Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74845.t1 | XP_013468910.1 | 97.4 | 391 | 7 | 1 | 1 | 388 | 1 | 391 | 9.80E-226 | 792.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74845.t1 | A0A072VMB2 | 97.4 | 391 | 7 | 1 | 1 | 388 | 1 | 391 | 7.1e-226 | 792.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049148 | MS.gene74845 | 0.801842 | 7.44E-49 | -1.69E-46 |
| MS.gene050173 | MS.gene74845 | 0.802441 | 5.60E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene74845 | 0.825549 | 4.41E-54 | -1.69E-46 |
| MS.gene054056 | MS.gene74845 | 0.818908 | 1.53E-52 | -1.69E-46 |
| MS.gene055942 | MS.gene74845 | 0.834631 | 2.68E-56 | -1.69E-46 |
| MS.gene058171 | MS.gene74845 | 0.808228 | 3.43E-50 | -1.69E-46 |
| MS.gene058173 | MS.gene74845 | 0.800508 | 1.39E-48 | -1.69E-46 |
| MS.gene058175 | MS.gene74845 | 0.815599 | 8.51E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74845.t1 | MTR_1g078290 | 97.442 | 391 | 7 | 1 | 1 | 388 | 1 | 391 | 0.0 | 793 |
| MS.gene74845.t1 | MTR_1g078290 | 94.892 | 372 | 13 | 2 | 1 | 369 | 1 | 369 | 0.0 | 733 |
| MS.gene74845.t1 | MTR_1g078290 | 97.222 | 360 | 7 | 1 | 1 | 357 | 1 | 360 | 0.0 | 731 |
| MS.gene74845.t1 | MTR_1g078290 | 98.089 | 314 | 6 | 0 | 1 | 314 | 1 | 314 | 0.0 | 647 |
| MS.gene74845.t1 | MTR_2g005330 | 55.866 | 358 | 146 | 5 | 36 | 388 | 34 | 384 | 1.60e-148 | 426 |
| MS.gene74845.t1 | MTR_2g005330 | 58.044 | 317 | 120 | 6 | 36 | 347 | 34 | 342 | 1.53e-132 | 384 |
| MS.gene74845.t1 | MTR_2g012570 | 50.815 | 368 | 159 | 4 | 30 | 388 | 12 | 366 | 1.84e-131 | 382 |
| MS.gene74845.t1 | MTR_2g012570 | 50.815 | 368 | 159 | 4 | 30 | 388 | 38 | 392 | 3.14e-131 | 382 |
| MS.gene74845.t1 | MTR_4g090465 | 57.556 | 311 | 125 | 3 | 79 | 388 | 428 | 732 | 1.20e-125 | 379 |
| MS.gene74845.t1 | MTR_2g012570 | 52.698 | 315 | 136 | 3 | 30 | 344 | 12 | 313 | 3.47e-118 | 346 |
| MS.gene74845.t1 | MTR_2g012570 | 52.698 | 315 | 136 | 3 | 30 | 344 | 38 | 339 | 5.67e-118 | 347 |
| MS.gene74845.t1 | MTR_2g005330 | 63.223 | 242 | 88 | 1 | 147 | 388 | 2 | 242 | 1.95e-117 | 342 |
| MS.gene74845.t1 | MTR_7g033300 | 42.897 | 359 | 181 | 9 | 26 | 379 | 35 | 374 | 4.98e-87 | 269 |
| MS.gene74845.t1 | MTR_3g086610 | 45.695 | 302 | 145 | 7 | 75 | 376 | 98 | 380 | 1.02e-82 | 258 |
| MS.gene74845.t1 | MTR_3g086610 | 48.148 | 270 | 127 | 6 | 75 | 344 | 98 | 354 | 4.71e-82 | 255 |
| MS.gene74845.t1 | MTR_8g089820 | 48.148 | 270 | 127 | 6 | 75 | 344 | 89 | 345 | 2.54e-81 | 254 |
| MS.gene74845.t1 | MTR_8g089815 | 44.371 | 302 | 149 | 7 | 75 | 376 | 97 | 379 | 1.11e-80 | 253 |
| MS.gene74845.t1 | MTR_2g094650 | 40.896 | 335 | 180 | 7 | 45 | 379 | 64 | 380 | 3.77e-79 | 249 |
| MS.gene74845.t1 | MTR_4g058800 | 48.106 | 264 | 122 | 7 | 75 | 337 | 77 | 326 | 5.68e-79 | 248 |
| MS.gene74845.t1 | MTR_2g094650 | 40.896 | 335 | 179 | 8 | 45 | 379 | 64 | 379 | 8.21e-78 | 245 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74845.t1 | AT4G18530 | 56.589 | 387 | 144 | 4 | 20 | 387 | 8 | 389 | 7.35e-156 | 444 |
| MS.gene74845.t1 | AT4G18530 | 56.589 | 387 | 144 | 4 | 20 | 387 | 3 | 384 | 8.20e-156 | 444 |
| MS.gene74845.t1 | AT4G12840 | 54.115 | 401 | 159 | 5 | 2 | 388 | 5 | 394 | 1.69e-155 | 444 |
| MS.gene74845.t1 | AT4G12840 | 53.846 | 403 | 162 | 5 | 1 | 388 | 1 | 394 | 3.18e-155 | 443 |
| MS.gene74845.t1 | AT4G12840 | 60.518 | 309 | 99 | 4 | 94 | 388 | 1 | 300 | 3.35e-136 | 391 |
| MS.gene74845.t1 | AT1G11170 | 54.574 | 317 | 130 | 5 | 79 | 386 | 83 | 394 | 7.62e-123 | 362 |
| MS.gene74845.t1 | AT1G11170 | 54.574 | 317 | 130 | 5 | 79 | 386 | 83 | 394 | 7.62e-123 | 362 |
| MS.gene74845.t1 | AT1G11170 | 54.574 | 317 | 130 | 5 | 79 | 386 | 83 | 394 | 7.62e-123 | 362 |
| MS.gene74845.t1 | AT1G11170 | 54.574 | 317 | 130 | 5 | 79 | 386 | 83 | 394 | 7.62e-123 | 362 |
| MS.gene74845.t1 | AT4G18530 | 55.663 | 309 | 124 | 3 | 13 | 313 | 1 | 304 | 2.05e-122 | 356 |
| MS.gene74845.t1 | AT1G61240 | 54.747 | 316 | 130 | 4 | 79 | 385 | 13 | 324 | 7.68e-121 | 354 |
| MS.gene74845.t1 | AT1G61240 | 54.747 | 316 | 130 | 4 | 79 | 385 | 80 | 391 | 5.21e-120 | 355 |
| MS.gene74845.t1 | AT1G61240 | 54.747 | 316 | 130 | 4 | 79 | 385 | 80 | 391 | 5.21e-120 | 355 |
| MS.gene74845.t1 | AT1G61240 | 54.747 | 316 | 130 | 4 | 79 | 385 | 80 | 391 | 5.21e-120 | 355 |
| MS.gene74845.t1 | AT1G61240 | 54.747 | 316 | 130 | 4 | 79 | 385 | 80 | 391 | 5.21e-120 | 355 |
| MS.gene74845.t1 | AT1G61240 | 54.747 | 316 | 130 | 4 | 79 | 385 | 80 | 391 | 5.21e-120 | 355 |
| MS.gene74845.t1 | AT1G61240 | 54.747 | 316 | 130 | 4 | 79 | 385 | 80 | 391 | 5.21e-120 | 355 |
| MS.gene74845.t1 | AT1G11170 | 56.618 | 272 | 110 | 4 | 79 | 347 | 83 | 349 | 6.88e-111 | 329 |
| MS.gene74845.t1 | AT1G11170 | 58.077 | 260 | 103 | 3 | 79 | 337 | 83 | 337 | 6.93e-111 | 328 |
| MS.gene74845.t1 | AT1G11170 | 58.077 | 260 | 103 | 3 | 79 | 337 | 83 | 337 | 6.93e-111 | 328 |
| MS.gene74845.t1 | AT1G61240 | 54.639 | 291 | 122 | 3 | 79 | 369 | 80 | 360 | 1.38e-110 | 328 |
| MS.gene74845.t1 | AT1G11170 | 56.780 | 236 | 96 | 3 | 79 | 313 | 83 | 313 | 1.43e-96 | 291 |
| MS.gene74845.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 85 | 370 | 1.03e-82 | 258 |
| MS.gene74845.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 1.87e-82 | 258 |
| MS.gene74845.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 1.87e-82 | 258 |
| MS.gene74845.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 1.87e-82 | 258 |
| MS.gene74845.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 1.87e-82 | 258 |
| MS.gene74845.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 1.87e-82 | 258 |
| MS.gene74845.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 1.87e-82 | 258 |
| MS.gene74845.t1 | AT3G26440 | 41.417 | 367 | 185 | 11 | 16 | 376 | 12 | 354 | 3.38e-82 | 256 |
| MS.gene74845.t1 | AT3G26440 | 42.614 | 352 | 176 | 11 | 27 | 376 | 51 | 378 | 1.32e-81 | 255 |
| MS.gene74845.t1 | AT3G26440 | 42.614 | 352 | 176 | 11 | 27 | 376 | 51 | 378 | 1.32e-81 | 255 |
| MS.gene74845.t1 | AT3G26440 | 42.614 | 352 | 176 | 11 | 27 | 376 | 74 | 401 | 3.13e-81 | 255 |
| MS.gene74845.t1 | AT3G26440 | 42.614 | 352 | 176 | 11 | 27 | 376 | 74 | 401 | 3.45e-81 | 255 |
| MS.gene74845.t1 | AT3G27470 | 40.056 | 357 | 184 | 9 | 27 | 372 | 38 | 375 | 1.82e-80 | 252 |
| MS.gene74845.t1 | AT3G27470 | 40.056 | 357 | 184 | 9 | 27 | 372 | 38 | 375 | 1.82e-80 | 252 |
| MS.gene74845.t1 | AT3G27470 | 40.056 | 357 | 184 | 9 | 27 | 372 | 38 | 375 | 1.82e-80 | 252 |
| MS.gene74845.t1 | AT3G27470 | 40.056 | 357 | 184 | 9 | 27 | 372 | 38 | 375 | 1.82e-80 | 252 |
| MS.gene74845.t1 | AT1G24570 | 47.426 | 272 | 130 | 6 | 68 | 338 | 77 | 336 | 1.90e-80 | 252 |
| MS.gene74845.t1 | AT3G26440 | 44.409 | 313 | 154 | 8 | 27 | 337 | 51 | 345 | 2.21e-80 | 251 |
| MS.gene74845.t1 | AT3G27470 | 40.056 | 357 | 184 | 9 | 27 | 372 | 38 | 375 | 3.18e-80 | 252 |
| MS.gene74845.t1 | AT1G13000 | 44.918 | 305 | 149 | 7 | 75 | 379 | 105 | 390 | 3.28e-80 | 252 |
| MS.gene74845.t1 | AT1G13000 | 44.918 | 305 | 149 | 7 | 75 | 379 | 105 | 390 | 3.28e-80 | 252 |
| MS.gene74845.t1 | AT1G13000 | 44.918 | 305 | 149 | 7 | 75 | 379 | 105 | 390 | 3.28e-80 | 252 |
| MS.gene74845.t1 | AT1G13000 | 44.918 | 305 | 149 | 7 | 75 | 379 | 105 | 390 | 3.28e-80 | 252 |
| MS.gene74845.t1 | AT1G08040 | 43.092 | 304 | 154 | 7 | 75 | 378 | 84 | 368 | 3.02e-79 | 248 |
| MS.gene74845.t1 | AT1G08040 | 43.092 | 304 | 154 | 7 | 75 | 378 | 88 | 372 | 4.21e-79 | 248 |
| MS.gene74845.t1 | AT1G08040 | 43.092 | 304 | 154 | 7 | 75 | 378 | 88 | 372 | 4.21e-79 | 248 |
| MS.gene74845.t1 | AT1G08040 | 43.092 | 304 | 154 | 7 | 75 | 378 | 88 | 372 | 4.21e-79 | 248 |
| MS.gene74845.t1 | AT2G28310 | 43.934 | 305 | 152 | 7 | 75 | 379 | 81 | 366 | 5.53e-79 | 248 |
| MS.gene74845.t1 | AT2G28310 | 43.934 | 305 | 152 | 7 | 75 | 379 | 81 | 366 | 5.53e-79 | 248 |
| MS.gene74845.t1 | AT2G28310 | 43.934 | 305 | 152 | 7 | 75 | 379 | 81 | 366 | 5.53e-79 | 248 |
| MS.gene74845.t1 | AT1G24570 | 48.092 | 262 | 123 | 6 | 78 | 338 | 80 | 329 | 1.12e-78 | 247 |
| MS.gene74845.t1 | AT1G13000 | 49.791 | 239 | 108 | 5 | 75 | 313 | 105 | 331 | 1.06e-73 | 233 |
| MS.gene74845.t1 | AT1G11170 | 56.000 | 175 | 74 | 1 | 79 | 253 | 83 | 254 | 4.65e-66 | 211 |
| MS.gene74845.t1 | AT2G25905 | 55.833 | 120 | 51 | 2 | 112 | 230 | 109 | 227 | 4.82e-39 | 139 |
Find 78 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGGAGCTGAGACCTTTA+TGG | 0.202931 | 1.1:-58728098 | MS.gene74845:CDS |
| TGTTTATATGTAATCTTTCC+AGG | 0.314586 | 1.1:-58728491 | MS.gene74845:CDS |
| TTGTGTCTGGTACATGATTC+AGG | 0.381583 | 1.1:-58726409 | MS.gene74845:intron |
| GCAGGTGATGACTTGATATC+TGG | 0.391084 | 1.1:+58728728 | None:intergenic |
| ACATTTAAAGCTGTTATTGA+TGG | 0.400949 | 1.1:-58726607 | MS.gene74845:CDS |
| TAAAGGTCTCAGCTCCAAAC+TGG | 0.403016 | 1.1:+58728101 | None:intergenic |
| AGGTATTGTACATACTTCTC+AGG | 0.405666 | 1.1:+58726962 | None:intergenic |
| TGCACATGTTGCTATTGAAA+TGG | 0.405863 | 1.1:+58725113 | None:intergenic |
| AGTCGACAAGATGGTCAAAA+AGG | 0.413897 | 1.1:-58727389 | MS.gene74845:intron |
| CACTACAATCGTCCCACTCT+TGG | 0.414064 | 1.1:-58725900 | MS.gene74845:CDS |
| ACGTTGGGTCAAGGCGGTTA+AGG | 0.422001 | 1.1:-58725156 | MS.gene74845:CDS |
| TTTCAGATGGATAGAAATGA+TGG | 0.430064 | 1.1:-58726460 | MS.gene74845:intron |
| GAGCTGCGTGGCGTTGTGTC+TGG | 0.432485 | 1.1:-58726422 | MS.gene74845:CDS |
| GTTTCTATTGTCAAAGAAGA+AGG | 0.437319 | 1.1:-58726827 | MS.gene74845:CDS |
| TGCATACTTATGATAAATGC+AGG | 0.450254 | 1.1:-58728279 | MS.gene74845:CDS |
| CACGCAGCTCTTGAGAAAAC+AGG | 0.450284 | 1.1:+58726435 | None:intergenic |
| TTCAGATTCATCTCAGGAAA+AGG | 0.450344 | 1.1:-58725738 | MS.gene74845:CDS |
| AGCTTGTTTGCGATGGCAGT+TGG | 0.451629 | 1.1:-58727430 | MS.gene74845:CDS |
| AAAGCTGTTATTGATGGTAA+AGG | 0.462651 | 1.1:-58726601 | MS.gene74845:CDS |
| AGTCTCGAGTACTTCCAGTT+TGG | 0.463403 | 1.1:-58728115 | MS.gene74845:CDS |
| ATCGCAAACAAGCTGGTTGA+TGG | 0.464332 | 1.1:+58727439 | None:intergenic |
| CATATAGCGGTAGTCGATCA+AGG | 0.469047 | 1.1:-58727188 | MS.gene74845:CDS |
| TGGAAGTGAAGCGTTACCTC+AGG | 0.471212 | 1.1:-58728142 | MS.gene74845:CDS |
| CCATTCTTCGACATCCATAA+AGG | 0.475647 | 1.1:+58728084 | None:intergenic |
| GCAGCTTGGCTACTGTTCTC+AGG | 0.478528 | 1.1:-58726269 | MS.gene74845:intron |
| ACGAATGGAAGAAATTCAAA+TGG | 0.484655 | 1.1:-58727226 | MS.gene74845:CDS |
| GCAGGTTTCAGATTCATCTC+AGG | 0.487141 | 1.1:-58725744 | MS.gene74845:intron |
| AAGAGGTTACGGACCCTAGC+AGG | 0.494461 | 1.1:+58728710 | None:intergenic |
| TCATACTCAGCAACTATGTC+GGG | 0.496770 | 1.1:+58727031 | None:intergenic |
| CGTCGACATTTCCATCATAG+TGG | 0.497517 | 1.1:+58727246 | None:intergenic |
| CGGTTAAGGAGGATAAATGT+TGG | 0.503478 | 1.1:-58725142 | MS.gene74845:CDS |
| TTTCTATTGTCAAAGAAGAA+GGG | 0.503868 | 1.1:-58726826 | MS.gene74845:CDS |
| ACAAATAATAAAAGTGCCCC+TGG | 0.506618 | 1.1:+58728473 | None:intergenic |
| GTTGTCTGTGCCTCCAAGAG+TGG | 0.509286 | 1.1:+58725887 | None:intergenic |
| ATATCAAGTCATCACCTGCT+AGG | 0.510981 | 1.1:-58728724 | MS.gene74845:CDS |
| TACAATCGTCCCACTCTTGG+AGG | 0.517019 | 1.1:-58725897 | MS.gene74845:CDS |
| TTGTTTAGTAGAAGCAGTGC+AGG | 0.518852 | 1.1:-58728170 | MS.gene74845:intron |
| ATCATACTCAGCAACTATGT+CGG | 0.519378 | 1.1:+58727030 | None:intergenic |
| AGCACAGCTCCTCCTTGCAC+CGG | 0.522368 | 1.1:-58726565 | MS.gene74845:CDS |
| CGGTAGTCGATCAAGGCAAA+TGG | 0.523052 | 1.1:-58727181 | MS.gene74845:intron |
| ATCAACCAGCTTGTTTGCGA+TGG | 0.533527 | 1.1:-58727437 | MS.gene74845:CDS |
| GTTTATATGTAATCTTTCCA+GGG | 0.534679 | 1.1:-58728490 | MS.gene74845:CDS |
| AACTGCCATCGCAAACAAGC+TGG | 0.536102 | 1.1:+58727432 | None:intergenic |
| GGTTAAGGAGGATAAATGTT+GGG | 0.545766 | 1.1:-58725141 | MS.gene74845:CDS |
| CCTTTATGGATGTCGAAGAA+TGG | 0.546871 | 1.1:-58728084 | MS.gene74845:CDS |
| TTAATTATTTACCCGGTGCA+AGG | 0.552167 | 1.1:+58726553 | None:intergenic |
| ATGATGGAAATGTCGACGAA+TGG | 0.572552 | 1.1:-58727241 | MS.gene74845:CDS |
| GCACAGCTCCTCCTTGCACC+GGG | 0.572784 | 1.1:-58726564 | MS.gene74845:intron |
| TAGAAGCAGTGCAGGCCTAG+TGG | 0.573391 | 1.1:-58728162 | MS.gene74845:CDS |
| TATCAAGTCATCACCTGCTA+GGG | 0.578176 | 1.1:-58728723 | MS.gene74845:intron |
| GAAAGATTTAGTCGACAAGA+TGG | 0.580046 | 1.1:-58727398 | MS.gene74845:CDS |
| GCATATCTAGTCCCCACGCA+TGG | 0.583645 | 1.1:+58726290 | None:intergenic |
| ATTGATGGTAAAGGCTGTGA+TGG | 0.584608 | 1.1:-58726592 | MS.gene74845:CDS |
| GGTAAGGAGACTTTCTTACA+AGG | 0.584746 | 1.1:-58725198 | MS.gene74845:CDS |
| GATGACTTGATATCTGGCAT+TGG | 0.586247 | 1.1:+58728734 | None:intergenic |
| TTGTCTGTGCCTCCAAGAGT+GGG | 0.587991 | 1.1:+58725888 | None:intergenic |
| GAACGACTTGATCCATGCGT+GGG | 0.589877 | 1.1:-58726302 | MS.gene74845:CDS |
| TTTATATGTAATCTTTCCAG+GGG | 0.591637 | 1.1:-58728489 | MS.gene74845:CDS |
| AAATTACCGCACGTGGTAGG+AGG | 0.599371 | 1.1:-58726751 | MS.gene74845:CDS |
| TTGGGTCAAGGCGGTTAAGG+AGG | 0.601086 | 1.1:-58725153 | MS.gene74845:CDS |
| GTAGGAGGTCAAAAGTGCAC+AGG | 0.604453 | 1.1:-58726736 | MS.gene74845:intron |
| GGAAGTGAAGCGTTACCTCA+GGG | 0.611369 | 1.1:-58728141 | MS.gene74845:CDS |
| GGTATTGTACATACTTCTCA+GGG | 0.613026 | 1.1:+58726963 | None:intergenic |
| TTCCTTTGGGATGAGGACCT+AGG | 0.614499 | 1.1:-58727001 | MS.gene74845:CDS |
| CATCATCAAATTACCGCACG+TGG | 0.620146 | 1.1:-58726758 | MS.gene74845:CDS |
| CTCCTAGGTCCTCATCCCAA+AGG | 0.625352 | 1.1:+58726999 | None:intergenic |
| ATACTCACAAAGCTACAAAG+AGG | 0.632222 | 1.1:-58728426 | MS.gene74845:intron |
| ATCAAATTACCGCACGTGGT+AGG | 0.635282 | 1.1:-58726754 | MS.gene74845:CDS |
| TGATGATGTCGTTCATATAG+CGG | 0.641214 | 1.1:-58727201 | MS.gene74845:CDS |
| GCATACTTATGATAAATGCA+GGG | 0.644102 | 1.1:-58728278 | MS.gene74845:intron |
| AGAACGACTTGATCCATGCG+TGG | 0.644784 | 1.1:-58726303 | MS.gene74845:CDS |
| TGGGGACTAGATATGCAGCT+TGG | 0.650458 | 1.1:-58726283 | MS.gene74845:CDS |
| ATTATTTACCCGGTGCAAGG+AGG | 0.658449 | 1.1:+58726556 | None:intergenic |
| ATTGTAGTGAATAATGTACT+CGG | 0.667033 | 1.1:+58725914 | None:intergenic |
| AACGACTTGATCCATGCGTG+GGG | 0.688349 | 1.1:-58726301 | MS.gene74845:CDS |
| GGTAACGCTTCACTTCCACT+AGG | 0.692454 | 1.1:+58728147 | None:intergenic |
| ATTGTACATACTTCTCAGGG+TGG | 0.711500 | 1.1:+58726966 | None:intergenic |
| GTACTCGAGACTATACCCTG+AGG | 0.801494 | 1.1:+58728126 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAATATATGAAAAAAAT+AGG | - | chr1.1:58725220-58725239 | MS.gene74845:intron | 10.0% |
| !! | TATATATAATCATTATCATT+CGG | - | chr1.1:58727670-58727689 | MS.gene74845:intron | 10.0% |
| !!! | TTTCTATTTTTGATATTATA+AGG | - | chr1.1:58725265-58725284 | MS.gene74845:intron | 10.0% |
| !! | TAAAAAATTATATTCTGTGT+TGG | + | chr1.1:58728424-58728443 | None:intergenic | 15.0% |
| !!! | TTAATTTTCCAAAAACATTA+AGG | - | chr1.1:58726965-58726984 | MS.gene74845:intron | 15.0% |
| !!! | TTTTTCCTTTATGATTTTAA+AGG | - | chr1.1:58727002-58727021 | MS.gene74845:CDS | 15.0% |
| !! | AATCACAATCATATAAAGTT+TGG | - | chr1.1:58726930-58726949 | MS.gene74845:intron | 20.0% |
| !! | AATGAAATGAATATTGAATG+AGG | + | chr1.1:58728262-58728281 | None:intergenic | 20.0% |
| !! | CCAAAAATTAATTATTTACC+CGG | + | chr1.1:58727312-58727331 | None:intergenic | 20.0% |
| !! | GATAAGTGATATTCAAAAAT+TGG | + | chr1.1:58726750-58726769 | None:intergenic | 20.0% |
| !! | GATATTCAAAAATTGGATAT+GGG | + | chr1.1:58726743-58726762 | None:intergenic | 20.0% |
| !! | TGATATTCAAAAATTGGATA+TGG | + | chr1.1:58726744-58726763 | None:intergenic | 20.0% |
| !! | TTGTTTATGTATGATCAATA+GGG | - | chr1.1:58727886-58727905 | MS.gene74845:intron | 20.0% |
| !! | TTTATTGCATAATAACAAGA+CGG | + | chr1.1:58725196-58725215 | None:intergenic | 20.0% |
| !!! | ACATACCTTTAAAATCATAA+AGG | + | chr1.1:58727010-58727029 | None:intergenic | 20.0% |
| !!! | ACTAATATATTATTTTGGAG+GGG | - | chr1.1:58728629-58728648 | MS.gene74845:intron | 20.0% |
| !!! | AGATATTTTCAAAAAACGTT+GGG | - | chr1.1:58728684-58728703 | MS.gene74845:intron | 20.0% |
| !!! | AGTATGATTATATTTTCCTT+TGG | - | chr1.1:58726840-58726859 | MS.gene74845:intron | 20.0% |
| !!! | AGTGATGAAGATTTTAAATA+TGG | + | chr1.1:58726256-58726275 | None:intergenic | 20.0% |
| !!! | ATGTATTATTTTGGATGTTT+AGG | - | chr1.1:58725639-58725658 | MS.gene74845:intron | 20.0% |
| !!! | GACTAATATATTATTTTGGA+GGG | - | chr1.1:58728628-58728647 | MS.gene74845:intron | 20.0% |
| !!! | GGAATCAAAATTTTTGTTAT+AGG | - | chr1.1:58725241-58725260 | MS.gene74845:intron | 20.0% |
| !!! | GTATGATTATATTTTCCTTT+GGG | - | chr1.1:58726841-58726860 | MS.gene74845:intron | 20.0% |
| !!! | GTGTGACTAATATATTATTT+TGG | - | chr1.1:58728624-58728643 | MS.gene74845:intron | 20.0% |
| !!! | TAGATATTTTCAAAAAACGT+TGG | - | chr1.1:58728683-58728702 | MS.gene74845:intron | 20.0% |
| !!! | TGACTAATATATTATTTTGG+AGG | - | chr1.1:58728627-58728646 | MS.gene74845:intron | 20.0% |
| !!! | TTGTTTTCTCTTAATACTTT+TGG | - | chr1.1:58725601-58725620 | MS.gene74845:intron | 20.0% |
| ! | AAACTATCAAGCTTCAAAAA+TGG | - | chr1.1:58725539-58725558 | MS.gene74845:intron | 25.0% |
| ! | AACGAATAACTATTGTGTAA+CGG | - | chr1.1:58727810-58727829 | MS.gene74845:intron | 25.0% |
| ! | AGACGGTTATAAAAATTGAA+AGG | + | chr1.1:58725179-58725198 | None:intergenic | 25.0% |
| ! | AGTATCAGTAATGAGAAATT+TGG | + | chr1.1:58726512-58726531 | None:intergenic | 25.0% |
| ! | ATCTTCATCACTATAACATA+TGG | - | chr1.1:58726264-58726283 | MS.gene74845:intron | 25.0% |
| ! | ATTGTAGTGAATAATGTACT+CGG | + | chr1.1:58727944-58727963 | None:intergenic | 25.0% |
| ! | CTATTGATCATACATAAACA+AGG | + | chr1.1:58727887-58727906 | None:intergenic | 25.0% |
| ! | CTTCAACTGCATAAAATTAA+GGG | + | chr1.1:58727358-58727377 | None:intergenic | 25.0% |
| ! | CTTGTTTATGTATGATCAAT+AGG | - | chr1.1:58727885-58727904 | MS.gene74845:intron | 25.0% |
| ! | GTTTATATGTAATCTTTCCA+GGG | - | chr1.1:58725365-58725384 | MS.gene74845:intron | 25.0% |
| ! | TCTTCAACTGCATAAAATTA+AGG | + | chr1.1:58727359-58727378 | None:intergenic | 25.0% |
| ! | TGTTCTTCCAAATTTCTAAA+TGG | - | chr1.1:58725489-58725508 | MS.gene74845:intron | 25.0% |
| ! | TGTTTATATGTAATCTTTCC+AGG | - | chr1.1:58725364-58725383 | MS.gene74845:intron | 25.0% |
| ! | TTGAAGAAGAATCTCAAATA+TGG | + | chr1.1:58728508-58728527 | None:intergenic | 25.0% |
| ! | TTGGACAAAAAACTCTTTAA+AGG | + | chr1.1:58726493-58726512 | None:intergenic | 25.0% |
| ! | TTTATATGTAATCTTTCCAG+GGG | - | chr1.1:58725366-58725385 | MS.gene74845:intron | 25.0% |
| ! | TTTCTATTGTCAAAGAAGAA+GGG | - | chr1.1:58727029-58727048 | MS.gene74845:CDS | 25.0% |
| ! | TTTGGAAAATTAAAATCCGA+TGG | + | chr1.1:58726958-58726977 | None:intergenic | 25.0% |
| !! | AATGAATGTCCTTTTATCTT+AGG | + | chr1.1:58728211-58728230 | None:intergenic | 25.0% |
| !! | ACACTAATCCTTAATGTTTT+TGG | + | chr1.1:58726976-58726995 | None:intergenic | 25.0% |
| !! | ACATTTAAAGCTGTTATTGA+TGG | - | chr1.1:58727248-58727267 | MS.gene74845:CDS | 25.0% |
| !! | ACATTTTTGTTCATCATTTG+CGG | - | chr1.1:58727519-58727538 | MS.gene74845:intron | 25.0% |
| !! | AGATAAAAGGACATTCATTT+TGG | - | chr1.1:58728212-58728231 | MS.gene74845:intron | 25.0% |
| !! | ATGAATGTCCTTTTATCTTA+GGG | + | chr1.1:58728210-58728229 | None:intergenic | 25.0% |
| !! | CCGGGTAAATAATTAATTTT+TGG | - | chr1.1:58727309-58727328 | MS.gene74845:intron | 25.0% |
| !! | CTCTTGATCATGTATTATTT+TGG | - | chr1.1:58725630-58725649 | MS.gene74845:intron | 25.0% |
| !! | TGTTATTTGTGTTTCTTCTT+TGG | - | chr1.1:58725915-58725934 | MS.gene74845:CDS | 25.0% |
| !! | TTGAAAAAACTTGTCCTTTT+GGG | - | chr1.1:58728321-58728340 | MS.gene74845:intron | 25.0% |
| !! | TTTGAAAAAACTTGTCCTTT+TGG | - | chr1.1:58728320-58728339 | MS.gene74845:intron | 25.0% |
| !! | TTTTCAAAGAGAATATGATC+TGG | + | chr1.1:58728308-58728327 | None:intergenic | 25.0% |
| !!! | ATGAACTAATTTGTTTCAGA+TGG | - | chr1.1:58727382-58727401 | MS.gene74845:intron | 25.0% |
| !!! | CTAATATATTATTTTGGAGG+GGG | - | chr1.1:58728630-58728649 | MS.gene74845:intron | 25.0% |
| !!! | CTATTAGTCATTTTCATTGA+GGG | + | chr1.1:58728469-58728488 | None:intergenic | 25.0% |
| !!! | TTATTTTGGATGTTTAGGTT+TGG | - | chr1.1:58725644-58725663 | MS.gene74845:intron | 25.0% |
| AACAATGTAAAGGTGACATA+TGG | - | chr1.1:58726091-58726110 | MS.gene74845:intron | 30.0% | |
| ACAATAGACAGAAATTTGAG+TGG | + | chr1.1:58725837-58725856 | None:intergenic | 30.0% | |
| ACGAATGGAAGAAATTCAAA+TGG | - | chr1.1:58726629-58726648 | MS.gene74845:intron | 30.0% | |
| ATTGAAAGGAAGAAAAGAAG+AGG | + | chr1.1:58725165-58725184 | None:intergenic | 30.0% | |
| CAGATACAGAAATGCAATTA+TGG | + | chr1.1:58727149-58727168 | None:intergenic | 30.0% | |
| CTTCCAAATTTCTAAATGGT+TGG | - | chr1.1:58725493-58725512 | MS.gene74845:intron | 30.0% | |
| GAACCAACCATTTAGAAATT+TGG | + | chr1.1:58725499-58725518 | None:intergenic | 30.0% | |
| GCATACTTATGATAAATGCA+GGG | - | chr1.1:58725577-58725596 | MS.gene74845:intron | 30.0% | |
| GCTTCAAAACACAAAATTCA+AGG | + | chr1.1:58725309-58725328 | None:intergenic | 30.0% | |
| GTGATTACGCAAAACTAAAA+AGG | + | chr1.1:58726916-58726935 | None:intergenic | 30.0% | |
| GTTTCTATTGTCAAAGAAGA+AGG | - | chr1.1:58727028-58727047 | MS.gene74845:CDS | 30.0% | |
| TCAAAAATTGGATATGGGAA+TGG | + | chr1.1:58726738-58726757 | None:intergenic | 30.0% | |
| TCTCAAATATGGAAGCTAAT+TGG | + | chr1.1:58728497-58728516 | None:intergenic | 30.0% | |
| TGCATACTTATGATAAATGC+AGG | - | chr1.1:58725576-58725595 | MS.gene74845:intron | 30.0% | |
| TGTCTATTGTTTAATCCATG+AGG | - | chr1.1:58725847-58725866 | MS.gene74845:intron | 30.0% | |
| TTCAATAGTACTCACATCTA+TGG | - | chr1.1:58727194-58727213 | MS.gene74845:CDS | 30.0% | |
| TTCTTAGAGTAGTTAGTGTA+AGG | - | chr1.1:58725877-58725896 | MS.gene74845:intron | 30.0% | |
| TTTCAGATGGATAGAAATGA+TGG | - | chr1.1:58727395-58727414 | MS.gene74845:CDS | 30.0% | |
| TTTCAGTCAAGATTTGTACT+TGG | - | chr1.1:58726022-58726041 | MS.gene74845:intron | 30.0% | |
| TTTCTGAGTGAACAATGTAA+AGG | - | chr1.1:58726081-58726100 | MS.gene74845:intron | 30.0% | |
| ! | AAAGCTGTTATTGATGGTAA+AGG | - | chr1.1:58727254-58727273 | MS.gene74845:CDS | 30.0% |
| ! | AGGATGAGTACTAGTATTTT+TGG | + | chr1.1:58728242-58728261 | None:intergenic | 30.0% |
| ! | ATTTTGCTTTCAGTTTCATC+TGG | - | chr1.1:58727749-58727768 | MS.gene74845:intron | 30.0% |
| ! | CATATAAAGTTTGGTTCCAT+CGG | - | chr1.1:58726939-58726958 | MS.gene74845:intron | 30.0% |
| ! | GGAAGAACACAAATTTTACT+CGG | + | chr1.1:58725478-58725497 | None:intergenic | 30.0% |
| ! | TAAAAGGACATTCATTTTGG+TGG | - | chr1.1:58728215-58728234 | MS.gene74845:intron | 30.0% |
| ! | TTTTGCTTTCAGTTTCATCT+GGG | - | chr1.1:58727750-58727769 | MS.gene74845:intron | 30.0% |
| !! | GCTATTAGTCATTTTCATTG+AGG | + | chr1.1:58728470-58728489 | None:intergenic | 30.0% |
| !! | TTATATTCTGTGTTGGCTAA+TGG | + | chr1.1:58728417-58728436 | None:intergenic | 30.0% |
| !!! | ATTTTGTGTTTTGAAGCAGA+CGG | - | chr1.1:58725312-58725331 | MS.gene74845:intron | 30.0% |
| !!! | TCTAAGAAGTTTTTTCCTCA+TGG | + | chr1.1:58725865-58725884 | None:intergenic | 30.0% |
| !!! | TTATATTTTCCTTTGGGATG+AGG | - | chr1.1:58726847-58726866 | MS.gene74845:intron | 30.0% |
| AAAGGTGACATATGGTTGTA+AGG | - | chr1.1:58726099-58726118 | MS.gene74845:intron | 35.0% | |
| AAGGTGACATATGGTTGTAA+GGG | - | chr1.1:58726100-58726119 | MS.gene74845:intron | 35.0% | |
| ACCACAATTGCAGATACATA+AGG | + | chr1.1:58726177-58726196 | None:intergenic | 35.0% | |
| ACTGCAATTTGTGTAGAAAG+AGG | + | chr1.1:58726558-58726577 | None:intergenic | 35.0% | |
| AGCACTTGATCCTAAAAAGT+CGG | - | chr1.1:58727069-58727088 | MS.gene74845:intron | 35.0% | |
| AGGAAGAAAAGAAGAGGTTA+CGG | + | chr1.1:58725159-58725178 | None:intergenic | 35.0% | |
| ATACTCACAAAGCTACAAAG+AGG | - | chr1.1:58725429-58725448 | MS.gene74845:intron | 35.0% | |
| ATCATACTCAGCAACTATGT+CGG | + | chr1.1:58726828-58726847 | None:intergenic | 35.0% | |
| CTAATTGCTTACATTTGAGC+AGG | - | chr1.1:58726382-58726401 | MS.gene74845:intron | 35.0% | |
| CTGAATGTCCCTAAGATAAA+AGG | - | chr1.1:58728199-58728218 | MS.gene74845:intron | 35.0% | |
| CTGATACTCTGTTTAATCCA+TGG | - | chr1.1:58726524-58726543 | MS.gene74845:intron | 35.0% | |
| CTGCAATTTGTGTAGAAAGA+GGG | + | chr1.1:58726557-58726576 | None:intergenic | 35.0% | |
| GAAAGATTTAGTCGACAAGA+TGG | - | chr1.1:58726457-58726476 | MS.gene74845:CDS | 35.0% | |
| GGTATTGTACATACTTCTCA+GGG | + | chr1.1:58726895-58726914 | None:intergenic | 35.0% | |
| GGTGATCGAACAAAAAATGT+TGG | - | chr1.1:58727907-58727926 | MS.gene74845:intron | 35.0% | |
| GGTTAAGGAGGATAAATGTT+GGG | - | chr1.1:58728714-58728733 | MS.gene74845:intron | 35.0% | |
| TCAAGCTTCAAAAATGGTGT+AGG | - | chr1.1:58725545-58725564 | MS.gene74845:intron | 35.0% | |
| TCCTTATGTATCTGCAATTG+TGG | - | chr1.1:58726173-58726192 | MS.gene74845:intron | 35.0% | |
| TGACTGAAAGAATCCTTGAT+CGG | + | chr1.1:58726011-58726030 | None:intergenic | 35.0% | |
| TGTGAAAACTGAAATCACTC+AGG | + | chr1.1:58726713-58726732 | None:intergenic | 35.0% | |
| TTAATTATTTACCCGGTGCA+AGG | + | chr1.1:58727305-58727324 | None:intergenic | 35.0% | |
| TTCAGATTCATCTCAGGAAA+AGG | - | chr1.1:58728117-58728136 | MS.gene74845:CDS | 35.0% | |
| TTGGCAATGACAATTCAATG+TGG | - | chr1.1:58727328-58727347 | MS.gene74845:intron | 35.0% | |
| TTTCAAAAAACGTTGGGTCA+AGG | - | chr1.1:58728690-58728709 | MS.gene74845:intron | 35.0% | |
| TTTGCTTTCAGTTTCATCTG+GGG | - | chr1.1:58727751-58727770 | MS.gene74845:intron | 35.0% | |
| ! | AAAAAACTTGTCCTTTTGGG+TGG | - | chr1.1:58728324-58728343 | MS.gene74845:intron | 35.0% |
| ! | AGGTATTGTACATACTTCTC+AGG | + | chr1.1:58726896-58726915 | None:intergenic | 35.0% |
| ! | ATCGCACTGATGAAACAAAA+TGG | + | chr1.1:58727476-58727495 | None:intergenic | 35.0% |
| ! | ATTGTTTCTTCGCAGTTTCA+AGG | - | chr1.1:58726218-58726237 | MS.gene74845:intron | 35.0% |
| ! | TAAACTGTTACTTGCATTGC+AGG | - | chr1.1:58728093-58728112 | MS.gene74845:CDS | 35.0% |
| ! | TGATGAACTTCCGACTTTTT+AGG | + | chr1.1:58727082-58727101 | None:intergenic | 35.0% |
| ! | TGATGATGTCGTTCATATAG+CGG | - | chr1.1:58726654-58726673 | MS.gene74845:intron | 35.0% |
| !! | ACAAATAATAAAAGTGCCCC+TGG | + | chr1.1:58725385-58725404 | None:intergenic | 35.0% |
| !! | GTCAGAAGTTTTGTCAATCA+TGG | + | chr1.1:58727865-58727884 | None:intergenic | 35.0% |
| !! | TGAGCTTGTTTTCAATGACT+AGG | - | chr1.1:58726777-58726796 | MS.gene74845:CDS | 35.0% |
| AGGCAAACTTCAGATTGTCA+TGG | + | chr1.1:58725972-58725991 | None:intergenic | 40.0% | |
| AGGTAAGTAAAGTCCGATCA+AGG | - | chr1.1:58725995-58726014 | MS.gene74845:intron | 40.0% | |
| AGTCGACAAGATGGTCAAAA+AGG | - | chr1.1:58726466-58726485 | MS.gene74845:intron | 40.0% | |
| ATATCAAGTCATCACCTGCT+AGG | - | chr1.1:58725131-58725150 | MS.gene74845:CDS | 40.0% | |
| ATTGTACATACTTCTCAGGG+TGG | + | chr1.1:58726892-58726911 | None:intergenic | 40.0% | |
| CCATTCTTCGACATCCATAA+AGG | + | chr1.1:58725774-58725793 | None:intergenic | 40.0% | |
| CCTTTATGGATGTCGAAGAA+TGG | - | chr1.1:58725771-58725790 | MS.gene74845:intron | 40.0% | |
| CGGTTAAGGAGGATAAATGT+TGG | - | chr1.1:58728713-58728732 | MS.gene74845:intron | 40.0% | |
| CTATTGCACCAAACTCTAGA+AGG | + | chr1.1:58728394-58728413 | None:intergenic | 40.0% | |
| GCTTACATTTGAGCAGGTTA+AGG | - | chr1.1:58726388-58726407 | MS.gene74845:intron | 40.0% | |
| GGTAAGGAGACTTTCTTACA+AGG | - | chr1.1:58728657-58728676 | MS.gene74845:intron | 40.0% | |
| TATCAAGTCATCACCTGCTA+GGG | - | chr1.1:58725132-58725151 | MS.gene74845:CDS | 40.0% | |
| TCATACTCAGCAACTATGTC+GGG | + | chr1.1:58726827-58726846 | None:intergenic | 40.0% | |
| TGTCATGGTTCCTTTCTCTT+GGG | + | chr1.1:58725957-58725976 | None:intergenic | 40.0% | |
| TTGTCATGGTTCCTTTCTCT+TGG | + | chr1.1:58725958-58725977 | None:intergenic | 40.0% | |
| TTGTGTCTGGTACATGATTC+AGG | - | chr1.1:58727446-58727465 | MS.gene74845:CDS | 40.0% | |
| TTGTTTAGTAGAAGCAGTGC+AGG | - | chr1.1:58725685-58725704 | MS.gene74845:intron | 40.0% | |
| ! | ATACTTTTCGTTGTGCTCAC+AGG | - | chr1.1:58727222-58727241 | MS.gene74845:CDS | 40.0% |
| ! | ATGATGGAAATGTCGACGAA+TGG | - | chr1.1:58726614-58726633 | MS.gene74845:CDS | 40.0% |
| ! | ATTGATGGTAAAGGCTGTGA+TGG | - | chr1.1:58727263-58727282 | MS.gene74845:CDS | 40.0% |
| ! | CATCTGGGGTTGTTAAATAG+CGG | - | chr1.1:58727765-58727784 | MS.gene74845:intron | 40.0% |
| !! | GCTTGTTTTCAATGACTAGG+TGG | - | chr1.1:58726780-58726799 | MS.gene74845:CDS | 40.0% |
| !!! | GACTTTTTAGGATCAAGTGC+TGG | + | chr1.1:58727070-58727089 | None:intergenic | 40.0% |
| !!! | TGTTTTGAAGCAGACGGTTT+TGG | - | chr1.1:58725318-58725337 | MS.gene74845:intron | 40.0% |
| AGAAAGAGGGTCATGATCCA+TGG | + | chr1.1:58726544-58726563 | None:intergenic | 45.0% | |
| AGTCTCGAGTACTTCCAGTT+TGG | - | chr1.1:58725740-58725759 | MS.gene74845:CDS | 45.0% | |
| ATCAAATTACCGCACGTGGT+AGG | - | chr1.1:58727101-58727120 | MS.gene74845:intron | 45.0% | |
| ATCGCAAACAAGCTGGTTGA+TGG | + | chr1.1:58726419-58726438 | None:intergenic | 45.0% | |
| ATTATTTACCCGGTGCAAGG+AGG | + | chr1.1:58727302-58727321 | None:intergenic | 45.0% | |
| CAAAAAACGTTGGGTCAAGG+CGG | - | chr1.1:58728693-58728712 | MS.gene74845:intron | 45.0% | |
| CATATAGCGGTAGTCGATCA+AGG | - | chr1.1:58726667-58726686 | MS.gene74845:intron | 45.0% | |
| CATCATCAAATTACCGCACG+TGG | - | chr1.1:58727097-58727116 | MS.gene74845:intron | 45.0% | |
| CGTCGACATTTCCATCATAG+TGG | + | chr1.1:58726612-58726631 | None:intergenic | 45.0% | |
| GCAGGTGATGACTTGATATC+TGG | + | chr1.1:58725130-58725149 | None:intergenic | 45.0% | |
| GCAGGTTTCAGATTCATCTC+AGG | - | chr1.1:58728111-58728130 | MS.gene74845:CDS | 45.0% | |
| TAAAGGTCTCAGCTCCAAAC+TGG | + | chr1.1:58725757-58725776 | None:intergenic | 45.0% | |
| TCGGACTTTACTTACCTCTC+AGG | + | chr1.1:58725992-58726011 | None:intergenic | 45.0% | |
| ! | ATCAACCAGCTTGTTTGCGA+TGG | - | chr1.1:58726418-58726437 | MS.gene74845:CDS | 45.0% |
| ! | ATGTCCTGCGACTCTGATTT+TGG | - | chr1.1:58726132-58726151 | MS.gene74845:intron | 45.0% |
| ! | CAATCTGAAGTTTGCCTGAG+AGG | - | chr1.1:58725975-58725994 | MS.gene74845:intron | 45.0% |
| ! | GGTGGAAGTTTTCTACTCCT+AGG | + | chr1.1:58726874-58726893 | None:intergenic | 45.0% |
| ! | GTGACGCTTTTCCACTATGA+TGG | - | chr1.1:58726598-58726617 | MS.gene74845:CDS | 45.0% |
| ! | GTTTGGAGCTGAGACCTTTA+TGG | - | chr1.1:58725757-58725776 | MS.gene74845:intron | 45.0% |
| !! | TTCCTGCACCTTCTAGAGTT+TGG | - | chr1.1:58728383-58728402 | MS.gene74845:intron | 45.0% |
| !!! | TATTATTTTGGAGGGGGTGC+AGG | - | chr1.1:58728636-58728655 | MS.gene74845:intron | 45.0% |
| AAATTACCGCACGTGGTAGG+AGG | - | chr1.1:58727104-58727123 | MS.gene74845:intron | 50.0% | |
| AACGACTTGATCCATGCGTG+GGG | - | chr1.1:58727554-58727573 | MS.gene74845:intron | 50.0% | |
| AACTGCCATCGCAAACAAGC+TGG | + | chr1.1:58726426-58726445 | None:intergenic | 50.0% | |
| AGAACGACTTGATCCATGCG+TGG | - | chr1.1:58727552-58727571 | MS.gene74845:intron | 50.0% | |
| CACGCAGCTCTTGAGAAAAC+AGG | + | chr1.1:58727423-58727442 | None:intergenic | 50.0% | |
| CACTACAATCGTCCCACTCT+TGG | - | chr1.1:58727955-58727974 | MS.gene74845:intron | 50.0% | |
| CGGTAGTCGATCAAGGCAAA+TGG | - | chr1.1:58726674-58726693 | MS.gene74845:intron | 50.0% | |
| CTAAGCACAAGCCACCCAAA+AGG | + | chr1.1:58728338-58728357 | None:intergenic | 50.0% | |
| CTTCTTTGGTCGTAACCCTC+CGG | - | chr1.1:58725929-58725948 | MS.gene74845:CDS | 50.0% | |
| GAACGACTTGATCCATGCGT+GGG | - | chr1.1:58727553-58727572 | MS.gene74845:intron | 50.0% | |
| GGTAACGCTTCACTTCCACT+AGG | + | chr1.1:58725711-58725730 | None:intergenic | 50.0% | |
| GGTTCCTTTCTCTTGGGAAC+CGG | + | chr1.1:58725951-58725970 | None:intergenic | 50.0% | |
| GTACTCGAGACTATACCCTG+AGG | + | chr1.1:58725732-58725751 | None:intergenic | 50.0% | |
| TACAATCGTCCCACTCTTGG+AGG | - | chr1.1:58727958-58727977 | MS.gene74845:intron | 50.0% | |
| TGGGGACTAGATATGCAGCT+TGG | - | chr1.1:58727572-58727591 | MS.gene74845:intron | 50.0% | |
| TTGTCTGTGCCTCCAAGAGT+GGG | + | chr1.1:58727970-58727989 | None:intergenic | 50.0% | |
| ! | AGCTTGTTTGCGATGGCAGT+TGG | - | chr1.1:58726425-58726444 | MS.gene74845:CDS | 50.0% |
| ! | CACCAAACTCTAGAAGGTGC+AGG | + | chr1.1:58728388-58728407 | None:intergenic | 50.0% |
| ! | CTGTTTTCTCAAGAGCTGCG+TGG | - | chr1.1:58727421-58727440 | MS.gene74845:CDS | 50.0% |
| ! | CTTTTCGTTGTGCTCACAGG+AGG | - | chr1.1:58727225-58727244 | MS.gene74845:CDS | 50.0% |
| ! | GGAAGTGAAGCGTTACCTCA+GGG | - | chr1.1:58725714-58725733 | MS.gene74845:intron | 50.0% |
| ! | GTAGGAGGTCAAAAGTGCAC+AGG | - | chr1.1:58727119-58727138 | MS.gene74845:intron | 50.0% |
| ! | TGGAAGTGAAGCGTTACCTC+AGG | - | chr1.1:58725713-58725732 | MS.gene74845:intron | 50.0% |
| ! | TTTTGACCTCCTACCACGTG+CGG | + | chr1.1:58727113-58727132 | None:intergenic | 50.0% |
| !! | CTTTTGGGTGGCTTGTGCTT+AGG | - | chr1.1:58728336-58728355 | MS.gene74845:intron | 50.0% |
| !! | TTCCTTTGGGATGAGGACCT+AGG | - | chr1.1:58726854-58726873 | MS.gene74845:intron | 50.0% |
| AAGAGGTTACGGACCCTAGC+AGG | + | chr1.1:58725148-58725167 | None:intergenic | 55.0% | |
| ACGTTGGGTCAAGGCGGTTA+AGG | - | chr1.1:58728699-58728718 | MS.gene74845:intron | 55.0% | |
| CCTTTCTCTTGGGAACCGGA+GGG | + | chr1.1:58725947-58725966 | None:intergenic | 55.0% | |
| CTCCTAGGTCCTCATCCCAA+AGG | + | chr1.1:58726859-58726878 | None:intergenic | 55.0% | |
| GCAGCTTGGCTACTGTTCTC+AGG | - | chr1.1:58727586-58727605 | MS.gene74845:intron | 55.0% | |
| GCATATCTAGTCCCCACGCA+TGG | + | chr1.1:58727568-58727587 | None:intergenic | 55.0% | |
| GTTGTCTGTGCCTCCAAGAG+TGG | + | chr1.1:58727971-58727990 | None:intergenic | 55.0% | |
| TAGAAGCAGTGCAGGCCTAG+TGG | - | chr1.1:58725693-58725712 | MS.gene74845:intron | 55.0% | |
| TCCTTTCTCTTGGGAACCGG+AGG | + | chr1.1:58725948-58725967 | None:intergenic | 55.0% | |
| TGCGCCAAAATCAGAGTCGC+AGG | + | chr1.1:58726139-58726158 | None:intergenic | 55.0% | |
| TTGGGTCAAGGCGGTTAAGG+AGG | - | chr1.1:58728702-58728721 | MS.gene74845:intron | 55.0% | |
| !! | TTTTGGAGGGGGTGCAGGTA+AGG | - | chr1.1:58728641-58728660 | MS.gene74845:intron | 55.0% |
| AGCACAGCTCCTCCTTGCAC+CGG | - | chr1.1:58727290-58727309 | MS.gene74845:intron | 60.0% | |
| CCCTCCGGTTCCCAAGAGAA+AGG | - | chr1.1:58725944-58725963 | MS.gene74845:CDS | 60.0% | |
| GAGCTGCGTGGCGTTGTGTC+TGG | - | chr1.1:58727433-58727452 | MS.gene74845:CDS | 65.0% | |
| GCACAGCTCCTCCTTGCACC+GGG | - | chr1.1:58727291-58727310 | MS.gene74845:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 58725124 | 58728753 | 58725124 | ID=MS.gene74845 |
| chr1.1 | mRNA | 58725124 | 58728753 | 58725124 | ID=MS.gene74845.t1;Parent=MS.gene74845 |
| chr1.1 | exon | 58728724 | 58728753 | 58728724 | ID=MS.gene74845.t1.exon1;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58728724 | 58728753 | 58728724 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58728427 | 58728546 | 58728427 | ID=MS.gene74845.t1.exon2;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58728427 | 58728546 | 58728427 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58728279 | 58728338 | 58728279 | ID=MS.gene74845.t1.exon3;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58728279 | 58728338 | 58728279 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58728065 | 58728181 | 58728065 | ID=MS.gene74845.t1.exon4;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58728065 | 58728181 | 58728065 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58727390 | 58727473 | 58727390 | ID=MS.gene74845.t1.exon5;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58727390 | 58727473 | 58727390 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58727182 | 58727300 | 58727182 | ID=MS.gene74845.t1.exon6;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58727182 | 58727300 | 58727182 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58726977 | 58727078 | 58726977 | ID=MS.gene74845.t1.exon7;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58726977 | 58727078 | 58726977 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58726737 | 58726853 | 58726737 | ID=MS.gene74845.t1.exon8;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58726737 | 58726853 | 58726737 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58726565 | 58726633 | 58726565 | ID=MS.gene74845.t1.exon9;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58726565 | 58726633 | 58726565 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58726410 | 58726476 | 58726410 | ID=MS.gene74845.t1.exon10;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58726410 | 58726476 | 58726410 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58726270 | 58726323 | 58726270 | ID=MS.gene74845.t1.exon11;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58726270 | 58726323 | 58726270 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58725878 | 58725970 | 58725878 | ID=MS.gene74845.t1.exon12;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58725878 | 58725970 | 58725878 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58725724 | 58725762 | 58725724 | ID=MS.gene74845.t1.exon13;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58725724 | 58725762 | 58725724 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| chr1.1 | exon | 58725124 | 58725219 | 58725124 | ID=MS.gene74845.t1.exon14;Parent=MS.gene74845.t1 |
| chr1.1 | CDS | 58725124 | 58725219 | 58725124 | ID=cds.MS.gene74845.t1;Parent=MS.gene74845.t1 |
| Gene Sequence |
| Protein sequence |
