAAATCCTAAATAAAT+AGG | + | chr6.3:23240176-23240195 | MS.gene74676:intron | 25.0% |
| ! | CAAGAATATATTCAGATTCA+AGG | - | chr6.3:23239020-23239039 | None:intergenic | 25.0% |
| ! | CACACTATTTCATTATTCAT+AGG | + | chr6.3:23241792-23241811 | MS.gene74676:intron | 25.0% |
| ! | CATAATGTTATAATTGACCA+GGG | + | chr6.3:23238357-23238376 | MS.gene74676:intron | 25.0% |
| ! | CCAAGAATTAGTTACATAAA+AGG | + | chr6.3:23242629-23242648 | MS.gene74676:intron | 25.0% |
| ! | CCATTGTAAAACTATTATGA+TGG | + | chr6.3:23241219-23241238 | MS.gene74676:intron | 25.0% |
| ! | GAATCTGAATATATTCTTGT+AGG | + | chr6.3:23239021-23239040 | MS.gene74676:CDS | 25.0% |
| ! | GATGTTTAATGAATATAGCA+AGG | - | chr6.3:23238698-23238717 | None:intergenic | 25.0% |
| ! | GATTTAAAAGACCAAATTCA+AGG | - | chr6.3:23243717-23243736 | None:intergenic | 25.0% |
| ! | GTAATTGATACATAGAATCA+TGG | + | chr6.3:23244045-23244064 | MS.gene74676:intron | 25.0% |
| ! | GTTTCTAAATATACGTTGTA+TGG | - | chr6.3:23239584-23239603 | None:intergenic | 25.0% |
| ! | TAAAATGCAATCTTCACTAT+AGG | - | chr6.3:23240826-23240845 | None:intergenic | 25.0% |
| ! | TACTAGTGTTTATTAGTGTA+GGG | + | chr6.3:23242183-23242202 | MS.gene74676:intron | 25.0% |
| ! | TAGAAAACGTAATAGTATCA+TGG | - | chr6.3:23242147-23242166 | None:intergenic | 25.0% |
| ! | TAGTTTGATACAAAAGACTA+AGG | + | chr6.3:23240127-23240146 | MS.gene74676:intron | 25.0% |
| ! | TATACAAAAAGTGAATGATC+AGG | - | chr6.3:23243561-23243580 | None:intergenic | 25.0% |
| ! | TATGTATTGTTTGTGTGTAT+GGG | + | chr6.3:23241185-23241204 | MS.gene74676:intron | 25.0% |
| ! | TTACTAGTGTTTATTAGTGT+AGG | + | chr6.3:23242182-23242201 | MS.gene74676:intron | 25.0% |
| ! | TTATTTAAACTGTAGTTCCA+AGG | + | chr6.3:23239421-23239440 | MS.gene74676:intron | 25.0% |
| ! | TTCAGATGTTCAAATATACA+TGG | - | chr6.3:23238564-23238583 | None:intergenic | 25.0% |
| !! | CCTTTTATGTAACTAATTCT+TGG | - | chr6.3:23242632-23242651 | None:intergenic | 25.0% |
| !! | GTAGAAATGAATTTGCATTT+TGG | + | chr6.3:23241319-23241338 | MS.gene74676:intron | 25.0% |
| !! | GTCTATCCCAAATATATTTT+TGG | - | chr6.3:23240007-23240026 | None:intergenic | 25.0% |
| !! | TACAATTAACCACGATTTTT+AGG | - | chr6.3:23238647-23238666 | None:intergenic | 25.0% |
| !! | TATATCTACCAGAATCTTTT+GGG | - | chr6.3:23244136-23244155 | None:intergenic | 25.0% |
| !! | TCCTATTTGAAATCTATACA+AGG | + | chr6.3:23243805-23243824 | MS.gene74676:intron | 25.0% |
| !! | TCTAGGAAATTTTCAAATTC+AGG | - | chr6.3:23239786-23239805 | None:intergenic | 25.0% |
| !! | TTATATCTACCAGAATCTTT+TGG | - | chr6.3:23244137-23244156 | None:intergenic | 25.0% |
| !! | TTGAAATTTGTGTGCTTTTA+TGG | + | chr6.3:23241761-23241780 | MS.gene74676:intron | 25.0% |
| !!! | AAACAACAGTTATTTTGGAA+CGG | - | chr6.3:23243138-23243157 | None:intergenic | 25.0% |
| !!! | AACATATTTTGGATGATTAG+TGG | + | chr6.3:23238599-23238618 | MS.gene74676:intron | 25.0% |
| !!! | AGTGGATTATGTATGTATAT+TGG | + | chr6.3:23238617-23238636 | MS.gene74676:intron | 25.0% |
| !!! | ATGATTTTCAACTCTTGTTT+TGG | + | chr6.3:23238845-23238864 | MS.gene74676:intron | 25.0% |
| !!! | ATTTGCATTTTGGTTTTAAG+AGG | + | chr6.3:23241329-23241348 | MS.gene74676:intron | 25.0% |
| !!! | CCAAAATAACTGTTGTTTTA+GGG | + | chr6.3:23243140-23243159 | MS.gene74676:intron | 25.0% |
| !!! | CCATCATAATAGTTTTACAA+TGG | - | chr6.3:23241222-23241241 | None:intergenic | 25.0% |
| !!! | TCCAAAATAACTGTTGTTTT+AGG | + | chr6.3:23243139-23243158 | MS.gene74676:intron | 25.0% |
| AAACTAAAAAGAACCGAATG+TGG | + | chr6.3:23243939-23243958 | MS.gene74676:intron | 30.0% | |
| AAATAAAATCAAGAGAGGAG+AGG | + | chr6.3:23241268-23241287 | MS.gene74676:intron | 30.0% | |
| AATGATGACACTCTTTGAAT+CGG | + | chr6.3:23242660-23242679 | MS.gene74676:intron | 30.0% | |
| AATTAGCATACATGTGTAAG+AGG | - | chr6.3:23243070-23243089 | None:intergenic | 30.0% | |
| AATTTCGACAACAAACTAGA+TGG | - | chr6.3:23238759-23238778 | None:intergenic | 30.0% | |
| ACGAGAGAAAAGGTAAATTA+TGG | + | chr6.3:23241426-23241445 | MS.gene74676:intron | 30.0% | |
| AGAAATTAATGGCTGACATT+AGG | - | chr6.3:23242870-23242889 | None:intergenic | 30.0% | |
| AGAATGAAATTAGAATGGCT+TGG | - | chr6.3:23243465-23243484 | None:intergenic | 30.0% | |
| AGATTGTTGACATAGTTTAG+TGG | + | chr6.3:23238429-23238448 | MS.gene74676:intron | 30.0% | |
| AGGTGGTCCAAAAATATATT+TGG | + | chr6.3:23239997-23240016 | MS.gene74676:intron | 30.0% | |
| ATGACAATCTGATTGTTCTT+CGG | + | chr6.3:23242029-23242048 | MS.gene74676:CDS | 30.0% | |
| ATTAACCACGATTTGTGTTA+TGG | - | chr6.3:23238536-23238555 | None:intergenic | 30.0% | |
| ATTAACCATAACACAAATCG+TGG | + | chr6.3:23238528-23238547 | MS.gene74676:intron | 30.0% | |
| ATTAATTTCTCAGGTTTAGC+CGG | + | chr6.3:23242880-23242899 | MS.gene74676:intron | 30.0% | |
| ATTTCAAATCAAACCCAATG+TGG | + | chr6.3:23240860-23240879 | MS.gene74676:intron | 30.0% | |
| ATTTGGAAACAAAATCTGGT+AGG | + | chr6.3:23240422-23240441 | MS.gene74676:intron | 30.0% | |
| CAAAAGAAAAACCTCTAGAT+AGG | - | chr6.3:23243028-23243047 | None:intergenic | 30.0% | |
| CAATTGAATCAAAGATGAGT+TGG | + | chr6.3:23241996-23242015 | MS.gene74676:CDS | 30.0% | |
| CGCAAAGAATGAAATTAGAA+TGG | - | chr6.3:23243470-23243489 | None:intergenic | 30.0% | |
| CTAGAAAATTTCCGTGTTAT+AGG | + | chr6.3:23243628-23243647 | MS.gene74676:intron | 30.0% | |
| CTGTTTAGATTACGACAATT+TGG | - | chr6.3:23243348-23243367 | None:intergenic | 30.0% | |
| CTTGATACAACTTGTATAGA+TGG | - | chr6.3:23243287-23243306 | None:intergenic | 30.0% | |
| CTTTCGCTTTATAATTGAGT+TGG | - | chr6.3:23243901-23243920 | None:intergenic | 30.0% | |
| GAAAAAACTGCTTAATACGA+TGG | + | chr6.3:23240262-23240281 | MS.gene74676:intron | 30.0% | |
| GAAGAGAAACACAAATTACA+AGG | - | chr6.3:23241849-23241868 | None:intergenic | 30.0% | |
| GAATATATTCTTGTAGGATG+TGG | + | chr6.3:23239027-23239046 | MS.gene74676:CDS | 30.0% | |
| GATCAAATCAATAAGCTCAT+CGG | - | chr6.3:23239055-23239074 | None:intergenic | 30.0% | |
| GATGCTAATGAAAATCCTTA+TGG | + | chr6.3:23238261-23238280 | MS.gene74676:CDS | 30.0% | |
| GCATCAAATAAAATCAAGAG+AGG | + | chr6.3:23241263-23241282 | MS.gene74676:intron | 30.0% | |
| GGCATAAAGATGTTGAAAAA+GGG | - | chr6.3:23239563-23239582 | None:intergenic | 30.0% | |
| GGTGGTCCAAAAATATATTT+GGG | + | chr6.3:23239998-23240017 | MS.gene74676:intron | 30.0% | |
| GTATGTATTGTTTGTGTGTA+TGG | + | chr6.3:23241184-23241203 | MS.gene74676:intron | 30.0% | |
| TAGGCTTATATACTCAGTTT+CGG | + | chr6.3:23240698-23240717 | MS.gene74676:intron | 30.0% | |
| TAGGGTTATTGTTGAAGTAA+TGG | + | chr6.3:23242201-23242220 | MS.gene74676:intron | 30.0% | |
| TGGCATAAAGATGTTGAAAA+AGG | - | chr6.3:23239564-23239583 | None:intergenic | 30.0% | |
| TTCTAATTTCATTCTTTGCG+AGG | + | chr6.3:23243470-23243489 | MS.gene74676:CDS | 30.0% | |
| ! | AAATTAGAATGGCTTGGAAA+TGG | - | chr6.3:23243459-23243478 | None:intergenic | 30.0% |
| ! | AATGAAGTTAACCACGATTT+TGG | + | chr6.3:23238500-23238519 | MS.gene74676:intron | 30.0% |
| ! | AGTTATTTCCCAAAAGATTC+TGG | + | chr6.3:23244125-23244144 | MS.gene74676:intron | 30.0% |
| ! | ATAATTTACCTTTTCTCTCG+TGG | - | chr6.3:23241427-23241446 | None:intergenic | 30.0% |
| ! | CATCATTTCGTGTTTTTCAT+TGG | + | chr6.3:23239093-23239112 | MS.gene74676:intron | 30.0% |
| ! | CCCTAAAACAACAGTTATTT+TGG | - | chr6.3:23243143-23243162 | None:intergenic | 30.0% |
| ! | CTATAACACGGAAATTTTCT+AGG | - | chr6.3:23243630-23243649 | None:intergenic | 30.0% |
| ! | GAGTTCTTTGACTTAAATCT+TGG | - | chr6.3:23241068-23241087 | None:intergenic | 30.0% |
| ! | GTTAGCTTCTGATCAATATA+TGG | + | chr6.3:23241870-23241889 | MS.gene74676:intron | 30.0% |
| ! | TCAAACACACTCATTTGTTA+TGG | - | chr6.3:23242518-23242537 | None:intergenic | 30.0% |
| ! | TGTCATTTGGAAACAAAATC+TGG | + | chr6.3:23240418-23240437 | MS.gene74676:intron | 30.0% |
| ! | TTCTACTCATTTTCCACATT+CGG | - | chr6.3:23243955-23243974 | None:intergenic | 30.0% |
| ! | TTTGGAGCATGAAATTAGTA+CGG | + | chr6.3:23239875-23239894 | MS.gene74676:intron | 30.0% |
| !! | ACATTGGGTTTGATTTGAAA+TGG | - | chr6.3:23240861-23240880 | None:intergenic | 30.0% |
| !! | AGATTTTGTTTCCAAATGAC+AGG | - | chr6.3:23240419-23240438 | None:intergenic | 30.0% |
| !! | AGCTTATTGATTTGATCATG+CGG | + | chr6.3:23239058-23239077 | MS.gene74676:CDS | 30.0% |
| !! | ATTTGGAGCATGAAATTTTC+AGG | + | chr6.3:23239945-23239964 | MS.gene74676:intron | 30.0% |
| !! | GAAAGTTGATAACAAAACCA+AGG | - | chr6.3:23239355-23239374 | None:intergenic | 30.0% |
| !! | TATTGGAGTTTTGACATGAT+AGG | + | chr6.3:23238903-23238922 | MS.gene74676:intron | 30.0% |
| AAAATTAAATGGCTCACCTC+TGG | - | chr6.3:23238294-23238313 | None:intergenic | 35.0% | |
| AAATTTCAACCCTACGACTA+AGG | - | chr6.3:23241750-23241769 | None:intergenic | 35.0% | |
| AAGAAGTCTTCGTGTGTTAT+AGG | + | chr6.3:23243674-23243693 | MS.gene74676:intron | 35.0% | |
| ACAACACCGTTTAGAAAACT+AGG | + | chr6.3:23239758-23239777 | MS.gene74676:intron | 35.0% | |
| ACAGAATGTCAAAGATGCTT+TGG | + | chr6.3:23243380-23243399 | MS.gene74676:intron | 35.0% | |
| ACCCTAAAATACCAATGCAA+CGG | - | chr6.3:23241625-23241644 | None:intergenic | 35.0% | |
| ACTCCTAATCCTGAATATAG+AGG | + | chr6.3:23242328-23242347 | MS.gene74676:intron | 35.0% | |
| ACTGTTGAGAACCTTGAATT+TGG | + | chr6.3:23243703-23243722 | MS.gene74676:intron | 35.0% | |
| AGAAAAACCTCTAGATAGGT+AGG | - | chr6.3:23243024-23243043 | None:intergenic | 35.0% | |
| AGTTGATCCAAAGAAGCTAA+AGG | + | chr6.3:23243503-23243522 | MS.gene74676:CDS | 35.0% | |
| ATATTCAGGATTAGGAGTCT+TGG | - | chr6.3:23242326-23242345 | None:intergenic | 35.0% | |
| ATCAGCTCAGAATCAGTTAT+GGG | + | chr6.3:23241136-23241155 | MS.gene74676:intron | 35.0% | |
| ATGCTTTGGTGAAAGAAAGA+GGG | + | chr6.3:23243394-23243413 | MS.gene74676:CDS | 35.0% | |
| ATGTCAGCCATTAATTTCTC+AGG | + | chr6.3:23242871-23242890 | MS.gene74676:intron | 35.0% | |
| CATCATAATAGGTTCAGAGT+TGG | + | chr6.3:23239920-23239939 | MS.gene74676:intron | 35.0% | |
| CGTAATAGTATCATGGTTCA+TGG | - | chr6.3:23242140-23242159 | None:intergenic | 35.0% | |
| CTAGTTATGCATATCTGACA+TGG | - | chr6.3:23239395-23239414 | None:intergenic | 35.0% | |
| CTCAGAAAGTAATGTCTGAA+TGG | + | chr6.3:23240650-23240669 | MS.gene74676:intron | 35.0% | |
| CTCCTAATCCTGAATATAGA+GGG | + | chr6.3:23242329-23242348 | MS.gene74676:intron | 35.0% | |
| CTGATGCTATGTTGGATTTA+TGG | + | chr6.3:23240028-23240047 | MS.gene74676:intron | 35.0% | |
| GAAATGTACATATGTTGACG+AGG | + | chr6.3:23241354-23241373 | MS.gene74676:intron | 35.0% | |
| GAAATTAGTACGGCATTAAC+TGG | + | chr6.3:23239885-23239904 | MS.gene74676:intron | 35.0% | |
| GAACGTGGAACAAATAATAG+AGG | + | chr6.3:23239461-23239480 | MS.gene74676:CDS | 35.0% | |
| GACGAGGAAAAAATATTCGA+GGG | + | chr6.3:23241370-23241389 | MS.gene74676:intron | 35.0% | |
| GATACATTGAACCTGTCATT+TGG | + | chr6.3:23240405-23240424 | MS.gene74676:intron | 35.0% | |
| GATGTCCTAACTTTATCTCA+TGG | - | chr6.3:23240759-23240778 | None:intergenic | 35.0% | |
| GCAGCAACAGATACATTATA+CGG | - | chr6.3:23242970-23242989 | None:intergenic | 35.0% | |
| GGCTAAACCTGAGAAATTAA+TGG | - | chr6.3:23242881-23242900 | None:intergenic | 35.0% | |
| GGTTAATTGTATTGTGTGGA+CGG | + | chr6.3:23238656-23238675 | MS.gene74676:intron | 35.0% | |
| GTTAATGACTTCCAAAATCG+TGG | - | chr6.3:23238514-23238533 | None:intergenic | 35.0% | |
| GTTGTTTGCGACATATAACA+TGG | + | chr6.3:23242830-23242849 | MS.gene74676:intron | 35.0% | |
| TAATCAGGATATTGTAGCTC+TGG | - | chr6.3:23240592-23240611 | None:intergenic | 35.0% | |
| TACAGCAATAAAGAGCTGAA+AGG | + | chr6.3:23244266-23244285 | MS.gene74676:CDS | 35.0% | |
| TCATACATTGTGAAAGTTGG+AGG | - | chr6.3:23239240-23239259 | None:intergenic | 35.0% | |
| TCGTGGTTAATTGTATTGTG+TGG | + | chr6.3:23238652-23238671 | MS.gene74676:intron | 35.0% | |
| TCTTGGATCTCGATAAACAA+GGG | - | chr6.3:23242309-23242328 | None:intergenic | 35.0% | |
| TGACGAGGAAAAAATATTCG+AGG | + | chr6.3:23241369-23241388 | MS.gene74676:intron | 35.0% | |
| TGACTTTACCTCTAGCATAT+CGG | + | chr6.3:23240967-23240986 | MS.gene74676:intron | 35.0% | |
| TGATTATCACATAAAACCCG+AGG | + | chr6.3:23240606-23240625 | MS.gene74676:intron | 35.0% | |
| TGGGAAATAACTTCACTCTT+CGG | - | chr6.3:23244117-23244136 | None:intergenic | 35.0% | |
| TGTTGACATAGTTTAGTGGA+TGG | + | chr6.3:23238433-23238452 | MS.gene74676:intron | 35.0% | |
| TTCCCTCTATATTCAGGATT+AGG | - | chr6.3:23242334-23242353 | None:intergenic | 35.0% | |
| TTTAAACTGTAGTTCCAAGG+AGG | + | chr6.3:23239424-23239443 | MS.gene74676:intron | 35.0% | |
| ! | AATGCAACGGTTCGTTTTAA+GGG | - | chr6.3:23241612-23241631 | None:intergenic | 35.0% |
| ! | CTTAAATCTTGGTGCAAATC+TGG | - | chr6.3:23241057-23241076 | None:intergenic | 35.0% |
| ! | GAATGTACCTTTAGCTTCTT+TGG | - | chr6.3:23243513-23243532 | None:intergenic | 35.0% |
| ! | GTTGACATAGTTTAGTGGAT+GGG | + | chr6.3:23238434-23238453 | MS.gene74676:intron | 35.0% |
| ! | TGGTTTTTCTAAGCACATTG+TGG | - | chr6.3:23240739-23240758 | None:intergenic | 35.0% |
| !! | AACAATTTTTCAACAGCGAG+AGG | - | chr6.3:23238328-23238347 | None:intergenic | 35.0% |
| !! | AACCGTTGCATTGGTATTTT+AGG | + | chr6.3:23241620-23241639 | MS.gene74676:intron | 35.0% |
| !! | ACCGTTGCATTGGTATTTTA+GGG | + | chr6.3:23241621-23241640 | MS.gene74676:intron | 35.0% |
| !! | AGAGGTATTTAGAGAAGGAA+AGG | + | chr6.3:23241286-23241305 | MS.gene74676:intron | 35.0% |
| !! | AGTTTTGACATGATAGGTCA+TGG | + | chr6.3:23238909-23238928 | MS.gene74676:intron | 35.0% |
| !! | CAGGTACCTAGTTTTCTAAA+CGG | - | chr6.3:23239767-23239786 | None:intergenic | 35.0% |
| !! | GATTTTGACAACCTTGCTTT+TGG | - | chr6.3:23243762-23243781 | None:intergenic | 35.0% |
| !! | TAGTTTTCTAAACGGTGTTG+TGG | - | chr6.3:23239759-23239778 | None:intergenic | 35.0% |
| !! | TCGGGTTTTATGTGATAATC+AGG | - | chr6.3:23240607-23240626 | None:intergenic | 35.0% |
| !! | TGTCTGAATGGATTACAGTT+CGG | + | chr6.3:23240662-23240681 | MS.gene74676:intron | 35.0% |
| !!! | AACAGTTATTTTGGAACGGA+GGG | - | chr6.3:23243134-23243153 | None:intergenic | 35.0% |
| !!! | GTTCGTTTTAAGGGTATTGT+GGG | - | chr6.3:23241603-23241622 | None:intergenic | 35.0% |
| !!! | TTCGTTTTAAGGGTATTGTG+GGG | - | chr6.3:23241602-23241621 | None:intergenic | 35.0% |
| AAGGTTCAAGCCCAAATTCT+AGG | - | chr6.3:23239803-23239822 | None:intergenic | 40.0% | |
| ACATAAAACCCGAGGAACAT+TGG | + | chr6.3:23240614-23240633 | MS.gene74676:intron | 40.0% | |
| ACATCTCCAAACAATCCAGA+TGG | + | chr6.3:23239519-23239538 | MS.gene74676:CDS | 40.0% | |
| ACGATTCCCATATGTCTATC+CGG | + | chr6.3:23238948-23238967 | MS.gene74676:CDS | 40.0% | |
| AGACGTTCAGAACAGAAAGA+AGG | - | chr6.3:23241671-23241690 | None:intergenic | 40.0% | |
| AGATTCAAGGCCTGAATCTT+GGG | - | chr6.3:23239007-23239026 | None:intergenic | 40.0% | |
| AGGAATTGCCATCTTCATGT+TGG | + | chr6.3:23239965-23239984 | MS.gene74676:intron | 40.0% | |
| ATAAGCACATCTGTGTGTTC+AGG | - | chr6.3:23244317-23244336 | None:intergenic | 40.0% | |
| ATTACAGTCCAGCATATTCC+TGG | - | chr6.3:23240488-23240507 | None:intergenic | 40.0% | |
| ATTAGTACGGCATTAACTGG+CGG | + | chr6.3:23239888-23239907 | MS.gene74676:intron | 40.0% | |
| ATTCTTTGCGAGGTTACATC+TGG | + | chr6.3:23243480-23243499 | MS.gene74676:CDS | 40.0% | |
| ATTGTTGGCCAACATGAAGA+TGG | - | chr6.3:23239976-23239995 | None:intergenic | 40.0% | |
| CATCTATCTCTCCAAAAGCA+AGG | + | chr6.3:23243748-23243767 | MS.gene74676:intron | 40.0% | |
| CATCTCCAAACAATCCAGAT+GGG | + | chr6.3:23239520-23239539 | MS.gene74676:CDS | 40.0% | |
| CCTGAATATAGAGGGAAATC+AGG | + | chr6.3:23242337-23242356 | MS.gene74676:intron | 40.0% | |
| CCTGATTTCCCTCTATATTC+AGG | - | chr6.3:23242340-23242359 | None:intergenic | 40.0% | |
| CGCTTAAAGAACTGGATTGT+GGG | + | chr6.3:23240566-23240585 | MS.gene74676:intron | 40.0% | |
| CTTAAAACGAACCGTTGCAT+TGG | + | chr6.3:23241611-23241630 | MS.gene74676:intron | 40.0% | |
| CTTGGAAATGGCTTAAGGAA+TGG | - | chr6.3:23243447-23243466 | None:intergenic | 40.0% | |
| GAATTTGACGCTGCAGTTAA+TGG | + | chr6.3:23239258-23239277 | MS.gene74676:CDS | 40.0% | |
| GAGGGAGTAACAAGTATAGA+TGG | - | chr6.3:23243116-23243135 | None:intergenic | 40.0% | |
| GATAGACTCTGATGCTATGT+TGG | + | chr6.3:23240020-23240039 | MS.gene74676:intron | 40.0% | |
| GATCAGCTCAGAATCAGTTA+TGG | + | chr6.3:23241135-23241154 | MS.gene74676:intron | 40.0% | |
| GATGCTTTGGTGAAAGAAAG+AGG | + | chr6.3:23243393-23243412 | MS.gene74676:CDS | 40.0% | |
| GCAAAATCCTACCTATCTAG+AGG | + | chr6.3:23243014-23243033 | MS.gene74676:CDS | 40.0% | |
| GCTTCAATGGTGTGCTTATA+TGG | + | chr6.3:23239702-23239721 | MS.gene74676:intron | 40.0% | |
| GGAAACAAAATCTGGTAGGA+CGG | + | chr6.3:23240426-23240445 | MS.gene74676:intron | 40.0% | |
| GGTGCATCTCACATCATAAT+AGG | + | chr6.3:23239909-23239928 | MS.gene74676:intron | 40.0% | |
| GTATTGTTTGTGTGTATGGG+CGG | + | chr6.3:23241188-23241207 | MS.gene74676:intron | 40.0% | |
| GTCTTGGATCTCGATAAACA+AGG | - | chr6.3:23242310-23242329 | None:intergenic | 40.0% | |
| TACAGTTGTGTTCTTGATCC+CGG | + | chr6.3:23239195-23239214 | MS.gene74676:intron | 40.0% | |
| TAGGTTCAGAGTTGGACATT+TGG | + | chr6.3:23239928-23239947 | MS.gene74676:intron | 40.0% | |
| TCAGCTCTTTATTGCTGTAG+TGG | - | chr6.3:23244265-23244284 | None:intergenic | 40.0% | |
| TCCAGAAATTGATCTTGTCC+AGG | + | chr6.3:23240467-23240486 | MS.gene74676:intron | 40.0% | |
| TCCTGGACAAGATCAATTTC+TGG | - | chr6.3:23240471-23240490 | None:intergenic | 40.0% | |
| TCGGAGCAAGGTTGTTAAAA+TGG | - | chr6.3:23244098-23244117 | None:intergenic | 40.0% | |
| TCGTGGTTAACTTCATTCAG+TGG | - | chr6.3:23238497-23238516 | None:intergenic | 40.0% | |
| TGACACTCTTTGAATCGGAA+TGG | + | chr6.3:23242665-23242684 | MS.gene74676:intron | 40.0% | |
| TGGGAAGTAAACCTTGATGA+CGG | - | chr6.3:23240795-23240814 | None:intergenic | 40.0% | |
| TGTCATAGCCAATTTGCGAA+AGG | + | chr6.3:23239655-23239674 | MS.gene74676:intron | 40.0% | |
| TTAAGCGCACACTGAACAAT+TGG | - | chr6.3:23240553-23240572 | None:intergenic | 40.0% | |
| ! | AAATCTTGGTGCAAATCTGG+AGG | - | chr6.3:23241054-23241073 | None:intergenic | 40.0% |
| ! | AATGGAGCACTTGTCATCAA+AGG | + | chr6.3:23239276-23239295 | MS.gene74676:CDS | 40.0% |
| ! | AATGGCTTGGAAATGGCTTA+AGG | - | chr6.3:23243452-23243471 | None:intergenic | 40.0% |
| ! | ATTGGAGCACCTAAAAATCG+TGG | + | chr6.3:23238635-23238654 | MS.gene74676:intron | 40.0% |
| ! | CAATGCAACGGTTCGTTTTA+AGG | - | chr6.3:23241613-23241632 | None:intergenic | 40.0% |
| ! | GAGGCTTTTTGACCTTTTGA+AGG | + | chr6.3:23243416-23243435 | MS.gene74676:CDS | 40.0% |
| ! | TCTAGCTTGACAATATCCTC+AGG | - | chr6.3:23238243-23238262 | None:intergenic | 40.0% |
| ! | TTCACTATAGGATGCTGACT+GGG | - | chr6.3:23240814-23240833 | None:intergenic | 40.0% |
| ! | TTTTTGGACCACCTGATTGT+TGG | - | chr6.3:23239991-23240010 | None:intergenic | 40.0% |
| !! | AGAGGAGAGGTATTTAGAGA+AGG | + | chr6.3:23241281-23241300 | MS.gene74676:intron | 40.0% |
| !! | CAGGTTTTATCTTCTCGTCT+TGG | + | chr6.3:23238210-23238229 | MS.gene74676:CDS | 40.0% |
| !! | TAAGGGTATTGTGGGGATTT+CGG | - | chr6.3:23241595-23241614 | None:intergenic | 40.0% |
| !! | TATGGCAGATTTTGACCTTC+AGG | + | chr6.3:23239720-23239739 | MS.gene74676:intron | 40.0% |
| !! | TTGTCTCTCGAGTTGACTAT+TGG | + | chr6.3:23238886-23238905 | MS.gene74676:intron | 40.0% |
| !!! | ACATGCTGTTTTGTGAACAC+AGG | + | chr6.3:23244208-23244227 | MS.gene74676:intron | 40.0% |
| !!! | CAACAGTTATTTTGGAACGG+AGG | - | chr6.3:23243135-23243154 | None:intergenic | 40.0% |
| !!! | GGTTCGTTTTAAGGGTATTG+TGG | - | chr6.3:23241604-23241623 | None:intergenic | 40.0% |
| AAATTGACCTCCCGTCATCA+AGG | + | chr6.3:23240781-23240800 | MS.gene74676:intron | 45.0% | |
| AAGCACACCATTGAAGCCTA+TGG | - | chr6.3:23239699-23239718 | None:intergenic | 45.0% | |
| ACAACTGTAAAACAGTGCCC+TGG | - | chr6.3:23238377-23238396 | None:intergenic | 45.0% | |
| ACAGGAAGACCTAGCAGAAA+TGG | + | chr6.3:23244226-23244245 | MS.gene74676:intron | 45.0% | |
| ACAGTCGACAATCTTGTCAC+CGG | - | chr6.3:23239217-23239236 | None:intergenic | 45.0% | |
| ACCAGCGATCACAATTTGAC+AGG | + | chr6.3:23240889-23240908 | MS.gene74676:intron | 45.0% | |
| ACCTGTCAAATTGTGATCGC+TGG | - | chr6.3:23240893-23240912 | None:intergenic | 45.0% | |
| AGTCAAGACCGATATGCTAG+AGG | - | chr6.3:23240978-23240997 | None:intergenic | 45.0% | |
| ATCTGACACAGCATTCTGTC+TGG | - | chr6.3:23239625-23239644 | None:intergenic | 45.0% | |
| ATTAAATGGCTCACCTCTGG+AGG | - | chr6.3:23238291-23238310 | None:intergenic | 45.0% | |
| ATTGGCGTCCTTTCGCAAAT+TGG | - | chr6.3:23239666-23239685 | None:intergenic | 45.0% | |
| CAAAACCAAGGACTGCTAAG+AGG | - | chr6.3:23239343-23239362 | None:intergenic | 45.0% | |
| CAAATCTGGAGGCAGACTAA+TGG | - | chr6.3:23241043-23241062 | None:intergenic | 45.0% | |
| CAGATTCAAGGCCTGAATCT+TGG | - | chr6.3:23239008-23239027 | None:intergenic | 45.0% | |
| CAGGAAGACCTAGCAGAAAT+GGG | + | chr6.3:23244227-23244246 | MS.gene74676:intron | 45.0% | |
| CCTTACTCAATCCCAAAAGC+TGG | + | chr6.3:23239819-23239838 | MS.gene74676:intron | 45.0% | |
| CTAGATAGTTACCTCCCATC+TGG | - | chr6.3:23239537-23239556 | None:intergenic | 45.0% | |
| CTATCATCGCGAGTACATCA+AGG | - | chr6.3:23241015-23241034 | None:intergenic | 45.0% | |
| CTGGATCCGGATAGACATAT+GGG | - | chr6.3:23238957-23238976 | None:intergenic | 45.0% | |
| CTTCACTATAGGATGCTGAC+TGG | - | chr6.3:23240815-23240834 | None:intergenic | 45.0% | |
| CTTCATGTTGGCCAACAATC+AGG | + | chr6.3:23239977-23239996 | MS.gene74676:intron | 45.0% | |
| CTTCCTTGCTCAGTCAACTT+AGG | + | chr6.3:23240940-23240959 | MS.gene74676:intron | 45.0% | |
| CTTGATGTACTCGCGATGAT+AGG | + | chr6.3:23241013-23241032 | MS.gene74676:intron | 45.0% | |
| CTTTGGTGAAAGAAAGAGGG+AGG | + | chr6.3:23243397-23243416 | MS.gene74676:CDS | 45.0% | |
| GATACTTGAGCTTCCCATAC+TGG | + | chr6.3:23241940-23241959 | MS.gene74676:CDS | 45.0% | |
| GATCTTGTCCAGGAATATGC+TGG | + | chr6.3:23240477-23240496 | MS.gene74676:intron | 45.0% | |
| GCGCTTAAAGAACTGGATTG+TGG | + | chr6.3:23240565-23240584 | MS.gene74676:intron | 45.0% | |
| GGAATGGAACTGCCTTCAAA+AGG | - | chr6.3:23243431-23243450 | None:intergenic | 45.0% | |
| GGTCTTGACTCTTGACAAGT+AGG | + | chr6.3:23240988-23241007 | MS.gene74676:intron | 45.0% | |
| GTTCGGCTGTAACTTGAAGT+AGG | + | chr6.3:23240679-23240698 | MS.gene74676:intron | 45.0% | |
| TAACTTCACTCTTCGGAGCA+AGG | - | chr6.3:23244110-23244129 | None:intergenic | 45.0% | |
| TACCTCCCATCTGGATTGTT+TGG | - | chr6.3:23239528-23239547 | None:intergenic | 45.0% | |
| TAGGACGGACAGACATACTA+AGG | + | chr6.3:23240441-23240460 | MS.gene74676:intron | 45.0% | |
| TATTCTCTCATCCCCTCACA+AGG | + | chr6.3:23240343-23240362 | MS.gene74676:intron | 45.0% | |
| TCAGTGTGCGCTTAAAGAAC+TGG | + | chr6.3:23240558-23240577 | MS.gene74676:intron | 45.0% | |
| TCATCACACCCATTTCTGCT+AGG | - | chr6.3:23244238-23244257 | None:intergenic | 45.0% | |
| TCCACGTTCAAGCTGAAATC+TGG | - | chr6.3:23239450-23239469 | None:intergenic | 45.0% | |
| TCTGGATCCGGATAGACATA+TGG | - | chr6.3:23238958-23238977 | None:intergenic | 45.0% | |
| TGCAGTGAGGAATTGAGTAG+CGG | + | chr6.3:23241506-23241525 | MS.gene74676:intron | 45.0% | |
| TTAAATGGCTCACCTCTGGA+GGG | - | chr6.3:23238290-23238309 | None:intergenic | 45.0% | |
| TTCAACCCTACGACTAAGGA+CGG | - | chr6.3:23241746-23241765 | None:intergenic | 45.0% | |
| ! | ATGGGAATCGTATTGACCCT+AGG | - | chr6.3:23238939-23238958 | None:intergenic | 45.0% |
| ! | GGGAAGTAAACCTTGATGAC+GGG | - | chr6.3:23240794-23240813 | None:intergenic | 45.0% |
| ! | TCGCATCATGACCAGCTTTT+GGG | - | chr6.3:23239833-23239852 | None:intergenic | 45.0% |
| ! | TCTCCTAAGTTGACTGAGCA+AGG | - | chr6.3:23240946-23240965 | None:intergenic | 45.0% |
| ! | TGGGAATCGTATTGACCCTA+GGG | - | chr6.3:23238938-23238957 | None:intergenic | 45.0% |
| !! | AAGTAAACCTTGATGACGGG+AGG | - | chr6.3:23240791-23240810 | None:intergenic | 45.0% |
| !! | CTAAACGGTGTTGTGGATAG+CGG | - | chr6.3:23239752-23239771 | None:intergenic | 45.0% |
| !!! | CCAGCTTTTGGGATTGAGTA+AGG | - | chr6.3:23239822-23239841 | None:intergenic | 45.0% |
| !! | AAAATGTAAAAAAAATTAAA+TGG | - | chr6.3:23238305-23238324 | None:intergenic | 5.0% |
| AAGCTGAAATCTGGCCTCCT+TGG | - | chr6.3:23239441-23239460 | None:intergenic | 50.0% | |
| ACCCACCTTAACCTTGTGAG+GGG | - | chr6.3:23240357-23240376 | None:intergenic | 50.0% | |
| ACGTGTCTGCCAATGTTCCT+CGG | - | chr6.3:23240626-23240645 | None:intergenic | 50.0% | |
| ACTTGAGCTTCCCATACTGG+TGG | + | chr6.3:23241943-23241962 | MS.gene74676:CDS | 50.0% | |
| AGGACTGCTAAGAGGACGAA+AGG | - | chr6.3:23239335-23239354 | None:intergenic | 50.0% | |
| ATCCCCTCACAAGGTTAAGG+TGG | + | chr6.3:23240352-23240371 | MS.gene74676:intron | 50.0% | |
| ATCCCGTTTCACCACTAGAG+TGG | + | chr6.3:23241540-23241559 | MS.gene74676:intron | 50.0% | |
| ATGCTCCAAACGTCCAACTC+TGG | - | chr6.3:23239865-23239884 | None:intergenic | 50.0% | |
| CAAAAGCTGGTCATGATGCG+AGG | + | chr6.3:23239832-23239851 | MS.gene74676:intron | 50.0% | |
| CACCCACCTTAACCTTGTGA+GGG | - | chr6.3:23240358-23240377 | None:intergenic | 50.0% | |
| CAGTCGACAATCTTGTCACC+GGG | - | chr6.3:23239216-23239235 | None:intergenic | 50.0% | |
| CATGTTGGCCAACAATCAGG+TGG | + | chr6.3:23239980-23239999 | MS.gene74676:intron | 50.0% | |
| CGGACATTCAGCAAAAGAGC+TGG | + | chr6.3:23242049-23242068 | MS.gene74676:CDS | 50.0% | |
| CTCATCCCCTCACAAGGTTA+AGG | + | chr6.3:23240349-23240368 | MS.gene74676:intron | 50.0% | |
| CTCCAAACAATCCAGATGGG+AGG | + | chr6.3:23239523-23239542 | MS.gene74676:CDS | 50.0% | |
| GATAGGTCATGGAAGCCCTA+GGG | + | chr6.3:23238920-23238939 | MS.gene74676:intron | 50.0% | |
| GCCAGATTTCAGCTTGAACG+TGG | + | chr6.3:23239446-23239465 | MS.gene74676:CDS | 50.0% | |
| GGATCTCGATAAACAAGGGC+TGG | - | chr6.3:23242305-23242324 | None:intergenic | 50.0% | |
| GTTGGATGCCACGAGAGAAA+AGG | + | chr6.3:23241416-23241435 | MS.gene74676:intron | 50.0% | |
| TCACCCACCTTAACCTTGTG+AGG | - | chr6.3:23240359-23240378 | None:intergenic | 50.0% | |
| TCATCCAGCACCACCAGTAT+GGG | - | chr6.3:23241956-23241975 | None:intergenic | 50.0% | |
| TCCATATCCCACTCGAAGTC+CGG | - | chr6.3:23242902-23242921 | None:intergenic | 50.0% | |
| TCCCCTCACAAGGTTAAGGT+GGG | + | chr6.3:23240353-23240372 | MS.gene74676:intron | 50.0% | |
| TGATAGGTCATGGAAGCCCT+AGG | + | chr6.3:23238919-23238938 | MS.gene74676:intron | 50.0% | |
| TGCAGCACCATAGGCTTCAA+TGG | + | chr6.3:23239689-23239708 | MS.gene74676:intron | 50.0% | |
| TGCCACTCTAGTGGTGAAAC+GGG | - | chr6.3:23241545-23241564 | None:intergenic | 50.0% | |
| TGTGTGTTCAGGCTTCCCAA+CGG | - | chr6.3:23244306-23244325 | None:intergenic | 50.0% | |
| TTCATCCAGCACCACCAGTA+TGG | - | chr6.3:23241957-23241976 | None:intergenic | 50.0% | |
| TTCGTCCTCTTAGCAGTCCT+TGG | + | chr6.3:23239335-23239354 | MS.gene74676:intron | 50.0% | |
| ! | AGACTGTAGTGCCACTCTAG+TGG | - | chr6.3:23241554-23241573 | None:intergenic | 50.0% |
| ! | CTCGCATCATGACCAGCTTT+TGG | - | chr6.3:23239834-23239853 | None:intergenic | 50.0% |
| ! | GTGCCACTCTAGTGGTGAAA+CGG | - | chr6.3:23241546-23241565 | None:intergenic | 50.0% |
| ! | TAAATGGCTCACCTCTGGAG+GGG | - | chr6.3:23238289-23238308 | None:intergenic | 50.0% |
| !! | CGCTGGTCTTGAACCACATT+GGG | - | chr6.3:23240876-23240895 | None:intergenic | 50.0% |
| !! | TCGCTGGTCTTGAACCACAT+TGG | - | chr6.3:23240877-23240896 | None:intergenic | 50.0% |
| AACCCTACGACTAAGGACGG+CGG | - | chr6.3:23241743-23241762 | None:intergenic | 55.0% | |
| AGGCTGGGGACAAAGAGTCA+CGG | - | chr6.3:23241704-23241723 | None:intergenic | 55.0% | |
| AGGTTTAGCCGGACTTCGAG+TGG | + | chr6.3:23242891-23242910 | MS.gene74676:intron | 55.0% | |
| CAGGCTTCCCAACGGATACT+CGG | - | chr6.3:23244298-23244317 | None:intergenic | 55.0% | |
| CGTGTCTGCCAATGTTCCTC+GGG | - | chr6.3:23240625-23240644 | None:intergenic | 55.0% | |
| CTCACTGCATCGCAGTGTGT+GGG | - | chr6.3:23241495-23241514 | None:intergenic | 55.0% | |
| CTCCAAACGTCCAACTCTGG+CGG | - | chr6.3:23239862-23239881 | None:intergenic | 55.0% | |
| GCCAATCGTTGCAGCACCAT+AGG | + | chr6.3:23239680-23239699 | MS.gene74676:intron | 55.0% | |
| GCTACGTCCGAGTATCCGTT+GGG | + | chr6.3:23244288-23244307 | MS.gene74676:CDS | 55.0% | |
| GGTTTAGCCGGACTTCGAGT+GGG | + | chr6.3:23242892-23242911 | MS.gene74676:intron | 55.0% | |
| GTGAGGAATTGAGTAGCGGC+TGG | + | chr6.3:23241510-23241529 | MS.gene74676:intron | 55.0% | |
| TCACTGCATCGCAGTGTGTG+GGG | - | chr6.3:23241494-23241513 | None:intergenic | 55.0% | |
| ! | AAATGGCTCACCTCTGGAGG+GGG | - | chr6.3:23238288-23238307 | None:intergenic | 55.0% |
| !! | GCCTATGGTGCTGCAACGAT+TGG | - | chr6.3:23239684-23239703 | None:intergenic | 55.0% |
| !! | GGATAGCGGAGTATGCCTGA+AGG | - | chr6.3:23239738-23239757 | None:intergenic | 55.0% |
| AATCGGCGGCTCTCTGGATC+CGG | - | chr6.3:23238970-23238989 | None:intergenic | 60.0% | |
| ACCCTACGACTAAGGACGGC+GGG | - | chr6.3:23241742-23241761 | None:intergenic | 60.0% | |
| CACCGCCAGAGTTGGACGTT+TGG | + | chr6.3:23239857-23239876 | MS.gene74676:intron | 60.0% | |
| CACTGCATCGCAGTGTGTGG+GGG | - | chr6.3:23241493-23241512 | None:intergenic | 60.0% | |
| CCACACACTGCGATGCAGTG+AGG | + | chr6.3:23241493-23241512 | MS.gene74676:intron | 60.0% | |
| CCTCACTGCATCGCAGTGTG+TGG | - | chr6.3:23241496-23241515 | None:intergenic | 60.0% | |
| GCAGCTCTCGCCCAAGATTC+AGG | + | chr6.3:23238994-23239013 | MS.gene74676:CDS | 60.0% | |
| GCCGGACTTCGAGTGGGATA+TGG | + | chr6.3:23242898-23242917 | MS.gene74676:CDS | 60.0% | |
| GGCTACGTCCGAGTATCCGT+TGG | + | chr6.3:23244287-23244306 | MS.gene74676:CDS | 60.0% | |
| TCCTTATGGACCCCCTCCAG+AGG | + | chr6.3:23238275-23238294 | MS.gene74676:CDS | 60.0% | |
| TCGTCTTGGACGCAAGCCTG+AGG | + | chr6.3:23238224-23238243 | MS.gene74676:CDS | 60.0% | |
| ! | ACCTCTGGAGGGGGTCCATA+AGG | - | chr6.3:23238279-23238298 | None:intergenic | 60.0% |
| ! | GCTTCCCATACTGGTGGTGC+TGG | + | chr6.3:23241949-23241968 | MS.gene74676:CDS | 60.0% |
| CCCCGCCGTCCTTAGTCGTA+GGG | + | chr6.3:23241738-23241757 | MS.gene74676:intron | 65.0% | |
| CCCTACGACTAAGGACGGCG+GGG | - | chr6.3:23241741-23241760 | None:intergenic | 65.0% | |
| CCTACGACTAAGGACGGCGG+GGG | - | chr6.3:23241740-23241759 | None:intergenic | 65.0% | |
| CGAGAGCTGCACGCAATCGG+CGG | - | chr6.3:23238984-23239003 | None:intergenic | 65.0% | |
| GACTAAGGACGGCGGGGGTT+GGG | - | chr6.3:23241735-23241754 | None:intergenic | 65.0% | |
| GGGCGAGAGCTGCACGCAAT+CGG | - | chr6.3:23238987-23239006 | None:intergenic | 65.0% | |
| GGTTGGGAACGGTGCAGGCT+GGG | - | chr6.3:23241719-23241738 | None:intergenic | 65.0% | |
| GTTGGGAACGGTGCAGGCTG+GGG | - | chr6.3:23241718-23241737 | None:intergenic | 65.0% | |
| AGGACGGCGGGGGTTGGGAA+CGG | - | chr6.3:23241730-23241749 | None:intergenic | 70.0% | |
| CCCCCGCCGTCCTTAGTCGT+AGG | + | chr6.3:23241737-23241756 | MS.gene74676:intron | 70.0% | |
| CGACTAAGGACGGCGGGGGT+TGG | - | chr6.3:23241736-23241755 | None:intergenic | 70.0% | |
| GCACGCAATCGGCGGCTCTC+TGG | - | chr6.3:23238976-23238995 | None:intergenic | 70.0% | |
| GCGAGGTGCACCGCCAGAGT+TGG | + | chr6.3:23239849-23239868 | MS.gene74676:intron | 70.0% | |
| GGGTTGGGAACGGTGCAGGC+TGG | - | chr6.3:23241720-23241739 | None:intergenic | 70.0% | |
| GCGGGGGTTGGGAACGGTGC+AGG | - | chr6.3:23241724-23241743 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 23238207 | 23244361 | 23238207 | ID=MS.gene74676 |
| chr6.3 | mRNA | 23238207 | 23244361 | 23238207 | ID=MS.gene74676.t1;Parent=MS.gene74676 |
| chr6.3 | exon | 23238207 | 23238296 | 23238207 | ID=MS.gene74676.t1.exon1;Parent=MS.gene74676.t1 |
| chr6.3 | CDS | 23238207 | 23238296 | 23238207 | ID=cds.MS.gene74676.t1;Parent=MS.gene74676.t1 |
| chr6.3 | exon | 23238925 | 23239079 | 23238925 | ID=MS.gene74676.t1.exon2;Parent=MS.gene74676.t1 |
| chr6.3 | CDS | 23238925 | 23239079 | 23238925 | ID=cds.MS.gene74676.t1;Parent=MS.gene74676.t1 |
| chr6.3 | exon | 23239200 | 23239297 | 23239200 | ID=MS.gene74676.t1.exon3;Parent=MS.gene74676.t1 |
| chr6.3 | CDS | 23239200 | 23239297 | 23239200 | ID=cds.MS.gene74676.t1;Parent=MS.gene74676.t1 |
| chr6.3 | exon | 23239436 | 23239544 | 23239436 | ID=MS.gene74676.t1.exon4;Parent=MS.gene74676.t1 |
| chr6.3 | CDS | 23239436 | 23239544 | 23239436 | ID=cds.MS.gene74676.t1;Parent=MS.gene74676.t1 |
| chr6.3 | exon | 23241913 | 23242070 | 23241913 | ID=MS.gene74676.t1.exon5;Parent=MS.gene74676.t1 |
| chr6.3 | CDS | 23241913 | 23242070 | 23241913 | ID=cds.MS.gene74676.t1;Parent=MS.gene74676.t1 |
| chr6.3 | exon | 23242893 | 23243035 | 23242893 | ID=MS.gene74676.t1.exon6;Parent=MS.gene74676.t1 |
| chr6.3 | CDS | 23242893 | 23243035 | 23242893 | ID=cds.MS.gene74676.t1;Parent=MS.gene74676.t1 |
| chr6.3 | exon | 23243384 | 23243524 | 23243384 | ID=MS.gene74676.t1.exon7;Parent=MS.gene74676.t1 |
| chr6.3 | CDS | 23243384 | 23243524 | 23243384 | ID=cds.MS.gene74676.t1;Parent=MS.gene74676.t1 |
| chr6.3 | exon | 23244230 | 23244361 | 23244230 | ID=MS.gene74676.t1.exon8;Parent=MS.gene74676.t1 |
| chr6.3 | CDS | 23244230 | 23244361 | 23244230 | ID=cds.MS.gene74676.t1;Parent=MS.gene74676.t1 |
| Gene Sequence |
| Protein sequence |
