Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75051.t1 | XP_013453216.1 | 97.3 | 184 | 5 | 0 | 1 | 184 | 35 | 218 | 7.70E-96 | 359.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75051.t1 | Q8GYD2 | 71.0 | 186 | 52 | 1 | 1 | 184 | 35 | 220 | 1.9e-71 | 270.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75051.t1 | A0A072UBP5 | 97.3 | 184 | 5 | 0 | 1 | 184 | 35 | 218 | 5.6e-96 | 359.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75051 | MS.gene042624 | PPI |
| MS.gene59695 | MS.gene75051 | PPI |
| MS.gene053883 | MS.gene75051 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75051.t1 | MTR_6g090585 | 97.283 | 184 | 5 | 0 | 1 | 184 | 35 | 218 | 2.80e-135 | 377 |
| MS.gene75051.t1 | MTR_6g090585 | 97.283 | 184 | 5 | 0 | 1 | 184 | 1 | 184 | 3.72e-135 | 375 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75051.t1 | AT4G29170 | 71.910 | 178 | 50 | 0 | 1 | 178 | 35 | 212 | 6.20e-97 | 280 |
| MS.gene75051.t1 | AT4G29170 | 71.910 | 178 | 50 | 0 | 1 | 178 | 20 | 197 | 9.87e-97 | 279 |
| MS.gene75051.t1 | AT4G29170 | 73.950 | 119 | 31 | 0 | 1 | 119 | 35 | 153 | 2.28e-60 | 185 |
Find 34 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGATGAATTTGACTATT+TGG | 0.177522 | 6.3:+83637152 | MS.gene75051:CDS |
| GTTTGCCTCAGGTATACTTC+TGG | 0.305839 | 6.3:+83635470 | MS.gene75051:intron |
| CTGACTAATCACACCCTTCT+TGG | 0.326573 | 6.3:-83634851 | None:intergenic |
| TCCTAGCTGCGCTGGAAATC+AGG | 0.370421 | 6.3:+83635498 | MS.gene75051:CDS |
| TGACTAATCACACCCTTCTT+GGG | 0.388123 | 6.3:-83634850 | None:intergenic |
| CTCGTTATGCTTCAGCTGAA+TGG | 0.403450 | 6.3:-83635913 | None:intergenic |
| TAAAGATGTTGTCCAAAGTT+TGG | 0.424035 | 6.3:+83634879 | MS.gene75051:CDS |
| GCTGAAGCATAACGAGTTGA+AGG | 0.448016 | 6.3:+83635920 | MS.gene75051:CDS |
| CTCACATTGCTCGACAAGTT+GGG | 0.470737 | 6.3:-83635716 | None:intergenic |
| CTTGTTTCAAAAGATAAGAT+AGG | 0.479340 | 6.3:+83634913 | MS.gene75051:CDS |
| CTCATTGCTTCAAAGGCAGC+AGG | 0.480603 | 6.3:-83636063 | None:intergenic |
| GGTCATCATCCACCAAACTT+TGG | 0.481752 | 6.3:-83634891 | None:intergenic |
| GCAATGTGAGGCACTAAAGA+AGG | 0.484694 | 6.3:+83635729 | MS.gene75051:CDS |
| CCTCACATTGCTCGACAAGT+TGG | 0.509517 | 6.3:-83635717 | None:intergenic |
| AAAGAACTTCCCTCAGGCTA+AGG | 0.520012 | 6.3:+83636433 | MS.gene75051:CDS |
| TGAGAAGATGGGCCCCAAGA+AGG | 0.520689 | 6.3:+83634837 | None:intergenic |
| GCAGCAGCTAACAGATGGAC+AGG | 0.530552 | 6.3:+83636230 | MS.gene75051:CDS |
| AGATGTTGTCCAAAGTTTGG+TGG | 0.534526 | 6.3:+83634882 | MS.gene75051:CDS |
| TTCTTAACTCATTGCTTCAA+AGG | 0.538990 | 6.3:-83636070 | None:intergenic |
| GAGAAGATGGGCCCCAAGAA+GGG | 0.551371 | 6.3:+83634838 | None:intergenic |
| CTCATGCAGCAGCTAACAGA+TGG | 0.556525 | 6.3:+83636225 | MS.gene75051:CDS |
| TGGAGTCTTCCTAGCTGCGC+TGG | 0.556716 | 6.3:+83635490 | MS.gene75051:CDS |
| GAAGCTGTTCCTTAGCCTGA+GGG | 0.565831 | 6.3:-83636442 | None:intergenic |
| AAAAGATAAGATAGGCACTT+CGG | 0.587768 | 6.3:+83634921 | MS.gene75051:CDS |
| GACTAATCACACCCTTCTTG+GGG | 0.593541 | 6.3:-83634849 | None:intergenic |
| GTGTTCAAAGAACTTCCCTC+AGG | 0.594722 | 6.3:+83636427 | MS.gene75051:CDS |
| CAATGTGAGGCACTAAAGAA+GGG | 0.596193 | 6.3:+83635730 | MS.gene75051:CDS |
| ACCTGATTTCCAGCGCAGCT+AGG | 0.611658 | 6.3:-83635499 | None:intergenic |
| AACTGCAAAACAGTGGTACA+CGG | 0.615147 | 6.3:+83635689 | MS.gene75051:CDS |
| TGAAGCTGTTCCTTAGCCTG+AGG | 0.616772 | 6.3:-83636443 | None:intergenic |
| GCTTCAGAACATGTACCAAG+AGG | 0.670511 | 6.3:+83636460 | MS.gene75051:CDS |
| GGCACTAAAGAAGGGACGTG+AGG | 0.681032 | 6.3:+83635738 | MS.gene75051:CDS |
| CCAACTTGTCGAGCAATGTG+AGG | 0.684357 | 6.3:+83635717 | MS.gene75051:CDS |
| GATTCTGAACTGCAAAACAG+TGG | 0.686674 | 6.3:+83635682 | MS.gene75051:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTCTTTTTTTCTTTTT+AGG | + | chr6.3:83635857-83635876 | MS.gene75051:intron | 10.0% |
| !! | AAATAACGATACATATAAAA+TGG | - | chr6.3:83636110-83636129 | None:intergenic | 15.0% |
| !! | CAAATAAACCAATTTAAATA+GGG | + | chr6.3:83635378-83635397 | MS.gene75051:intron | 15.0% |
| !! | CTTTAGGTAATATTAATAAA+AGG | - | chr6.3:83637032-83637051 | None:intergenic | 15.0% |
| !! | TCAAATAAACCAATTTAAAT+AGG | + | chr6.3:83635377-83635396 | MS.gene75051:intron | 15.0% |
| !!! | ATATTTTTATCTTTTTGTTG+CGG | + | chr6.3:83636363-83636382 | MS.gene75051:intron | 15.0% |
| !!! | TATTATGAAATTTCTCATTT+TGG | + | chr6.3:83636321-83636340 | MS.gene75051:intron | 15.0% |
| !! | AAGAAAAAAAATGCAATGTA+AGG | - | chr6.3:83635846-83635865 | None:intergenic | 20.0% |
| !! | CTTATTTACTCAATACAATT+TGG | + | chr6.3:83636976-83636995 | MS.gene75051:intron | 20.0% |
| !! | TCTAAGAATAGATAATTTGA+CGG | - | chr6.3:83637073-83637092 | None:intergenic | 20.0% |
| !!! | ATTTTTTGAATGACCTTTAA+TGG | + | chr6.3:83636591-83636610 | MS.gene75051:intron | 20.0% |
| !!! | GTAGTGTTAAATTTTGAAAT+AGG | - | chr6.3:83636739-83636758 | None:intergenic | 20.0% |
| !!! | TATTGAGTAAATAAGCATTT+TGG | - | chr6.3:83636971-83636990 | None:intergenic | 20.0% |
| !!! | TTGCTGTTTCATAAATTTAA+GGG | + | chr6.3:83636913-83636932 | MS.gene75051:intron | 20.0% |
| !!! | TTTGCTGTTTCATAAATTTA+AGG | + | chr6.3:83636912-83636931 | MS.gene75051:intron | 20.0% |
| ! | AAAAGTCATAACATGTAACA+TGG | - | chr6.3:83635058-83635077 | None:intergenic | 25.0% |
| ! | AACAGATGAATTTGACTATT+TGG | + | chr6.3:83637152-83637171 | MS.gene75051:CDS | 25.0% |
| ! | AAGTCATATCATTCCATTAA+AGG | - | chr6.3:83636607-83636626 | None:intergenic | 25.0% |
| ! | ATGATGTAATTAGGTTACAT+TGG | - | chr6.3:83635620-83635639 | None:intergenic | 25.0% |
| ! | ATTTGATTCCTAAAAAAGCA+GGG | - | chr6.3:83635806-83635825 | None:intergenic | 25.0% |
| ! | CTTGTTTCAAAAGATAAGAT+AGG | + | chr6.3:83634913-83634932 | MS.gene75051:CDS | 25.0% |
| ! | TAATAAAAGGACATGTAATG+TGG | - | chr6.3:83637019-83637038 | None:intergenic | 25.0% |
| ! | TCCTTTAAATTGATCAATGT+CGG | + | chr6.3:83636704-83636723 | MS.gene75051:intron | 25.0% |
| ! | TGATGTAATTAGGTTACATT+GGG | - | chr6.3:83635619-83635638 | None:intergenic | 25.0% |
| ! | TTTGTCTGAATACTTTCATT+GGG | + | chr6.3:83636144-83636163 | MS.gene75051:intron | 25.0% |
| !! | ATGTTACATGTTATGACTTT+TGG | + | chr6.3:83635057-83635076 | MS.gene75051:intron | 25.0% |
| !! | GATTAAGGCTCTTTAATTTA+AGG | + | chr6.3:83636883-83636902 | MS.gene75051:intron | 25.0% |
| !! | TTTTTGTTGCGGATAAAAAA+TGG | + | chr6.3:83636374-83636393 | MS.gene75051:intron | 25.0% |
| !!! | CTATCTTATCTTTTGAAACA+AGG | - | chr6.3:83634915-83634934 | None:intergenic | 25.0% |
| !!! | TGATGTATTGGTATTGATTT+TGG | + | chr6.3:83636181-83636200 | MS.gene75051:intron | 25.0% |
| !!! | TTATGAACGAGATATTTTGA+TGG | + | chr6.3:83636848-83636867 | MS.gene75051:intron | 25.0% |
| AAAAGATAAGATAGGCACTT+CGG | + | chr6.3:83634921-83634940 | MS.gene75051:CDS | 30.0% | |
| ACCGACATTGATCAATTTAA+AGG | - | chr6.3:83636708-83636727 | None:intergenic | 30.0% | |
| ATTGATCAATGCTTACGATT+TGG | - | chr6.3:83636653-83636672 | None:intergenic | 30.0% | |
| CATTTGATTCCTAAAAAAGC+AGG | - | chr6.3:83635807-83635826 | None:intergenic | 30.0% | |
| CCAACATATCAACATAAAGA+TGG | - | chr6.3:83635564-83635583 | None:intergenic | 30.0% | |
| CCATCTTTATGTTGATATGT+TGG | + | chr6.3:83635561-83635580 | MS.gene75051:intron | 30.0% | |
| GTGTTTGCAATGATGTAATT+AGG | - | chr6.3:83635629-83635648 | None:intergenic | 30.0% | |
| GTTTGTCTGAATACTTTCAT+TGG | + | chr6.3:83636143-83636162 | MS.gene75051:intron | 30.0% | |
| TAAAGATGTTGTCCAAAGTT+TGG | + | chr6.3:83634879-83634898 | MS.gene75051:CDS | 30.0% | |
| TAGGAGCAATAATCAATTAG+AGG | - | chr6.3:83635449-83635468 | None:intergenic | 30.0% | |
| TATAAGCTACAAACCACTTA+TGG | + | chr6.3:83635286-83635305 | MS.gene75051:intron | 30.0% | |
| TCAATATGCATGTCTTTCAT+TGG | + | chr6.3:83636812-83636831 | MS.gene75051:intron | 30.0% | |
| TGCATTGTCCCTATTTAAAT+TGG | - | chr6.3:83635389-83635408 | None:intergenic | 30.0% | |
| TGTAACTCATATCCAGTTAT+TGG | + | chr6.3:83636524-83636543 | MS.gene75051:intron | 30.0% | |
| TTACATTGGGATACAATAGA+GGG | - | chr6.3:83635606-83635625 | None:intergenic | 30.0% | |
| TTCTTAACTCATTGCTTCAA+AGG | - | chr6.3:83636073-83636092 | None:intergenic | 30.0% | |
| TTGTTCATTTCATCCAAACA+AGG | - | chr6.3:83635083-83635102 | None:intergenic | 30.0% | |
| TTTGGAAGAGCTTATGAATA+TGG | - | chr6.3:83635324-83635343 | None:intergenic | 30.0% | |
| ! | AATGGCTTTTAAATCTGCTA+GGG | - | chr6.3:83635898-83635917 | None:intergenic | 30.0% |
| !! | CTCATTTTGGTACTATATGA+TGG | + | chr6.3:83636334-83636353 | MS.gene75051:intron | 30.0% |
| !!! | ATATTTTCACTCTGAAGCAA+TGG | + | chr6.3:83636405-83636424 | MS.gene75051:CDS | 30.0% |
| !!! | CTGCTTTTTTAGGAATCAAA+TGG | + | chr6.3:83635805-83635824 | MS.gene75051:intron | 30.0% |
| !!! | TTTTTTAGGAATCAAATGGC+TGG | + | chr6.3:83635809-83635828 | MS.gene75051:intron | 30.0% |
| AAACTGAAACAGTCCATACA+GGG | - | chr6.3:83634998-83635017 | None:intergenic | 35.0% | |
| AACTGAAATGACTAACCTCT+TGG | - | chr6.3:83636478-83636497 | None:intergenic | 35.0% | |
| AACTGGATATGAGTTACACA+CGG | - | chr6.3:83636522-83636541 | None:intergenic | 35.0% | |
| ATCTGTTATACCAATCTGCA+TGG | - | chr6.3:83637139-83637158 | None:intergenic | 35.0% | |
| CCTAAAAAAGCAGGGAAAAT+TGG | - | chr6.3:83635798-83635817 | None:intergenic | 35.0% | |
| CGAAAAATGCTTAGATTTGC+TGG | + | chr6.3:83635412-83635431 | MS.gene75051:intron | 35.0% | |
| CTTGTATTATTGTCCCTGTA+TGG | + | chr6.3:83634982-83635001 | MS.gene75051:intron | 35.0% | |
| GAAATCAGGTGAACTTCTAT+TGG | + | chr6.3:83635512-83635531 | MS.gene75051:intron | 35.0% | |
| GAACTATATACAAGCATCAG+CGG | - | chr6.3:83634963-83634982 | None:intergenic | 35.0% | |
| GTTACATTGGGATACAATAG+AGG | - | chr6.3:83635607-83635626 | None:intergenic | 35.0% | |
| TAAACTGAAACAGTCCATAC+AGG | - | chr6.3:83634999-83635018 | None:intergenic | 35.0% | |
| TCATCATGACACTGATGTAT+TGG | + | chr6.3:83636169-83636188 | MS.gene75051:intron | 35.0% | |
| TGGAGGGACTAAATTGATTA+AGG | + | chr6.3:83636868-83636887 | MS.gene75051:intron | 35.0% | |
| TTTGGTCCTCGAAATTGTAA+AGG | - | chr6.3:83636953-83636972 | None:intergenic | 35.0% | |
| ! | GAATGGCTTTTAAATCTGCT+AGG | - | chr6.3:83635899-83635918 | None:intergenic | 35.0% |
| !! | TAATCAGCTACTGCTTTTGA+TGG | - | chr6.3:83637192-83637211 | None:intergenic | 35.0% |
| !!! | ATTGGTATTGATTTTGGCAG+AGG | + | chr6.3:83636187-83636206 | MS.gene75051:intron | 35.0% |
| !!! | CCAATTTTCCCTGCTTTTTT+AGG | + | chr6.3:83635795-83635814 | MS.gene75051:intron | 35.0% |
| !!! | GAACGAGATATTTTGATGGA+GGG | + | chr6.3:83636852-83636871 | MS.gene75051:intron | 35.0% |
| !!! | TGAACGAGATATTTTGATGG+AGG | + | chr6.3:83636851-83636870 | MS.gene75051:intron | 35.0% |
| !!! | TTATGACTTTTGGCCTTGTT+TGG | + | chr6.3:83635067-83635086 | MS.gene75051:intron | 35.0% |
| !!! | TTTTTAGGATGAACGAGAAG+CGG | + | chr6.3:83635872-83635891 | MS.gene75051:intron | 35.0% |
| AAATTGGCATCTGGTAGAAG+AGG | - | chr6.3:83635782-83635801 | None:intergenic | 40.0% | |
| AACTGCAAAACAGTGGTACA+CGG | + | chr6.3:83635689-83635708 | MS.gene75051:CDS | 40.0% | |
| ACCAAAAGAAGGCCAATAAC+TGG | - | chr6.3:83636539-83636558 | None:intergenic | 40.0% | |
| ACCTGTATTGTGTCTAGGAA+GGG | + | chr6.3:83636286-83636305 | MS.gene75051:intron | 40.0% | |
| ACTATGCCAGAACCAAAAGA+AGG | - | chr6.3:83636550-83636569 | None:intergenic | 40.0% | |
| ACTGGATATGAGTTACACAC+GGG | - | chr6.3:83636521-83636540 | None:intergenic | 40.0% | |
| AGATGTTGTCCAAAGTTTGG+TGG | + | chr6.3:83634882-83634901 | MS.gene75051:CDS | 40.0% | |
| AGTATACCTGAGGCAAACAT+AGG | - | chr6.3:83635468-83635487 | None:intergenic | 40.0% | |
| ATCAGAGATAGCTGTGCTTT+AGG | - | chr6.3:83637048-83637067 | None:intergenic | 40.0% | |
| GATTCTGAACTGCAAAACAG+TGG | + | chr6.3:83635682-83635701 | MS.gene75051:CDS | 40.0% | |
| GTCCTCGAAATTGTAAAGGT+CGG | - | chr6.3:83636949-83636968 | None:intergenic | 40.0% | |
| GTTTATGACACGTCCATAAG+TGG | - | chr6.3:83635302-83635321 | None:intergenic | 40.0% | |
| TAAACACACGCGAGATTGTT+TGG | - | chr6.3:83635342-83635361 | None:intergenic | 40.0% | |
| TGACTAATCACACCCTTCTT+GGG | - | chr6.3:83634853-83634872 | None:intergenic | 40.0% | |
| TGGGATACAATAGAGGGAAA+GGG | - | chr6.3:83635600-83635619 | None:intergenic | 40.0% | |
| TTCTGGCATAGTTGCATCAA+TGG | + | chr6.3:83636558-83636577 | MS.gene75051:intron | 40.0% | |
| TTGGGATACAATAGAGGGAA+AGG | - | chr6.3:83635601-83635620 | None:intergenic | 40.0% | |
| TTGTCACCTGTATTGTGTCT+AGG | + | chr6.3:83636281-83636300 | MS.gene75051:intron | 40.0% | |
| ! | AAGCATAACGAGTTGAAGGT+TGG | + | chr6.3:83635924-83635943 | MS.gene75051:intron | 40.0% |
| ! | CAATGTGAGGCACTAAAGAA+GGG | + | chr6.3:83635730-83635749 | MS.gene75051:CDS | 40.0% |
| ! | GATCAATGCTTACGATTTGG+AGG | - | chr6.3:83636650-83636669 | None:intergenic | 40.0% |
| !!! | TATTGGCCTTCTTTTGGTTC+TGG | + | chr6.3:83636541-83636560 | MS.gene75051:intron | 40.0% |
| !!! | TCCAGTTATTGGCCTTCTTT+TGG | + | chr6.3:83636535-83636554 | MS.gene75051:intron | 40.0% |
| AAAGAACTTCCCTCAGGCTA+AGG | + | chr6.3:83636433-83636452 | MS.gene75051:CDS | 45.0% | |
| AAGCAGGGAAAATTGGCATC+TGG | - | chr6.3:83635791-83635810 | None:intergenic | 45.0% | |
| ATTGCTCCTATGTTTGCCTC+AGG | + | chr6.3:83635459-83635478 | MS.gene75051:intron | 45.0% | |
| CACCTGTATTGTGTCTAGGA+AGG | + | chr6.3:83636285-83636304 | MS.gene75051:intron | 45.0% | |
| CTCACATTGCTCGACAAGTT+GGG | - | chr6.3:83635719-83635738 | None:intergenic | 45.0% | |
| CTCGTTATGCTTCAGCTGAA+TGG | - | chr6.3:83635916-83635935 | None:intergenic | 45.0% | |
| CTGACTAATCACACCCTTCT+TGG | - | chr6.3:83634854-83634873 | None:intergenic | 45.0% | |
| CTGGATATGAGTTACACACG+GGG | - | chr6.3:83636520-83636539 | None:intergenic | 45.0% | |
| GACCGACCTTTACAATTTCG+AGG | + | chr6.3:83636944-83636963 | MS.gene75051:intron | 45.0% | |
| GACTAATCACACCCTTCTTG+GGG | - | chr6.3:83634852-83634871 | None:intergenic | 45.0% | |
| GCTTCAGAACATGTACCAAG+AGG | + | chr6.3:83636460-83636479 | MS.gene75051:CDS | 45.0% | |
| GGTCATCATCCACCAAACTT+TGG | - | chr6.3:83634894-83634913 | None:intergenic | 45.0% | |
| GTGTTCAAAGAACTTCCCTC+AGG | + | chr6.3:83636427-83636446 | MS.gene75051:CDS | 45.0% | |
| GTTTGCCTCAGGTATACTTC+TGG | + | chr6.3:83635470-83635489 | MS.gene75051:intron | 45.0% | |
| TACCAATCTGCATGGTGACA+TGG | - | chr6.3:83637131-83637150 | None:intergenic | 45.0% | |
| TCCCTTCCTAGACACAATAC+AGG | - | chr6.3:83636290-83636309 | None:intergenic | 45.0% | |
| ! | AGACTCCAGAAGTATACCTG+AGG | - | chr6.3:83635478-83635497 | None:intergenic | 45.0% |
| ! | GCAATGTGAGGCACTAAAGA+AGG | + | chr6.3:83635729-83635748 | MS.gene75051:CDS | 45.0% |
| ! | GCTGAAGCATAACGAGTTGA+AGG | + | chr6.3:83635920-83635939 | MS.gene75051:CDS | 45.0% |
| !! | GCTACTGCTTTTGATGGAAG+AGG | - | chr6.3:83637186-83637205 | None:intergenic | 45.0% |
| CACCATGTCACCATGCAGAT+TGG | + | chr6.3:83637126-83637145 | MS.gene75051:intron | 50.0% | |
| CCAACTTGTCGAGCAATGTG+AGG | + | chr6.3:83635717-83635736 | MS.gene75051:CDS | 50.0% | |
| CCTCACATTGCTCGACAAGT+TGG | - | chr6.3:83635720-83635739 | None:intergenic | 50.0% | |
| CTCATGCAGCAGCTAACAGA+TGG | + | chr6.3:83636225-83636244 | MS.gene75051:CDS | 50.0% | |
| CTCATTGCTTCAAAGGCAGC+AGG | - | chr6.3:83636066-83636085 | None:intergenic | 50.0% | |
| GAAGCTGTTCCTTAGCCTGA+GGG | - | chr6.3:83636445-83636464 | None:intergenic | 50.0% | |
| GCAAACACGATGTGCAGCTT+AGG | + | chr6.3:83635641-83635660 | MS.gene75051:intron | 50.0% | |
| TGAAGCTGTTCCTTAGCCTG+AGG | - | chr6.3:83636446-83636465 | None:intergenic | 50.0% | |
| TTGTGTCTAGGAAGGGAGAG+TGG | + | chr6.3:83636293-83636312 | MS.gene75051:intron | 50.0% | |
| ACCTGATTTCCAGCGCAGCT+AGG | - | chr6.3:83635502-83635521 | None:intergenic | 55.0% | |
| CACACGGGGATTGCAGATTG+AGG | - | chr6.3:83636506-83636525 | None:intergenic | 55.0% | |
| GCAGCAGCTAACAGATGGAC+AGG | + | chr6.3:83636230-83636249 | MS.gene75051:CDS | 55.0% | |
| GGCACTAAAGAAGGGACGTG+AGG | + | chr6.3:83635738-83635757 | MS.gene75051:CDS | 55.0% | |
| TCCTAGCTGCGCTGGAAATC+AGG | + | chr6.3:83635498-83635517 | MS.gene75051:CDS | 55.0% | |
| TGGAGTCTTCCTAGCTGCGC+TGG | + | chr6.3:83635490-83635509 | MS.gene75051:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 83634844 | 83637212 | 83634844 | ID=MS.gene75051 |
| chr6.3 | mRNA | 83634844 | 83637212 | 83634844 | ID=MS.gene75051.t1;Parent=MS.gene75051 |
| chr6.3 | exon | 83634844 | 83634942 | 83634844 | ID=MS.gene75051.t1.exon1;Parent=MS.gene75051.t1 |
| chr6.3 | CDS | 83634844 | 83634942 | 83634844 | ID=cds.MS.gene75051.t1;Parent=MS.gene75051.t1 |
| chr6.3 | exon | 83635481 | 83635519 | 83635481 | ID=MS.gene75051.t1.exon2;Parent=MS.gene75051.t1 |
| chr6.3 | CDS | 83635481 | 83635519 | 83635481 | ID=cds.MS.gene75051.t1;Parent=MS.gene75051.t1 |
| chr6.3 | exon | 83635658 | 83635765 | 83635658 | ID=MS.gene75051.t1.exon3;Parent=MS.gene75051.t1 |
| chr6.3 | CDS | 83635658 | 83635765 | 83635658 | ID=cds.MS.gene75051.t1;Parent=MS.gene75051.t1 |
| chr6.3 | exon | 83635879 | 83635941 | 83635879 | ID=MS.gene75051.t1.exon4;Parent=MS.gene75051.t1 |
| chr6.3 | CDS | 83635879 | 83635941 | 83635879 | ID=cds.MS.gene75051.t1;Parent=MS.gene75051.t1 |
| chr6.3 | exon | 83636033 | 83636084 | 83636033 | ID=MS.gene75051.t1.exon5;Parent=MS.gene75051.t1 |
| chr6.3 | CDS | 83636033 | 83636084 | 83636033 | ID=cds.MS.gene75051.t1;Parent=MS.gene75051.t1 |
| chr6.3 | exon | 83636207 | 83636251 | 83636207 | ID=MS.gene75051.t1.exon6;Parent=MS.gene75051.t1 |
| chr6.3 | CDS | 83636207 | 83636251 | 83636207 | ID=cds.MS.gene75051.t1;Parent=MS.gene75051.t1 |
| chr6.3 | exon | 83636402 | 83636481 | 83636402 | ID=MS.gene75051.t1.exon7;Parent=MS.gene75051.t1 |
| chr6.3 | CDS | 83636402 | 83636481 | 83636402 | ID=cds.MS.gene75051.t1;Parent=MS.gene75051.t1 |
| chr6.3 | exon | 83637144 | 83637212 | 83637144 | ID=MS.gene75051.t1.exon8;Parent=MS.gene75051.t1 |
| chr6.3 | CDS | 83637144 | 83637212 | 83637144 | ID=cds.MS.gene75051.t1;Parent=MS.gene75051.t1 |
| Gene Sequence |
| Protein sequence |
