AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene002926

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002926.t1 MTR_2g022950 99.501 401 2 0 1 401 1 401 0.0 822
MS.gene002926.t1 MTR_4g131970 78.649 370 61 12 41 401 51 411 0.0 552
MS.gene002926.t1 MTR_2g022950 99.180 244 2 0 1 244 1 244 0.0 504
MS.gene002926.t1 MTR_2g022950 99.180 244 2 0 1 244 1 244 1.48e-180 503
MS.gene002926.t1 MTR_1g020080 52.696 408 159 9 9 393 27 423 9.28e-129 377
MS.gene002926.t1 MTR_3g101370 57.143 336 138 4 54 389 87 416 1.64e-127 374
MS.gene002926.t1 MTR_2g097960 55.080 374 123 6 51 393 6 365 2.73e-127 374
MS.gene002926.t1 MTR_4g086600 59.211 304 105 4 57 342 113 415 8.99e-125 368
MS.gene002926.t1 MTR_1g020080 52.330 279 111 5 9 268 27 302 6.70e-84 258
MS.gene002926.t1 MTR_3g101370 59.524 210 83 2 54 263 87 294 6.74e-84 258
MS.gene002926.t1 MTR_3g109090 32.803 314 179 8 49 343 35 335 1.08e-41 152
MS.gene002926.t1 MTR_3g109090 22.907 227 148 4 150 370 39 244 2.48e-12 68.6
MS.gene002926.t1 MTR_3g109090 32.803 314 179 8 49 343 51 351 2.11e-41 151
MS.gene002926.t1 MTR_3g109090 22.907 227 148 4 150 370 55 260 3.11e-12 68.2
MS.gene002926.t1 MTR_4g124940 30.769 351 201 11 18 343 3 336 6.11e-38 141
MS.gene002926.t1 MTR_8g022050 30.275 327 193 11 28 335 35 345 1.94e-33 129
MS.gene002926.t1 MTR_4g085540 29.658 263 158 8 61 318 35 275 1.21e-28 118
MS.gene002926.t1 MTR_4g085540 26.056 284 198 8 62 340 124 400 2.15e-26 111
MS.gene002926.t1 MTR_1g019150 28.897 263 160 9 61 318 33 273 1.67e-25 108
MS.gene002926.t1 MTR_1g019150 25.564 266 185 9 62 321 122 380 5.74e-20 92.4
MS.gene002926.t1 MTR_7g102730 24.585 301 182 9 49 338 5 271 8.92e-25 107
MS.gene002926.t1 MTR_7g102730 25.352 284 194 8 62 337 100 373 2.31e-19 90.5
MS.gene002926.t1 MTR_3g102040 28.517 263 161 8 61 318 25 265 5.72e-24 104
MS.gene002926.t1 MTR_3g102040 26.277 274 178 8 62 324 114 374 2.21e-20 93.6
MS.gene002926.t1 MTR_3g102040 29.545 176 101 5 156 326 25 182 3.48e-13 71.6
MS.gene002926.t1 MTR_1g061870 24.913 289 185 7 41 324 1 262 1.10e-22 100
MS.gene002926.t1 MTR_1g061870 24.013 304 210 9 40 338 88 375 8.03e-15 76.6
MS.gene002926.t1 MTR_1g097440 28.417 278 171 10 61 333 31 285 6.08e-22 98.6
MS.gene002926.t1 MTR_1g097440 21.914 324 225 10 24 340 95 397 2.50e-16 81.3
MS.gene002926.t1 MTR_6g040190 26.592 267 165 8 58 319 23 263 6.67e-21 95.1
MS.gene002926.t1 MTR_6g040190 22.848 302 216 7 62 357 115 405 4.79e-17 83.6
MS.gene002926.t1 MTR_1g056520 30.348 201 128 6 52 244 100 296 1.35e-20 92.0
MS.gene002926.t1 MTR_3g075500 31.285 179 114 4 62 235 111 285 3.22e-19 87.4
MS.gene002926.t1 MTR_3g075500 27.230 213 126 6 135 329 79 280 4.90e-12 66.6
MS.gene002926.t1 MTR_3g075500 32.515 163 101 4 62 219 111 269 9.20e-18 83.2
MS.gene002926.t1 MTR_7g106440 27.451 204 128 7 51 243 100 294 3.68e-16 79.3
MS.gene002926.t1 MTR_3g065190 27.957 186 126 3 51 236 16 193 6.26e-16 79.0
MS.gene002926.t1 MTR_3g065190 25.946 185 111 5 154 331 24 189 2.03e-12 68.6
MS.gene002926.t1 MTR_4g104470 28.495 186 107 4 62 235 124 295 6.60e-16 78.2
MS.gene002926.t1 MTR_4g104470 27.513 189 119 5 146 328 113 289 1.77e-12 68.2
MS.gene002926.t1 MTR_1g064230 29.688 192 115 4 62 235 86 275 7.12e-16 77.8
MS.gene002926.t1 MTR_1g064230 30.052 193 115 6 153 329 82 270 1.49e-13 70.9
MS.gene002926.t1 MTR_6g040070 20.132 303 226 8 62 357 17 310 9.74e-15 76.6
MS.gene002926.t1 MTR_3g448370 26.087 253 142 9 153 390 196 418 3.87e-14 74.7
MS.gene002926.t1 MTR_3g448370 26.087 253 142 9 153 390 91 313 3.91e-14 74.7
MS.gene002926.t1 MTR_3g448370 26.087 253 142 9 153 390 207 429 4.49e-14 74.7
MS.gene002926.t1 MTR_3g448370 26.087 253 142 9 153 390 193 415 4.54e-14 74.7
MS.gene002926.t1 MTR_3g448370 26.087 253 142 9 153 390 196 418 5.15e-14 74.3
MS.gene002926.t1 MTR_3g098620 25.962 208 124 6 141 347 263 441 1.35e-13 73.2
MS.gene002926.t1 MTR_3g098620 25.962 208 124 6 141 347 263 441 1.38e-13 73.2
MS.gene002926.t1 MTR_3g098620 25.962 208 124 6 141 347 263 441 1.65e-13 72.8
MS.gene002926.t1 MTR_7g104800 21.053 285 187 8 62 339 103 356 2.39e-13 71.6
MS.gene002926.t1 MTR_8g076100 22.297 296 193 8 62 347 420 688 3.50e-13 72.0
MS.gene002926.t1 MTR_7g118120 21.528 288 184 10 62 338 106 362 3.70e-13 71.2
MS.gene002926.t1 MTR_8g076100 22.297 296 193 8 62 347 420 688 5.46e-13 71.2
MS.gene002926.t1 MTR_8g076100 22.297 296 193 8 62 347 420 688 7.99e-13 70.9
MS.gene002926.t1 MTR_1g045510 26.667 195 118 4 51 235 104 283 8.92e-13 68.6
MS.gene002926.t1 MTR_7g010360 22.330 309 188 10 83 370 373 650 2.58e-12 68.9
MS.gene002926.t1 MTR_8g007390 23.420 269 172 10 62 322 217 459 3.64e-12 68.6
MS.gene002926.t1 MTR_8g007390 23.420 269 172 10 62 322 216 458 4.12e-12 68.6
MS.gene002926.t1 MTR_2g049640 25.967 181 112 5 153 332 194 353 5.04e-12 68.2
MS.gene002926.t1 MTR_1g080150 39.474 76 45 1 154 229 131 205 1.63e-11 64.3
MS.gene002926.t1 MTR_1g115375 27.136 199 137 5 57 253 217 409 3.21e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002926.t1 AT1G11650 65.205 342 103 6 38 377 39 366 2.21e-156 447
MS.gene002926.t1 AT5G54900 64.759 332 102 7 51 378 51 371 9.06e-145 417
MS.gene002926.t1 AT4G27000 64.205 352 106 5 38 376 45 389 3.12e-144 416
MS.gene002926.t1 AT1G11650 67.159 271 84 3 38 306 39 306 1.78e-132 382
MS.gene002926.t1 AT3G19130 58.710 310 110 5 55 348 103 410 8.56e-122 360
MS.gene002926.t1 AT1G49600 55.132 341 127 6 50 379 109 434 1.13e-120 357
MS.gene002926.t1 AT1G49600 58.140 301 116 3 50 342 109 407 6.30e-119 353
MS.gene002926.t1 AT1G49600 58.140 301 116 3 50 342 109 407 6.30e-119 353
MS.gene002926.t1 AT1G47490 50.758 396 177 8 4 394 48 430 9.87e-118 349
MS.gene002926.t1 AT5G19350 53.279 366 135 8 48 393 8 357 1.73e-117 348
MS.gene002926.t1 AT5G19350 52.128 376 137 8 48 399 8 364 7.56e-117 347
MS.gene002926.t1 AT1G47500 53.782 357 146 8 45 394 88 432 2.24e-115 343
MS.gene002926.t1 AT1G47490 50.746 268 119 6 4 265 48 308 5.45e-77 241
MS.gene002926.t1 AT1G47490 25.758 198 124 5 141 328 87 271 1.46e-12 68.6
MS.gene002926.t1 AT1G47500 54.867 226 92 5 45 264 88 309 1.80e-73 232
MS.gene002926.t1 AT1G47500 26.786 224 138 7 141 354 89 296 5.44e-12 66.6
MS.gene002926.t1 AT1G54080 32.432 333 190 11 22 335 30 346 5.51e-40 147
MS.gene002926.t1 AT1G54080 32.047 337 190 12 22 335 30 350 3.28e-38 143
MS.gene002926.t1 AT1G17370 30.556 324 193 10 28 335 27 334 2.91e-35 134
MS.gene002926.t1 AT3G14100 30.887 327 191 11 28 335 32 342 1.00e-34 133
MS.gene002926.t1 AT1G17370 30.275 327 193 11 28 335 27 337 2.48e-34 132
MS.gene002926.t1 AT4G34110 27.018 285 181 7 61 340 37 299 9.63e-28 115
MS.gene002926.t1 AT4G34110 25.704 284 199 8 62 340 126 402 5.11e-25 107
MS.gene002926.t1 AT2G23350 27.875 287 195 8 59 340 133 412 1.88e-27 115
MS.gene002926.t1 AT2G23350 28.137 263 162 8 61 318 47 287 6.84e-24 104
MS.gene002926.t1 AT1G22760 28.446 341 202 13 7 340 8 313 1.45e-25 109
MS.gene002926.t1 AT1G22760 22.997 287 205 9 62 340 138 416 7.21e-19 89.4
MS.gene002926.t1 AT1G49760 26.667 285 182 7 61 340 46 308 7.27e-25 107
MS.gene002926.t1 AT1G49760 27.612 268 182 7 59 321 132 392 3.49e-22 99.4
MS.gene002926.t1 AT1G49760 27.228 202 121 6 51 235 213 405 7.40e-14 73.9
MS.gene002926.t1 AT1G49760 26.667 285 182 7 61 340 46 308 7.27e-25 107
MS.gene002926.t1 AT1G49760 27.612 268 182 7 59 321 132 392 3.49e-22 99.4
MS.gene002926.t1 AT1G49760 27.228 202 121 6 51 235 213 405 7.40e-14 73.9
MS.gene002926.t1 AT1G71770 26.316 285 184 8 61 340 60 323 4.43e-24 105
MS.gene002926.t1 AT1G71770 24.390 287 201 9 62 340 148 426 2.32e-21 96.7
MS.gene002926.t1 AT1G71770 26.316 285 184 8 61 340 60 323 4.43e-24 105
MS.gene002926.t1 AT1G71770 24.390 287 201 9 62 340 148 426 2.32e-21 96.7
MS.gene002926.t1 AT2G36660 26.224 286 180 10 61 341 25 284 1.09e-23 103
MS.gene002926.t1 AT2G36660 22.977 309 213 11 40 340 97 388 6.30e-14 73.9
MS.gene002926.t1 AT3G16380 27.491 291 187 10 62 341 114 391 2.52e-21 96.3
MS.gene002926.t1 AT3G16380 26.568 271 174 7 61 326 22 272 2.28e-19 90.5
MS.gene002926.t1 AT1G34140 24.101 278 195 8 62 333 33 300 4.45e-18 85.9
MS.gene002926.t1 AT3G52380 28.079 203 130 6 54 245 111 308 2.65e-17 82.8
MS.gene002926.t1 AT5G50250 31.053 190 118 5 48 235 108 286 9.13e-17 80.5
MS.gene002926.t1 AT4G24770 30.435 184 110 4 62 237 152 325 1.20e-16 80.9
MS.gene002926.t1 AT4G24770 26.289 194 125 4 141 328 136 317 2.65e-11 64.7
MS.gene002926.t1 AT4G24770 30.435 184 110 4 62 237 152 325 1.20e-16 80.9
MS.gene002926.t1 AT4G24770 26.289 194 125 4 141 328 136 317 2.65e-11 64.7
MS.gene002926.t1 AT2G37220 29.439 214 126 5 44 237 77 285 1.32e-14 74.3
MS.gene002926.t1 AT2G37220 28.947 190 120 5 154 329 90 278 9.73e-13 68.6
MS.gene002926.t1 AT2G18510 26.882 186 128 3 51 236 16 193 1.63e-14 74.7
MS.gene002926.t1 AT2G44710 24.908 273 163 11 62 322 216 458 1.11e-13 73.6
MS.gene002926.t1 AT2G44710 24.908 273 163 11 62 322 216 458 1.11e-13 73.6
MS.gene002926.t1 AT4G13850 41.772 79 45 1 157 235 37 114 1.12e-13 68.2
MS.gene002926.t1 AT2G44710 25.275 273 162 11 62 322 131 373 1.38e-13 73.2
MS.gene002926.t1 AT3G13224 28.643 199 135 4 59 257 9 200 1.81e-13 71.6
MS.gene002926.t1 AT3G13224 24.121 199 128 6 157 349 12 193 2.44e-11 65.1
MS.gene002926.t1 AT4G13850 43.373 83 45 2 157 239 37 117 1.91e-13 67.8
MS.gene002926.t1 AT4G13850 43.373 83 45 2 157 239 37 117 2.33e-13 67.8
MS.gene002926.t1 AT4G13850 43.373 83 45 2 157 239 37 117 2.60e-13 67.8
MS.gene002926.t1 AT4G14300 30.508 177 109 5 157 324 8 179 3.38e-13 71.2
MS.gene002926.t1 AT4G14300 30.508 177 109 5 157 324 8 179 3.38e-13 71.2
MS.gene002926.t1 AT1G60000 29.545 176 116 4 62 235 87 256 3.56e-13 69.7
MS.gene002926.t1 AT3G13224 28.571 196 133 4 62 257 21 209 7.84e-13 69.7
MS.gene002926.t1 AT3G13224 24.121 199 128 6 157 349 21 202 1.45e-11 65.9
MS.gene002926.t1 AT2G33410 31.613 155 96 2 62 207 8 161 3.27e-12 68.2
MS.gene002926.t1 AT2G42890 26.866 201 111 6 141 332 169 342 6.54e-12 67.8
MS.gene002926.t1 AT2G42890 26.866 201 111 6 141 332 169 342 6.54e-12 67.8
MS.gene002926.t1 AT2G42890 26.866 201 111 6 141 332 182 355 6.58e-12 67.8
MS.gene002926.t1 AT5G47620 28.477 151 102 3 62 207 8 157 6.68e-12 67.4
MS.gene002926.t1 AT5G47620 28.477 151 102 3 62 207 8 157 6.68e-12 67.4
MS.gene002926.t1 AT5G47620 28.477 151 102 3 62 207 8 157 6.68e-12 67.4
MS.gene002926.t1 AT5G40490 24.378 201 144 4 50 250 32 224 7.27e-12 67.0
MS.gene002926.t1 AT3G04500 39.474 76 45 1 154 229 136 210 7.83e-12 65.5
MS.gene002926.t1 AT4G00830 20.608 296 200 9 62 351 118 384 1.48e-11 66.2
MS.gene002926.t1 AT4G00830 20.608 296 200 9 62 351 118 384 1.48e-11 66.2
MS.gene002926.t1 AT4G00830 20.608 296 200 9 62 351 118 384 1.48e-11 66.2
MS.gene002926.t1 AT1G58470 25.683 183 112 6 151 314 2 179 1.98e-11 65.5
MS.gene002926.t1 AT1G58470 25.683 183 112 6 151 314 2 179 1.98e-11 65.5
MS.gene002926.t1 AT1G48920 26.230 183 113 5 46 210 281 459 3.66e-11 65.1
MS.gene002926.t1 AT3G52150 26.923 182 114 6 157 328 78 250 3.82e-11 63.5
MS.gene002926.t1 AT3G52150 26.923 182 114 6 157 328 78 250 3.82e-11 63.5
MS.gene002926.t1 AT4G00830 20.270 296 201 9 62 351 118 384 4.85e-11 64.7
MS.gene002926.t1 AT3G52660 19.932 296 194 7 62 345 94 358 6.92e-11 64.3
MS.gene002926.t1 AT3G52660 19.932 296 194 7 62 345 94 358 6.92e-11 64.3
MS.gene002926.t1 AT3G52660 19.932 296 194 7 62 345 94 358 6.92e-11 64.3
MS.gene002926.t1 AT2G16940 29.412 187 110 8 155 329 182 358 7.88e-11 64.3
MS.gene002926.t1 AT2G16940 29.412 187 110 8 155 329 41 217 8.71e-11 63.5
MS.gene002926.t1 AT2G16940 29.412 187 110 8 155 329 41 217 8.71e-11 63.5
MS.gene002926.t1 AT2G16940 29.412 187 110 8 155 329 231 407 9.16e-11 63.9

Find 145 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATTACCTGTCCGAAAAT+TGG 0.249363 2.1:+65441677 None:intergenic
AGTACGCACAGTTGTGTTAT+TGG 0.270672 2.1:+65441880 None:intergenic
CTGAGGAGGCTGAGCGGATT+GGG 0.307940 2.1:+65445401 None:intergenic
GTTGTGATTGATAGGCTTAC+TGG 0.319710 2.1:-65444016 MS.gene002926:CDS
GACAAAATGTTCGCCTTTCA+TGG 0.326353 2.1:-65441511 MS.gene002926:CDS
CATGTACTAGTTCACCATAT+TGG 0.331562 2.1:+65441734 None:intergenic
TTCGGCTGAGTGGTGGCAGC+CGG 0.333982 2.1:+65443866 None:intergenic
CAGGGTGGTTATGAGAATTA+TGG 0.335183 2.1:-65441313 MS.gene002926:CDS
TAGGCTTACTGGTAGGTCTA+AGG 0.336332 2.1:-65444005 MS.gene002926:CDS
GTCAGAATTACAGATTGAAT+TGG 0.341841 2.1:-65444186 MS.gene002926:CDS
CTGACCACCATTCGGCATAA+TGG 0.348543 2.1:+65444204 None:intergenic
ACTGGTAGGTCTAAGGGATA+TGG 0.353776 2.1:-65443998 MS.gene002926:CDS
TATATTACCTGTTTGTTTGA+AGG 0.362349 2.1:+65441479 None:intergenic
CGCTGCTCCTCCTGCTGGAC+AGG 0.368738 2.1:-65441287 MS.gene002926:CDS
ATGTACTAGTTCACCATATT+GGG 0.373760 2.1:+65441735 None:intergenic
GCTGAGGAGGCTGAGCGGAT+TGG 0.376833 2.1:+65445400 None:intergenic
GTACGCACAGTTGTGTTATT+GGG 0.383024 2.1:+65441881 None:intergenic
AGATGATCGTCGGTGACATT+TGG 0.384630 2.1:+65441772 None:intergenic
CCTGCTGCTGGTGGATATTA+CGG 0.389047 2.1:-65441343 MS.gene002926:CDS
CAATGTGTATGGAAGTTATC+CGG 0.390591 2.1:-65441260 MS.gene002926:CDS
ACAGCAGCAACAACAGCAAA+TGG 0.403314 2.1:-65441215 MS.gene002926:CDS
GGGCGAAAGTTGTGATTGAT+AGG 0.409258 2.1:-65444024 MS.gene002926:CDS
TCAGCGCTGGCGGGCTGCTG+AGG 0.435204 2.1:+65445384 None:intergenic
GTTGTTGCTGCTGTGGGTGT+TGG 0.436095 2.1:+65441224 None:intergenic
TTCCATCAGGCAAGCGATGC+GGG 0.436975 2.1:-65441705 MS.gene002926:CDS
ACTAGTCAATCAGAAGGTTA+TGG 0.441162 2.1:-65444286 MS.gene002926:CDS
TTCTCGCTTTGTCCGCCACT+AGG 0.442395 2.1:+65441908 None:intergenic
GGTATTGTTGCGGTGGTTGT+TGG 0.444138 2.1:+65445490 None:intergenic
GGTTACGCTGCTCCTCCTGC+TGG 0.445011 2.1:-65441292 MS.gene002926:CDS
GGAGGAGCCATGCCGTGTCC+TGG 0.452151 2.1:+65445522 None:intergenic
GGAAGTTATCCGGGGTATCC+TGG 0.454317 2.1:-65441250 MS.gene002926:CDS
TCAGAATTACAGATTGAATT+GGG 0.455422 2.1:-65444185 MS.gene002926:CDS
GATTGGGCCGCCCACATAGC+TGG 0.455583 2.1:+65445417 None:intergenic
CCGTAATATCCACCAGCAGC+AGG 0.455987 2.1:+65441343 None:intergenic
CTGATGAGGTCCGTACTCTC+TGG 0.456744 2.1:-65445365 MS.gene002926:CDS
AATTATCTATATACCTGCTT+CGG 0.457585 2.1:-65445312 MS.gene002926:CDS
ATTTGCTGTTGTTGCTGCTG+TGG 0.460723 2.1:+65441217 None:intergenic
TGCTGTGGGTGTTGGTAACC+AGG 0.462351 2.1:+65441232 None:intergenic
AACGAGCCCTAAAAGTCTCC+TGG 0.463019 2.1:+65444062 None:intergenic
CGGCATGGCTCCTCCCACCA+TGG 0.465301 2.1:-65445514 MS.gene002926:CDS
TTTGCTGTTGTTGCTGCTGT+GGG 0.468115 2.1:+65441218 None:intergenic
TGGTGAGAGGTCGTCGAGGC+AGG 0.473256 2.1:-65444149 MS.gene002926:CDS
GGATCGGTGATTTGCAGTAC+TGG 0.478598 2.1:-65445344 MS.gene002926:CDS
GCGCTGGCGGGCTGCTGAGG+AGG 0.479390 2.1:+65445387 None:intergenic
ACGCACTCCTTCAAACAAAC+AGG 0.483228 2.1:-65441486 MS.gene002926:intron
TCGGCTGAGTGGTGGCAGCC+GGG 0.484975 2.1:+65443867 None:intergenic
CAGCAGCAGGGTAACCACCC+TGG 0.488709 2.1:+65441356 None:intergenic
TCAACAAGACCCATGAGGAT+TGG 0.489460 2.1:-65443908 MS.gene002926:CDS
CAGGGTGGTTACCCTGCTGC+TGG 0.494399 2.1:-65441355 MS.gene002926:CDS
ACAAAATGTTCGCCTTTCAT+GGG 0.496313 2.1:-65441510 MS.gene002926:CDS
TGGATATTACGGCTATGCCC+AGG 0.498954 2.1:-65441332 MS.gene002926:CDS
CTGTAATTCTGACCACCATT+CGG 0.501561 2.1:+65444196 None:intergenic
CACAACAACCGCCAGCTATG+TGG 0.504918 2.1:-65445428 MS.gene002926:CDS
TTTGTGAGATTTGCTGATGA+GGG 0.506475 2.1:-65443974 MS.gene002926:CDS
GGTGGTTGTTGGCCCATGGT+GGG 0.509060 2.1:+65445501 None:intergenic
TGTTACTGATTACCTTCTCC+AGG 0.509993 2.1:-65444080 MS.gene002926:CDS
CATCAGGAGCTGTGCAGAAG+AGG 0.510016 2.1:-65441567 MS.gene002926:intron
TCTCGCTTTGTCCGCCACTA+GGG 0.510759 2.1:+65441909 None:intergenic
GCAGCCCGCCAGCGCTGATG+AGG 0.511476 2.1:-65445379 MS.gene002926:CDS
CCCTAAAAGTCTCCTGGAGA+AGG 0.518946 2.1:+65444068 None:intergenic
CTCGCCGGTGTTACCGAAGC+AGG 0.520914 2.1:+65445299 None:intergenic
GGATAACTTCCATACACATT+GGG 0.521577 2.1:+65441262 None:intergenic
AATGTGTATGGAAGTTATCC+GGG 0.521666 2.1:-65441259 MS.gene002926:CDS
CGGATAACTTCCATACACAT+TGG 0.523263 2.1:+65441261 None:intergenic
GGACAGGATCCCAATGTGTA+TGG 0.524626 2.1:-65441271 MS.gene002926:CDS
GCTGCTGTGGTGGTGGCTGT+TGG 0.525112 2.1:+65445469 None:intergenic
CGGTGGTTGTTGGCCCATGG+TGG 0.525587 2.1:+65445500 None:intergenic
GCTCGTTATAACTCTGTGAA+GGG 0.526741 2.1:-65444046 MS.gene002926:CDS
TTGCGGTGGTTGTTGGCCCA+TGG 0.528216 2.1:+65445497 None:intergenic
GGTGGTTACCCTGCTGCTGG+TGG 0.530682 2.1:-65441352 MS.gene002926:CDS
AATTGGGCAACTTTCAGTGC+TGG 0.533382 2.1:-65444169 MS.gene002926:CDS
AACCCGCATCGCTTGCCTGA+TGG 0.535712 2.1:+65441703 None:intergenic
CAGCAGCAACAACAGCAAAT+GGG 0.536514 2.1:-65441214 MS.gene002926:CDS
AGGCTTACTGGTAGGTCTAA+GGG 0.537077 2.1:-65444004 MS.gene002926:CDS
AGCAGCAGGGTAACCACCCT+GGG 0.537307 2.1:+65441357 None:intergenic
CACATAGCTGGCGGTTGTTG+TGG 0.538231 2.1:+65445429 None:intergenic
GTACATGTGAAGATTCCATC+AGG 0.542172 2.1:-65441718 MS.gene002926:CDS
AAGGAGTGCGTCCCCATGAA+AGG 0.543141 2.1:+65441498 None:intergenic
ACGGACCTCATCAGCGCTGG+CGG 0.545644 2.1:+65445374 None:intergenic
AGGTCGTCGAGGCAGGATGA+TGG 0.546691 2.1:-65444142 MS.gene002926:CDS
GGCTCGTTATAACTCTGTGA+AGG 0.546701 2.1:-65444047 MS.gene002926:CDS
GGTTGTTGGCCCATGGTGGG+AGG 0.549182 2.1:+65445504 None:intergenic
CGGACCTCATCAGCGCTGGC+GGG 0.550273 2.1:+65445375 None:intergenic
ACGTACGGCTGCTGTGGTGG+TGG 0.551079 2.1:+65445462 None:intergenic
ACATTGGGATCCTGTCCAGC+AGG 0.553089 2.1:+65441277 None:intergenic
AGTGGCAGGTCCAATCCTCA+TGG 0.559052 2.1:+65443898 None:intergenic
GGCATGGCTCCTCCCACCAT+GGG 0.562530 2.1:-65445513 MS.gene002926:CDS
GCAGGGTAACCACCCTGGGT+TGG 0.563661 2.1:+65441361 None:intergenic
CGTAATATCCACCAGCAGCA+GGG 0.575605 2.1:+65441344 None:intergenic
TTGAACGGAACTTTATTGGG+TGG 0.575973 2.1:-65441533 MS.gene002926:CDS
CGGTGATTTGCAGTACTGGA+TGG 0.577072 2.1:-65445340 MS.gene002926:CDS
ACAACAACCGCCAGCTATGT+GGG 0.578681 2.1:-65445427 MS.gene002926:CDS
GGGCTATGACTGAGATGCAA+GGG 0.579569 2.1:-65443940 MS.gene002926:CDS
AATCACCGATCCAGAGAGTA+CGG 0.579736 2.1:+65445355 None:intergenic
CCGAGAGAGATGATGCAACC+AGG 0.585288 2.1:-65445540 None:intergenic
AACTTGCCTCAGATGATCGT+CGG 0.588898 2.1:+65441762 None:intergenic
ATAATTCTCATAACCACCCT+GGG 0.588906 2.1:+65441315 None:intergenic
GGCTGTTGGTATTGTTGCGG+TGG 0.589555 2.1:+65445483 None:intergenic
TGATTGATAGGCTTACTGGT+AGG 0.591076 2.1:-65444012 MS.gene002926:CDS
CAACTTTCAGTGCTGGTGAG+AGG 0.591642 2.1:-65444162 MS.gene002926:CDS
CTCGTTATAACTCTGTGAAG+GGG 0.593138 2.1:-65444045 MS.gene002926:CDS
GGTGGCTGTTGGTATTGTTG+CGG 0.594122 2.1:+65445480 None:intergenic
AGTACGGACCTCATCAGCGC+TGG 0.598621 2.1:+65445371 None:intergenic
ATAACGTACGGCTGCTGTGG+TGG 0.602070 2.1:+65445459 None:intergenic
ATCATAACGTACGGCTGCTG+TGG 0.608287 2.1:+65445456 None:intergenic
CATAATTCTCATAACCACCC+TGG 0.609101 2.1:+65441314 None:intergenic
AAGCAAACTAGTCAATCAGA+AGG 0.612741 2.1:-65444292 MS.gene002926:CDS
AGAGTGCTTCTGACATACAA+TGG 0.615716 2.1:-65444229 MS.gene002926:CDS
GAGGTCCGTACTCTCTGGAT+CGG 0.617179 2.1:-65445360 MS.gene002926:CDS
GGATATTACGGCTATGCCCA+GGG 0.617872 2.1:-65441331 MS.gene002926:CDS
GCTGCCACCACTCAGCCGAA+AGG 0.617922 2.1:-65443863 MS.gene002926:intron
GTGGCAGGTCCAATCCTCAT+GGG 0.618279 2.1:+65443899 None:intergenic
ATAGCTGGCGGTTGTTGTGG+TGG 0.618727 2.1:+65445432 None:intergenic
CTGATGAGGGTGAACAGATG+AGG 0.619017 2.1:-65443961 MS.gene002926:CDS
CAAAATGTTCGCCTTTCATG+GGG 0.619064 2.1:-65441509 MS.gene002926:CDS
TCGTTATAACTCTGTGAAGG+GGG 0.622931 2.1:-65444044 MS.gene002926:CDS
CAAACCTTTCGGCTGAGTGG+TGG 0.624684 2.1:+65443859 None:intergenic
AGACAAACCTTTCGGCTGAG+TGG 0.627415 2.1:+65443856 None:intergenic
AGGGCTATGACTGAGATGCA+AGG 0.628733 2.1:-65443941 MS.gene002926:CDS
GAGATGATGCAACCAGGACA+CGG 0.629747 2.1:-65445534 MS.gene002926:CDS
AGAAAGATATTATACCTCGC+CGG 0.630596 2.1:+65445284 None:intergenic
ATGTCACCGACGATCATCTG+AGG 0.632855 2.1:-65441768 MS.gene002926:CDS
AATGGAACCATTATGCCGAA+TGG 0.635772 2.1:-65444211 MS.gene002926:CDS
TATACCTGCTTCGGTAACAC+CGG 0.640046 2.1:-65445303 MS.gene002926:CDS
GATGCAACCAGGACACGGCA+TGG 0.642660 2.1:-65445529 MS.gene002926:CDS
GGGCTGCTGAGGAGGCTGAG+CGG 0.642669 2.1:+65445395 None:intergenic
TTGGGATCCTGTCCAGCAGG+AGG 0.643700 2.1:+65441280 None:intergenic
GGAACCATTATGCCGAATGG+TGG 0.645643 2.1:-65444208 MS.gene002926:CDS
ATTCCATCAGGCAAGCGATG+CGG 0.646516 2.1:-65441706 MS.gene002926:CDS
GACTCAACAAGATCCAACCC+AGG 0.647131 2.1:-65441374 MS.gene002926:CDS
TGGGCCGCCCACATAGCTGG+CGG 0.657827 2.1:+65445420 None:intergenic
TGATGAGGGTGAACAGATGA+GGG 0.661600 2.1:-65443960 MS.gene002926:CDS
GGCTATGACTGAGATGCAAG+GGG 0.668121 2.1:-65443939 MS.gene002926:CDS
TGTGGTGGCATCATAACGTA+CGG 0.676809 2.1:+65445447 None:intergenic
TGTTGGTAACCAGGATACCC+CGG 0.677241 2.1:+65441241 None:intergenic
ACAACCGCCAGCTATGTGGG+CGG 0.687665 2.1:-65445424 MS.gene002926:CDS
GTGCTGGTGAGAGGTCGTCG+AGG 0.694460 2.1:-65444153 MS.gene002926:CDS
TTTGTTCAACAAGACCCATG+AGG 0.696574 2.1:-65443913 MS.gene002926:CDS
ACTCAACAAGATCCAACCCA+GGG 0.701733 2.1:-65441373 MS.gene002926:CDS
GCAGCTTCGTATAACCCTAG+TGG 0.702417 2.1:-65441923 MS.gene002926:intron
GCTTCGTATAACCCTAGTGG+CGG 0.705338 2.1:-65441920 MS.gene002926:CDS
ATGTGTATGGAAGTTATCCG+GGG 0.708244 2.1:-65441258 MS.gene002926:CDS
CAACAAGATCCAACCCAGGG+TGG 0.719050 2.1:-65441370 MS.gene002926:CDS
CTGCTTCGGTAACACCGGCG+AGG 0.749783 2.1:-65445298 MS.gene002926:intron
TATTACGGCTATGCCCAGGG+TGG 0.766971 2.1:-65441328 MS.gene002926:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATTTTAATTTATAT+TGG - chr2.1:65444470-65444489 MS.gene002926:intron 0.0%
!!! AATTTTCCTTTAAAAAAATT+GGG - chr2.1:65443135-65443154 MS.gene002926:intron 10.0%
!!! ATTTTTTATTGATTGATTAT+TGG - chr2.1:65441537-65441556 MS.gene002926:CDS 10.0%
!!! TAATTGTTTTTACTTTTTAA+AGG - chr2.1:65443787-65443806 MS.gene002926:intron 10.0%
!! ACTATTTATTTAATAACCAA+AGG + chr2.1:65444703-65444722 None:intergenic 15.0%
!!! AAATTGGATTTTGTAATTTT+GGG - chr2.1:65441847-65441866 MS.gene002926:intron 15.0%
!!! AGTGTTATTTTTTTATTTGA+TGG - chr2.1:65444544-65444563 MS.gene002926:intron 15.0%
!!! ATCCAATAATTTTTAAGTAA+AGG - chr2.1:65444086-65444105 MS.gene002926:CDS 15.0%
!!! CAATTTTCCTTTAAAAAAAT+TGG - chr2.1:65443134-65443153 MS.gene002926:intron 15.0%
!!! TGTATTGAATTTGATTTATA+TGG - chr2.1:65444437-65444456 MS.gene002926:intron 15.0%
!! AAATATATGAGAAGAATAAG+AGG + chr2.1:65443660-65443679 None:intergenic 20.0%
!! ATTATTCTGTTAGTGAAATT+TGG - chr2.1:65442371-65442390 MS.gene002926:intron 20.0%
!! GTCCTTTACTTAAAAATTAT+TGG + chr2.1:65444091-65444110 None:intergenic 20.0%
!! TGAAATAAATAAACATTTGC+TGG + chr2.1:65443585-65443604 None:intergenic 20.0%
!! TTAAATTGATAGAAGAGTAA+AGG - chr2.1:65444167-65444186 MS.gene002926:CDS 20.0%
!! TTATCCTATTTGTGAAATTA+GGG - chr2.1:65441785-65441804 MS.gene002926:CDS 20.0%
!! TTATTCTGTTAGTGAAATTT+GGG - chr2.1:65442372-65442391 MS.gene002926:intron 20.0%
!! TTTATCCTATTTGTGAAATT+AGG - chr2.1:65441784-65441803 MS.gene002926:CDS 20.0%
!!! AAATTAGGGTGTTTTAATTT+TGG - chr2.1:65441702-65441721 MS.gene002926:CDS 20.0%
!!! AAATTTGGGTTTTGAAATTT+TGG - chr2.1:65442333-65442352 MS.gene002926:intron 20.0%
!!! AACATTTTTTTTCTTATGGA+CGG + chr2.1:65443620-65443639 None:intergenic 20.0%
!!! AGCTGTTTTTAAAACTATAT+CGG - chr2.1:65442083-65442102 MS.gene002926:intron 20.0%
!!! ATTTAGCCCAATTTTTTTAA+AGG + chr2.1:65443144-65443163 None:intergenic 20.0%
!!! ATTTCATTGTAGATTTTTGT+TGG - chr2.1:65444930-65444949 MS.gene002926:intron 20.0%
!!! GAAATTAGGGTTTTTAATTT+TGG - chr2.1:65441750-65441769 MS.gene002926:CDS 20.0%
!!! GAAATTGGATTTTGTAATTT+TGG - chr2.1:65441846-65441865 MS.gene002926:intron 20.0%
!!! GTTTAAGTTATGATTCTTTT+CGG - chr2.1:65443069-65443088 MS.gene002926:intron 20.0%
!!! TCTCAACATTTTTTTTCTTA+TGG + chr2.1:65443624-65443643 None:intergenic 20.0%
!!! TCTTTCATTATTCTAAAACA+GGG + chr2.1:65444237-65444256 None:intergenic 20.0%
!!! TTATTCTGTTTTTGAAAGTA+GGG - chr2.1:65442270-65442289 MS.gene002926:intron 20.0%
!!! TTATTTTGTTAGTGAAATCA+GGG - chr2.1:65441881-65441900 MS.gene002926:intron 20.0%
!!! TTTATTCTGTTTTTGAAAGT+AGG - chr2.1:65442269-65442288 MS.gene002926:intron 20.0%
!!! TTTATTTTGTTAGTGAAATC+AGG - chr2.1:65441880-65441899 MS.gene002926:intron 20.0%
!!! TTTTTTTAAAGGAAAATTGC+AGG + chr2.1:65443133-65443152 None:intergenic 20.0%
!!! TTTTTTTATTTGATGGTTTC+CGG - chr2.1:65444551-65444570 MS.gene002926:intron 20.0%
! AAAACCCTAATTTCACAAAT+AGG + chr2.1:65441792-65441811 None:intergenic 25.0%
! AAAATGCCGCAAAAATATAA+CGG + chr2.1:65443329-65443348 None:intergenic 25.0%
! AACCAATAGGAGTAAATTAA+AGG + chr2.1:65443471-65443490 None:intergenic 25.0%
! AATGTAAATAAGATCTGCTT+TGG + chr2.1:65443542-65443561 None:intergenic 25.0%
! AATTATCTATATACCTGCTT+CGG - chr2.1:65441423-65441442 MS.gene002926:intron 25.0%
! AGAGTAAAAACTAAACCAAA+AGG + chr2.1:65443388-65443407 None:intergenic 25.0%
! AGGAACAAATAAGAATAAGA+GGG + chr2.1:65443690-65443709 None:intergenic 25.0%
! AGTTCTTAAGAAAAACCAAT+AGG + chr2.1:65443484-65443503 None:intergenic 25.0%
! ATACACTACAAAAGGTAATT+TGG + chr2.1:65443036-65443055 None:intergenic 25.0%
! CAAATTCAATACATAGTTGT+CGG + chr2.1:65444430-65444449 None:intergenic 25.0%
! CTCTCTTAATTGTAGAATTA+GGG - chr2.1:65441474-65441493 MS.gene002926:intron 25.0%
! TAAAACACCCTAATTTCTTA+AGG + chr2.1:65441698-65441717 None:intergenic 25.0%
! TATATAAGAGACAAACCTTT+CGG + chr2.1:65442890-65442909 None:intergenic 25.0%
! TATATTACCTGTTTGTTTGA+AGG + chr2.1:65445259-65445278 None:intergenic 25.0%
! TCAGAATTACAGATTGAATT+GGG - chr2.1:65442550-65442569 MS.gene002926:intron 25.0%
! TCTCTCTTAATTGTAGAATT+AGG - chr2.1:65441473-65441492 MS.gene002926:intron 25.0%
! TTATCCTGTTTGTGAAATTA+GGG - chr2.1:65441737-65441756 MS.gene002926:CDS 25.0%
! TTATGCTGTTCGTAAAATTT+GGG - chr2.1:65442319-65442338 MS.gene002926:intron 25.0%
! TTTATCCTGTTTGTGAAATT+AGG - chr2.1:65441736-65441755 MS.gene002926:CDS 25.0%
! TTTATGCTGTTCGTAAAATT+TGG - chr2.1:65442318-65442337 MS.gene002926:intron 25.0%
! TTTATTCTGCTAGTGAATTT+AGG - chr2.1:65441584-65441603 MS.gene002926:intron 25.0%
!! AGTAAAGGTATATCCAAATA+AGG - chr2.1:65444182-65444201 MS.gene002926:CDS 25.0%
!! ATGTTGGTTAGTTGAATTTA+AGG - chr2.1:65443001-65443020 MS.gene002926:intron 25.0%
!! TATTTTGTTAGTGAAATCAG+GGG - chr2.1:65441882-65441901 MS.gene002926:intron 25.0%
!! TCAAACATTTTCAGACTTAA+AGG + chr2.1:65443713-65443732 None:intergenic 25.0%
!! TGATTATTGGTGTAAGTTTT+GGG - chr2.1:65441550-65441569 MS.gene002926:CDS 25.0%
!! TTGATTATTGGTGTAAGTTT+TGG - chr2.1:65441549-65441568 MS.gene002926:CDS 25.0%
!! TTTTAGTCTGTTTGTGAAAT+TGG - chr2.1:65441831-65441850 MS.gene002926:intron 25.0%
!!! AAAGTAGGGTATTGTAATTT+TGG - chr2.1:65442284-65442303 MS.gene002926:intron 25.0%
!!! AAGTGACTAATTTGATTTTC+TGG - chr2.1:65444283-65444302 MS.gene002926:CDS 25.0%
!!! ACATTTTTTTTCTTATGGAC+GGG + chr2.1:65443619-65443638 None:intergenic 25.0%
!!! CAATTTTCACAAGCTTTTTT+TGG + chr2.1:65442127-65442146 None:intergenic 25.0%
!!! CTCTTTCATTATTCTAAAAC+AGG + chr2.1:65444238-65444257 None:intergenic 25.0%
!!! CTGTTTTAGAATAATGAAAG+AGG - chr2.1:65444236-65444255 MS.gene002926:CDS 25.0%
!!! CTTTCATTATTCTAAAACAG+GGG + chr2.1:65444236-65444255 None:intergenic 25.0%
!!! GTATTGTAATTTTGGTTTGT+AGG - chr2.1:65442292-65442311 MS.gene002926:intron 25.0%
AAAACCCTAATTTCACAAAC+AGG + chr2.1:65441744-65441763 None:intergenic 30.0%
AAAAGGTAATTTGGTACACA+AGG + chr2.1:65443027-65443046 None:intergenic 30.0%
AAAATCACAAAGTGATACAC+AGG + chr2.1:65444336-65444355 None:intergenic 30.0%
AAATGCCGCAAAAATATAAC+GGG + chr2.1:65443328-65443347 None:intergenic 30.0%
AATAAGCAGTTTATCCAAAC+AGG + chr2.1:65441960-65441979 None:intergenic 30.0%
AATATTACCTGTCCGAAAAT+TGG + chr2.1:65445061-65445080 None:intergenic 30.0%
AGATGAATTCAAACAGCTTA+TGG + chr2.1:65443831-65443850 None:intergenic 30.0%
AGTTTGATGTGATGAATTTG+TGG - chr2.1:65444365-65444384 MS.gene002926:intron 30.0%
ATGTACTAGTTCACCATATT+GGG + chr2.1:65445003-65445022 None:intergenic 30.0%
CTTACTAATATGTGTGATGT+TGG - chr2.1:65442985-65443004 MS.gene002926:intron 30.0%
GAGGAACAAATAAGAATAAG+AGG + chr2.1:65443691-65443710 None:intergenic 30.0%
GATAGAGATGATCAATTTCA+TGG - chr2.1:65443741-65443760 MS.gene002926:intron 30.0%
GGCTAACATATAACCTTATT+TGG + chr2.1:65444198-65444217 None:intergenic 30.0%
GTCAGAATTACAGATTGAAT+TGG - chr2.1:65442549-65442568 MS.gene002926:intron 30.0%
GTTTGATGTGATGAATTTGT+GGG - chr2.1:65444366-65444385 MS.gene002926:intron 30.0%
TAAATAGATAGTTGCACCTT+TGG - chr2.1:65444684-65444703 MS.gene002926:intron 30.0%
TCACAGCAAGCAAATATTTA+GGG + chr2.1:65444625-65444644 None:intergenic 30.0%
TGACAAGAACTTGAAAATGT+AGG + chr2.1:65443360-65443379 None:intergenic 30.0%
TGTATCATTCGTATGATAGA+TGG + chr2.1:65444063-65444082 None:intergenic 30.0%
TTCACAGCAAGCAAATATTT+AGG + chr2.1:65444626-65444645 None:intergenic 30.0%
! AACATTTTCAGACTTAAAGG+AGG + chr2.1:65443710-65443729 None:intergenic 30.0%
! CTCCTTTAATTTACTCCTAT+TGG - chr2.1:65443466-65443485 MS.gene002926:intron 30.0%
! GATTATTGGTGTAAGTTTTG+GGG - chr2.1:65441551-65441570 MS.gene002926:CDS 30.0%
! TGGTTTTTATCTGTGTGTAA+AGG - chr2.1:65443761-65443780 MS.gene002926:intron 30.0%
! TTTCTTTTATATGACTGCCA+TGG - chr2.1:65443977-65443996 MS.gene002926:CDS 30.0%
!!! AATTAGGGCTTTATTTTGTG+TGG - chr2.1:65441489-65441508 MS.gene002926:CDS 30.0%
!!! GAAATCAGGGGTTTTAATTT+TGG - chr2.1:65441894-65441913 MS.gene002926:CDS 30.0%
!!! GTAGGGTTTTAGATAAAGAT+GGG - chr2.1:65443908-65443927 MS.gene002926:CDS 30.0%
!!! TACCATTTTTGTTGGTGATT+TGG - chr2.1:65442625-65442644 MS.gene002926:intron 30.0%
!!! TAGGGTTTTAGATAAAGATG+GGG - chr2.1:65443909-65443928 MS.gene002926:CDS 30.0%
AAGCAAACTAGTCAATCAGA+AGG - chr2.1:65442443-65442462 MS.gene002926:intron 35.0%
AATGTGTATGGAAGTTATCC+GGG - chr2.1:65445476-65445495 MS.gene002926:CDS 35.0%
ACAAAATGTTCGCCTTTCAT+GGG - chr2.1:65445225-65445244 MS.gene002926:intron 35.0%
ACAAGTACCTCACATTGTAT+TGG + chr2.1:65444141-65444160 None:intergenic 35.0%
ACATATAACTGACCTAAGCA+AGG + chr2.1:65443296-65443315 None:intergenic 35.0%
ACCTGAGACCTTAAGAAATT+AGG - chr2.1:65441687-65441706 MS.gene002926:CDS 35.0%
ACTAGTCAATCAGAAGGTTA+TGG - chr2.1:65442449-65442468 MS.gene002926:intron 35.0%
AGAAAGATATTATACCTCGC+CGG + chr2.1:65441454-65441473 None:intergenic 35.0%
AGCCAAATCACCAACAAAAA+TGG + chr2.1:65442630-65442649 None:intergenic 35.0%
ATAATTCTCATAACCACCCT+GGG + chr2.1:65445423-65445442 None:intergenic 35.0%
ATGTTTGTTCTGCTGCATAA+TGG - chr2.1:65442937-65442956 MS.gene002926:intron 35.0%
CAAGAACTTGAAAATGTAGG+CGG + chr2.1:65443357-65443376 None:intergenic 35.0%
CAAGTACCTCACATTGTATT+GGG + chr2.1:65444140-65444159 None:intergenic 35.0%
CAATCCTAACAGATCCTATT+GGG - chr2.1:65442219-65442238 MS.gene002926:intron 35.0%
CAATGTGTATGGAAGTTATC+CGG - chr2.1:65445475-65445494 MS.gene002926:CDS 35.0%
CAGCTTATGGTATAATGCAT+AGG + chr2.1:65443818-65443837 None:intergenic 35.0%
CATGTACTAGTTCACCATAT+TGG + chr2.1:65445004-65445023 None:intergenic 35.0%
CATTCAGCATACACTACAAA+AGG + chr2.1:65443044-65443063 None:intergenic 35.0%
CCAACAAAAATGGTATGATC+AGG + chr2.1:65442620-65442639 None:intergenic 35.0%
CCTGAGACCTTAAGAAATTA+GGG - chr2.1:65441688-65441707 MS.gene002926:CDS 35.0%
CGCTCTTATCATATAAGCTA+CGG - chr2.1:65441996-65442015 MS.gene002926:intron 35.0%
GCTCTTATCATATAAGCTAC+GGG - chr2.1:65441997-65442016 MS.gene002926:intron 35.0%
GGAGTAAATTAAAGGAGCAA+AGG + chr2.1:65443463-65443482 None:intergenic 35.0%
GGATAACTTCCATACACATT+GGG + chr2.1:65445476-65445495 None:intergenic 35.0%
TAACAGATCCTATTGGGATA+AGG - chr2.1:65442225-65442244 MS.gene002926:intron 35.0%
TAACCTACCCTTGTAATTCT+GGG - chr2.1:65445280-65445299 MS.gene002926:intron 35.0%
TCAGCATGACTGATCTAAAA+GGG + chr2.1:65443884-65443903 None:intergenic 35.0%
TCCTGATGCAAGAAAAATGA+AGG + chr2.1:65445156-65445175 None:intergenic 35.0%
TGTTACAATTTGCAGAAGAC+AGG + chr2.1:65444401-65444420 None:intergenic 35.0%
TTAACCTACCCTTGTAATTC+TGG - chr2.1:65445279-65445298 MS.gene002926:intron 35.0%
TTATCCCAATAGGATCTGTT+AGG + chr2.1:65442226-65442245 None:intergenic 35.0%
TTCAGCATGACTGATCTAAA+AGG + chr2.1:65443885-65443904 None:intergenic 35.0%
! ACTGCCATGGTTTTCAAATT+GGG - chr2.1:65443990-65444009 MS.gene002926:CDS 35.0%
! ATTCACTCTGGTGCTAATTT+GGG + chr2.1:65441664-65441683 None:intergenic 35.0%
! GTAGATTTTTGTTGGCAACT+TGG - chr2.1:65444938-65444957 MS.gene002926:intron 35.0%
! TGACTTACATTTTCTTGCAC+CGG + chr2.1:65444573-65444592 None:intergenic 35.0%
! TGTTAGGATTGGCATATTTG+AGG + chr2.1:65442210-65442229 None:intergenic 35.0%
!! CCTGATCATACCATTTTTGT+TGG - chr2.1:65442617-65442636 MS.gene002926:intron 35.0%
!! GTTTGCCCGTTATATTTTTG+CGG - chr2.1:65443320-65443339 MS.gene002926:intron 35.0%
!! TTTGTGAGATTTGCTGATGA+GGG - chr2.1:65442761-65442780 MS.gene002926:intron 35.0%
!!! AGGGTTTTAGATAAAGATGG+GGG - chr2.1:65443910-65443929 MS.gene002926:CDS 35.0%
!!! CGTAGGGTTTTAGATAAAGA+TGG - chr2.1:65443907-65443926 MS.gene002926:CDS 35.0%
!!! GGGGTTTTAATTTTGGTTTG+TGG - chr2.1:65441901-65441920 MS.gene002926:CDS 35.0%
!!! TTTTGTGAGATTTGCTGATG+AGG - chr2.1:65442760-65442779 MS.gene002926:intron 35.0%
AAACCAGCCCAGAATTACAA+GGG + chr2.1:65445290-65445309 None:intergenic 40.0%
AATGGAACCATTATGCCGAA+TGG - chr2.1:65442524-65442543 MS.gene002926:intron 40.0%
ACCTGCCACTAATAAAAACC+CGG - chr2.1:65442850-65442869 MS.gene002926:intron 40.0%
AGCAAGGACATGCACTAAAA+TGG + chr2.1:65443280-65443299 None:intergenic 40.0%
AGTACGCACAGTTGTGTTAT+TGG + chr2.1:65444858-65444877 None:intergenic 40.0%
ATAAGATCTGCTTTGGCACA+AGG + chr2.1:65443535-65443554 None:intergenic 40.0%
ATACCTCCCAATACAATGTG+AGG - chr2.1:65444131-65444150 MS.gene002926:CDS 40.0%
ATGTGTATGGAAGTTATCCG+GGG - chr2.1:65445477-65445496 MS.gene002926:CDS 40.0%
CAAAATGTTCGCCTTTCATG+GGG - chr2.1:65445226-65445245 MS.gene002926:intron 40.0%
CAACCAAACCTTATCCCAAT+AGG + chr2.1:65442236-65442255 None:intergenic 40.0%
CAGGGTGGTTATGAGAATTA+TGG - chr2.1:65445422-65445441 MS.gene002926:CDS 40.0%
CATAATTCTCATAACCACCC+TGG + chr2.1:65445424-65445443 None:intergenic 40.0%
CCAATAGGATCTGTTAGGAT+TGG + chr2.1:65442221-65442240 None:intergenic 40.0%
CCAATCCTAACAGATCCTAT+TGG - chr2.1:65442218-65442237 MS.gene002926:intron 40.0%
CCCTAATTTCTTAAGGTCTC+AGG + chr2.1:65441691-65441710 None:intergenic 40.0%
CGGATAACTTCCATACACAT+TGG + chr2.1:65445477-65445496 None:intergenic 40.0%
CTCGTTATAACTCTGTGAAG+GGG - chr2.1:65442690-65442709 MS.gene002926:intron 40.0%
CTGTAATTCTGACCACCATT+CGG + chr2.1:65442542-65442561 None:intergenic 40.0%
CTGTTTACCAATCGCACTTA+GGG - chr2.1:65441934-65441953 MS.gene002926:intron 40.0%
GACAAAATGTTCGCCTTTCA+TGG - chr2.1:65445224-65445243 MS.gene002926:intron 40.0%
GATCCCCAATTTGAAAACCA+TGG + chr2.1:65443997-65444016 None:intergenic 40.0%
GATCCTATTGGGATAAGGTT+TGG - chr2.1:65442230-65442249 MS.gene002926:intron 40.0%
GCACGGTCGTTAAAAAGATT+TGG + chr2.1:65445330-65445349 None:intergenic 40.0%
GCTCGTTATAACTCTGTGAA+GGG - chr2.1:65442689-65442708 MS.gene002926:intron 40.0%
GGGAAAAAGTGAGCAATTGA+TGG + chr2.1:65443864-65443883 None:intergenic 40.0%
GTACATGTGAAGATTCCATC+AGG - chr2.1:65445017-65445036 MS.gene002926:intron 40.0%
GTTGTGATTGATAGGCTTAC+TGG - chr2.1:65442719-65442738 MS.gene002926:intron 40.0%
TAAGATCTGCTTTGGCACAA+GGG + chr2.1:65443534-65443553 None:intergenic 40.0%
TATGTTAGCCAGTAACCAAC+TGG - chr2.1:65444208-65444227 MS.gene002926:CDS 40.0%
TCGTTATAACTCTGTGAAGG+GGG - chr2.1:65442691-65442710 MS.gene002926:intron 40.0%
TCTGTTTACCAATCGCACTT+AGG - chr2.1:65441933-65441952 MS.gene002926:intron 40.0%
TGACTCAGAAGCAACAGAAT+GGG + chr2.1:65444599-65444618 None:intergenic 40.0%
TGAGTCTGAGAACAAAAGCA+CGG + chr2.1:65445347-65445366 None:intergenic 40.0%
TGATTGATAGGCTTACTGGT+AGG - chr2.1:65442723-65442742 MS.gene002926:intron 40.0%
TTGCTGTGAATTATGCCAAC+GGG - chr2.1:65444636-65444655 MS.gene002926:intron 40.0%
TTTAGTGCATGTCCTTGCTT+AGG - chr2.1:65443281-65443300 MS.gene002926:intron 40.0%
TTTCAGCTGAAATCAGTTCC+AGG + chr2.1:65443251-65443270 None:intergenic 40.0%
TTTGTTCAACAAGACCCATG+AGG - chr2.1:65442822-65442841 MS.gene002926:intron 40.0%
! AGAGTGCTTCTGACATACAA+TGG - chr2.1:65442506-65442525 MS.gene002926:intron 40.0%
! AGGCAAGTTTTCACCCAATA+TGG - chr2.1:65444987-65445006 MS.gene002926:intron 40.0%
! ATGCGGGTTTGTCCAATTTT+CGG - chr2.1:65445046-65445065 MS.gene002926:intron 40.0%
! CTGCCATGGTTTTCAAATTG+GGG - chr2.1:65443991-65444010 MS.gene002926:CDS 40.0%
! CTTGCTGTGAATTATGCCAA+CGG - chr2.1:65444635-65444654 MS.gene002926:intron 40.0%
! GACTGCCATGGTTTTCAAAT+TGG - chr2.1:65443989-65444008 MS.gene002926:CDS 40.0%
! GATTCACTCTGGTGCTAATT+TGG + chr2.1:65441665-65441684 None:intergenic 40.0%
! GCATATTTGAGGTTATCGAC+TGG + chr2.1:65442199-65442218 None:intergenic 40.0%
! GGAACTGATTTCAGCTGAAA+TGG - chr2.1:65443251-65443270 MS.gene002926:intron 40.0%
! GTACGCACAGTTGTGTTATT+GGG + chr2.1:65444857-65444876 None:intergenic 40.0%
! TGTTACTGATTACCTTCTCC+AGG - chr2.1:65442655-65442674 MS.gene002926:intron 40.0%
!! GCCTTCATTTTTCTTGCATC+AGG - chr2.1:65445152-65445171 MS.gene002926:intron 40.0%
!! GTTCTTGTCATTTCGCCTTT+TGG - chr2.1:65443370-65443389 MS.gene002926:intron 40.0%
!!! TGGTGTAAGTTTTGGGGTTT+AGG - chr2.1:65441557-65441576 MS.gene002926:CDS 40.0%
!!! TTTTGTTGGTGATTTGGCTG+CGG - chr2.1:65442631-65442650 MS.gene002926:intron 40.0%
AACTCCTGTTGTCTCAAAGC+AGG - chr2.1:65443198-65443217 MS.gene002926:intron 45.0%
AACTTGCCTCAGATGATCGT+CGG + chr2.1:65444976-65444995 None:intergenic 45.0%
AATCACCGATCCAGAGAGTA+CGG + chr2.1:65441383-65441402 None:intergenic 45.0%
AATTGGGCAACTTTCAGTGC+TGG - chr2.1:65442566-65442585 MS.gene002926:intron 45.0%
ACAGCAGCAACAACAGCAAA+TGG - chr2.1:65445520-65445539 MS.gene002926:CDS 45.0%
ACGCACTCCTTCAAACAAAC+AGG - chr2.1:65445249-65445268 MS.gene002926:intron 45.0%
ACTCAACAAGATCCAACCCA+GGG - chr2.1:65445362-65445381 MS.gene002926:CDS 45.0%
ACTCCTGTTGTCTCAAAGCA+GGG - chr2.1:65443199-65443218 MS.gene002926:intron 45.0%
ACTGGTAGGTCTAAGGGATA+TGG - chr2.1:65442737-65442756 MS.gene002926:intron 45.0%
AGATGATCGTCGGTGACATT+TGG + chr2.1:65444966-65444985 None:intergenic 45.0%
AGGCTTACTGGTAGGTCTAA+GGG - chr2.1:65442731-65442750 MS.gene002926:intron 45.0%
ATCAGTCATGCTGAAGTCGT+AGG - chr2.1:65443890-65443909 MS.gene002926:CDS 45.0%
ATTGCAGGAAGAAACGACTG+TGG + chr2.1:65443118-65443137 None:intergenic 45.0%
CAAACCAGCCCAGAATTACA+AGG + chr2.1:65445291-65445310 None:intergenic 45.0%
CAGCAGCAACAACAGCAAAT+GGG - chr2.1:65445521-65445540 MS.gene002926:CDS 45.0%
CTGACTCAGAAGCAACAGAA+TGG + chr2.1:65444600-65444619 None:intergenic 45.0%
GGAGCAAAGGCTATGAATGA+TGG + chr2.1:65443450-65443469 None:intergenic 45.0%
GGCTCGTTATAACTCTGTGA+AGG - chr2.1:65442688-65442707 MS.gene002926:intron 45.0%
GGGCGAAAGTTGTGATTGAT+AGG - chr2.1:65442711-65442730 MS.gene002926:intron 45.0%
GTACCTCACATTGTATTGGG+AGG + chr2.1:65444137-65444156 None:intergenic 45.0%
TAGGCTTACTGGTAGGTCTA+AGG - chr2.1:65442730-65442749 MS.gene002926:intron 45.0%
TATACCTGCTTCGGTAACAC+CGG - chr2.1:65441432-65441451 MS.gene002926:intron 45.0%
TCAACAAGACCCATGAGGAT+TGG - chr2.1:65442827-65442846 MS.gene002926:intron 45.0%
TCAGTCATGCTGAAGTCGTA+GGG - chr2.1:65443891-65443910 MS.gene002926:CDS 45.0%
TGATGAGGGTGAACAGATGA+GGG - chr2.1:65442775-65442794 MS.gene002926:intron 45.0%
TGCTGTGAATTATGCCAACG+GGG - chr2.1:65444637-65444656 MS.gene002926:intron 45.0%
TGTGGTGGCATCATAACGTA+CGG + chr2.1:65441291-65441310 None:intergenic 45.0%
! ACCTTCTCCAGGAGACTTTT+AGG - chr2.1:65442666-65442685 MS.gene002926:intron 45.0%
! CCTTCTCCAGGAGACTTTTA+GGG - chr2.1:65442667-65442686 MS.gene002926:intron 45.0%
! GGTTTGTCCAATTTTCGGAC+AGG - chr2.1:65445051-65445070 MS.gene002926:intron 45.0%
!! ATTTGCTGTTGTTGCTGCTG+TGG + chr2.1:65445521-65445540 None:intergenic 45.0%
!! TTTGCTGTTGTTGCTGCTGT+GGG + chr2.1:65445520-65445539 None:intergenic 45.0%
AAACAGGCCCTAAGTGCGAT+TGG + chr2.1:65441944-65441963 None:intergenic 50.0%
AACGAGCCCTAAAAGTCTCC+TGG + chr2.1:65442676-65442695 None:intergenic 50.0%
AATCGCACTTAGGGCCTGTT+TGG - chr2.1:65441943-65441962 MS.gene002926:intron 50.0%
ACAACAACCGCCAGCTATGT+GGG - chr2.1:65441308-65441327 MS.gene002926:CDS 50.0%
ACAGTACAACAAGTCCCCGT+TGG + chr2.1:65444654-65444673 None:intergenic 50.0%
AGACAAACCTTTCGGCTGAG+TGG + chr2.1:65442882-65442901 None:intergenic 50.0%
AGGGCTATGACTGAGATGCA+AGG - chr2.1:65442794-65442813 MS.gene002926:intron 50.0%
ATCATAACGTACGGCTGCTG+TGG + chr2.1:65441282-65441301 None:intergenic 50.0%
ATGTCACCGACGATCATCTG+AGG - chr2.1:65444967-65444986 MS.gene002926:intron 50.0%
ATTCCATCAGGCAAGCGATG+CGG - chr2.1:65445029-65445048 MS.gene002926:intron 50.0%
CAGCCCAGAATTACAAGGGT+AGG + chr2.1:65445286-65445305 None:intergenic 50.0%
CAGGAAGAAACGACTGTGGA+CGG + chr2.1:65443114-65443133 None:intergenic 50.0%
CCCTAAAAGTCTCCTGGAGA+AGG + chr2.1:65442670-65442689 None:intergenic 50.0%
CGTAATATCCACCAGCAGCA+GGG + chr2.1:65445394-65445413 None:intergenic 50.0%
CTACCCTTGTAATTCTGGGC+TGG - chr2.1:65445284-65445303 MS.gene002926:intron 50.0%
CTGACCACCATTCGGCATAA+TGG + chr2.1:65442534-65442553 None:intergenic 50.0%
CTGATGAGGGTGAACAGATG+AGG - chr2.1:65442774-65442793 MS.gene002926:intron 50.0%
GACTCAACAAGATCCAACCC+AGG - chr2.1:65445361-65445380 MS.gene002926:CDS 50.0%
GCAGCTTCGTATAACCCTAG+TGG - chr2.1:65444812-65444831 MS.gene002926:intron 50.0%
GCTTCGTATAACCCTAGTGG+CGG - chr2.1:65444815-65444834 MS.gene002926:intron 50.0%
GGAACCATTATGCCGAATGG+TGG - chr2.1:65442527-65442546 MS.gene002926:intron 50.0%
GGACAGGATCCCAATGTGTA+TGG - chr2.1:65445464-65445483 MS.gene002926:CDS 50.0%
GGATATTACGGCTATGCCCA+GGG - chr2.1:65445404-65445423 MS.gene002926:CDS 50.0%
GGCTATGACTGAGATGCAAG+GGG - chr2.1:65442796-65442815 MS.gene002926:intron 50.0%
GGGCTATGACTGAGATGCAA+GGG - chr2.1:65442795-65442814 MS.gene002926:intron 50.0%
GGTATTGTTGCGGTGGTTGT+TGG + chr2.1:65441248-65441267 None:intergenic 50.0%
GGTGGCTGTTGGTATTGTTG+CGG + chr2.1:65441258-65441277 None:intergenic 50.0%
GTCAAGAGGCTCTGTCATCT+CGG - chr2.1:65443223-65443242 MS.gene002926:intron 50.0%
GTCTCAGGTTCGATTCACTC+TGG + chr2.1:65441676-65441695 None:intergenic 50.0%
TGGATATTACGGCTATGCCC+AGG - chr2.1:65445403-65445422 MS.gene002926:CDS 50.0%
TTGACCCATGATTGACTGCG+TGG - chr2.1:65444308-65444327 MS.gene002926:CDS 50.0%
! CCTGCTGCTGGTGGATATTA+CGG - chr2.1:65445392-65445411 MS.gene002926:CDS 50.0%
! CGGTGATTTGCAGTACTGGA+TGG - chr2.1:65441395-65441414 MS.gene002926:intron 50.0%
! GCCGGGTTTTTATTAGTGGC+AGG + chr2.1:65442854-65442873 None:intergenic 50.0%
! GGATCGGTGATTTGCAGTAC+TGG - chr2.1:65441391-65441410 MS.gene002926:intron 50.0%
! GGCAGCCGGGTTTTTATTAG+TGG + chr2.1:65442858-65442877 None:intergenic 50.0%
! TCTAAAACAGGGGCTCCAGT+TGG + chr2.1:65444226-65444245 None:intergenic 50.0%
! TCTCAAAGCAGGGTGTCAAG+AGG - chr2.1:65443209-65443228 MS.gene002926:intron 50.0%
!! ACACCCTGCTTTGAGACAAC+AGG + chr2.1:65443205-65443224 None:intergenic 50.0%
!! CAACTTTCAGTGCTGGTGAG+AGG - chr2.1:65442573-65442592 MS.gene002926:intron 50.0%
!! TGTTGGTAACCAGGATACCC+CGG + chr2.1:65445497-65445516 None:intergenic 50.0%
ACATTGGGATCCTGTCCAGC+AGG + chr2.1:65445461-65445480 None:intergenic 55.0%
AGGCTCCACGCAGTCAATCA+TGG + chr2.1:65444316-65444335 None:intergenic 55.0%
AGTGGCAGGTCCAATCCTCA+TGG + chr2.1:65442840-65442859 None:intergenic 55.0%
ATAACGTACGGCTGCTGTGG+TGG + chr2.1:65441279-65441298 None:intergenic 55.0%
ATAGCTGGCGGTTGTTGTGG+TGG + chr2.1:65441306-65441325 None:intergenic 55.0%
CAAACCTTTCGGCTGAGTGG+TGG + chr2.1:65442879-65442898 None:intergenic 55.0%
CAACAAGATCCAACCCAGGG+TGG - chr2.1:65445365-65445384 MS.gene002926:CDS 55.0%
CACAACAACCGCCAGCTATG+TGG - chr2.1:65441307-65441326 MS.gene002926:CDS 55.0%
CACATAGCTGGCGGTTGTTG+TGG + chr2.1:65441309-65441328 None:intergenic 55.0%
CATCAGGAGCTGTGCAGAAG+AGG - chr2.1:65445168-65445187 MS.gene002926:intron 55.0%
CCGTAATATCCACCAGCAGC+AGG + chr2.1:65445395-65445414 None:intergenic 55.0%
CTGATGAGGTCCGTACTCTC+TGG - chr2.1:65441370-65441389 MS.gene002926:CDS 55.0%
GAGGTCCGTACTCTCTGGAT+CGG - chr2.1:65441375-65441394 MS.gene002926:CDS 55.0%
GGCTCCACGCAGTCAATCAT+GGG + chr2.1:65444315-65444334 None:intergenic 55.0%
GGCTGTTGGTATTGTTGCGG+TGG + chr2.1:65441255-65441274 None:intergenic 55.0%
GTGGCAGGTCCAATCCTCAT+GGG + chr2.1:65442839-65442858 None:intergenic 55.0%
GTTGTTGCTGCTGTGGGTGT+TGG + chr2.1:65445514-65445533 None:intergenic 55.0%
TATTACGGCTATGCCCAGGG+TGG - chr2.1:65445407-65445426 MS.gene002926:CDS 55.0%
TCTCGCTTTGTCCGCCACTA+GGG + chr2.1:65444829-65444848 None:intergenic 55.0%
TTCCATCAGGCAAGCGATGC+GGG - chr2.1:65445030-65445049 MS.gene002926:intron 55.0%
TTCTCGCTTTGTCCGCCACT+AGG + chr2.1:65444830-65444849 None:intergenic 55.0%
! AAGGAGTGCGTCCCCATGAA+AGG + chr2.1:65445240-65445259 None:intergenic 55.0%
! GGAAGTTATCCGGGGTATCC+TGG - chr2.1:65445485-65445504 MS.gene002926:CDS 55.0%
!! TGCTGTGGGTGTTGGTAACC+AGG + chr2.1:65445506-65445525 None:intergenic 55.0%
AACCCGCATCGCTTGCCTGA+TGG + chr2.1:65445035-65445054 None:intergenic 60.0%
ACAACCGCCAGCTATGTGGG+CGG - chr2.1:65441311-65441330 MS.gene002926:CDS 60.0%
AGCAGCAGGGTAACCACCCT+GGG + chr2.1:65445381-65445400 None:intergenic 60.0%
AGGTCGTCGAGGCAGGATGA+TGG - chr2.1:65442593-65442612 MS.gene002926:intron 60.0%
AGTACGGACCTCATCAGCGC+TGG + chr2.1:65441367-65441386 None:intergenic 60.0%
CAGGGGCTCCAGTTGGTTAC+TGG + chr2.1:65444219-65444238 None:intergenic 60.0%
GATGCAACCAGGACACGGCA+TGG - chr2.1:65441206-65441225 MS.gene002926:CDS 60.0%
GGTGGTTGTTGGCCCATGGT+GGG + chr2.1:65441237-65441256 None:intergenic 60.0%
TTGCGGTGGTTGTTGGCCCA+TGG + chr2.1:65441241-65441260 None:intergenic 60.0%
TTGGGATCCTGTCCAGCAGG+AGG + chr2.1:65445458-65445477 None:intergenic 60.0%
! CTGAGGAGGCTGAGCGGATT+GGG + chr2.1:65441337-65441356 None:intergenic 60.0%
ACGTACGGCTGCTGTGGTGG+TGG + chr2.1:65441276-65441295 None:intergenic 65.0%
CAGCAGCAGGGTAACCACCC+TGG + chr2.1:65445382-65445401 None:intergenic 65.0%
CAGGGTGGTTACCCTGCTGC+TGG - chr2.1:65445380-65445399 MS.gene002926:CDS 65.0%
CGGTGGTTGTTGGCCCATGG+TGG + chr2.1:65441238-65441257 None:intergenic 65.0%
CTGCTTCGGTAACACCGGCG+AGG - chr2.1:65441437-65441456 MS.gene002926:intron 65.0%
GATTGGGCCGCCCACATAGC+TGG + chr2.1:65441321-65441340 None:intergenic 65.0%
GCAGGGTAACCACCCTGGGT+TGG + chr2.1:65445377-65445396 None:intergenic 65.0%
GCTGAGGAGGCTGAGCGGAT+TGG + chr2.1:65441338-65441357 None:intergenic 65.0%
GCTGCCACCACTCAGCCGAA+AGG - chr2.1:65442872-65442891 MS.gene002926:intron 65.0%
GGCATGGCTCCTCCCACCAT+GGG - chr2.1:65441222-65441241 MS.gene002926:CDS 65.0%
GGCTCTGTCATCTCGGAGCC+TGG - chr2.1:65443230-65443249 MS.gene002926:intron 65.0%
GGTGGTTACCCTGCTGCTGG+TGG - chr2.1:65445383-65445402 MS.gene002926:CDS 65.0%
GGTTACGCTGCTCCTCCTGC+TGG - chr2.1:65445443-65445462 MS.gene002926:CDS 65.0%
TGGTGAGAGGTCGTCGAGGC+AGG - chr2.1:65442586-65442605 MS.gene002926:intron 65.0%
TTCGGCTGAGTGGTGGCAGC+CGG + chr2.1:65442872-65442891 None:intergenic 65.0%
! ACGGACCTCATCAGCGCTGG+CGG + chr2.1:65441364-65441383 None:intergenic 65.0%
! GGTTGTTGGCCCATGGTGGG+AGG + chr2.1:65441234-65441253 None:intergenic 65.0%
! GTGCTGGTGAGAGGTCGTCG+AGG - chr2.1:65442582-65442601 MS.gene002926:intron 65.0%
!! CTCGCCGGTGTTACCGAAGC+AGG + chr2.1:65441439-65441458 None:intergenic 65.0%
!! GCTGCTGTGGTGGTGGCTGT+TGG + chr2.1:65441269-65441288 None:intergenic 65.0%
CGCTGCTCCTCCTGCTGGAC+AGG - chr2.1:65445448-65445467 MS.gene002926:CDS 70.0%
CGGCATGGCTCCTCCCACCA+TGG - chr2.1:65441221-65441240 MS.gene002926:CDS 70.0%
GGAGGAGCCATGCCGTGTCC+TGG + chr2.1:65441216-65441235 None:intergenic 70.0%
GGGCTGCTGAGGAGGCTGAG+CGG + chr2.1:65441343-65441362 None:intergenic 70.0%
TCGGCTGAGTGGTGGCAGCC+GGG + chr2.1:65442871-65442890 None:intergenic 70.0%
TGGGCCGCCCACATAGCTGG+CGG + chr2.1:65441318-65441337 None:intergenic 70.0%
!! CGGACCTCATCAGCGCTGGC+GGG + chr2.1:65441363-65441382 None:intergenic 70.0%
!! GCAGCCCGCCAGCGCTGATG+AGG - chr2.1:65441356-65441375 MS.gene002926:CDS 75.0%
!! TCAGCGCTGGCGGGCTGCTG+AGG + chr2.1:65441354-65441373 None:intergenic 75.0%
!!! GCGCTGGCGGGCTGCTGAGG+AGG + chr2.1:65441351-65441370 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 65441204 65445553 65441204 ID=MS.gene002926
chr2.1 mRNA 65441204 65445553 65441204 ID=MS.gene002926.t1;Parent=MS.gene002926
chr2.1 exon 65445299 65445553 65445299 ID=MS.gene002926.t1.exon1;Parent=MS.gene002926.t1
chr2.1 CDS 65445299 65445553 65445299 ID=cds.MS.gene002926.t1;Parent=MS.gene002926.t1
chr2.1 exon 65443864 65444341 65443864 ID=MS.gene002926.t1.exon2;Parent=MS.gene002926.t1
chr2.1 CDS 65443864 65444341 65443864 ID=cds.MS.gene002926.t1;Parent=MS.gene002926.t1
chr2.1 exon 65441889 65441941 65441889 ID=MS.gene002926.t1.exon3;Parent=MS.gene002926.t1
chr2.1 CDS 65441889 65441941 65441889 ID=cds.MS.gene002926.t1;Parent=MS.gene002926.t1
chr2.1 exon 65441685 65441815 65441685 ID=MS.gene002926.t1.exon4;Parent=MS.gene002926.t1
chr2.1 CDS 65441685 65441815 65441685 ID=cds.MS.gene002926.t1;Parent=MS.gene002926.t1
chr2.1 exon 65441487 65441583 65441487 ID=MS.gene002926.t1.exon5;Parent=MS.gene002926.t1
chr2.1 CDS 65441487 65441583 65441487 ID=cds.MS.gene002926.t1;Parent=MS.gene002926.t1
chr2.1 exon 65441204 65441395 65441204 ID=MS.gene002926.t1.exon6;Parent=MS.gene002926.t1
chr2.1 CDS 65441204 65441395 65441204 ID=cds.MS.gene002926.t1;Parent=MS.gene002926.t1
Gene Sequence

>MS.gene002926

ATGATGCAACCAGGACACGGCATGGCTCCTCCCACCATGGGCCAACAACCACCGCAACAATACCAACAGCCACCACCACAGCAGCCGTACGTTATGATGCCACCACAACAACCGCCAGCTATGTGGGCGGCCCAATCCGCTCAGCCTCCTCAGCAGCCCGCCAGCGCTGATGAGGTCCGTACTCTCTGGATCGGTGATTTGCAGTACTGGATGGATGAGAATTATCTATATACCTGCTTCGGTAACACCGGCGAGGTATAATATCTTTCTCTCTCTTAATTGTAGAATTAGGGCTTTATTTTGTGTGGTTATTTGTATTATAAATCAAAATCAATTTTTTATTGATTGATTATTGGTGTAAGTTTTGGGGTTTAGGTTGTTTTATTCTGCTAGTGAATTTAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGAAGCTAAATTAACTCACCCAAATTAGCACCAGAGTGAATCGAACCTGAGACCTTAAGAAATTAGGGTGTTTTAATTTTGGTTTGTAGTTGTTTTATCCTGTTTGTGAAATTAGGGTTTTTAATTTTGGTTTGTAGTAGTTTTATCCTATTTGTGAAATTAGGGTTTTTAATTTTGGTTTGTAGTTGTTTTAGTCTGTTTGTGAAATTGGATTTTGTAATTTTGGGTTGTAGTTATTTTATTTTGTTAGTGAAATCAGGGGTTTTAATTTTGGTTTGTGGTTGTTTTATTCTGTTTACCAATCGCACTTAGGGCCTGTTTGGATAAACTGCTTATTTGCAGTTTATAGCACACGCTCTTATCATATAAGCTACGGGCTTTTTTTTTATAGAAAAATGTAAAATGTAAACTAATGCTAAATTGTTTTTTTATATGCTATAAGCTGTTTTTAAAACTATATCGGAGAACTTGTGAAAATAAGCCAAAAAAAGCTTGTGAAAATTGTCACAAGCTGTTTTCATTAGTTCTTACAAACATTCTCACAAAACTTATGCCAGTCGATAACCTCAAATATGCCAATCCTAACAGATCCTATTGGGATAAGGTTTGGTTGTTGTTGTAGTTGTTTTATTCTGTTTTTGAAAGTAGGGTATTGTAATTTTGGTTTGTAGGTGTTTTATGCTGTTCGTAAAATTTGGGTTTTGAAATTTTGGTTTTGTAGTTTGTTTATTATTCTGTTAGTGAAATTTGGGTTTTCTGATTTTGTATTGCAGTTGACATCTGTGAAAGTTATTAGAAATAAGCAAACTAGTCAATCAGAAGGTTATGGCTTTATCGAGTTTAATACTCGTGCTACTGCTGAGAGAGTGCTTCTGACATACAATGGAACCATTATGCCGAATGGTGGTCAGAATTACAGATTGAATTGGGCAACTTTCAGTGCTGGTGAGAGGTCGTCGAGGCAGGATGATGGTCCTGATCATACCATTTTTGTTGGTGATTTGGCTGCGGATGTTACTGATTACCTTCTCCAGGAGACTTTTAGGGCTCGTTATAACTCTGTGAAGGGGGCGAAAGTTGTGATTGATAGGCTTACTGGTAGGTCTAAGGGATATGGTTTTGTGAGATTTGCTGATGAGGGTGAACAGATGAGGGCTATGACTGAGATGCAAGGGGTTCTTTGTTCAACAAGACCCATGAGGATTGGACCTGCCACTAATAAAAACCCGGCTGCCACCACTCAGCCGAAAGGTTTGTCTCTTATATATCTGCTGTTTTCTTTTGCTGTCTGTGAATGTTTGTTCTGCTGCATAATGGTAAATTGTTGTCTTTCTTTAGTTGTCTTACTAATATGTGTGATGTTGGTTAGTTGAATTTAAGGCCTTGTGTACCAAATTACCTTTTGTAGTGTATGCTGAATGCTGCTGTTTAAGTTATGATTCTTTTCGGTTACGCTCGTGAAGATTTTCCGTCCACAGTCGTTTCTTCCTGCAATTTTCCTTTAAAAAAATTGGGCTAAATAAATTATTGCATATGTAGTAATAAAATCTTATAGAACTCCTGTTGTCTCAAAGCAGGGTGTCAAGAGGCTCTGTCATCTCGGAGCCTGGAACTGATTTCAGCTGAAATGGTTACCATTTTAGTGCATGTCCTTGCTTAGGTCAGTTATATGTTTATGTTTGCCCGTTATATTTTTGCGGCATTTTCTTTTCCGCCTACATTTTCAAGTTCTTGTCATTTCGCCTTTTGGTTTAGTTTTTACTCTTATCAAGTTCGCAATTTCTCTGCTTACTTATTTTTCAGTCCATCATTCATAGCCTTTGCTCCTTTAATTTACTCCTATTGGTTTTTCTTAAGAACTACAGACTTTAATTTCTTTAGTAGCTTTCCCTTGTGCCAAAGCAGATCTTATTTACATTTAGCTAAATCTTCTGTTCTTCCAGCAAATGTTTATTTATTTCAGTTTACATTCACCCGTCCATAAGAAAAAAAATGTTGAGATAATCAATTTTATCCTCTTATTCTTCTCATATATTTTATTTTACCCTCTTATTCTTATTTGTTCCTCCTTTAAGTCTGAAAATGTTTGATGTTGTATGATAGAGATGATCAATTTCATGGTTTTTATCTGTGTGTAAAGGTTTTAATTGTTTTTACTTTTTAAAGGTTTTGCCTATGCATTATACCATAAGCTGTTTGAATTCATCTTGTATGCATTCCATCAATTGCTCACTTTTTCCCTTTTAGATCAGTCATGCTGAAGTCGTAGGGTTTTAGATAAAGATGGGGGAAGAGATAGACTTGCAACTGTGAATTATGACGAATATTCATCGATTTCTTTTATATGACTGCCATGGTTTTCAAATTGGGGATCAAAAATAAATTTGTAACATTCATTTTGCAAAGAAAAATTTCTGCCATCTATCATACGAATGATACAATAATCCAATAATTTTTAAGTAAAGGACTAACTGCTCAACTCAATCAGATACCTCCCAATACAATGTGAGGTACTTGTCTCAAATTAAATTGATAGAAGAGTAAAGGTATATCCAAATAAGGTTATATGTTAGCCAGTAACCAACTGGAGCCCCTGTTTTAGAATAATGAAAGAGGTCATCTTCTGAAGTCTGAAATTAGAAGTGACTAATTTGATTTTCTGGAGTTGACCCATGATTGACTGCGTGGAGCCTGTGTATCACTTTGTGATTTTCTAACTGTCAGTTTGATGTGATGAATTTGTGGGTAGTTTATACCTGTCTTCTGCAAATTGTAACATCTTAACCGACAACTATGTATTGAATTTGATTTATATGGATGCTTCGTAAATTTTATTTTAATTTATATTGGCTAAACTTACTATGTCATTGTTCTGTACTTATAACTTGATCTCAGTTAAGTAGTGTTATTTTTTTATTTGATGGTTTCCGGTGCAAGAAAATGTAAGTCACTGCCCATTCTGTTGCTTCTGAGTCAGCTCCCTAAATATTTGCTTGCTGTGAATTATGCCAACGGGGACTTGTTGTACTGTATCAAACAATTAAATAGATAGTTGCACCTTTGGTTATTAAATAAATAGTTGAGATATGTTGTCTTGCTTTTAGCTTTGTTTTTGAATTCATTTTCTATTCACATAATTCATCTTTTTACTTCACTTTCGTTTTGAAATGCAGCTTCGTATAACCCTAGTGGCGGACAAAGCGAGAATGATCCCAATAACACAACTGTGCGTACTTATTTTAATATGTTGAAACTCTGCTTTGTTTGCTACTTGTTTGTGACTTATCATTTCATTGTAGATTTTTGTTGGCAACTTGGATCCAAATGTCACCGACGATCATCTGAGGCAAGTTTTCACCCAATATGGTGAACTAGTACATGTGAAGATTCCATCAGGCAAGCGATGCGGGTTTGTCCAATTTTCGGACAGGTAATATTACTTCTATATTTGTTTTTTCTATTCTAATATGTGCTAAATCTTTTTCTAGTCTTTGCTGTACTAAGATTGTGCCTTCATTTTTCTTGCATCAGGAGCTGTGCAGAAGAGGCAATACGTGTTTTGAACGGAACTTTATTGGGTGGACAAAATGTTCGCCTTTCATGGGGACGCACTCCTTCAAACAAACAGGTAATATATTAACCTACCCTTGTAATTCTGGGCTGGTTTGACATCGAAGTCTTATTCCAAATCTTTTTAACGACCGTGCTTTTGTTCTCAGACTCAACAAGATCCAACCCAGGGTGGTTACCCTGCTGCTGGTGGATATTACGGCTATGCCCAGGGTGGTTATGAGAATTATGGTTACGCTGCTCCTCCTGCTGGACAGGATCCCAATGTGTATGGAAGTTATCCGGGGTATCCTGGTTACCAACACCCACAGCAGCAACAACAGCAAATGGGATATAGCTAA
Protein sequence

>MS.gene002926.t1

MMQPGHGMAPPTMGQQPPQQYQQPPPQQPYVMMPPQQPPAMWAAQSAQPPQQPASADEVRTLWIGDLQYWMDENYLYTCFGNTGELTSVKVIRNKQTSQSEGYGFIEFNTRATAERVLLTYNGTIMPNGGQNYRLNWATFSAGERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFVRFADEGEQMRAMTEMQGVLCSTRPMRIGPATNKNPAATTQPKASYNPSGGQSENDPNNTTIFVGNLDPNVTDDHLRQVFTQYGELVHVKIPSGKRCGFVQFSDRSCAEEAIRVLNGTLLGGQNVRLSWGRTPSNKQTQQDPTQGGYPAAGGYYGYAQGGYENYGYAAPPAGQDPNVYGSYPGYPGYQHPQQQQQQMGYS