AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047966

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047966.t1 MTR_2g022950 99.501 401 2 0 1 401 1 401 0.0 822
MS.gene047966.t1 MTR_4g131970 78.649 370 61 12 41 401 51 411 0.0 552
MS.gene047966.t1 MTR_2g022950 99.180 244 2 0 1 244 1 244 0.0 504
MS.gene047966.t1 MTR_2g022950 99.180 244 2 0 1 244 1 244 1.48e-180 503
MS.gene047966.t1 MTR_1g020080 52.696 408 159 9 9 393 27 423 9.28e-129 377
MS.gene047966.t1 MTR_3g101370 57.143 336 138 4 54 389 87 416 1.64e-127 374
MS.gene047966.t1 MTR_2g097960 55.080 374 123 6 51 393 6 365 2.73e-127 374
MS.gene047966.t1 MTR_4g086600 59.211 304 105 4 57 342 113 415 8.99e-125 368
MS.gene047966.t1 MTR_1g020080 52.330 279 111 5 9 268 27 302 6.70e-84 258
MS.gene047966.t1 MTR_3g101370 59.524 210 83 2 54 263 87 294 6.74e-84 258
MS.gene047966.t1 MTR_3g109090 32.803 314 179 8 49 343 35 335 1.08e-41 152
MS.gene047966.t1 MTR_3g109090 22.907 227 148 4 150 370 39 244 2.48e-12 68.6
MS.gene047966.t1 MTR_3g109090 32.803 314 179 8 49 343 51 351 2.11e-41 151
MS.gene047966.t1 MTR_3g109090 22.907 227 148 4 150 370 55 260 3.11e-12 68.2
MS.gene047966.t1 MTR_4g124940 30.769 351 201 11 18 343 3 336 6.11e-38 141
MS.gene047966.t1 MTR_8g022050 30.275 327 193 11 28 335 35 345 1.94e-33 129
MS.gene047966.t1 MTR_4g085540 29.658 263 158 8 61 318 35 275 1.21e-28 118
MS.gene047966.t1 MTR_4g085540 26.056 284 198 8 62 340 124 400 2.15e-26 111
MS.gene047966.t1 MTR_1g019150 28.897 263 160 9 61 318 33 273 1.67e-25 108
MS.gene047966.t1 MTR_1g019150 25.564 266 185 9 62 321 122 380 5.74e-20 92.4
MS.gene047966.t1 MTR_7g102730 24.585 301 182 9 49 338 5 271 8.92e-25 107
MS.gene047966.t1 MTR_7g102730 25.352 284 194 8 62 337 100 373 2.31e-19 90.5
MS.gene047966.t1 MTR_3g102040 28.517 263 161 8 61 318 25 265 5.72e-24 104
MS.gene047966.t1 MTR_3g102040 26.277 274 178 8 62 324 114 374 2.21e-20 93.6
MS.gene047966.t1 MTR_3g102040 29.545 176 101 5 156 326 25 182 3.48e-13 71.6
MS.gene047966.t1 MTR_1g061870 24.913 289 185 7 41 324 1 262 1.10e-22 100
MS.gene047966.t1 MTR_1g061870 24.013 304 210 9 40 338 88 375 8.03e-15 76.6
MS.gene047966.t1 MTR_1g097440 28.417 278 171 10 61 333 31 285 6.08e-22 98.6
MS.gene047966.t1 MTR_1g097440 21.914 324 225 10 24 340 95 397 2.50e-16 81.3
MS.gene047966.t1 MTR_6g040190 26.592 267 165 8 58 319 23 263 6.67e-21 95.1
MS.gene047966.t1 MTR_6g040190 22.848 302 216 7 62 357 115 405 4.79e-17 83.6
MS.gene047966.t1 MTR_1g056520 30.348 201 128 6 52 244 100 296 1.35e-20 92.0
MS.gene047966.t1 MTR_3g075500 31.285 179 114 4 62 235 111 285 3.22e-19 87.4
MS.gene047966.t1 MTR_3g075500 27.230 213 126 6 135 329 79 280 4.90e-12 66.6
MS.gene047966.t1 MTR_3g075500 32.515 163 101 4 62 219 111 269 9.20e-18 83.2
MS.gene047966.t1 MTR_7g106440 27.451 204 128 7 51 243 100 294 3.68e-16 79.3
MS.gene047966.t1 MTR_3g065190 27.957 186 126 3 51 236 16 193 6.26e-16 79.0
MS.gene047966.t1 MTR_3g065190 25.946 185 111 5 154 331 24 189 2.03e-12 68.6
MS.gene047966.t1 MTR_4g104470 28.495 186 107 4 62 235 124 295 6.60e-16 78.2
MS.gene047966.t1 MTR_4g104470 27.513 189 119 5 146 328 113 289 1.77e-12 68.2
MS.gene047966.t1 MTR_1g064230 29.688 192 115 4 62 235 86 275 7.12e-16 77.8
MS.gene047966.t1 MTR_1g064230 30.052 193 115 6 153 329 82 270 1.49e-13 70.9
MS.gene047966.t1 MTR_6g040070 20.132 303 226 8 62 357 17 310 9.74e-15 76.6
MS.gene047966.t1 MTR_3g448370 26.087 253 142 9 153 390 196 418 3.87e-14 74.7
MS.gene047966.t1 MTR_3g448370 26.087 253 142 9 153 390 91 313 3.91e-14 74.7
MS.gene047966.t1 MTR_3g448370 26.087 253 142 9 153 390 207 429 4.49e-14 74.7
MS.gene047966.t1 MTR_3g448370 26.087 253 142 9 153 390 193 415 4.54e-14 74.7
MS.gene047966.t1 MTR_3g448370 26.087 253 142 9 153 390 196 418 5.15e-14 74.3
MS.gene047966.t1 MTR_3g098620 25.962 208 124 6 141 347 263 441 1.35e-13 73.2
MS.gene047966.t1 MTR_3g098620 25.962 208 124 6 141 347 263 441 1.38e-13 73.2
MS.gene047966.t1 MTR_3g098620 25.962 208 124 6 141 347 263 441 1.65e-13 72.8
MS.gene047966.t1 MTR_7g104800 21.053 285 187 8 62 339 103 356 2.39e-13 71.6
MS.gene047966.t1 MTR_8g076100 22.297 296 193 8 62 347 420 688 3.50e-13 72.0
MS.gene047966.t1 MTR_7g118120 21.528 288 184 10 62 338 106 362 3.70e-13 71.2
MS.gene047966.t1 MTR_8g076100 22.297 296 193 8 62 347 420 688 5.46e-13 71.2
MS.gene047966.t1 MTR_8g076100 22.297 296 193 8 62 347 420 688 7.99e-13 70.9
MS.gene047966.t1 MTR_1g045510 26.667 195 118 4 51 235 104 283 8.92e-13 68.6
MS.gene047966.t1 MTR_7g010360 22.330 309 188 10 83 370 373 650 2.58e-12 68.9
MS.gene047966.t1 MTR_8g007390 23.420 269 172 10 62 322 217 459 3.64e-12 68.6
MS.gene047966.t1 MTR_8g007390 23.420 269 172 10 62 322 216 458 4.12e-12 68.6
MS.gene047966.t1 MTR_2g049640 25.967 181 112 5 153 332 194 353 5.04e-12 68.2
MS.gene047966.t1 MTR_1g080150 39.474 76 45 1 154 229 131 205 1.63e-11 64.3
MS.gene047966.t1 MTR_1g115375 27.136 199 137 5 57 253 217 409 3.21e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047966.t1 AT1G11650 65.205 342 103 6 38 377 39 366 2.21e-156 447
MS.gene047966.t1 AT5G54900 64.759 332 102 7 51 378 51 371 9.06e-145 417
MS.gene047966.t1 AT4G27000 64.205 352 106 5 38 376 45 389 3.12e-144 416
MS.gene047966.t1 AT1G11650 67.159 271 84 3 38 306 39 306 1.78e-132 382
MS.gene047966.t1 AT3G19130 58.710 310 110 5 55 348 103 410 8.56e-122 360
MS.gene047966.t1 AT1G49600 55.132 341 127 6 50 379 109 434 1.13e-120 357
MS.gene047966.t1 AT1G49600 58.140 301 116 3 50 342 109 407 6.30e-119 353
MS.gene047966.t1 AT1G49600 58.140 301 116 3 50 342 109 407 6.30e-119 353
MS.gene047966.t1 AT1G47490 50.758 396 177 8 4 394 48 430 9.87e-118 349
MS.gene047966.t1 AT5G19350 53.279 366 135 8 48 393 8 357 1.73e-117 348
MS.gene047966.t1 AT5G19350 52.128 376 137 8 48 399 8 364 7.56e-117 347
MS.gene047966.t1 AT1G47500 53.782 357 146 8 45 394 88 432 2.24e-115 343
MS.gene047966.t1 AT1G47490 50.746 268 119 6 4 265 48 308 5.45e-77 241
MS.gene047966.t1 AT1G47490 25.758 198 124 5 141 328 87 271 1.46e-12 68.6
MS.gene047966.t1 AT1G47500 54.867 226 92 5 45 264 88 309 1.80e-73 232
MS.gene047966.t1 AT1G47500 26.786 224 138 7 141 354 89 296 5.44e-12 66.6
MS.gene047966.t1 AT1G54080 32.432 333 190 11 22 335 30 346 5.51e-40 147
MS.gene047966.t1 AT1G54080 32.047 337 190 12 22 335 30 350 3.28e-38 143
MS.gene047966.t1 AT1G17370 30.556 324 193 10 28 335 27 334 2.91e-35 134
MS.gene047966.t1 AT3G14100 30.887 327 191 11 28 335 32 342 1.00e-34 133
MS.gene047966.t1 AT1G17370 30.275 327 193 11 28 335 27 337 2.48e-34 132
MS.gene047966.t1 AT4G34110 27.018 285 181 7 61 340 37 299 9.63e-28 115
MS.gene047966.t1 AT4G34110 25.704 284 199 8 62 340 126 402 5.11e-25 107
MS.gene047966.t1 AT2G23350 27.875 287 195 8 59 340 133 412 1.88e-27 115
MS.gene047966.t1 AT2G23350 28.137 263 162 8 61 318 47 287 6.84e-24 104
MS.gene047966.t1 AT1G22760 28.446 341 202 13 7 340 8 313 1.45e-25 109
MS.gene047966.t1 AT1G22760 22.997 287 205 9 62 340 138 416 7.21e-19 89.4
MS.gene047966.t1 AT1G49760 26.667 285 182 7 61 340 46 308 7.27e-25 107
MS.gene047966.t1 AT1G49760 27.612 268 182 7 59 321 132 392 3.49e-22 99.4
MS.gene047966.t1 AT1G49760 27.228 202 121 6 51 235 213 405 7.40e-14 73.9
MS.gene047966.t1 AT1G49760 26.667 285 182 7 61 340 46 308 7.27e-25 107
MS.gene047966.t1 AT1G49760 27.612 268 182 7 59 321 132 392 3.49e-22 99.4
MS.gene047966.t1 AT1G49760 27.228 202 121 6 51 235 213 405 7.40e-14 73.9
MS.gene047966.t1 AT1G71770 26.316 285 184 8 61 340 60 323 4.43e-24 105
MS.gene047966.t1 AT1G71770 24.390 287 201 9 62 340 148 426 2.32e-21 96.7
MS.gene047966.t1 AT1G71770 26.316 285 184 8 61 340 60 323 4.43e-24 105
MS.gene047966.t1 AT1G71770 24.390 287 201 9 62 340 148 426 2.32e-21 96.7
MS.gene047966.t1 AT2G36660 26.224 286 180 10 61 341 25 284 1.09e-23 103
MS.gene047966.t1 AT2G36660 22.977 309 213 11 40 340 97 388 6.30e-14 73.9
MS.gene047966.t1 AT3G16380 27.491 291 187 10 62 341 114 391 2.52e-21 96.3
MS.gene047966.t1 AT3G16380 26.568 271 174 7 61 326 22 272 2.28e-19 90.5
MS.gene047966.t1 AT1G34140 24.101 278 195 8 62 333 33 300 4.45e-18 85.9
MS.gene047966.t1 AT3G52380 28.079 203 130 6 54 245 111 308 2.65e-17 82.8
MS.gene047966.t1 AT5G50250 31.053 190 118 5 48 235 108 286 9.13e-17 80.5
MS.gene047966.t1 AT4G24770 30.435 184 110 4 62 237 152 325 1.20e-16 80.9
MS.gene047966.t1 AT4G24770 26.289 194 125 4 141 328 136 317 2.65e-11 64.7
MS.gene047966.t1 AT4G24770 30.435 184 110 4 62 237 152 325 1.20e-16 80.9
MS.gene047966.t1 AT4G24770 26.289 194 125 4 141 328 136 317 2.65e-11 64.7
MS.gene047966.t1 AT2G37220 29.439 214 126 5 44 237 77 285 1.32e-14 74.3
MS.gene047966.t1 AT2G37220 28.947 190 120 5 154 329 90 278 9.73e-13 68.6
MS.gene047966.t1 AT2G18510 26.882 186 128 3 51 236 16 193 1.63e-14 74.7
MS.gene047966.t1 AT2G44710 24.908 273 163 11 62 322 216 458 1.11e-13 73.6
MS.gene047966.t1 AT2G44710 24.908 273 163 11 62 322 216 458 1.11e-13 73.6
MS.gene047966.t1 AT4G13850 41.772 79 45 1 157 235 37 114 1.12e-13 68.2
MS.gene047966.t1 AT2G44710 25.275 273 162 11 62 322 131 373 1.38e-13 73.2
MS.gene047966.t1 AT3G13224 28.643 199 135 4 59 257 9 200 1.81e-13 71.6
MS.gene047966.t1 AT3G13224 24.121 199 128 6 157 349 12 193 2.44e-11 65.1
MS.gene047966.t1 AT4G13850 43.373 83 45 2 157 239 37 117 1.91e-13 67.8
MS.gene047966.t1 AT4G13850 43.373 83 45 2 157 239 37 117 2.33e-13 67.8
MS.gene047966.t1 AT4G13850 43.373 83 45 2 157 239 37 117 2.60e-13 67.8
MS.gene047966.t1 AT4G14300 30.508 177 109 5 157 324 8 179 3.38e-13 71.2
MS.gene047966.t1 AT4G14300 30.508 177 109 5 157 324 8 179 3.38e-13 71.2
MS.gene047966.t1 AT1G60000 29.545 176 116 4 62 235 87 256 3.56e-13 69.7
MS.gene047966.t1 AT3G13224 28.571 196 133 4 62 257 21 209 7.84e-13 69.7
MS.gene047966.t1 AT3G13224 24.121 199 128 6 157 349 21 202 1.45e-11 65.9
MS.gene047966.t1 AT2G33410 31.613 155 96 2 62 207 8 161 3.27e-12 68.2
MS.gene047966.t1 AT2G42890 26.866 201 111 6 141 332 169 342 6.54e-12 67.8
MS.gene047966.t1 AT2G42890 26.866 201 111 6 141 332 169 342 6.54e-12 67.8
MS.gene047966.t1 AT2G42890 26.866 201 111 6 141 332 182 355 6.58e-12 67.8
MS.gene047966.t1 AT5G47620 28.477 151 102 3 62 207 8 157 6.68e-12 67.4
MS.gene047966.t1 AT5G47620 28.477 151 102 3 62 207 8 157 6.68e-12 67.4
MS.gene047966.t1 AT5G47620 28.477 151 102 3 62 207 8 157 6.68e-12 67.4
MS.gene047966.t1 AT5G40490 24.378 201 144 4 50 250 32 224 7.27e-12 67.0
MS.gene047966.t1 AT3G04500 39.474 76 45 1 154 229 136 210 7.83e-12 65.5
MS.gene047966.t1 AT4G00830 20.608 296 200 9 62 351 118 384 1.48e-11 66.2
MS.gene047966.t1 AT4G00830 20.608 296 200 9 62 351 118 384 1.48e-11 66.2
MS.gene047966.t1 AT4G00830 20.608 296 200 9 62 351 118 384 1.48e-11 66.2
MS.gene047966.t1 AT1G58470 25.683 183 112 6 151 314 2 179 1.98e-11 65.5
MS.gene047966.t1 AT1G58470 25.683 183 112 6 151 314 2 179 1.98e-11 65.5
MS.gene047966.t1 AT1G48920 26.230 183 113 5 46 210 281 459 3.66e-11 65.1
MS.gene047966.t1 AT3G52150 26.923 182 114 6 157 328 78 250 3.82e-11 63.5
MS.gene047966.t1 AT3G52150 26.923 182 114 6 157 328 78 250 3.82e-11 63.5
MS.gene047966.t1 AT4G00830 20.270 296 201 9 62 351 118 384 4.85e-11 64.7
MS.gene047966.t1 AT3G52660 19.932 296 194 7 62 345 94 358 6.92e-11 64.3
MS.gene047966.t1 AT3G52660 19.932 296 194 7 62 345 94 358 6.92e-11 64.3
MS.gene047966.t1 AT3G52660 19.932 296 194 7 62 345 94 358 6.92e-11 64.3
MS.gene047966.t1 AT2G16940 29.412 187 110 8 155 329 182 358 7.88e-11 64.3
MS.gene047966.t1 AT2G16940 29.412 187 110 8 155 329 41 217 8.71e-11 63.5
MS.gene047966.t1 AT2G16940 29.412 187 110 8 155 329 41 217 8.71e-11 63.5
MS.gene047966.t1 AT2G16940 29.412 187 110 8 155 329 231 407 9.16e-11 63.9

Find 145 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATTACCTGTCCGAAAAT+TGG 0.249363 2.4:+64501742 None:intergenic
AGTACGCACAGTTGTGTTAT+TGG 0.276538 2.4:+64501945 None:intergenic
CTGAGGAGGCTGAGCGGATT+GGG 0.307940 2.4:+64505457 None:intergenic
GTTGTGATTGATAGGCTTAC+TGG 0.319710 2.4:-64504087 MS.gene047966:CDS
GACAAAATGTTCGCCTTTCA+TGG 0.326353 2.4:-64501576 MS.gene047966:CDS
CATGTACTAGTTCACCATAT+TGG 0.331562 2.4:+64501799 None:intergenic
TTCGGCTGAGTGGTGGCAGC+CGG 0.333982 2.4:+64503937 None:intergenic
CAGGGTGGTTATGAGAATTA+TGG 0.335183 2.4:-64501378 MS.gene047966:CDS
TAGGCTTACTGGTAGGTCTA+AGG 0.336332 2.4:-64504076 MS.gene047966:CDS
GTCAGAATTACAGATTGAAT+TGG 0.341841 2.4:-64504257 MS.gene047966:CDS
CTGACCACCATTCGGCATAA+TGG 0.348543 2.4:+64504275 None:intergenic
ACTGGTAGGTCTAAGGGATA+TGG 0.353776 2.4:-64504069 MS.gene047966:CDS
TATATTACCTGTTTGTTTGA+AGG 0.362349 2.4:+64501544 None:intergenic
CGCTGCTCCTCCTGCTGGAC+AGG 0.368738 2.4:-64501352 MS.gene047966:CDS
ATGTACTAGTTCACCATATT+GGG 0.373760 2.4:+64501800 None:intergenic
GCTGAGGAGGCTGAGCGGAT+TGG 0.376833 2.4:+64505456 None:intergenic
AGATGATCGTCGGTGACATT+TGG 0.384630 2.4:+64501837 None:intergenic
CCTGCTGCTGGTGGATATTA+CGG 0.389047 2.4:-64501408 MS.gene047966:CDS
CAATGTGTATGGAAGTTATC+CGG 0.390591 2.4:-64501325 MS.gene047966:CDS
GTACGCACAGTTGTGTTATT+GGG 0.391359 2.4:+64501946 None:intergenic
ACAGCAGCAACAACAGCAAA+TGG 0.403314 2.4:-64501280 MS.gene047966:CDS
GGGCGAAAGTTGTGATTGAT+AGG 0.409258 2.4:-64504095 MS.gene047966:CDS
TCAGCGCTGGCGGGCTGCTG+AGG 0.435204 2.4:+64505440 None:intergenic
GTTGTTGCTGCTGTGGGTGT+TGG 0.436095 2.4:+64501289 None:intergenic
TTCCATCAGGCAAGCGATGC+GGG 0.436975 2.4:-64501770 MS.gene047966:CDS
ACTAGTCAATCAGAAGGTTA+TGG 0.441162 2.4:-64504357 MS.gene047966:CDS
TTCTCGCTTTGTCCGCCACT+AGG 0.442395 2.4:+64501973 None:intergenic
GGTATTGTTGCGGTGGTTGT+TGG 0.444138 2.4:+64505546 None:intergenic
GGTTACGCTGCTCCTCCTGC+TGG 0.445011 2.4:-64501357 MS.gene047966:CDS
GGAGGAGCCATGCCGTGTCC+TGG 0.452151 2.4:+64505578 None:intergenic
GGAAGTTATCCGGGGTATCC+TGG 0.454317 2.4:-64501315 MS.gene047966:CDS
TCAGAATTACAGATTGAATT+GGG 0.455422 2.4:-64504256 MS.gene047966:CDS
GATTGGGCCGCCCACATAGC+TGG 0.455583 2.4:+64505473 None:intergenic
CCGTAATATCCACCAGCAGC+AGG 0.455987 2.4:+64501408 None:intergenic
CTGATGAGGTCCGTACTCTC+TGG 0.456744 2.4:-64505421 MS.gene047966:CDS
AATTATCTATATACCTGCTT+CGG 0.457585 2.4:-64505368 MS.gene047966:CDS
ATTTGCTGTTGTTGCTGCTG+TGG 0.460723 2.4:+64501282 None:intergenic
TGCTGTGGGTGTTGGTAACC+AGG 0.462351 2.4:+64501297 None:intergenic
AACGAGCCCTAAAAGTCTCC+TGG 0.463019 2.4:+64504133 None:intergenic
CGGCATGGCTCCTCCCACCA+TGG 0.465301 2.4:-64505570 MS.gene047966:CDS
TTTGCTGTTGTTGCTGCTGT+GGG 0.468115 2.4:+64501283 None:intergenic
TGGTGAGAGGTCGTCGAGGC+AGG 0.473256 2.4:-64504220 MS.gene047966:CDS
GGATCGGTGATTTGCAGTAC+TGG 0.478598 2.4:-64505400 MS.gene047966:CDS
GCGCTGGCGGGCTGCTGAGG+AGG 0.479390 2.4:+64505443 None:intergenic
ACGCACTCCTTCAAACAAAC+AGG 0.483228 2.4:-64501551 MS.gene047966:intron
TCGGCTGAGTGGTGGCAGCC+GGG 0.484975 2.4:+64503938 None:intergenic
CAGCAGCAGGGTAACCACCC+TGG 0.488709 2.4:+64501421 None:intergenic
TCAACAAGACCCATGAGGAT+TGG 0.489460 2.4:-64503979 MS.gene047966:CDS
CAGGGTGGTTACCCTGCTGC+TGG 0.494399 2.4:-64501420 MS.gene047966:CDS
ACAAAATGTTCGCCTTTCAT+GGG 0.496313 2.4:-64501575 MS.gene047966:CDS
TGGATATTACGGCTATGCCC+AGG 0.498954 2.4:-64501397 MS.gene047966:CDS
CTGTAATTCTGACCACCATT+CGG 0.501561 2.4:+64504267 None:intergenic
CACAACAACCGCCAGCTATG+TGG 0.504918 2.4:-64505484 MS.gene047966:CDS
TTTGTGAGATTTGCTGATGA+GGG 0.506475 2.4:-64504045 MS.gene047966:CDS
GGTGGTTGTTGGCCCATGGT+GGG 0.509060 2.4:+64505557 None:intergenic
TGTTACTGATTACCTTCTCC+AGG 0.509993 2.4:-64504151 MS.gene047966:CDS
CATCAGGAGCTGTGCAGAAG+AGG 0.510016 2.4:-64501632 MS.gene047966:intron
TCTCGCTTTGTCCGCCACTA+GGG 0.510759 2.4:+64501974 None:intergenic
GCAGCCCGCCAGCGCTGATG+AGG 0.511476 2.4:-64505435 MS.gene047966:CDS
CCCTAAAAGTCTCCTGGAGA+AGG 0.518946 2.4:+64504139 None:intergenic
CTCGCCGGTGTTACCGAAGC+AGG 0.520914 2.4:+64505355 None:intergenic
GGATAACTTCCATACACATT+GGG 0.521577 2.4:+64501327 None:intergenic
AATGTGTATGGAAGTTATCC+GGG 0.521666 2.4:-64501324 MS.gene047966:CDS
CGGATAACTTCCATACACAT+TGG 0.523263 2.4:+64501326 None:intergenic
GGACAGGATCCCAATGTGTA+TGG 0.524626 2.4:-64501336 MS.gene047966:CDS
GCTGCTGTGGTGGTGGCTGT+TGG 0.525112 2.4:+64505525 None:intergenic
CGGTGGTTGTTGGCCCATGG+TGG 0.525587 2.4:+64505556 None:intergenic
GCTCGTTATAACTCTGTGAA+GGG 0.526741 2.4:-64504117 MS.gene047966:CDS
TTGCGGTGGTTGTTGGCCCA+TGG 0.528216 2.4:+64505553 None:intergenic
GGTGGTTACCCTGCTGCTGG+TGG 0.530682 2.4:-64501417 MS.gene047966:CDS
AATTGGGCAACTTTCAGTGC+TGG 0.533382 2.4:-64504240 MS.gene047966:CDS
AACCCGCATCGCTTGCCTGA+TGG 0.535712 2.4:+64501768 None:intergenic
CAGCAGCAACAACAGCAAAT+GGG 0.536514 2.4:-64501279 MS.gene047966:CDS
AGGCTTACTGGTAGGTCTAA+GGG 0.537077 2.4:-64504075 MS.gene047966:CDS
AGCAGCAGGGTAACCACCCT+GGG 0.537307 2.4:+64501422 None:intergenic
CACATAGCTGGCGGTTGTTG+TGG 0.538231 2.4:+64505485 None:intergenic
GTACATGTGAAGATTCCATC+AGG 0.542172 2.4:-64501783 MS.gene047966:CDS
AAGGAGTGCGTCCCCATGAA+AGG 0.543141 2.4:+64501563 None:intergenic
ACGGACCTCATCAGCGCTGG+CGG 0.545644 2.4:+64505430 None:intergenic
AGGTCGTCGAGGCAGGATGA+TGG 0.546691 2.4:-64504213 MS.gene047966:CDS
GGCTCGTTATAACTCTGTGA+AGG 0.546701 2.4:-64504118 MS.gene047966:CDS
GGTTGTTGGCCCATGGTGGG+AGG 0.549182 2.4:+64505560 None:intergenic
CGGACCTCATCAGCGCTGGC+GGG 0.550273 2.4:+64505431 None:intergenic
ACGTACGGCTGCTGTGGTGG+TGG 0.551079 2.4:+64505518 None:intergenic
ACATTGGGATCCTGTCCAGC+AGG 0.553089 2.4:+64501342 None:intergenic
AGTGGCAGGTCCAATCCTCA+TGG 0.559052 2.4:+64503969 None:intergenic
GGCATGGCTCCTCCCACCAT+GGG 0.562530 2.4:-64505569 MS.gene047966:CDS
GCAGGGTAACCACCCTGGGT+TGG 0.563661 2.4:+64501426 None:intergenic
CGTAATATCCACCAGCAGCA+GGG 0.575605 2.4:+64501409 None:intergenic
TTGAACGGAACTTTATTGGG+TGG 0.575973 2.4:-64501598 MS.gene047966:CDS
CGGTGATTTGCAGTACTGGA+TGG 0.577072 2.4:-64505396 MS.gene047966:CDS
ACAACAACCGCCAGCTATGT+GGG 0.578681 2.4:-64505483 MS.gene047966:CDS
GGGCTATGACTGAGATGCAA+GGG 0.579569 2.4:-64504011 MS.gene047966:CDS
AATCACCGATCCAGAGAGTA+CGG 0.579736 2.4:+64505411 None:intergenic
CCGAGAGAGATGATGCAACC+AGG 0.585288 2.4:-64505596 None:intergenic
AACTTGCCTCAGATGATCGT+CGG 0.588898 2.4:+64501827 None:intergenic
ATAATTCTCATAACCACCCT+GGG 0.588906 2.4:+64501380 None:intergenic
GGCTGTTGGTATTGTTGCGG+TGG 0.589555 2.4:+64505539 None:intergenic
TGATTGATAGGCTTACTGGT+AGG 0.591076 2.4:-64504083 MS.gene047966:CDS
CAACTTTCAGTGCTGGTGAG+AGG 0.591642 2.4:-64504233 MS.gene047966:CDS
CTCGTTATAACTCTGTGAAG+GGG 0.593138 2.4:-64504116 MS.gene047966:CDS
GGTGGCTGTTGGTATTGTTG+CGG 0.594122 2.4:+64505536 None:intergenic
AGTACGGACCTCATCAGCGC+TGG 0.598621 2.4:+64505427 None:intergenic
ATAACGTACGGCTGCTGTGG+TGG 0.602070 2.4:+64505515 None:intergenic
ATCATAACGTACGGCTGCTG+TGG 0.608287 2.4:+64505512 None:intergenic
CATAATTCTCATAACCACCC+TGG 0.609101 2.4:+64501379 None:intergenic
AAGCAAACTAGTCAATCAGA+AGG 0.612741 2.4:-64504363 MS.gene047966:CDS
AGAGTGCTTCTGACATACAA+TGG 0.615716 2.4:-64504300 MS.gene047966:CDS
GAGGTCCGTACTCTCTGGAT+CGG 0.617179 2.4:-64505416 MS.gene047966:CDS
GGATATTACGGCTATGCCCA+GGG 0.617872 2.4:-64501396 MS.gene047966:CDS
GCTGCCACCACTCAGCCGAA+AGG 0.617922 2.4:-64503934 MS.gene047966:intron
GTGGCAGGTCCAATCCTCAT+GGG 0.618279 2.4:+64503970 None:intergenic
ATAGCTGGCGGTTGTTGTGG+TGG 0.618727 2.4:+64505488 None:intergenic
CTGATGAGGGTGAACAGATG+AGG 0.619017 2.4:-64504032 MS.gene047966:CDS
CAAAATGTTCGCCTTTCATG+GGG 0.619064 2.4:-64501574 MS.gene047966:CDS
TCGTTATAACTCTGTGAAGG+GGG 0.622931 2.4:-64504115 MS.gene047966:CDS
CAAACCTTTCGGCTGAGTGG+TGG 0.624684 2.4:+64503930 None:intergenic
AGACAAACCTTTCGGCTGAG+TGG 0.626497 2.4:+64503927 None:intergenic
AGGGCTATGACTGAGATGCA+AGG 0.628733 2.4:-64504012 MS.gene047966:CDS
GAGATGATGCAACCAGGACA+CGG 0.629747 2.4:-64505590 MS.gene047966:CDS
AGAAAGATATTATACCTCGC+CGG 0.630596 2.4:+64505340 None:intergenic
ATGTCACCGACGATCATCTG+AGG 0.632855 2.4:-64501833 MS.gene047966:CDS
AATGGAACCATTATGCCGAA+TGG 0.635772 2.4:-64504282 MS.gene047966:CDS
TATACCTGCTTCGGTAACAC+CGG 0.640046 2.4:-64505359 MS.gene047966:CDS
GATGCAACCAGGACACGGCA+TGG 0.642660 2.4:-64505585 MS.gene047966:CDS
GGGCTGCTGAGGAGGCTGAG+CGG 0.642669 2.4:+64505451 None:intergenic
TTGGGATCCTGTCCAGCAGG+AGG 0.643700 2.4:+64501345 None:intergenic
GGAACCATTATGCCGAATGG+TGG 0.645643 2.4:-64504279 MS.gene047966:CDS
ATTCCATCAGGCAAGCGATG+CGG 0.646516 2.4:-64501771 MS.gene047966:CDS
GACTCAACAAGATCCAACCC+AGG 0.647131 2.4:-64501439 MS.gene047966:CDS
TGGGCCGCCCACATAGCTGG+CGG 0.657827 2.4:+64505476 None:intergenic
TGATGAGGGTGAACAGATGA+GGG 0.661600 2.4:-64504031 MS.gene047966:CDS
GGCTATGACTGAGATGCAAG+GGG 0.668121 2.4:-64504010 MS.gene047966:CDS
TGTGGTGGCATCATAACGTA+CGG 0.676809 2.4:+64505503 None:intergenic
TGTTGGTAACCAGGATACCC+CGG 0.677241 2.4:+64501306 None:intergenic
ACAACCGCCAGCTATGTGGG+CGG 0.687665 2.4:-64505480 MS.gene047966:CDS
GTGCTGGTGAGAGGTCGTCG+AGG 0.694460 2.4:-64504224 MS.gene047966:CDS
TTTGTTCAACAAGACCCATG+AGG 0.696574 2.4:-64503984 MS.gene047966:CDS
ACTCAACAAGATCCAACCCA+GGG 0.701733 2.4:-64501438 MS.gene047966:CDS
GCAGCTTCGTATAACCCTAG+TGG 0.702417 2.4:-64501988 MS.gene047966:intron
GCTTCGTATAACCCTAGTGG+CGG 0.705338 2.4:-64501985 MS.gene047966:CDS
ATGTGTATGGAAGTTATCCG+GGG 0.708244 2.4:-64501323 MS.gene047966:CDS
CAACAAGATCCAACCCAGGG+TGG 0.719050 2.4:-64501435 MS.gene047966:CDS
CTGCTTCGGTAACACCGGCG+AGG 0.749783 2.4:-64505354 MS.gene047966:intron
TATTACGGCTATGCCCAGGG+TGG 0.766971 2.4:-64501393 MS.gene047966:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATTTTAATTTATAT+TGG - chr2.4:64504527-64504546 MS.gene047966:intron 0.0%
!!! AAATTAGATTTTGTAATTTT+GGG - chr2.4:64501899-64501918 MS.gene047966:intron 10.0%
!!! AATTTTCCTTTAAAAAAATT+GGG - chr2.4:64503185-64503204 MS.gene047966:intron 10.0%
!!! TAATTGTTTTTACTTTTTAA+AGG - chr2.4:64503836-64503855 MS.gene047966:intron 10.0%
!!! TTTTTTTATTGATTGATTAT+TGG - chr2.4:64501602-64501621 MS.gene047966:CDS 10.0%
!! ACTATTTATTTAATAACCAA+AGG + chr2.4:64504760-64504779 None:intergenic 15.0%
!!! AGTGTTATTTTTTTATTTGA+TGG - chr2.4:64504601-64504620 MS.gene047966:intron 15.0%
!!! ATCCAATAATTTTTAAGTAA+AGG - chr2.4:64504135-64504154 MS.gene047966:CDS 15.0%
!!! CAATTTTCCTTTAAAAAAAT+TGG - chr2.4:64503184-64503203 MS.gene047966:intron 15.0%
!!! GAAATTAGATTTTGTAATTT+TGG - chr2.4:64501898-64501917 MS.gene047966:intron 15.0%
!!! TGTATTGAATTTGATTTATA+TGG - chr2.4:64504498-64504517 MS.gene047966:intron 15.0%
!! AAATATATGAGAAGAATAAG+AGG + chr2.4:64503709-64503728 None:intergenic 20.0%
!! ATTATTCTGTTAGTGAAATT+TGG - chr2.4:64502421-64502440 MS.gene047966:intron 20.0%
!! GTCCTTTACTTAAAAATTAT+TGG + chr2.4:64504140-64504159 None:intergenic 20.0%
!! TGAAATAAATAAACATTTGC+TGG + chr2.4:64503635-64503654 None:intergenic 20.0%
!! TTAAATTGATAGAAGAGTAA+AGG - chr2.4:64504216-64504235 MS.gene047966:CDS 20.0%
!! TTATCCTATTTGTGAAATTA+GGG - chr2.4:64501837-64501856 MS.gene047966:CDS 20.0%
!! TTATTCTGTTAGTGAAATTT+GGG - chr2.4:64502422-64502441 MS.gene047966:intron 20.0%
!! TTTATCCTATTTGTGAAATT+AGG - chr2.4:64501836-64501855 MS.gene047966:CDS 20.0%
!!! AAATTAGGGTGTTTTAATTT+TGG - chr2.4:64501754-64501773 MS.gene047966:CDS 20.0%
!!! AAATTTGGGTTTTGAAATTT+TGG - chr2.4:64502383-64502402 MS.gene047966:intron 20.0%
!!! AGCTGTTTTTAAAACTATAT+CGG - chr2.4:64502133-64502152 MS.gene047966:intron 20.0%
!!! ATCTCAACATTTTTTTCTTA+TGG + chr2.4:64503674-64503693 None:intergenic 20.0%
!!! ATTTAGCCCAATTTTTTTAA+AGG + chr2.4:64503194-64503213 None:intergenic 20.0%
!!! CAATTTTCACAATCTTTTTT+TGG + chr2.4:64502177-64502196 None:intergenic 20.0%
!!! GAAATTAGGGTTTTTAATTT+TGG - chr2.4:64501802-64501821 MS.gene047966:CDS 20.0%
!!! GTTTAAGTTATGATTCTTTT+CGG - chr2.4:64503119-64503138 MS.gene047966:intron 20.0%
!!! TCTTTCATTATTCTAAAACA+GGG + chr2.4:64504298-64504317 None:intergenic 20.0%
!!! TTATTCTGTTTTTGAAAGTA+GGG - chr2.4:64502320-64502339 MS.gene047966:intron 20.0%
!!! TTATTTTGTTAGTGAAATCA+GGG - chr2.4:64501933-64501952 MS.gene047966:intron 20.0%
!!! TTTATTCTGTTTTTGAAAGT+AGG - chr2.4:64502319-64502338 MS.gene047966:intron 20.0%
!!! TTTATTTTGTTAGTGAAATC+AGG - chr2.4:64501932-64501951 MS.gene047966:intron 20.0%
!!! TTTTCATTGTAGATTTTTGT+TGG - chr2.4:64504986-64505005 MS.gene047966:intron 20.0%
!!! TTTTTTTAAAGGAAAATTGC+AGG + chr2.4:64503183-64503202 None:intergenic 20.0%
!!! TTTTTTTATTTGATGGTTTC+CGG - chr2.4:64504608-64504627 MS.gene047966:intron 20.0%
! AAAACCCTAATTTCACAAAT+AGG + chr2.4:64501844-64501863 None:intergenic 25.0%
! AAAATGCCGCAAAAATATAA+CGG + chr2.4:64503379-64503398 None:intergenic 25.0%
! AACCAATAGGAGTAAATTAA+AGG + chr2.4:64503521-64503540 None:intergenic 25.0%
! AATGTAAATAAGATCTGCTT+TGG + chr2.4:64503592-64503611 None:intergenic 25.0%
! AATTATCTATATACCTGCTT+CGG - chr2.4:64501488-64501507 MS.gene047966:intron 25.0%
! AGAGTAAAAACTAAACCAAA+AGG + chr2.4:64503438-64503457 None:intergenic 25.0%
! AGTTCTTAAGAAAAACCAAT+AGG + chr2.4:64503534-64503553 None:intergenic 25.0%
! ATACACTACAAAAGGTAATT+TGG + chr2.4:64503086-64503105 None:intergenic 25.0%
! CAAATTCAATACATAGTTGT+CGG + chr2.4:64504491-64504510 None:intergenic 25.0%
! CTCTCTTAATTGTAGAATTA+GGG - chr2.4:64501539-64501558 MS.gene047966:intron 25.0%
! TAAATAAATAGTTGCACCTT+TGG - chr2.4:64504741-64504760 MS.gene047966:intron 25.0%
! TATATTACCTGTTTGTTTGA+AGG + chr2.4:64505315-64505334 None:intergenic 25.0%
! TCAGAATTACAGATTGAATT+GGG - chr2.4:64502600-64502619 MS.gene047966:intron 25.0%
! TCTCTCTTAATTGTAGAATT+AGG - chr2.4:64501538-64501557 MS.gene047966:intron 25.0%
! TTATCCTGTTTGTGAAATTA+GGG - chr2.4:64501789-64501808 MS.gene047966:CDS 25.0%
! TTATGCTGTTCGTAAAATTT+GGG - chr2.4:64502369-64502388 MS.gene047966:intron 25.0%
! TTTATCCTGTTTGTGAAATT+AGG - chr2.4:64501788-64501807 MS.gene047966:CDS 25.0%
! TTTATGCTGTTCGTAAAATT+TGG - chr2.4:64502368-64502387 MS.gene047966:intron 25.0%
! TTTATTCTGCTAGTGAATTT+AGG - chr2.4:64501649-64501668 MS.gene047966:intron 25.0%
!! AGTAAAGGTATATCCAAATA+AGG - chr2.4:64504231-64504250 MS.gene047966:CDS 25.0%
!! ATGTTGGTTAGTTGAATTTA+AGG - chr2.4:64503051-64503070 MS.gene047966:intron 25.0%
!! TATTTTGTTAGTGAAATCAG+GGG - chr2.4:64501934-64501953 MS.gene047966:intron 25.0%
!! TCAAACATTTTCAGACTTAA+AGG + chr2.4:64503762-64503781 None:intergenic 25.0%
!! TTGATTATTGGTGTAAGTTT+TGG - chr2.4:64501614-64501633 MS.gene047966:CDS 25.0%
!!! AAAGTAGGGTATTGTAATTT+TGG - chr2.4:64502334-64502353 MS.gene047966:intron 25.0%
!!! AACATTTTTTTCTTATGGAC+GGG + chr2.4:64503669-64503688 None:intergenic 25.0%
!!! AAGTGACTAATTTGATTTTC+TGG - chr2.4:64504344-64504363 MS.gene047966:CDS 25.0%
!!! AGTGACTAATTTGATTTTCT+GGG - chr2.4:64504345-64504364 MS.gene047966:CDS 25.0%
!!! CAACATTTTTTTCTTATGGA+CGG + chr2.4:64503670-64503689 None:intergenic 25.0%
!!! CTCTTTCATTATTCTAAAAC+AGG + chr2.4:64504299-64504318 None:intergenic 25.0%
!!! CTGTTTTAGAATAATGAAAG+AGG - chr2.4:64504297-64504316 MS.gene047966:CDS 25.0%
!!! CTTTCATTATTCTAAAACAG+GGG + chr2.4:64504297-64504316 None:intergenic 25.0%
!!! GTATTGTAATTTTGGTTTGT+AGG - chr2.4:64502342-64502361 MS.gene047966:intron 25.0%
AAAACCCTAATTTCACAAAC+AGG + chr2.4:64501796-64501815 None:intergenic 30.0%
AAAAGGTAATTTGGTACACA+AGG + chr2.4:64503077-64503096 None:intergenic 30.0%
AAAATCACAAAGTGATACAC+AGG + chr2.4:64504397-64504416 None:intergenic 30.0%
AAATGCCGCAAAAATATAAC+GGG + chr2.4:64503378-64503397 None:intergenic 30.0%
AATAAGCAGTTTATCCAAAC+AGG + chr2.4:64502012-64502031 None:intergenic 30.0%
AATATTACCTGTCCGAAAAT+TGG + chr2.4:64505117-64505136 None:intergenic 30.0%
AGATGAATTCAAACAGCTTA+TGG + chr2.4:64503880-64503899 None:intergenic 30.0%
AGTTTGATGTGATGAATTTG+TGG - chr2.4:64504426-64504445 MS.gene047966:intron 30.0%
ATGTACTAGTTCACCATATT+GGG + chr2.4:64505059-64505078 None:intergenic 30.0%
CTTACTAATATGTGTGATGT+TGG - chr2.4:64503035-64503054 MS.gene047966:intron 30.0%
GAGGAACAAATAAGAATAAG+AGG + chr2.4:64503740-64503759 None:intergenic 30.0%
GATAGAGATGATCAATTTCA+TGG - chr2.4:64503790-64503809 MS.gene047966:intron 30.0%
GGCTAACATATAACCTTATT+TGG + chr2.4:64504247-64504266 None:intergenic 30.0%
GTCAGAATTACAGATTGAAT+TGG - chr2.4:64502599-64502618 MS.gene047966:intron 30.0%
GTTTGATGTGATGAATTTGT+GGG - chr2.4:64504427-64504446 MS.gene047966:intron 30.0%
TAAAACACCCTAATTTCTCA+AGG + chr2.4:64501750-64501769 None:intergenic 30.0%
TATATGAGAGACAAACCTTT+CGG + chr2.4:64502940-64502959 None:intergenic 30.0%
TATTCGTCATAATTCACAGT+TGG + chr2.4:64503998-64504017 None:intergenic 30.0%
TCACAGCAAGCAAATATTTA+GGG + chr2.4:64504682-64504701 None:intergenic 30.0%
TGACAAGAACTTGAAAATGT+AGG + chr2.4:64503410-64503429 None:intergenic 30.0%
TGTATCATTCGTATGATAGA+TGG + chr2.4:64504112-64504131 None:intergenic 30.0%
TTCACAGCAAGCAAATATTT+AGG + chr2.4:64504683-64504702 None:intergenic 30.0%
! AACATTTTCAGACTTAAAGG+AGG + chr2.4:64503759-64503778 None:intergenic 30.0%
! CTCCTTTAATTTACTCCTAT+TGG - chr2.4:64503516-64503535 MS.gene047966:intron 30.0%
! TGGTTTTTATCTGTGTGTAA+AGG - chr2.4:64503810-64503829 MS.gene047966:intron 30.0%
! TTTCTTTTATATGACTGCCA+TGG - chr2.4:64504026-64504045 MS.gene047966:CDS 30.0%
!! GTGACTAATTTGATTTTCTG+GGG - chr2.4:64504346-64504365 MS.gene047966:CDS 30.0%
!!! AATTAGGGCTTTATTTTGTG+TGG - chr2.4:64501554-64501573 MS.gene047966:CDS 30.0%
!!! GAAATCAGGGGTTTTAATTT+TGG - chr2.4:64501946-64501965 MS.gene047966:intron 30.0%
!!! GTAGGGTTTTAGATAAAGAT+GGG - chr2.4:64503957-64503976 MS.gene047966:CDS 30.0%
!!! TACCATTTTTGTTGGTGATT+TGG - chr2.4:64502675-64502694 MS.gene047966:intron 30.0%
!!! TAGGGTTTTAGATAAAGATG+GGG - chr2.4:64503958-64503977 MS.gene047966:CDS 30.0%
AAGCAAACTAGTCAATCAGA+AGG - chr2.4:64502493-64502512 MS.gene047966:intron 35.0%
AATGTGTATGGAAGTTATCC+GGG - chr2.4:64505532-64505551 MS.gene047966:CDS 35.0%
ACAAAATGTTCGCCTTTCAT+GGG - chr2.4:64505281-64505300 MS.gene047966:intron 35.0%
ACAAGTACCTCACATTGTAT+TGG + chr2.4:64504190-64504209 None:intergenic 35.0%
ACATATAACTGACCTAAGCA+AGG + chr2.4:64503346-64503365 None:intergenic 35.0%
ACTAGTCAATCAGAAGGTTA+TGG - chr2.4:64502499-64502518 MS.gene047966:intron 35.0%
AGAAAGATATTATACCTCGC+CGG + chr2.4:64501519-64501538 None:intergenic 35.0%
AGCCAAATCACCAACAAAAA+TGG + chr2.4:64502680-64502699 None:intergenic 35.0%
ATAATTCTCATAACCACCCT+GGG + chr2.4:64505479-64505498 None:intergenic 35.0%
ATGTTTGTTCTGCTGCATAA+TGG - chr2.4:64502987-64503006 MS.gene047966:intron 35.0%
CAAGAACTTGAAAATGTAGG+CGG + chr2.4:64503407-64503426 None:intergenic 35.0%
CAAGTACCTCACATTGTATT+GGG + chr2.4:64504189-64504208 None:intergenic 35.0%
CAATCCTAACAGATCCTATT+GGG - chr2.4:64502269-64502288 MS.gene047966:intron 35.0%
CAATGTGTATGGAAGTTATC+CGG - chr2.4:64505531-64505550 MS.gene047966:CDS 35.0%
CAGCTTATGGTATAATGCAT+AGG + chr2.4:64503867-64503886 None:intergenic 35.0%
CATGTACTAGTTCACCATAT+TGG + chr2.4:64505060-64505079 None:intergenic 35.0%
CATTCAGCATACACTACAAA+AGG + chr2.4:64503094-64503113 None:intergenic 35.0%
CCAACAAAAATGGTATGATC+AGG + chr2.4:64502670-64502689 None:intergenic 35.0%
CGCTCTTATCATATAAGCAA+CGG - chr2.4:64502048-64502067 MS.gene047966:intron 35.0%
GATTCCCAATTTGAAAACCA+TGG + chr2.4:64504046-64504065 None:intergenic 35.0%
GCACGGTCATTAAAAAGATT+TGG + chr2.4:64505386-64505405 None:intergenic 35.0%
GCTCTTATCATATAAGCAAC+GGG - chr2.4:64502049-64502068 MS.gene047966:intron 35.0%
GGAGTAAATTAAAGGAGCAA+AGG + chr2.4:64503513-64503532 None:intergenic 35.0%
GGATAACTTCCATACACATT+GGG + chr2.4:64505532-64505551 None:intergenic 35.0%
TAACAGATCCTATTGGGATA+AGG - chr2.4:64502275-64502294 MS.gene047966:intron 35.0%
TAACCTACCCTTGTAATTCT+GGG - chr2.4:64505336-64505355 MS.gene047966:intron 35.0%
TCAGCATGACTGATCTAAAA+GGG + chr2.4:64503933-64503952 None:intergenic 35.0%
TCCTGATGCAAGAAAAATGA+AGG + chr2.4:64505212-64505231 None:intergenic 35.0%
TGTTACAATTTGCAGAAGAC+AGG + chr2.4:64504462-64504481 None:intergenic 35.0%
TTAACCTACCCTTGTAATTC+TGG - chr2.4:64505335-64505354 MS.gene047966:intron 35.0%
TTATCCCAATAGGATCTGTT+AGG + chr2.4:64502276-64502295 None:intergenic 35.0%
TTCAGCATGACTGATCTAAA+AGG + chr2.4:64503934-64503953 None:intergenic 35.0%
! ACTGCCATGGTTTTCAAATT+GGG - chr2.4:64504039-64504058 MS.gene047966:CDS 35.0%
! ATTCACTCTGGTGCTAATTT+GGG + chr2.4:64501716-64501735 None:intergenic 35.0%
! GTAGATTTTTGTTGGCAACT+TGG - chr2.4:64504994-64505013 MS.gene047966:intron 35.0%
! TGACTTACATTTTCTTGCAC+CGG + chr2.4:64504630-64504649 None:intergenic 35.0%
! TGTTAGGATTGGCATATTTG+AGG + chr2.4:64502260-64502279 None:intergenic 35.0%
!! CCTGATCATACCATTTTTGT+TGG - chr2.4:64502667-64502686 MS.gene047966:intron 35.0%
!! GTTTGCCCGTTATATTTTTG+CGG - chr2.4:64503370-64503389 MS.gene047966:intron 35.0%
!! TTTGTGAGATTTGCTGATGA+GGG - chr2.4:64502811-64502830 MS.gene047966:intron 35.0%
!!! AGGGTTTTAGATAAAGATGG+GGG - chr2.4:64503959-64503978 MS.gene047966:CDS 35.0%
!!! CGTAGGGTTTTAGATAAAGA+TGG - chr2.4:64503956-64503975 MS.gene047966:CDS 35.0%
!!! GGGGTTTTAATTTTGGTTTG+TGG - chr2.4:64501953-64501972 MS.gene047966:intron 35.0%
!!! TGGTGTAAGTTTTGGTGTTA+AGG - chr2.4:64501622-64501641 MS.gene047966:CDS 35.0%
!!! TTTTGTGAGATTTGCTGATG+AGG - chr2.4:64502810-64502829 MS.gene047966:intron 35.0%
AAACCAGCCCAGAATTACAA+GGG + chr2.4:64505346-64505365 None:intergenic 40.0%
AATGGAACCATTATGCCGAA+TGG - chr2.4:64502574-64502593 MS.gene047966:intron 40.0%
ACCTGAGACCTTGAGAAATT+AGG - chr2.4:64501739-64501758 MS.gene047966:intron 40.0%
ACCTGCCACTAATAAAAACC+CGG - chr2.4:64502900-64502919 MS.gene047966:intron 40.0%
AGCAAGGACATGCACTAAAA+TGG + chr2.4:64503330-64503349 None:intergenic 40.0%
AGTACGCACAGTTGTGTTAT+TGG + chr2.4:64504914-64504933 None:intergenic 40.0%
ATAAGATCTGCTTTGGCACA+AGG + chr2.4:64503585-64503604 None:intergenic 40.0%
ATGTGTATGGAAGTTATCCG+GGG - chr2.4:64505533-64505552 MS.gene047966:CDS 40.0%
CAAAATGTTCGCCTTTCATG+GGG - chr2.4:64505282-64505301 MS.gene047966:intron 40.0%
CAACCAAACCTTATCCCAAT+AGG + chr2.4:64502286-64502305 None:intergenic 40.0%
CAGGGTGGTTATGAGAATTA+TGG - chr2.4:64505478-64505497 MS.gene047966:CDS 40.0%
CATAATTCTCATAACCACCC+TGG + chr2.4:64505480-64505499 None:intergenic 40.0%
CCAATAGGATCTGTTAGGAT+TGG + chr2.4:64502271-64502290 None:intergenic 40.0%
CCAATCCTAACAGATCCTAT+TGG - chr2.4:64502268-64502287 MS.gene047966:intron 40.0%
CCTGAGACCTTGAGAAATTA+GGG - chr2.4:64501740-64501759 MS.gene047966:intron 40.0%
CGGATAACTTCCATACACAT+TGG + chr2.4:64505533-64505552 None:intergenic 40.0%
CTCGTTATAACTCTGTGAAG+GGG - chr2.4:64502740-64502759 MS.gene047966:intron 40.0%
CTGTAATTCTGACCACCATT+CGG + chr2.4:64502592-64502611 None:intergenic 40.0%
CTGTTTACCAATCGCACTTA+GGG - chr2.4:64501986-64502005 MS.gene047966:CDS 40.0%
GACAAAATGTTCGCCTTTCA+TGG - chr2.4:64505280-64505299 MS.gene047966:intron 40.0%
GATCCTATTGGGATAAGGTT+TGG - chr2.4:64502280-64502299 MS.gene047966:intron 40.0%
GCTCGTTATAACTCTGTGAA+GGG - chr2.4:64502739-64502758 MS.gene047966:intron 40.0%
GGGAAAAAGTGAGCAATTGA+TGG + chr2.4:64503913-64503932 None:intergenic 40.0%
GTACATGTGAAGATTCCATC+AGG - chr2.4:64505073-64505092 MS.gene047966:intron 40.0%
GTTGTGATTGATAGGCTTAC+TGG - chr2.4:64502769-64502788 MS.gene047966:intron 40.0%
TAAGATCTGCTTTGGCACAA+GGG + chr2.4:64503584-64503603 None:intergenic 40.0%
TCGTTATAACTCTGTGAAGG+GGG - chr2.4:64502741-64502760 MS.gene047966:intron 40.0%
TCTGTTTACCAATCGCACTT+AGG - chr2.4:64501985-64502004 MS.gene047966:CDS 40.0%
TGACTCAGAAGCAACAGAAT+GGG + chr2.4:64504656-64504675 None:intergenic 40.0%
TGAGTCTGAGAACAAAAGCA+CGG + chr2.4:64505403-64505422 None:intergenic 40.0%
TGATTGATAGGCTTACTGGT+AGG - chr2.4:64502773-64502792 MS.gene047966:intron 40.0%
TTACCTCCCAATACAATGTG+AGG - chr2.4:64504180-64504199 MS.gene047966:CDS 40.0%
TTTAGTGCATGTCCTTGCTT+AGG - chr2.4:64503331-64503350 MS.gene047966:intron 40.0%
TTTCAGCTGAAATCAGTTCC+AGG + chr2.4:64503301-64503320 None:intergenic 40.0%
TTTGTTCAACAAGACCCATG+AGG - chr2.4:64502872-64502891 MS.gene047966:intron 40.0%
! AGAGTGCTTCTGACATACAA+TGG - chr2.4:64502556-64502575 MS.gene047966:intron 40.0%
! AGGCAAGTTTTCACCCAATA+TGG - chr2.4:64505043-64505062 MS.gene047966:intron 40.0%
! ATGCGGGTTTGTCCAATTTT+CGG - chr2.4:64505102-64505121 MS.gene047966:intron 40.0%
! GACTGCCATGGTTTTCAAAT+TGG - chr2.4:64504038-64504057 MS.gene047966:CDS 40.0%
! GATTCACTCTGGTGCTAATT+TGG + chr2.4:64501717-64501736 None:intergenic 40.0%
! GCATATTTGAGGTTATCGAC+TGG + chr2.4:64502249-64502268 None:intergenic 40.0%
! GGAACTGATTTCAGCTGAAA+TGG - chr2.4:64503301-64503320 MS.gene047966:intron 40.0%
! GTACGCACAGTTGTGTTATT+GGG + chr2.4:64504913-64504932 None:intergenic 40.0%
! TGTTACTGATTACCTTCTCC+AGG - chr2.4:64502705-64502724 MS.gene047966:intron 40.0%
! TTGCTGTGAATTTTGCCAAC+GGG - chr2.4:64504693-64504712 MS.gene047966:intron 40.0%
!! CTTGCTGTGAATTTTGCCAA+CGG - chr2.4:64504692-64504711 MS.gene047966:intron 40.0%
!! GAGGCAATACGTGTTTTGAA+CGG - chr2.4:64505243-64505262 MS.gene047966:intron 40.0%
!! GCCTTCATTTTTCTTGCATC+AGG - chr2.4:64505208-64505227 MS.gene047966:intron 40.0%
!! GTTCTTGTCATTTCGCCTTT+TGG - chr2.4:64503420-64503439 MS.gene047966:intron 40.0%
!!! TTTTGTTGGTGATTTGGCTG+CGG - chr2.4:64502681-64502700 MS.gene047966:intron 40.0%
AACTCCTGTTGTCTCAAAGC+AGG - chr2.4:64503248-64503267 MS.gene047966:intron 45.0%
AACTTGCCTCAGATGATCGT+CGG + chr2.4:64505032-64505051 None:intergenic 45.0%
AATCACCGATCCAGAGAGTA+CGG + chr2.4:64501448-64501467 None:intergenic 45.0%
AATTGGGCAACTTTCAGTGC+TGG - chr2.4:64502616-64502635 MS.gene047966:intron 45.0%
ACAGCAGCAACAACAGCAAA+TGG - chr2.4:64505576-64505595 MS.gene047966:CDS 45.0%
ACGCACTCCTTCAAACAAAC+AGG - chr2.4:64505305-64505324 MS.gene047966:intron 45.0%
ACTCAACAAGATCCAACCCA+GGG - chr2.4:64505418-64505437 MS.gene047966:CDS 45.0%
ACTCCTGTTGTCTCAAAGCA+GGG - chr2.4:64503249-64503268 MS.gene047966:intron 45.0%
ACTGGTAGGTCTAAGGGATA+TGG - chr2.4:64502787-64502806 MS.gene047966:intron 45.0%
AGATGATCGTCGGTGACATT+TGG + chr2.4:64505022-64505041 None:intergenic 45.0%
AGGCTTACTGGTAGGTCTAA+GGG - chr2.4:64502781-64502800 MS.gene047966:intron 45.0%
ATCAGTCATGCTGAAGTCGT+AGG - chr2.4:64503939-64503958 MS.gene047966:CDS 45.0%
ATTGCAGGAAGAAACGACTG+TGG + chr2.4:64503168-64503187 None:intergenic 45.0%
CAAACCAGCCCAGAATTACA+AGG + chr2.4:64505347-64505366 None:intergenic 45.0%
CAGCAGCAACAACAGCAAAT+GGG - chr2.4:64505577-64505596 MS.gene047966:CDS 45.0%
CCCTAATTTCTCAAGGTCTC+AGG + chr2.4:64501743-64501762 None:intergenic 45.0%
CTGACTCAGAAGCAACAGAA+TGG + chr2.4:64504657-64504676 None:intergenic 45.0%
GGAGCAAAGGCTATGAATGA+TGG + chr2.4:64503500-64503519 None:intergenic 45.0%
GGCTCGTTATAACTCTGTGA+AGG - chr2.4:64502738-64502757 MS.gene047966:intron 45.0%
GGGCGAAAGTTGTGATTGAT+AGG - chr2.4:64502761-64502780 MS.gene047966:intron 45.0%
GTACCTCACATTGTATTGGG+AGG + chr2.4:64504186-64504205 None:intergenic 45.0%
TAACCAACTGATGTGCTGCA+TGG - chr2.4:64504269-64504288 MS.gene047966:CDS 45.0%
TAGGCTTACTGGTAGGTCTA+AGG - chr2.4:64502780-64502799 MS.gene047966:intron 45.0%
TATACCTGCTTCGGTAACAC+CGG - chr2.4:64501497-64501516 MS.gene047966:intron 45.0%
TCAACAAGACCCATGAGGAT+TGG - chr2.4:64502877-64502896 MS.gene047966:intron 45.0%
TCAGTCATGCTGAAGTCGTA+GGG - chr2.4:64503940-64503959 MS.gene047966:CDS 45.0%
TGATGAGGGTGAACAGATGA+GGG - chr2.4:64502825-64502844 MS.gene047966:intron 45.0%
TGGACGGAAAATCTTCACGA+GGG + chr2.4:64503148-64503167 None:intergenic 45.0%
TGTGGTGGCATCATAACGTA+CGG + chr2.4:64501356-64501375 None:intergenic 45.0%
! ACCTTCTCCAGGAGACTTTT+AGG - chr2.4:64502716-64502735 MS.gene047966:intron 45.0%
! ACTCTGGTGCTAATTTGGGT+GGG + chr2.4:64501712-64501731 None:intergenic 45.0%
! CCTTCTCCAGGAGACTTTTA+GGG - chr2.4:64502717-64502736 MS.gene047966:intron 45.0%
! GGTTTGTCCAATTTTCGGAC+AGG - chr2.4:64505107-64505126 MS.gene047966:intron 45.0%
! TGCTGTGAATTTTGCCAACG+GGG - chr2.4:64504694-64504713 MS.gene047966:intron 45.0%
!! ATTTGCTGTTGTTGCTGCTG+TGG + chr2.4:64505577-64505596 None:intergenic 45.0%
!! TTTGCTGTTGTTGCTGCTGT+GGG + chr2.4:64505576-64505595 None:intergenic 45.0%
AAACAGGCCCTAAGTGCGAT+TGG + chr2.4:64501996-64502015 None:intergenic 50.0%
AACGAGCCCTAAAAGTCTCC+TGG + chr2.4:64502726-64502745 None:intergenic 50.0%
AATCGCACTTAGGGCCTGTT+TGG - chr2.4:64501995-64502014 MS.gene047966:intron 50.0%
ACAACAACCGCCAGCTATGT+GGG - chr2.4:64501373-64501392 MS.gene047966:CDS 50.0%
ACAGTACAACAAGTCCCCGT+TGG + chr2.4:64504711-64504730 None:intergenic 50.0%
AGACAAACCTTTCGGCTGAG+TGG + chr2.4:64502932-64502951 None:intergenic 50.0%
AGGGCTATGACTGAGATGCA+AGG - chr2.4:64502844-64502863 MS.gene047966:intron 50.0%
ATCATAACGTACGGCTGCTG+TGG + chr2.4:64501347-64501366 None:intergenic 50.0%
ATGTCACCGACGATCATCTG+AGG - chr2.4:64505023-64505042 MS.gene047966:intron 50.0%
ATTCCATCAGGCAAGCGATG+CGG - chr2.4:64505085-64505104 MS.gene047966:intron 50.0%
CAGCCCAGAATTACAAGGGT+AGG + chr2.4:64505342-64505361 None:intergenic 50.0%
CAGGAAGAAACGACTGTGGA+CGG + chr2.4:64503164-64503183 None:intergenic 50.0%
CCCTAAAAGTCTCCTGGAGA+AGG + chr2.4:64502720-64502739 None:intergenic 50.0%
CGTAATATCCACCAGCAGCA+GGG + chr2.4:64505450-64505469 None:intergenic 50.0%
CTACCCTTGTAATTCTGGGC+TGG - chr2.4:64505340-64505359 MS.gene047966:intron 50.0%
CTGACCACCATTCGGCATAA+TGG + chr2.4:64502584-64502603 None:intergenic 50.0%
CTGATGAGGGTGAACAGATG+AGG - chr2.4:64502824-64502843 MS.gene047966:intron 50.0%
GACTCAACAAGATCCAACCC+AGG - chr2.4:64505417-64505436 MS.gene047966:CDS 50.0%
GATCCATGCAGCACATCAGT+TGG + chr2.4:64504275-64504294 None:intergenic 50.0%
GCAGCACATCAGTTGGTTAC+TGG + chr2.4:64504268-64504287 None:intergenic 50.0%
GCAGCTTCGTATAACCCTAG+TGG - chr2.4:64504868-64504887 MS.gene047966:intron 50.0%
GCTTCGTATAACCCTAGTGG+CGG - chr2.4:64504871-64504890 MS.gene047966:intron 50.0%
GGAACCATTATGCCGAATGG+TGG - chr2.4:64502577-64502596 MS.gene047966:intron 50.0%
GGACAGGATCCCAATGTGTA+TGG - chr2.4:64505520-64505539 MS.gene047966:CDS 50.0%
GGATATTACGGCTATGCCCA+GGG - chr2.4:64505460-64505479 MS.gene047966:CDS 50.0%
GGCTATGACTGAGATGCAAG+GGG - chr2.4:64502846-64502865 MS.gene047966:intron 50.0%
GGGCTATGACTGAGATGCAA+GGG - chr2.4:64502845-64502864 MS.gene047966:intron 50.0%
GGTATTGTTGCGGTGGTTGT+TGG + chr2.4:64501313-64501332 None:intergenic 50.0%
GGTGGCTGTTGGTATTGTTG+CGG + chr2.4:64501323-64501342 None:intergenic 50.0%
GTCAAGAGGCTCTGTCATCT+CGG - chr2.4:64503273-64503292 MS.gene047966:intron 50.0%
GTCTCAGGTTCGATTCACTC+TGG + chr2.4:64501728-64501747 None:intergenic 50.0%
GTGGACGGAAAATCTTCACG+AGG + chr2.4:64503149-64503168 None:intergenic 50.0%
TGGATATTACGGCTATGCCC+AGG - chr2.4:64505459-64505478 MS.gene047966:CDS 50.0%
TTGACCCATGATTGACTGCG+TGG - chr2.4:64504369-64504388 MS.gene047966:CDS 50.0%
! CACTCTGGTGCTAATTTGGG+TGG + chr2.4:64501713-64501732 None:intergenic 50.0%
! CCTGCTGCTGGTGGATATTA+CGG - chr2.4:64505448-64505467 MS.gene047966:CDS 50.0%
! CGGTGATTTGCAGTACTGGA+TGG - chr2.4:64501460-64501479 MS.gene047966:intron 50.0%
! GCCGGGTTTTTATTAGTGGC+AGG + chr2.4:64502904-64502923 None:intergenic 50.0%
! GGATCGGTGATTTGCAGTAC+TGG - chr2.4:64501456-64501475 MS.gene047966:intron 50.0%
! GGCAGCCGGGTTTTTATTAG+TGG + chr2.4:64502908-64502927 None:intergenic 50.0%
! TCTCAAAGCAGGGTGTCAAG+AGG - chr2.4:64503259-64503278 MS.gene047966:intron 50.0%
!! ACACCCTGCTTTGAGACAAC+AGG + chr2.4:64503255-64503274 None:intergenic 50.0%
!! CAACTTTCAGTGCTGGTGAG+AGG - chr2.4:64502623-64502642 MS.gene047966:intron 50.0%
!! TGTTGGTAACCAGGATACCC+CGG + chr2.4:64505553-64505572 None:intergenic 50.0%
ACATTGGGATCCTGTCCAGC+AGG + chr2.4:64505517-64505536 None:intergenic 55.0%
AGGCTCCACGCAGTCAATCA+TGG + chr2.4:64504377-64504396 None:intergenic 55.0%
AGTGGCAGGTCCAATCCTCA+TGG + chr2.4:64502890-64502909 None:intergenic 55.0%
ATAACGTACGGCTGCTGTGG+TGG + chr2.4:64501344-64501363 None:intergenic 55.0%
ATAGCTGGCGGTTGTTGTGG+TGG + chr2.4:64501371-64501390 None:intergenic 55.0%
CAAACCTTTCGGCTGAGTGG+TGG + chr2.4:64502929-64502948 None:intergenic 55.0%
CAACAAGATCCAACCCAGGG+TGG - chr2.4:64505421-64505440 MS.gene047966:CDS 55.0%
CACAACAACCGCCAGCTATG+TGG - chr2.4:64501372-64501391 MS.gene047966:CDS 55.0%
CACATAGCTGGCGGTTGTTG+TGG + chr2.4:64501374-64501393 None:intergenic 55.0%
CATCAGGAGCTGTGCAGAAG+AGG - chr2.4:64505224-64505243 MS.gene047966:intron 55.0%
CCGTAATATCCACCAGCAGC+AGG + chr2.4:64505451-64505470 None:intergenic 55.0%
CTGATGAGGTCCGTACTCTC+TGG - chr2.4:64501435-64501454 MS.gene047966:CDS 55.0%
GAGGTCCGTACTCTCTGGAT+CGG - chr2.4:64501440-64501459 MS.gene047966:CDS 55.0%
GGCTCCACGCAGTCAATCAT+GGG + chr2.4:64504376-64504395 None:intergenic 55.0%
GGCTGTTGGTATTGTTGCGG+TGG + chr2.4:64501320-64501339 None:intergenic 55.0%
GTGGCAGGTCCAATCCTCAT+GGG + chr2.4:64502889-64502908 None:intergenic 55.0%
GTTGTTGCTGCTGTGGGTGT+TGG + chr2.4:64505570-64505589 None:intergenic 55.0%
TATTACGGCTATGCCCAGGG+TGG - chr2.4:64505463-64505482 MS.gene047966:CDS 55.0%
TCTCGCTTTGTCCGCCACTA+GGG + chr2.4:64504885-64504904 None:intergenic 55.0%
TTCCATCAGGCAAGCGATGC+GGG - chr2.4:64505086-64505105 MS.gene047966:intron 55.0%
TTCTCGCTTTGTCCGCCACT+AGG + chr2.4:64504886-64504905 None:intergenic 55.0%
! AAGGAGTGCGTCCCCATGAA+AGG + chr2.4:64505296-64505315 None:intergenic 55.0%
! GGAAGTTATCCGGGGTATCC+TGG - chr2.4:64505541-64505560 MS.gene047966:CDS 55.0%
!! TGCTGTGGGTGTTGGTAACC+AGG + chr2.4:64505562-64505581 None:intergenic 55.0%
AACCCGCATCGCTTGCCTGA+TGG + chr2.4:64505091-64505110 None:intergenic 60.0%
ACAACCGCCAGCTATGTGGG+CGG - chr2.4:64501376-64501395 MS.gene047966:CDS 60.0%
AGCAGCAGGGTAACCACCCT+GGG + chr2.4:64505437-64505456 None:intergenic 60.0%
AGGTCGTCGAGGCAGGATGA+TGG - chr2.4:64502643-64502662 MS.gene047966:intron 60.0%
AGTACGGACCTCATCAGCGC+TGG + chr2.4:64501432-64501451 None:intergenic 60.0%
GATGCAACCAGGACACGGCA+TGG - chr2.4:64501271-64501290 MS.gene047966:CDS 60.0%
GGTGGTTGTTGGCCCATGGT+GGG + chr2.4:64501302-64501321 None:intergenic 60.0%
TTGCGGTGGTTGTTGGCCCA+TGG + chr2.4:64501306-64501325 None:intergenic 60.0%
TTGGGATCCTGTCCAGCAGG+AGG + chr2.4:64505514-64505533 None:intergenic 60.0%
! CTGAGGAGGCTGAGCGGATT+GGG + chr2.4:64501402-64501421 None:intergenic 60.0%
ACGTACGGCTGCTGTGGTGG+TGG + chr2.4:64501341-64501360 None:intergenic 65.0%
CAGCAGCAGGGTAACCACCC+TGG + chr2.4:64505438-64505457 None:intergenic 65.0%
CAGGGTGGTTACCCTGCTGC+TGG - chr2.4:64505436-64505455 MS.gene047966:CDS 65.0%
CGGTGGTTGTTGGCCCATGG+TGG + chr2.4:64501303-64501322 None:intergenic 65.0%
CTGCTTCGGTAACACCGGCG+AGG - chr2.4:64501502-64501521 MS.gene047966:intron 65.0%
GATTGGGCCGCCCACATAGC+TGG + chr2.4:64501386-64501405 None:intergenic 65.0%
GCAGGGTAACCACCCTGGGT+TGG + chr2.4:64505433-64505452 None:intergenic 65.0%
GCTGAGGAGGCTGAGCGGAT+TGG + chr2.4:64501403-64501422 None:intergenic 65.0%
GCTGCCACCACTCAGCCGAA+AGG - chr2.4:64502922-64502941 MS.gene047966:intron 65.0%
GGCATGGCTCCTCCCACCAT+GGG - chr2.4:64501287-64501306 MS.gene047966:CDS 65.0%
GGCTCTGTCATCTCGGAGCC+TGG - chr2.4:64503280-64503299 MS.gene047966:intron 65.0%
GGTGGTTACCCTGCTGCTGG+TGG - chr2.4:64505439-64505458 MS.gene047966:CDS 65.0%
GGTTACGCTGCTCCTCCTGC+TGG - chr2.4:64505499-64505518 MS.gene047966:CDS 65.0%
TGGTGAGAGGTCGTCGAGGC+AGG - chr2.4:64502636-64502655 MS.gene047966:intron 65.0%
TTCGGCTGAGTGGTGGCAGC+CGG + chr2.4:64502922-64502941 None:intergenic 65.0%
! ACGGACCTCATCAGCGCTGG+CGG + chr2.4:64501429-64501448 None:intergenic 65.0%
! GGTTGTTGGCCCATGGTGGG+AGG + chr2.4:64501299-64501318 None:intergenic 65.0%
! GTGCTGGTGAGAGGTCGTCG+AGG - chr2.4:64502632-64502651 MS.gene047966:intron 65.0%
!! CTCGCCGGTGTTACCGAAGC+AGG + chr2.4:64501504-64501523 None:intergenic 65.0%
!! GCTGCTGTGGTGGTGGCTGT+TGG + chr2.4:64501334-64501353 None:intergenic 65.0%
CGCTGCTCCTCCTGCTGGAC+AGG - chr2.4:64505504-64505523 MS.gene047966:CDS 70.0%
CGGCATGGCTCCTCCCACCA+TGG - chr2.4:64501286-64501305 MS.gene047966:CDS 70.0%
GGAGGAGCCATGCCGTGTCC+TGG + chr2.4:64501281-64501300 None:intergenic 70.0%
GGGCTGCTGAGGAGGCTGAG+CGG + chr2.4:64501408-64501427 None:intergenic 70.0%
TCGGCTGAGTGGTGGCAGCC+GGG + chr2.4:64502921-64502940 None:intergenic 70.0%
TGGGCCGCCCACATAGCTGG+CGG + chr2.4:64501383-64501402 None:intergenic 70.0%
!! CGGACCTCATCAGCGCTGGC+GGG + chr2.4:64501428-64501447 None:intergenic 70.0%
!! GCAGCCCGCCAGCGCTGATG+AGG - chr2.4:64501421-64501440 MS.gene047966:CDS 75.0%
!! TCAGCGCTGGCGGGCTGCTG+AGG + chr2.4:64501419-64501438 None:intergenic 75.0%
!!! GCGCTGGCGGGCTGCTGAGG+AGG + chr2.4:64501416-64501435 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 64501269 64505609 64501269 ID=MS.gene047966
chr2.4 mRNA 64501269 64505609 64501269 ID=MS.gene047966.t1;Parent=MS.gene047966
chr2.4 exon 64505355 64505609 64505355 ID=MS.gene047966.t1.exon1;Parent=MS.gene047966.t1
chr2.4 CDS 64505355 64505609 64505355 ID=cds.MS.gene047966.t1;Parent=MS.gene047966.t1
chr2.4 exon 64503935 64504412 64503935 ID=MS.gene047966.t1.exon2;Parent=MS.gene047966.t1
chr2.4 CDS 64503935 64504412 64503935 ID=cds.MS.gene047966.t1;Parent=MS.gene047966.t1
chr2.4 exon 64501954 64502006 64501954 ID=MS.gene047966.t1.exon3;Parent=MS.gene047966.t1
chr2.4 CDS 64501954 64502006 64501954 ID=cds.MS.gene047966.t1;Parent=MS.gene047966.t1
chr2.4 exon 64501750 64501880 64501750 ID=MS.gene047966.t1.exon4;Parent=MS.gene047966.t1
chr2.4 CDS 64501750 64501880 64501750 ID=cds.MS.gene047966.t1;Parent=MS.gene047966.t1
chr2.4 exon 64501552 64501648 64501552 ID=MS.gene047966.t1.exon5;Parent=MS.gene047966.t1
chr2.4 CDS 64501552 64501648 64501552 ID=cds.MS.gene047966.t1;Parent=MS.gene047966.t1
chr2.4 exon 64501269 64501460 64501269 ID=MS.gene047966.t1.exon6;Parent=MS.gene047966.t1
chr2.4 CDS 64501269 64501460 64501269 ID=cds.MS.gene047966.t1;Parent=MS.gene047966.t1
Gene Sequence

>MS.gene047966

ATGATGCAACCAGGACACGGCATGGCTCCTCCCACCATGGGCCAACAACCACCGCAACAATACCAACAGCCACCACCACAGCAGCCGTACGTTATGATGCCACCACAACAACCGCCAGCTATGTGGGCGGCCCAATCCGCTCAGCCTCCTCAGCAGCCCGCCAGCGCTGATGAGGTCCGTACTCTCTGGATCGGTGATTTGCAGTACTGGATGGATGAGAATTATCTATATACCTGCTTCGGTAACACCGGCGAGGTATAATATCTTTCTCTCTCTTAATTGTAGAATTAGGGCTTTATTTTGTGTGGTTATTTGTATTATAAATCAAAATCATTTTTTTATTGATTGATTATTGGTGTAAGTTTTGGTGTTAAGGTTGTTTTATTCTGCTAGTGAATTTAGGTTTTTTTTTTTTTTTTTTTTTTAAGAAGCTAAATTAACCCACCCAAATTAGCACCAGAGTGAATCGAACCTGAGACCTTGAGAAATTAGGGTGTTTTAATTTTGGTTTGTAGTTGTTTTATCCTGTTTGTGAAATTAGGGTTTTTAATTTTGGTTTGTAGTAGTTTTATCCTATTTGTGAAATTAGGGTTTTTAATTTTGGTTTGTAGTTGTTTTAGTCTGTTTGTGAAATTAGATTTTGTAATTTTGGGTTGTAGTTATTTTATTTTGTTAGTGAAATCAGGGGTTTTAATTTTGGTTTGTGGTTGTTTTATTCTGTTTACCAATCGCACTTAGGGCCTGTTTGGATAAACTGCTTATTTGCAGTTTATAGCACACGCTCTTATCATATAAGCAACGGGCTTTTTTTATAGAAAAATGTAAAATGTAAACTAATGCTAAATTGTTTTTTTATATGCTATAAGCTGTTTTTAAAACTATATCGGAGAACTTATGAAAATAAGCCAAAAAAAGATTGTGAAAATTGTCACAAGCTGTTTTCATTAGTTCTTACAAACATTCTCACAAAACTTATGCCAGTCGATAACCTCAAATATGCCAATCCTAACAGATCCTATTGGGATAAGGTTTGGTTGTTGTTGTAGTTGTTTTATTCTGTTTTTGAAAGTAGGGTATTGTAATTTTGGTTTGTAGGTGTTTTATGCTGTTCGTAAAATTTGGGTTTTGAAATTTTGGTTTTGTAGTTTGTTTATTATTCTGTTAGTGAAATTTGGGTTTTCTGATTTTGTATTGCAGTTGACATCTGTGAAAGTTATTAGAAATAAGCAAACTAGTCAATCAGAAGGTTATGGCTTTATCGAGTTTAATACTCGTGCTACTGCTGAGAGAGTGCTTCTGACATACAATGGAACCATTATGCCGAATGGTGGTCAGAATTACAGATTGAATTGGGCAACTTTCAGTGCTGGTGAGAGGTCGTCGAGGCAGGATGATGGTCCTGATCATACCATTTTTGTTGGTGATTTGGCTGCGGATGTTACTGATTACCTTCTCCAGGAGACTTTTAGGGCTCGTTATAACTCTGTGAAGGGGGCGAAAGTTGTGATTGATAGGCTTACTGGTAGGTCTAAGGGATATGGTTTTGTGAGATTTGCTGATGAGGGTGAACAGATGAGGGCTATGACTGAGATGCAAGGGGTTCTTTGTTCAACAAGACCCATGAGGATTGGACCTGCCACTAATAAAAACCCGGCTGCCACCACTCAGCCGAAAGGTTTGTCTCTCATATATCTGCTGTTTTCTTTTGCTGTCTGTGAATGTTTGTTCTGCTGCATAATGGTAAATTGTTGTCTTTCTTTAGTTGTCTTACTAATATGTGTGATGTTGGTTAGTTGAATTTAAGGCCTTGTGTACCAAATTACCTTTTGTAGTGTATGCTGAATGCTGCTGTTTAAGTTATGATTCTTTTCGGTTACCCTCGTGAAGATTTTCCGTCCACAGTCGTTTCTTCCTGCAATTTTCCTTTAAAAAAATTGGGCTAAATAAATTATTGCATATGTAGTAATAAAATCTTATAGAACTCCTGTTGTCTCAAAGCAGGGTGTCAAGAGGCTCTGTCATCTCGGAGCCTGGAACTGATTTCAGCTGAAATGGTTACCATTTTAGTGCATGTCCTTGCTTAGGTCAGTTATATGTTTATGTTTGCCCGTTATATTTTTGCGGCATTTTCTTTTCCGCCTACATTTTCAAGTTCTTGTCATTTCGCCTTTTGGTTTAGTTTTTACTCTTATCAAGTTCGCAATTTCTCTGCTTACTTATTTTTCAGTCCATCATTCATAGCCTTTGCTCCTTTAATTTACTCCTATTGGTTTTTCTTAAGAACTACAGACTTTAATTTCTTTAGTAGCTTTCCCTTGTGCCAAAGCAGATCTTATTTACATTTAGCTAAATCTTCTGTTCTTCCAGCAAATGTTTATTTATTTCAGTTCACATTCACCCGTCCATAAGAAAAAAATGTTGAGATAATCAATTTTATCCTCTTATTCTTCTCATATATTTTATTTTATCCTCTTATTCTTATTTGTTCCTCCTTTAAGTCTGAAAATGTTTGATGTTGTATGATAGAGATGATCAATTTCATGGTTTTTATCTGTGTGTAAAGGTTTTAATTGTTTTTACTTTTTAAAGGTTTTGCCTATGCATTATACCATAAGCTGTTTGAATTCATCTTGTATGCATTCCATCAATTGCTCACTTTTTCCCTTTTAGATCAGTCATGCTGAAGTCGTAGGGTTTTAGATAAAGATGGGGGAAGAGATAGACTTCCAACTGTGAATTATGACGAATATTCATTGATTTCTTTTATATGACTGCCATGGTTTTCAAATTGGGAATCAAAAATAAATTTGTAACATTCATTTTGCAAAGAAAAATTTCTGCCATCTATCATACGAATGATACAATAATCCAATAATTTTTAAGTAAAGGACTAACTGCTCAACTCAATCAGTTACCTCCCAATACAATGTGAGGTACTTGTCTCAAATTAAATTGATAGAAGAGTAAAGGTATATCCAAATAAGGTTATATGTTAGCCAGTAACCAACTGATGTGCTGCATGGATCCCCTGTTTTAGAATAATGAAAGAGGTCATCTTCTGAAGTCTGAAATTAGAAGTGACTAATTTGATTTTCTGGGGTTGACCCATGATTGACTGCGTGGAGCCTGTGTATCACTTTGTGATTTTCTAACTGTCAGTTTGATGTGATGAATTTGTGGGTAGTTTATACCTGTCTTCTGCAAATTGTAACATCTTAACCGACAACTATGTATTGAATTTGATTTATATGGATCGTAAATTTTATTTTAATTTATATTGGCTAAACTTACTATGTCATTGTTCTGTACTTATAACTTGATCTCAGTTAAGTAGTGTTATTTTTTTATTTGATGGTTTCCGGTGCAAGAAAATGTAAGTCACTGCCCATTCTGTTGCTTCTGAGTCAGCTCCCTAAATATTTGCTTGCTGTGAATTTTGCCAACGGGGACTTGTTGTACTGTATCAAACAATTAAATAAATAGTTGCACCTTTGGTTATTAAATAAATAGTTGAGATATGTTGTCTTGCTTTTAGCTTTGTTTTTGAATTCATTTTCTATTCACATAATTCATCTTTTTACTTCACTTTCGTTTTGAATGCAGCTTCGTATAACCCTAGTGGCGGACAAAGCGAGAATGATCCCAATAACACAACTGTGCGTACTTCTTTTAATATGTTGAAACTCTGCTTTGTTTGCTACTTGTTTGTGACTTATCTTTTCATTGTAGATTTTTGTTGGCAACTTGGATCCAAATGTCACCGACGATCATCTGAGGCAAGTTTTCACCCAATATGGTGAACTAGTACATGTGAAGATTCCATCAGGCAAGCGATGCGGGTTTGTCCAATTTTCGGACAGGTAATATTACTTCTATATTTGTTTTTTCTATTCTAATATGCGCTAAATCTTTTTCTAGTCTTTGCTGTACTAAGATTGTGCCTTCATTTTTCTTGCATCAGGAGCTGTGCAGAAGAGGCAATACGTGTTTTGAACGGAACTTTATTGGGTGGACAAAATGTTCGCCTTTCATGGGGACGCACTCCTTCAAACAAACAGGTAATATATTAACCTACCCTTGTAATTCTGGGCTGGTTTGACATCGAAGTCTTATTCCAAATCTTTTTAATGACCGTGCTTTTGTTCTCAGACTCAACAAGATCCAACCCAGGGTGGTTACCCTGCTGCTGGTGGATATTACGGCTATGCCCAGGGTGGTTATGAGAATTATGGTTACGCTGCTCCTCCTGCTGGACAGGATCCCAATGTGTATGGAAGTTATCCGGGGTATCCTGGTTACCAACACCCACAGCAGCAACAACAGCAAATGGGATATAGCTAA
Protein sequence

>MS.gene047966.t1

MMQPGHGMAPPTMGQQPPQQYQQPPPQQPYVMMPPQQPPAMWAAQSAQPPQQPASADEVRTLWIGDLQYWMDENYLYTCFGNTGELTSVKVIRNKQTSQSEGYGFIEFNTRATAERVLLTYNGTIMPNGGQNYRLNWATFSAGERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFVRFADEGEQMRAMTEMQGVLCSTRPMRIGPATNKNPAATTQPKASYNPSGGQSENDPNNTTIFVGNLDPNVTDDHLRQVFTQYGELVHVKIPSGKRCGFVQFSDRSCAEEAIRVLNGTLLGGQNVRLSWGRTPSNKQTQQDPTQGGYPAAGGYYGYAQGGYENYGYAAPPAGQDPNVYGSYPGYPGYQHPQQQQQQMGYS