Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74933.t1 | XP_013470331.1 | 96.2 | 182 | 7 | 0 | 1 | 182 | 1 | 182 | 3.40E-96 | 360.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74933.t1 | Q41001 | 36.6 | 123 | 75 | 3 | 7 | 129 | 3 | 122 | 4.3e-15 | 82.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74933.t1 | I3RZA8 | 96.2 | 182 | 7 | 0 | 1 | 182 | 1 | 182 | 2.5e-96 | 360.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene74933 | 0.807333 | 5.32E-50 | -1.69E-46 |
| MS.gene050020 | MS.gene74933 | 0.803429 | 3.50E-49 | -1.69E-46 |
| MS.gene050815 | MS.gene74933 | 0.81788 | 2.62E-52 | -1.69E-46 |
| MS.gene051328 | MS.gene74933 | 0.826493 | 2.63E-54 | -1.69E-46 |
| MS.gene052665 | MS.gene74933 | 0.812269 | 4.61E-51 | -1.69E-46 |
| MS.gene055468 | MS.gene74933 | 0.808235 | 3.42E-50 | -1.69E-46 |
| MS.gene055608 | MS.gene74933 | 0.817849 | 2.66E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene74933 | 0.802988 | 4.32E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene74933 | 0.809104 | 2.23E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74933.t1 | MTR_1g112700 | 96.154 | 182 | 7 | 0 | 1 | 182 | 1 | 182 | 3.14e-131 | 365 |
| MS.gene74933.t1 | MTR_3g099580 | 39.216 | 102 | 60 | 2 | 29 | 130 | 22 | 121 | 3.10e-22 | 89.0 |
| MS.gene74933.t1 | MTR_3g099570 | 34.459 | 148 | 81 | 4 | 18 | 161 | 7 | 142 | 1.03e-21 | 87.4 |
| MS.gene74933.t1 | MTR_8g007020 | 35.772 | 123 | 73 | 4 | 9 | 129 | 2 | 120 | 7.75e-20 | 82.4 |
| MS.gene74933.t1 | MTR_8g007035 | 37.398 | 123 | 71 | 4 | 9 | 129 | 2 | 120 | 2.52e-19 | 81.6 |
| MS.gene74933.t1 | MTR_8g089110 | 37.607 | 117 | 67 | 4 | 15 | 129 | 8 | 120 | 1.02e-18 | 77.8 |
| MS.gene74933.t1 | MTR_6g013200 | 36.667 | 120 | 72 | 3 | 14 | 130 | 14 | 132 | 1.13e-18 | 79.3 |
| MS.gene74933.t1 | MTR_3g099680 | 35.294 | 119 | 71 | 3 | 18 | 131 | 7 | 124 | 1.29e-18 | 80.1 |
| MS.gene74933.t1 | MTR_1g104800 | 32.520 | 123 | 76 | 3 | 13 | 133 | 9 | 126 | 3.94e-18 | 78.2 |
| MS.gene74933.t1 | MTR_3g099980 | 34.454 | 119 | 72 | 3 | 18 | 131 | 7 | 124 | 1.53e-17 | 77.4 |
| MS.gene74933.t1 | MTR_5g006040 | 35.294 | 102 | 63 | 2 | 30 | 129 | 23 | 123 | 2.09e-17 | 76.3 |
| MS.gene74933.t1 | MTR_7g086280 | 30.894 | 123 | 80 | 2 | 14 | 134 | 7 | 126 | 2.25e-17 | 75.9 |
| MS.gene74933.t1 | MTR_1g090190 | 33.058 | 121 | 71 | 3 | 30 | 150 | 20 | 130 | 3.73e-17 | 75.5 |
| MS.gene74933.t1 | MTR_4g114870 | 30.719 | 153 | 89 | 4 | 7 | 155 | 5 | 144 | 5.23e-17 | 77.8 |
| MS.gene74933.t1 | MTR_4g114870 | 36.634 | 101 | 59 | 2 | 33 | 129 | 191 | 290 | 2.48e-16 | 75.9 |
| MS.gene74933.t1 | MTR_7g086230 | 29.268 | 123 | 82 | 2 | 14 | 134 | 7 | 126 | 1.77e-16 | 73.6 |
| MS.gene74933.t1 | MTR_6g080660 | 31.092 | 119 | 80 | 2 | 17 | 135 | 12 | 128 | 2.78e-16 | 73.6 |
| MS.gene74933.t1 | MTR_1g105130 | 35.484 | 124 | 77 | 3 | 11 | 132 | 2 | 124 | 4.76e-16 | 72.0 |
| MS.gene74933.t1 | MTR_1g105120 | 35.484 | 124 | 77 | 3 | 11 | 132 | 2 | 124 | 4.76e-16 | 72.0 |
| MS.gene74933.t1 | MTR_7g086160 | 34.821 | 112 | 70 | 2 | 8 | 119 | 4 | 112 | 2.49e-15 | 70.1 |
| MS.gene74933.t1 | MTR_7g086100 | 33.333 | 123 | 75 | 3 | 14 | 132 | 7 | 126 | 3.66e-15 | 71.2 |
| MS.gene74933.t1 | MTR_7g086220 | 32.479 | 117 | 77 | 2 | 14 | 129 | 6 | 121 | 5.37e-15 | 69.3 |
| MS.gene74933.t1 | MTR_8g088830 | 37.255 | 102 | 61 | 2 | 28 | 129 | 23 | 121 | 6.59e-15 | 68.2 |
| MS.gene74933.t1 | MTR_7g086140 | 33.929 | 112 | 70 | 2 | 8 | 119 | 4 | 111 | 6.62e-15 | 68.9 |
| MS.gene74933.t1 | MTR_7g086190 | 33.929 | 112 | 70 | 2 | 8 | 119 | 4 | 111 | 6.62e-15 | 68.9 |
| MS.gene74933.t1 | MTR_6g013420 | 33.607 | 122 | 77 | 3 | 11 | 130 | 16 | 135 | 7.06e-15 | 69.3 |
| MS.gene74933.t1 | MTR_3g089035 | 37.755 | 98 | 57 | 3 | 30 | 127 | 30 | 123 | 2.18e-14 | 66.6 |
| MS.gene74933.t1 | MTR_4g007250 | 33.654 | 104 | 67 | 2 | 28 | 131 | 24 | 125 | 3.36e-14 | 67.4 |
| MS.gene74933.t1 | MTR_8g463180 | 29.167 | 120 | 82 | 2 | 12 | 129 | 3 | 121 | 5.59e-14 | 68.9 |
| MS.gene74933.t1 | MTR_2g088990 | 31.897 | 116 | 73 | 4 | 17 | 128 | 6 | 119 | 1.10e-13 | 67.0 |
| MS.gene74933.t1 | MTR_7g086090 | 32.231 | 121 | 77 | 2 | 13 | 131 | 6 | 123 | 1.10e-13 | 67.4 |
| MS.gene74933.t1 | MTR_6g023760 | 33.010 | 103 | 66 | 3 | 28 | 129 | 21 | 121 | 5.23e-13 | 64.3 |
| MS.gene74933.t1 | MTR_3g089005 | 33.333 | 117 | 72 | 4 | 9 | 125 | 11 | 121 | 5.30e-13 | 63.2 |
| MS.gene74933.t1 | MTR_4g067200 | 28.571 | 126 | 84 | 3 | 13 | 133 | 9 | 133 | 7.84e-13 | 63.5 |
| MS.gene74933.t1 | MTR_4g066110 | 28.571 | 126 | 84 | 3 | 13 | 133 | 9 | 133 | 7.84e-13 | 63.5 |
| MS.gene74933.t1 | MTR_6g013170 | 27.778 | 144 | 88 | 3 | 12 | 153 | 8 | 137 | 1.82e-12 | 62.8 |
| MS.gene74933.t1 | MTR_4g130780 | 28.369 | 141 | 88 | 4 | 13 | 148 | 9 | 141 | 3.09e-12 | 62.4 |
| MS.gene74933.t1 | MTR_2g043730 | 31.933 | 119 | 77 | 3 | 11 | 129 | 10 | 124 | 8.18e-12 | 60.1 |
| MS.gene74933.t1 | MTR_2g090575 | 30.000 | 120 | 79 | 3 | 12 | 129 | 6 | 122 | 3.58e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74933.t1 | AT2G31050 | 38.462 | 143 | 75 | 4 | 11 | 152 | 8 | 138 | 2.69e-23 | 92.0 |
| MS.gene74933.t1 | AT3G17675 | 35.294 | 119 | 72 | 2 | 15 | 129 | 10 | 127 | 1.74e-20 | 82.8 |
| MS.gene74933.t1 | AT5G26330 | 35.294 | 102 | 63 | 2 | 30 | 129 | 21 | 121 | 1.21e-18 | 79.3 |
| MS.gene74933.t1 | AT1G72230 | 30.769 | 169 | 104 | 6 | 8 | 171 | 3 | 163 | 7.39e-18 | 77.4 |
| MS.gene74933.t1 | AT2G26720 | 36.220 | 127 | 78 | 3 | 8 | 133 | 5 | 129 | 2.27e-17 | 76.6 |
| MS.gene74933.t1 | AT2G32300 | 30.769 | 117 | 80 | 1 | 13 | 129 | 6 | 121 | 8.69e-17 | 75.9 |
| MS.gene74933.t1 | AT5G07475 | 28.082 | 146 | 101 | 3 | 12 | 155 | 9 | 152 | 1.03e-16 | 74.7 |
| MS.gene74933.t1 | AT2G32300 | 27.044 | 159 | 109 | 2 | 13 | 171 | 36 | 187 | 1.58e-16 | 75.9 |
| MS.gene74933.t1 | AT2G02850 | 34.211 | 114 | 67 | 4 | 14 | 127 | 21 | 126 | 4.71e-16 | 71.2 |
| MS.gene74933.t1 | AT2G25060 | 28.667 | 150 | 97 | 4 | 16 | 156 | 14 | 162 | 3.36e-15 | 70.5 |
| MS.gene74933.t1 | AT5G15350 | 30.400 | 125 | 81 | 3 | 12 | 131 | 4 | 127 | 3.79e-15 | 70.1 |
| MS.gene74933.t1 | AT5G20230 | 30.645 | 124 | 82 | 2 | 33 | 153 | 25 | 147 | 3.21e-14 | 68.2 |
| MS.gene74933.t1 | AT4G31840 | 27.273 | 154 | 97 | 5 | 9 | 151 | 3 | 152 | 3.23e-14 | 67.4 |
| MS.gene74933.t1 | AT1G22480 | 32.773 | 119 | 78 | 2 | 18 | 136 | 4 | 120 | 3.80e-14 | 67.4 |
| MS.gene74933.t1 | AT2G27035 | 29.310 | 116 | 80 | 2 | 36 | 150 | 32 | 146 | 4.52e-14 | 67.0 |
| MS.gene74933.t1 | AT1G45063 | 33.600 | 125 | 74 | 4 | 13 | 132 | 9 | 129 | 5.04e-14 | 68.6 |
| MS.gene74933.t1 | AT1G45063 | 33.600 | 125 | 74 | 4 | 13 | 132 | 9 | 129 | 1.31e-13 | 68.2 |
| MS.gene74933.t1 | AT4G12880 | 32.479 | 117 | 75 | 3 | 16 | 130 | 12 | 126 | 2.33e-13 | 64.3 |
| MS.gene74933.t1 | AT3G60270 | 33.010 | 103 | 67 | 2 | 27 | 129 | 20 | 120 | 2.61e-13 | 65.5 |
| MS.gene74933.t1 | AT4G32490 | 26.667 | 120 | 85 | 2 | 12 | 129 | 10 | 128 | 4.84e-13 | 65.1 |
| MS.gene74933.t1 | AT1G17800 | 30.833 | 120 | 78 | 2 | 13 | 128 | 17 | 135 | 5.74e-13 | 63.5 |
| MS.gene74933.t1 | AT3G27200 | 29.661 | 118 | 80 | 3 | 13 | 129 | 6 | 121 | 2.01e-12 | 62.8 |
| MS.gene74933.t1 | AT5G53870 | 30.000 | 160 | 97 | 6 | 13 | 159 | 1 | 158 | 2.39e-12 | 64.7 |
| MS.gene74933.t1 | AT5G53870 | 30.000 | 160 | 97 | 6 | 13 | 159 | 1 | 158 | 3.11e-12 | 64.3 |
| MS.gene74933.t1 | AT4G28365 | 31.313 | 99 | 65 | 2 | 33 | 129 | 29 | 126 | 3.26e-12 | 62.8 |
| MS.gene74933.t1 | AT3G60280 | 32.039 | 103 | 68 | 2 | 27 | 129 | 18 | 118 | 5.56e-12 | 62.4 |
| MS.gene74933.t1 | AT3G20570 | 29.545 | 132 | 82 | 3 | 18 | 139 | 8 | 138 | 1.33e-11 | 61.2 |
| MS.gene74933.t1 | AT2G44790 | 33.333 | 96 | 60 | 3 | 40 | 133 | 35 | 128 | 4.77e-11 | 59.7 |
| MS.gene74933.t1 | AT3G18590 | 29.839 | 124 | 76 | 5 | 13 | 129 | 7 | 126 | 7.69e-11 | 58.5 |
Find 34 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCTTGGAGGAATGAGGTT+TGG | 0.332332 | 1.3:-76461779 | MS.gene74933:CDS |
| CCCATGTAGCATAATTTGTT+TGG | 0.336122 | 1.3:+76462253 | None:intergenic |
| GCCTTGGAGGAATGAGGTTT+GGG | 0.340464 | 1.3:-76461778 | MS.gene74933:CDS |
| AAGTTAGTTCCTTTCGGAAC+TGG | 0.360694 | 1.3:-76461635 | MS.gene74933:CDS |
| GATGGAGTTGGTTGAATTTG+TGG | 0.383777 | 1.3:+76461698 | None:intergenic |
| TCTCAAAGATGGAGAGTGAT+TGG | 0.389696 | 1.3:-76461659 | MS.gene74933:CDS |
| TTTAGCCGTGGAGATGTTCT+TGG | 0.401037 | 1.3:-76462216 | MS.gene74933:intron |
| ATTGGGAAGTTAGTTCCTTT+CGG | 0.402044 | 1.3:-76461641 | MS.gene74933:CDS |
| TAAATGAGGTGAAGAGATAT+TGG | 0.410957 | 1.3:-76461826 | MS.gene74933:CDS |
| TGGTTCATTTGCAATATAGC+TGG | 0.431102 | 1.3:-76461806 | MS.gene74933:CDS |
| TGGATTTAATGCACCGTCCA+TGG | 0.449414 | 1.3:+76461718 | None:intergenic |
| ATAGCTGGACATTGCCTTGG+AGG | 0.459542 | 1.3:-76461791 | MS.gene74933:CDS |
| ATGGCTAGTGTTTATGCTGT+TGG | 0.480177 | 1.3:-76462297 | MS.gene74933:CDS |
| CTCAAAGATGGAGAGTGATT+GGG | 0.483596 | 1.3:-76461658 | MS.gene74933:CDS |
| ATTCTTGTATCTCTCAAAGA+TGG | 0.484655 | 1.3:-76461670 | MS.gene74933:CDS |
| GACATTGCCTTGGAGGAATG+AGG | 0.494262 | 1.3:-76461784 | MS.gene74933:CDS |
| GCCAAACAAATTATGCTACA+TGG | 0.511548 | 1.3:-76462254 | MS.gene74933:CDS |
| CAACAATGGTACTAATTCCA+TGG | 0.540787 | 1.3:-76461735 | MS.gene74933:CDS |
| AATATAGCTGGACATTGCCT+TGG | 0.550956 | 1.3:-76461794 | MS.gene74933:CDS |
| AGATCAAGTGGTTCTAAATG+AGG | 0.556619 | 1.3:-76461840 | MS.gene74933:CDS |
| CTGTTGGTGATCAAGATGAA+TGG | 0.566698 | 1.3:-76462281 | MS.gene74933:CDS |
| AATAAGAATTGAGAGTATGA+AGG | 0.571197 | 1.3:+76462350 | None:intergenic |
| GTGTTGGCTAAGTATGAAAG+TGG | 0.577082 | 1.3:-76461866 | MS.gene74933:CDS |
| GTCAAAGAAGATAGCAACAA+TGG | 0.584763 | 1.3:-76461749 | MS.gene74933:CDS |
| TAATGTGTATGAAGTGAGAG+AGG | 0.584918 | 1.3:-76461921 | MS.gene74933:CDS |
| CCAAACAAATTATGCTACAT+GGG | 0.597055 | 1.3:-76462253 | MS.gene74933:CDS |
| AATAATAATCCAGTTCCGAA+AGG | 0.605908 | 1.3:+76461626 | None:intergenic |
| TGAAACAAGTAGTGGAGTGT+TGG | 0.609215 | 1.3:-76461882 | MS.gene74933:CDS |
| AGATCATGTGAAACAAGTAG+TGG | 0.611448 | 1.3:-76461890 | MS.gene74933:CDS |
| AATGGTACTAATTCCATGGA+CGG | 0.621827 | 1.3:-76461731 | MS.gene74933:CDS |
| GAGAGATACAACTTTAGCCG+TGG | 0.623416 | 1.3:-76462228 | MS.gene74933:CDS |
| TCCCAAACCTCATTCCTCCA+AGG | 0.624087 | 1.3:+76461777 | None:intergenic |
| TGAAAGTGGAGAAGATCAAG+TGG | 0.654735 | 1.3:-76461852 | MS.gene74933:CDS |
| TACTACCAAGAACATCTCCA+CGG | 0.676544 | 1.3:+76462211 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTAAATTATATTTT+TGG | - | chr1.3:76462003-76462022 | MS.gene74933:intron | 0.0% |
| !!! | TTATATTTTTGGTGTTGTAT+TGG | - | chr1.3:76462014-76462033 | MS.gene74933:intron | 20.0% |
| ! | AAGATAATGTTATGATCACA+TGG | + | chr1.3:76461886-76461905 | None:intergenic | 25.0% |
| !! | AATAAGAATTGAGAGTATGA+AGG | + | chr1.3:76461641-76461660 | None:intergenic | 25.0% |
| !! | ATCACATGGATATCTTTTAT+TGG | + | chr1.3:76461872-76461891 | None:intergenic | 25.0% |
| !!! | ATAGTTTTCAAGTATGTGAA+GGG | - | chr1.3:76462038-76462057 | MS.gene74933:intron | 25.0% |
| !!! | TATAGTTTTCAAGTATGTGA+AGG | - | chr1.3:76462037-76462056 | MS.gene74933:intron | 25.0% |
| AATAATAATCCAGTTCCGAA+AGG | + | chr1.3:76462365-76462384 | None:intergenic | 30.0% | |
| ATTCTTGTATCTCTCAAAGA+TGG | - | chr1.3:76462318-76462337 | MS.gene74933:CDS | 30.0% | |
| CCAAACAAATTATGCTACAT+GGG | - | chr1.3:76461735-76461754 | MS.gene74933:CDS | 30.0% | |
| TAAATGAGGTGAAGAGATAT+TGG | - | chr1.3:76462162-76462181 | MS.gene74933:intron | 30.0% | |
| ! | GAGATACAAGAATTTTGTGA+TGG | + | chr1.3:76462311-76462330 | None:intergenic | 30.0% |
| ! | TTTTCTCTTGAATTGTGTCA+TGG | - | chr1.3:76461672-76461691 | MS.gene74933:CDS | 30.0% |
| !!! | TAGTTTTCAAGTATGTGAAG+GGG | - | chr1.3:76462039-76462058 | MS.gene74933:intron | 30.0% |
| AATGGTACTAATTCCATGGA+CGG | - | chr1.3:76462257-76462276 | MS.gene74933:CDS | 35.0% | |
| AGATCATGTGAAACAAGTAG+TGG | - | chr1.3:76462098-76462117 | MS.gene74933:intron | 35.0% | |
| ATTGGGAAGTTAGTTCCTTT+CGG | - | chr1.3:76462347-76462366 | MS.gene74933:CDS | 35.0% | |
| CAACAATGGTACTAATTCCA+TGG | - | chr1.3:76462253-76462272 | MS.gene74933:CDS | 35.0% | |
| GCCAAACAAATTATGCTACA+TGG | - | chr1.3:76461734-76461753 | MS.gene74933:CDS | 35.0% | |
| GTCAAAGAAGATAGCAACAA+TGG | - | chr1.3:76462239-76462258 | MS.gene74933:CDS | 35.0% | |
| TAATGTGTATGAAGTGAGAG+AGG | - | chr1.3:76462067-76462086 | MS.gene74933:intron | 35.0% | |
| TGGTTCATTTGCAATATAGC+TGG | - | chr1.3:76462182-76462201 | MS.gene74933:intron | 35.0% | |
| !! | AGATCAAGTGGTTCTAAATG+AGG | - | chr1.3:76462148-76462167 | MS.gene74933:intron | 35.0% |
| !! | CAAGAATTTTGTGATGGAGT+TGG | + | chr1.3:76462305-76462324 | None:intergenic | 35.0% |
| !! | CCCATGTAGCATAATTTGTT+TGG | + | chr1.3:76461738-76461757 | None:intergenic | 35.0% |
| AAGTTAGTTCCTTTCGGAAC+TGG | - | chr1.3:76462353-76462372 | MS.gene74933:CDS | 40.0% | |
| AATATAGCTGGACATTGCCT+TGG | - | chr1.3:76462194-76462213 | MS.gene74933:intron | 40.0% | |
| ATGGCTAGTGTTTATGCTGT+TGG | - | chr1.3:76461691-76461710 | MS.gene74933:CDS | 40.0% | |
| CTCAAAGATGGAGAGTGATT+GGG | - | chr1.3:76462330-76462349 | MS.gene74933:CDS | 40.0% | |
| TACTACCAAGAACATCTCCA+CGG | + | chr1.3:76461780-76461799 | None:intergenic | 40.0% | |
| TCTCAAAGATGGAGAGTGAT+TGG | - | chr1.3:76462329-76462348 | MS.gene74933:CDS | 40.0% | |
| TGAAAGTGGAGAAGATCAAG+TGG | - | chr1.3:76462136-76462155 | MS.gene74933:intron | 40.0% | |
| ! | GATGGAGTTGGTTGAATTTG+TGG | + | chr1.3:76462293-76462312 | None:intergenic | 40.0% |
| ! | TGAAACAAGTAGTGGAGTGT+TGG | - | chr1.3:76462106-76462125 | MS.gene74933:intron | 40.0% |
| !! | CTGTTGGTGATCAAGATGAA+TGG | - | chr1.3:76461707-76461726 | MS.gene74933:CDS | 40.0% |
| !! | GTGTTGGCTAAGTATGAAAG+TGG | - | chr1.3:76462122-76462141 | MS.gene74933:intron | 40.0% |
| GAGAGATACAACTTTAGCCG+TGG | - | chr1.3:76461760-76461779 | MS.gene74933:CDS | 45.0% | |
| TGGATTTAATGCACCGTCCA+TGG | + | chr1.3:76462273-76462292 | None:intergenic | 45.0% | |
| TTTAGCCGTGGAGATGTTCT+TGG | - | chr1.3:76461772-76461791 | MS.gene74933:CDS | 45.0% | |
| ATAGCTGGACATTGCCTTGG+AGG | - | chr1.3:76462197-76462216 | MS.gene74933:intron | 50.0% | |
| GACATTGCCTTGGAGGAATG+AGG | - | chr1.3:76462204-76462223 | MS.gene74933:intron | 50.0% | |
| GCCTTGGAGGAATGAGGTTT+GGG | - | chr1.3:76462210-76462229 | MS.gene74933:intron | 50.0% | |
| TCCCAAACCTCATTCCTCCA+AGG | + | chr1.3:76462214-76462233 | None:intergenic | 50.0% | |
| TGCCTTGGAGGAATGAGGTT+TGG | - | chr1.3:76462209-76462228 | MS.gene74933:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 76461607 | 76462403 | 76461607 | ID=MS.gene74933 |
| chr1.3 | mRNA | 76461607 | 76462403 | 76461607 | ID=MS.gene74933.t1;Parent=MS.gene74933 |
| chr1.3 | exon | 76462217 | 76462403 | 76462217 | ID=MS.gene74933.t1.exon1;Parent=MS.gene74933.t1 |
| chr1.3 | CDS | 76462217 | 76462403 | 76462217 | ID=cds.MS.gene74933.t1;Parent=MS.gene74933.t1 |
| chr1.3 | exon | 76461607 | 76461968 | 76461607 | ID=MS.gene74933.t1.exon2;Parent=MS.gene74933.t1 |
| chr1.3 | CDS | 76461607 | 76461968 | 76461607 | ID=cds.MS.gene74933.t1;Parent=MS.gene74933.t1 |
| Gene Sequence |
| Protein sequence |
