Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76102.t1 | XP_003616703.1 | 95 | 516 | 26 | 0 | 1 | 516 | 1 | 516 | 9.90E-258 | 899 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76102.t1 | Q8L5Z7 | 64.8 | 486 | 153 | 5 | 43 | 511 | 96 | 580 | 1.3e-162 | 574.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76102.t1 | G7K781 | 95.0 | 516 | 26 | 0 | 1 | 516 | 1 | 516 | 7.2e-258 | 899.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050646 | MS.gene76102 | 0.814137 | 1.80E-51 | -1.69E-46 |
| MS.gene051043 | MS.gene76102 | 0.826077 | 3.31E-54 | -1.69E-46 |
| MS.gene051902 | MS.gene76102 | 0.804626 | 1.97E-49 | -1.69E-46 |
| MS.gene052296 | MS.gene76102 | 0.80952 | 1.82E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene76102 | 0.816346 | 5.80E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76102.t1 | MTR_5g083370 | 97.674 | 516 | 12 | 0 | 1 | 516 | 1 | 516 | 0.0 | 1033 |
| MS.gene76102.t1 | MTR_5g073280 | 61.792 | 547 | 164 | 8 | 13 | 516 | 21 | 565 | 0.0 | 634 |
| MS.gene76102.t1 | MTR_1g059650 | 25.581 | 430 | 262 | 11 | 90 | 514 | 28 | 404 | 1.26e-20 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76102.t1 | AT5G58440 | 67.360 | 481 | 139 | 5 | 48 | 511 | 101 | 580 | 0.0 | 645 |
| MS.gene76102.t1 | AT5G07120 | 60.357 | 560 | 167 | 8 | 11 | 516 | 14 | 572 | 0.0 | 639 |
| MS.gene76102.t1 | AT5G07120 | 60.357 | 560 | 167 | 8 | 11 | 516 | 14 | 572 | 0.0 | 639 |
| MS.gene76102.t1 | AT5G07120 | 60.187 | 535 | 158 | 8 | 11 | 491 | 14 | 547 | 0.0 | 607 |
| MS.gene76102.t1 | AT5G06140 | 26.027 | 438 | 260 | 12 | 77 | 504 | 9 | 392 | 2.00e-23 | 102 |
Find 140 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGAAGATAAGGAGTTTA+TGG | 0.131203 | 5.2:+71396776 | MS.gene76102:CDS |
| TGGTGTAAGGAGGAGGTTTC+GGG | 0.165443 | 5.2:+71395888 | MS.gene76102:CDS |
| GGCTGCCACGGCAGCTGTTT+GGG | 0.165894 | 5.2:+71396622 | MS.gene76102:CDS |
| GAGAAGTATCTGAGGAAATT+AGG | 0.188004 | 5.2:+71396483 | MS.gene76102:CDS |
| GTTGCTTCATCCAGAATATT+TGG | 0.216818 | 5.2:+71398151 | MS.gene76102:CDS |
| AATGAATTGAACGGTGATTT+AGG | 0.226921 | 5.2:-71395631 | None:intergenic |
| AGGCTGCCACGGCAGCTGTT+TGG | 0.229002 | 5.2:+71396621 | MS.gene76102:CDS |
| CGGCGGTTGTTGAACGTTGC+CGG | 0.271445 | 5.2:-71395602 | None:intergenic |
| ATCCGATTCGATTCAGATTT+CGG | 0.277980 | 5.2:+71395762 | MS.gene76102:CDS |
| AGCTGTTTGGGGCGGAGAGT+GGG | 0.297842 | 5.2:+71396634 | MS.gene76102:CDS |
| CTTGTCTCCACCAAATATTC+TGG | 0.315427 | 5.2:-71398161 | None:intergenic |
| CAGCTGTTTGGGGCGGAGAG+TGG | 0.335447 | 5.2:+71396633 | MS.gene76102:CDS |
| TACGTTGTCGGAGCGGTTAT+CGG | 0.335566 | 5.2:+71395918 | MS.gene76102:CDS |
| AACAATCTGTTAGTAATGAT+TGG | 0.339972 | 5.2:+71396730 | MS.gene76102:CDS |
| TTGGTGTAAGGAGGAGGTTT+CGG | 0.349103 | 5.2:+71395887 | MS.gene76102:CDS |
| AGAAGTATCTGAGGAAATTA+GGG | 0.377649 | 5.2:+71396484 | MS.gene76102:CDS |
| AAGGAGGAGGTTTCGGGAGG+TGG | 0.379579 | 5.2:+71395894 | MS.gene76102:CDS |
| AAACTTTGCAGGAAAATAAT+AGG | 0.382071 | 5.2:+71400203 | MS.gene76102:intron |
| TTATCGTGGTTATGTGATTC+CGG | 0.384264 | 5.2:+71395945 | MS.gene76102:CDS |
| ACAATCTGTTAGTAATGATT+GGG | 0.384603 | 5.2:+71396731 | MS.gene76102:CDS |
| AACTCGAATCAAGCCGGATC+CGG | 0.388623 | 5.2:+71395727 | MS.gene76102:CDS |
| AACTAGCTTCTTTACATTCA+CGG | 0.389779 | 5.2:+71398113 | MS.gene76102:CDS |
| GTAACGAACTCGCTTGTTCC+TGG | 0.402201 | 5.2:+71395811 | MS.gene76102:CDS |
| ATCGGATTCCGTTCCCGATC+CGG | 0.405153 | 5.2:-71395746 | None:intergenic |
| TTAGGGTTGCATCCTGTGAT+TGG | 0.408182 | 5.2:+71396501 | MS.gene76102:CDS |
| TTCCGTTCCCGATCCGGATC+CGG | 0.411031 | 5.2:-71395740 | None:intergenic |
| GTGACTCCATTTCATCGTCT+TGG | 0.412162 | 5.2:-71395537 | None:intergenic |
| GCGAGGGTTTGTTGTCAATC+AGG | 0.412246 | 5.2:+71400279 | MS.gene76102:CDS |
| TCGGGAGGTGGTTACGTTGT+CGG | 0.422008 | 5.2:+71395906 | MS.gene76102:CDS |
| GGAGAAGAAGGATAAGTTGA+TGG | 0.424046 | 5.2:+71396797 | MS.gene76102:CDS |
| TGACTCCATTTCATCGTCTT+GGG | 0.429228 | 5.2:-71395536 | None:intergenic |
| GGAATTATCGCCGCCGTTGT+CGG | 0.430205 | 5.2:-71395578 | None:intergenic |
| TAAGGAGTTTATGGAGAAGA+AGG | 0.434834 | 5.2:+71396785 | MS.gene76102:CDS |
| CGGAGTTTGGTGTAAGGAGG+AGG | 0.443749 | 5.2:+71395881 | MS.gene76102:CDS |
| AACGGTGATTTAGGACTTTG+CGG | 0.447787 | 5.2:-71395622 | None:intergenic |
| TACACAAACAATCAAACATC+TGG | 0.453598 | 5.2:+71397846 | MS.gene76102:CDS |
| GATGCAGAAGGAGGAGTTTG+TGG | 0.457480 | 5.2:+71396440 | MS.gene76102:CDS |
| GATTCGAATCTCAAAGAGTA+AGG | 0.459427 | 5.2:+71397758 | MS.gene76102:CDS |
| GGTGAAACAATGGGTGAGCT+AGG | 0.463965 | 5.2:+71397691 | MS.gene76102:CDS |
| TGGCGTCAAGGATGCTTGAT+GGG | 0.464255 | 5.2:+71396592 | MS.gene76102:CDS |
| AATCAAGCCGGATCCGGATC+GGG | 0.465368 | 5.2:+71395733 | MS.gene76102:CDS |
| AAAGTGGAAGGGATTTGCTT+AGG | 0.466015 | 5.2:+71396691 | MS.gene76102:CDS |
| AAGCGCGAAGAACGTGATCT+TGG | 0.468626 | 5.2:-71395513 | None:intergenic |
| GTGGCGTCAAGGATGCTTGA+TGG | 0.468981 | 5.2:+71396591 | MS.gene76102:CDS |
| TAGGGTTGCATCCTGTGATT+GGG | 0.469279 | 5.2:+71396502 | MS.gene76102:CDS |
| CGCTTCCCAAGACGATGAAA+TGG | 0.471624 | 5.2:+71395531 | MS.gene76102:CDS |
| ATTGGTTGTTGAAGAAGATA+AGG | 0.471684 | 5.2:+71396767 | MS.gene76102:CDS |
| GTCAGCAAAAGCATTGTTGA+TGG | 0.489842 | 5.2:-71398050 | None:intergenic |
| GCTGCCACGGCAGCTGTTTG+GGG | 0.491006 | 5.2:+71396623 | MS.gene76102:CDS |
| ACTTAGCAATGTTTCTCAGC+AGG | 0.492076 | 5.2:+71396833 | MS.gene76102:CDS |
| GCTGTTTGGGGCGGAGAGTG+GGG | 0.492352 | 5.2:+71396635 | MS.gene76102:CDS |
| TTATCTTCTTCAACAACCAA+TGG | 0.498912 | 5.2:-71396765 | None:intergenic |
| TTTGAATGATGTGGCTCAGC+CGG | 0.506966 | 5.2:+71396665 | MS.gene76102:CDS |
| AACCGAAATCTGAATCGAAT+CGG | 0.507244 | 5.2:-71395764 | None:intergenic |
| GGAGCAGAGGAGATTAGCGT+TGG | 0.508817 | 5.2:+71396461 | MS.gene76102:CDS |
| GGCAGGCTATGCAGAGAAGA+TGG | 0.512741 | 5.2:+71400402 | MS.gene76102:intron |
| GCAAGACATGGGTGAAACAA+TGG | 0.520277 | 5.2:+71397681 | MS.gene76102:CDS |
| AGCCGGATCCGGATCGGGAA+CGG | 0.521381 | 5.2:+71395738 | MS.gene76102:CDS |
| CTGCAGCTGTCAAAGCAAGC+AGG | 0.522471 | 5.2:+71397806 | MS.gene76102:CDS |
| CAAGACATGGGTGAAACAAT+GGG | 0.522777 | 5.2:+71397682 | MS.gene76102:CDS |
| GCCAAGTACATTCTAGCTGC+TGG | 0.523202 | 5.2:-71400473 | None:intergenic |
| TCCTCACTCTTCCCAATCAC+AGG | 0.526809 | 5.2:-71396513 | None:intergenic |
| TTGAAAGAATTGACAAGGAA+AGG | 0.529294 | 5.2:+71400233 | MS.gene76102:CDS |
| GATAAACTCCACGAATACCT+TGG | 0.530791 | 5.2:+71398016 | MS.gene76102:CDS |
| ATAAACTCCACGAATACCTT+GGG | 0.530869 | 5.2:+71398017 | MS.gene76102:CDS |
| GTTACCTCTTGCTCCTCTTG+AGG | 0.531300 | 5.2:-71395793 | None:intergenic |
| GTGGCTCAGCCGGCGAAAAG+TGG | 0.533089 | 5.2:+71396675 | MS.gene76102:CDS |
| GAATCAAGCCGGATCCGGAT+CGG | 0.536739 | 5.2:+71395732 | MS.gene76102:CDS |
| CGGAGAAAAGTTCGGTAGAG+AGG | 0.538061 | 5.2:+71395974 | MS.gene76102:CDS |
| CTCAGCCGGCGAAAAGTGGA+AGG | 0.538183 | 5.2:+71396679 | MS.gene76102:CDS |
| ATGGGGCGGTGAGGCTGCCA+CGG | 0.539166 | 5.2:+71396610 | MS.gene76102:CDS |
| AAGATTGCTTCAGCGTAAGA+AGG | 0.540494 | 5.2:-71395664 | None:intergenic |
| GGTTGTTGATTTGAATGATG+TGG | 0.541262 | 5.2:+71396656 | MS.gene76102:CDS |
| TAGAGAGTATGAACGAATCA+AGG | 0.545450 | 5.2:+71398255 | MS.gene76102:CDS |
| TGTCAAGTTTCAGCAAGACA+TGG | 0.545641 | 5.2:+71397669 | MS.gene76102:CDS |
| TAGGGTTTGATCGTGACCGT+TGG | 0.545881 | 5.2:-71395701 | None:intergenic |
| GTTGATGAGGACGACGGATG+TGG | 0.546141 | 5.2:+71396572 | MS.gene76102:CDS |
| TTATGTGATTCCGGTGAGGC+CGG | 0.549014 | 5.2:+71395954 | MS.gene76102:CDS |
| TCCGCCCCAAACAGCTGCCG+TGG | 0.549263 | 5.2:-71396627 | None:intergenic |
| GGTGAGGCCGGAGAAAAGTT+CGG | 0.551056 | 5.2:+71395966 | MS.gene76102:CDS |
| AACGGCGGCGATAATTCCTC+CGG | 0.554692 | 5.2:+71395583 | MS.gene76102:CDS |
| GAAAAGTTCGGTAGAGAGGA+AGG | 0.555027 | 5.2:+71395978 | MS.gene76102:CDS |
| AGGAGGAGTTTGTGGAGCAG+AGG | 0.558001 | 5.2:+71396448 | MS.gene76102:CDS |
| GCATTGTCCCAAGGTATTCG+TGG | 0.559449 | 5.2:-71398024 | None:intergenic |
| GTCAAGGATGCTTGATGGGG+CGG | 0.562029 | 5.2:+71396596 | MS.gene76102:CDS |
| GCCACGGCAGCTGTTTGGGG+CGG | 0.564908 | 5.2:+71396626 | MS.gene76102:CDS |
| CTGTCAACAATGCACTTGAT+CGG | 0.565466 | 5.2:-71398072 | None:intergenic |
| AAATTTGAGACAGAAGAAGC+TGG | 0.565488 | 5.2:+71397736 | MS.gene76102:CDS |
| CACGACGACGCCGACAACGG+CGG | 0.577601 | 5.2:+71395568 | MS.gene76102:CDS |
| AGCACTCTCAGTTACTCTAA+CGG | 0.577710 | 5.2:-71398218 | None:intergenic |
| GCTTCATCCAGAATATTTGG+TGG | 0.579181 | 5.2:+71398154 | MS.gene76102:CDS |
| AAGGGAAGTTGCCGTTGATG+AGG | 0.580166 | 5.2:+71396559 | MS.gene76102:CDS |
| TTCGGTTTCTGATCCTCAAG+AGG | 0.582017 | 5.2:+71395780 | MS.gene76102:CDS |
| AGAGAAGATGGCTGCTGTGT+GGG | 0.582156 | 5.2:+71400414 | MS.gene76102:CDS |
| GTCAAGTTTCAGCAAGACAT+GGG | 0.591750 | 5.2:+71397670 | MS.gene76102:CDS |
| CGCCGTTGTCGGCGTCGTCG+TGG | 0.591851 | 5.2:-71395567 | None:intergenic |
| AACAATGGGTGAGCTAGGGT+TGG | 0.592568 | 5.2:+71397696 | MS.gene76102:CDS |
| TTGGGGAGGTGCTAAGCCAT+TGG | 0.595216 | 5.2:+71396749 | MS.gene76102:CDS |
| TGCTGTGTGGGAAAAGCTTG+CGG | 0.596149 | 5.2:+71400426 | MS.gene76102:CDS |
| ACTTTCAAAACATGCTGCGA+GGG | 0.598205 | 5.2:+71400263 | MS.gene76102:CDS |
| TTCACTTCATTCGACACCAA+CGG | 0.599087 | 5.2:+71395685 | MS.gene76102:CDS |
| TATTTGGTGGAGACAAGTCT+AGG | 0.601151 | 5.2:+71398167 | MS.gene76102:CDS |
| TGTAAGGAGGAGGTTTCGGG+AGG | 0.601303 | 5.2:+71395891 | MS.gene76102:CDS |
| GTTGTCGGAGCGGTTATCGG+AGG | 0.601385 | 5.2:+71395921 | MS.gene76102:CDS |
| GGATGCTTGATGGGGCGGTG+AGG | 0.604410 | 5.2:+71396601 | MS.gene76102:CDS |
| AATCGGAGTTTGGTGTAAGG+AGG | 0.604994 | 5.2:+71395878 | MS.gene76102:CDS |
| CGGTTGTTGAACGTTGCCGG+AGG | 0.608629 | 5.2:-71395599 | None:intergenic |
| CTCCACGACGACGCCGACAA+CGG | 0.609403 | 5.2:+71395565 | MS.gene76102:CDS |
| GGCGTCAAGGATGCTTGATG+GGG | 0.610367 | 5.2:+71396593 | MS.gene76102:CDS |
| ACATCCGTCGTCCTCATCAA+CGG | 0.610443 | 5.2:-71396570 | None:intergenic |
| CTAGAAAACTCGAATCAAGC+CGG | 0.614203 | 5.2:+71395721 | MS.gene76102:CDS |
| CGGTTATCGGAGGTTTATCG+TGG | 0.619246 | 5.2:+71395931 | MS.gene76102:CDS |
| GGACGACGGATGTGGCGTCA+AGG | 0.620316 | 5.2:+71396580 | MS.gene76102:CDS |
| GTGAAACAATGGGTGAGCTA+GGG | 0.620469 | 5.2:+71397692 | MS.gene76102:CDS |
| GACTTTCAAAACATGCTGCG+AGG | 0.622052 | 5.2:+71400262 | MS.gene76102:CDS |
| TGATCCTCAAGAGGAGCAAG+AGG | 0.633181 | 5.2:+71395789 | MS.gene76102:CDS |
| CTATCAGGTGATGCAGAAGG+AGG | 0.634617 | 5.2:+71396431 | MS.gene76102:intron |
| ATTCTATCAGGTGATGCAGA+AGG | 0.635217 | 5.2:+71396428 | MS.gene76102:intron |
| TGTCTTGCTGAAACTTGACA+AGG | 0.636299 | 5.2:-71397666 | None:intergenic |
| ATTCGAATCTCAAAGAGTAA+GGG | 0.642233 | 5.2:+71397759 | MS.gene76102:CDS |
| ACGAACTCGCTTGTTCCTGG+TGG | 0.643939 | 5.2:+71395814 | MS.gene76102:CDS |
| GTCTTGCTGAAACTTGACAA+GGG | 0.646463 | 5.2:-71397665 | None:intergenic |
| CAATCTGTTAGTAATGATTG+GGG | 0.646740 | 5.2:+71396732 | MS.gene76102:CDS |
| CGTTGTCGGCGTCGTCGTGG+AGG | 0.648470 | 5.2:-71395564 | None:intergenic |
| GGATCGAGGAATGAATTGAA+CGG | 0.649991 | 5.2:-71395640 | None:intergenic |
| TCAGCCGGCGAAAAGTGGAA+GGG | 0.652000 | 5.2:+71396680 | MS.gene76102:CDS |
| ATTGCTTCAGCGTAAGAAGG+AGG | 0.654082 | 5.2:-71395661 | None:intergenic |
| TGATGGCTAGCATTGTCCCA+AGG | 0.654220 | 5.2:-71398033 | None:intergenic |
| TGAGCTTGAAAGAATTGACA+AGG | 0.655714 | 5.2:+71400228 | MS.gene76102:CDS |
| AGGTGGTTACGTTGTCGGAG+CGG | 0.656214 | 5.2:+71395911 | MS.gene76102:CDS |
| CAGCGTAAGAAGGAGGATCG+AGG | 0.672129 | 5.2:-71395654 | None:intergenic |
| TAGCGTTGGAGAAGTATCTG+AGG | 0.672262 | 5.2:+71396475 | MS.gene76102:CDS |
| CAGAGAAGATGGCTGCTGTG+TGG | 0.678220 | 5.2:+71400413 | MS.gene76102:CDS |
| GTATGATAACTACTTCCACC+AGG | 0.685228 | 5.2:-71395829 | None:intergenic |
| TCTGTTAGTAATGATTGGGG+AGG | 0.700339 | 5.2:+71396735 | MS.gene76102:CDS |
| TCCTGTGATTGGGAAGAGTG+AGG | 0.720504 | 5.2:+71396512 | MS.gene76102:CDS |
| GTGGTTATGTGATTCCGGTG+AGG | 0.721489 | 5.2:+71395950 | MS.gene76102:CDS |
| GTTGCCGTTGATGAGGACGA+CGG | 0.733554 | 5.2:+71396566 | MS.gene76102:CDS |
| GGTGATTTAGGACTTTGCGG+CGG | 0.746382 | 5.2:-71395619 | None:intergenic |
| ATACGTATCTGATTACGACG+AGG | 0.794773 | 5.2:+71395848 | MS.gene76102:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGTTAATTACAATAAA+TGG | - | chr5.2:71396346-71396365 | None:intergenic | 10.0% |
| !!! | AAAAAGAAAAAATAGTTTTA+AGG | + | chr5.2:71400120-71400139 | MS.gene76102:intron | 10.0% |
| !!! | AAAAATACATTTTTTGTATT+CGG | + | chr5.2:71398284-71398303 | MS.gene76102:intron | 10.0% |
| !! | ATTTACATATTGTTTCAAAA+AGG | - | chr5.2:71400163-71400182 | None:intergenic | 15.0% |
| !! | TCATCATACAATTATATAAT+TGG | - | chr5.2:71397916-71397935 | None:intergenic | 15.0% |
| !!! | ATAGAAATACAGATTTTAAA+TGG | - | chr5.2:71400096-71400115 | None:intergenic | 15.0% |
| !! | AATAATATCAAGTGTAAATG+TGG | + | chr5.2:71400180-71400199 | MS.gene76102:intron | 20.0% |
| !! | ACTAAACATGATATAATAGT+CGG | + | chr5.2:71397441-71397460 | MS.gene76102:intron | 20.0% |
| !! | CAAAATATTGATATTAAGCA+CGG | - | chr5.2:71396405-71396424 | None:intergenic | 20.0% |
| !! | GACAATAATCTTCATAATAA+TGG | - | chr5.2:71398460-71398479 | None:intergenic | 20.0% |
| !! | TATAGACACATGAATATATA+TGG | - | chr5.2:71398433-71398452 | None:intergenic | 20.0% |
| !! | TCAAAAATCAAAATCACTAA+AGG | - | chr5.2:71399907-71399926 | None:intergenic | 20.0% |
| !! | TTAATTACAATAAATGGTGT+CGG | - | chr5.2:71396340-71396359 | None:intergenic | 20.0% |
| !! | TTATCAAAATCATCAAATAG+TGG | + | chr5.2:71399073-71399092 | MS.gene76102:intron | 20.0% |
| !!! | AATATTTTGCATATTCTATC+AGG | + | chr5.2:71396416-71396435 | MS.gene76102:intron | 20.0% |
| !!! | AATCATTGGATTTTACATAT+AGG | - | chr5.2:71398933-71398952 | None:intergenic | 20.0% |
| !!! | ACAAGATTTTAAATGATCAT+TGG | - | chr5.2:71397352-71397371 | None:intergenic | 20.0% |
| !!! | ATCATTTAAAATCTTGTTTG+TGG | + | chr5.2:71397355-71397374 | MS.gene76102:intron | 20.0% |
| !!! | ATTCTGGTTTTTTAAATCAT+TGG | - | chr5.2:71398947-71398966 | None:intergenic | 20.0% |
| !!! | GTAGAATCAATTATCAATTT+TGG | + | chr5.2:71396229-71396248 | MS.gene76102:intron | 20.0% |
| !!! | TCTTTGATAATCTAATTAGA+TGG | - | chr5.2:71398640-71398659 | None:intergenic | 20.0% |
| !!! | TTTTACAAATGCATCAAAAT+TGG | - | chr5.2:71398813-71398832 | None:intergenic | 20.0% |
| !!! | TTTTATACTTGTTATGTACT+TGG | - | chr5.2:71399272-71399291 | None:intergenic | 20.0% |
| ! | AAACTTTGCAGGAAAATAAT+AGG | + | chr5.2:71400203-71400222 | MS.gene76102:intron | 25.0% |
| ! | AAATCATAAGATAGGTTCAA+AGG | - | chr5.2:71399984-71400003 | None:intergenic | 25.0% |
| ! | AACAATCTGTTAGTAATGAT+TGG | + | chr5.2:71396730-71396749 | MS.gene76102:CDS | 25.0% |
| ! | ACAATCTGTTAGTAATGATT+GGG | + | chr5.2:71396731-71396750 | MS.gene76102:CDS | 25.0% |
| ! | AGTAAAATGTAGATTCATTG+TGG | + | chr5.2:71396926-71396945 | MS.gene76102:intron | 25.0% |
| ! | ATGTGATGTTAGTTAAAAGT+AGG | + | chr5.2:71397106-71397125 | MS.gene76102:intron | 25.0% |
| ! | CCTTTATAGATGGATAAAAA+GGG | - | chr5.2:71399695-71399714 | None:intergenic | 25.0% |
| ! | CTCAATGATCAATAAAACAT+AGG | - | chr5.2:71399162-71399181 | None:intergenic | 25.0% |
| ! | CTTTATAGATGGATAAAAAG+GGG | - | chr5.2:71399694-71399713 | None:intergenic | 25.0% |
| ! | GCTTTCATAAATCATAAGAT+AGG | - | chr5.2:71399992-71400011 | None:intergenic | 25.0% |
| ! | TAAACAAAATCAGATATCAG+AGG | - | chr5.2:71396886-71396905 | None:intergenic | 25.0% |
| ! | TAGATATGCCTAAAATGATT+AGG | + | chr5.2:71399631-71399650 | MS.gene76102:intron | 25.0% |
| ! | TATGTTAGTTGCAAATTAGT+CGG | + | chr5.2:71396018-71396037 | MS.gene76102:intron | 25.0% |
| ! | TGATGCATTTAATTCAAAGT+AGG | + | chr5.2:71397017-71397036 | MS.gene76102:intron | 25.0% |
| ! | TGTGTCAAATTATCAAATAG+TGG | - | chr5.2:71398540-71398559 | None:intergenic | 25.0% |
| !! | ATTTTACTTCTTTGATTGCT+AGG | + | chr5.2:71397597-71397616 | MS.gene76102:intron | 25.0% |
| !! | TAATATTTTATGTGTGTTGC+AGG | + | chr5.2:71397994-71398013 | MS.gene76102:intron | 25.0% |
| !! | TAGGATTTTACATAATGAGA+TGG | - | chr5.2:71399143-71399162 | None:intergenic | 25.0% |
| !! | TGGAACTGAATTAATTGTTT+TGG | + | chr5.2:71397562-71397581 | MS.gene76102:intron | 25.0% |
| !! | TTTTACTTCTTTGATTGCTA+GGG | + | chr5.2:71397598-71397617 | MS.gene76102:intron | 25.0% |
| !!! | CTGAATTAATTGTTTTGGAA+TGG | + | chr5.2:71397567-71397586 | MS.gene76102:intron | 25.0% |
| !!! | TCTGATTTTGTTTACGAAAA+AGG | + | chr5.2:71396892-71396911 | MS.gene76102:intron | 25.0% |
| !!! | TTTTAACTAACATCACATTG+CGG | - | chr5.2:71397104-71397123 | None:intergenic | 25.0% |
| AAAGGTTCATAACCACAATA+TGG | + | chr5.2:71397061-71397080 | MS.gene76102:intron | 30.0% | |
| AAGAAAAGAGAAGATAAACG+AGG | - | chr5.2:71400309-71400328 | None:intergenic | 30.0% | |
| AAGGTTCATAACCACAATAT+GGG | + | chr5.2:71397062-71397081 | MS.gene76102:intron | 30.0% | |
| AAGTTCAAGTGATTCATGTT+TGG | + | chr5.2:71396122-71396141 | MS.gene76102:intron | 30.0% | |
| AATGAATTGAACGGTGATTT+AGG | - | chr5.2:71395634-71395653 | None:intergenic | 30.0% | |
| AATTGCATTGCATTATAGAG+AGG | - | chr5.2:71398734-71398753 | None:intergenic | 30.0% | |
| ACAATTCACTAATCCAATCA+GGG | + | chr5.2:71399200-71399219 | MS.gene76102:intron | 30.0% | |
| AGAAAAGAGAAGATAAACGA+GGG | - | chr5.2:71400308-71400327 | None:intergenic | 30.0% | |
| AGACAGCTAAAGATTATACT+TGG | - | chr5.2:71397956-71397975 | None:intergenic | 30.0% | |
| AGTGCTTAAAATTTCAACAC+AGG | + | chr5.2:71399317-71399336 | MS.gene76102:intron | 30.0% | |
| ATCCAAGGTATAACTTAACA+TGG | + | chr5.2:71399385-71399404 | MS.gene76102:intron | 30.0% | |
| ATCCATGTTAAGTTATACCT+TGG | - | chr5.2:71399390-71399409 | None:intergenic | 30.0% | |
| ATGTTGATATGTATGCTGAA+GGG | - | chr5.2:71398372-71398391 | None:intergenic | 30.0% | |
| ATTCGAATCTCAAAGAGTAA+GGG | + | chr5.2:71397759-71397778 | MS.gene76102:CDS | 30.0% | |
| ATTGGTTGTTGAAGAAGATA+AGG | + | chr5.2:71396767-71396786 | MS.gene76102:CDS | 30.0% | |
| CAATCTGTTAGTAATGATTG+GGG | + | chr5.2:71396732-71396751 | MS.gene76102:CDS | 30.0% | |
| CCAAATTAGCTATTACATTC+TGG | - | chr5.2:71398963-71398982 | None:intergenic | 30.0% | |
| CCAGAATGTAATAGCTAATT+TGG | + | chr5.2:71398960-71398979 | MS.gene76102:intron | 30.0% | |
| GCCTTTATAGATGGATAAAA+AGG | - | chr5.2:71399696-71399715 | None:intergenic | 30.0% | |
| GTCTTTATAGACAAGTTTCA+TGG | + | chr5.2:71398754-71398773 | MS.gene76102:intron | 30.0% | |
| TACAATTCACTAATCCAATC+AGG | + | chr5.2:71399199-71399218 | MS.gene76102:intron | 30.0% | |
| TACACAAACAATCAAACATC+TGG | + | chr5.2:71397846-71397865 | MS.gene76102:CDS | 30.0% | |
| TACCAGTCAAATTTATACCA+GGG | - | chr5.2:71398684-71398703 | None:intergenic | 30.0% | |
| TATGTTGATATGTATGCTGA+AGG | - | chr5.2:71398373-71398392 | None:intergenic | 30.0% | |
| TCATCAATCAATAGCTGATT+TGG | + | chr5.2:71398870-71398889 | MS.gene76102:intron | 30.0% | |
| TCCTAACCTCAAATTAACTT+TGG | - | chr5.2:71397224-71397243 | None:intergenic | 30.0% | |
| TGAAGAAGATAAGGAGTTTA+TGG | + | chr5.2:71396776-71396795 | MS.gene76102:CDS | 30.0% | |
| TGCAAGCATACAATATAAGT+TGG | + | chr5.2:71399230-71399249 | MS.gene76102:intron | 30.0% | |
| TTATCAAATAGTGGTAGATC+TGG | - | chr5.2:71398531-71398550 | None:intergenic | 30.0% | |
| TTATCTTCTTCAACAACCAA+TGG | - | chr5.2:71396768-71396787 | None:intergenic | 30.0% | |
| TTGAAAGAATTGACAAGGAA+AGG | + | chr5.2:71400233-71400252 | MS.gene76102:CDS | 30.0% | |
| TTGTGGTGTAATCAAGTATT+AGG | + | chr5.2:71397372-71397391 | MS.gene76102:intron | 30.0% | |
| ! | AACTAGCTTCTTTACATTCA+CGG | + | chr5.2:71398113-71398132 | MS.gene76102:CDS | 30.0% |
| ! | ATGGTAATGCAATTCTTCAA+AGG | - | chr5.2:71397531-71397550 | None:intergenic | 30.0% |
| ! | CCCTTTTTATCCATCTATAA+AGG | + | chr5.2:71399692-71399711 | MS.gene76102:intron | 30.0% |
| ! | CTACAAAGCCTAATCATTTT+AGG | - | chr5.2:71399642-71399661 | None:intergenic | 30.0% |
| ! | GTTTATCTTCTCTTTTCTTC+AGG | + | chr5.2:71400310-71400329 | MS.gene76102:intron | 30.0% |
| ! | TCAAAGTAGGTTTGAAGTTA+GGG | + | chr5.2:71397030-71397049 | MS.gene76102:intron | 30.0% |
| ! | TCCAAAGTTAATTTGAGGTT+AGG | + | chr5.2:71397220-71397239 | MS.gene76102:intron | 30.0% |
| ! | TGTCTTTTTCTGTTGTTGAT+GGG | + | chr5.2:71397971-71397990 | MS.gene76102:intron | 30.0% |
| ! | TTAGCTCCAAAGTTAATTTG+AGG | + | chr5.2:71397215-71397234 | MS.gene76102:intron | 30.0% |
| ! | TTCAAAGTAGGTTTGAAGTT+AGG | + | chr5.2:71397029-71397048 | MS.gene76102:intron | 30.0% |
| !! | AGAAGTATCTGAGGAAATTA+GGG | + | chr5.2:71396484-71396503 | MS.gene76102:CDS | 30.0% |
| !! | AGTTTGAGACTTCATTTTGT+TGG | - | chr5.2:71399758-71399777 | None:intergenic | 30.0% |
| !! | ATACAATATAAGTTGGTGAG+TGG | + | chr5.2:71399237-71399256 | MS.gene76102:intron | 30.0% |
| !! | ATACTTGTTATGTACTTGGT+TGG | - | chr5.2:71399268-71399287 | None:intergenic | 30.0% |
| !! | ATGAGTCTTTAACTTGATTG+TGG | + | chr5.2:71399597-71399616 | MS.gene76102:intron | 30.0% |
| !! | GTTTGAGACTTCATTTTGTT+GGG | - | chr5.2:71399757-71399776 | None:intergenic | 30.0% |
| !! | TCTAGTGTCATTGTGTTTTA+TGG | + | chr5.2:71397485-71397504 | MS.gene76102:intron | 30.0% |
| !!! | CATATTTTTGCTTTTAGAGC+TGG | + | chr5.2:71398389-71398408 | MS.gene76102:intron | 30.0% |
| !!! | GAAGTTAGGGTTTTAGAAAA+AGG | + | chr5.2:71397043-71397062 | MS.gene76102:intron | 30.0% |
| AAAAAAGAATTGCGTCTGCA+TGG | + | chr5.2:71397249-71397268 | MS.gene76102:intron | 35.0% | |
| AACCGAAATCTGAATCGAAT+CGG | - | chr5.2:71395767-71395786 | None:intergenic | 35.0% | |
| AACTAATCCAAGTGTGTGTT+TGG | - | chr5.2:71396272-71396291 | None:intergenic | 35.0% | |
| AACTTGACTTCTAAATCTGC+TGG | + | chr5.2:71398904-71398923 | MS.gene76102:intron | 35.0% | |
| AATCAAACATCTGGTTAGTG+CGG | + | chr5.2:71397855-71397874 | MS.gene76102:intron | 35.0% | |
| AATCGAAGTTACAGATGCTA+AGG | - | chr5.2:71398321-71398340 | None:intergenic | 35.0% | |
| ACTTATCCATAAGGTTATGC+AGG | - | chr5.2:71398610-71398629 | None:intergenic | 35.0% | |
| ACTTGAATAGAATGCGAGTT+TGG | + | chr5.2:71399564-71399583 | MS.gene76102:intron | 35.0% | |
| AGAAAACACAGACATAACCA+TGG | + | chr5.2:71399780-71399799 | MS.gene76102:intron | 35.0% | |
| ATAAACTCCACGAATACCTT+GGG | + | chr5.2:71398017-71398036 | MS.gene76102:CDS | 35.0% | |
| ATCGAAGTTACAGATGCTAA+GGG | - | chr5.2:71398320-71398339 | None:intergenic | 35.0% | |
| ATGAATCAAATGGCAATGAG+GGG | + | chr5.2:71399852-71399871 | MS.gene76102:intron | 35.0% | |
| ATTCAGATATGACCCAAGTA+TGG | - | chr5.2:71397307-71397326 | None:intergenic | 35.0% | |
| CAAAATCACTAAAGGCCAAA+GGG | - | chr5.2:71399899-71399918 | None:intergenic | 35.0% | |
| CAACTTCAAATTGTGATGCT+AGG | + | chr5.2:71400018-71400037 | MS.gene76102:intron | 35.0% | |
| CAATAACCTGCATAACCTTA+TGG | + | chr5.2:71398601-71398620 | MS.gene76102:intron | 35.0% | |
| CAGCTAAAGATTATACTTGG+AGG | - | chr5.2:71397953-71397972 | None:intergenic | 35.0% | |
| CATAACAAGTATAAAAGCCG+AGG | + | chr5.2:71399276-71399295 | MS.gene76102:intron | 35.0% | |
| CGCATTCTATTCAAGTCTAT+AGG | - | chr5.2:71399560-71399579 | None:intergenic | 35.0% | |
| CTACCAGTCAAATTTATACC+AGG | - | chr5.2:71398685-71398704 | None:intergenic | 35.0% | |
| CTTGAATAGAATGCGAGTTT+GGG | + | chr5.2:71399565-71399584 | MS.gene76102:intron | 35.0% | |
| GAGATATCAAACCCATATTG+TGG | - | chr5.2:71397076-71397095 | None:intergenic | 35.0% | |
| GATGAATCAAATGGCAATGA+GGG | + | chr5.2:71399851-71399870 | MS.gene76102:intron | 35.0% | |
| GATTCGAATCTCAAAGAGTA+AGG | + | chr5.2:71397758-71397777 | MS.gene76102:CDS | 35.0% | |
| GCATAACAAGTTCAAACTGA+TGG | - | chr5.2:71399945-71399964 | None:intergenic | 35.0% | |
| GTTAAAAGTAGGACTCATTG+TGG | + | chr5.2:71397117-71397136 | MS.gene76102:intron | 35.0% | |
| GTTGCTTCATCCAGAATATT+TGG | + | chr5.2:71398151-71398170 | MS.gene76102:CDS | 35.0% | |
| TAAGGAGTTTATGGAGAAGA+AGG | + | chr5.2:71396785-71396804 | MS.gene76102:CDS | 35.0% | |
| TCAAAATCACTAAAGGCCAA+AGG | - | chr5.2:71399900-71399919 | None:intergenic | 35.0% | |
| TCAACTAGACGAAAGAGAAA+AGG | - | chr5.2:71397413-71397432 | None:intergenic | 35.0% | |
| TCATCAAATAGTGGTAGATC+TGG | + | chr5.2:71399082-71399101 | MS.gene76102:intron | 35.0% | |
| TGAGCTTGAAAGAATTGACA+AGG | + | chr5.2:71400228-71400247 | MS.gene76102:CDS | 35.0% | |
| TGATGAATCAAATGGCAATG+AGG | + | chr5.2:71399850-71399869 | MS.gene76102:intron | 35.0% | |
| TGTAAATGTGGAAACTTTGC+AGG | + | chr5.2:71400192-71400211 | MS.gene76102:intron | 35.0% | |
| TGTTGATATGTATGCTGAAG+GGG | - | chr5.2:71398371-71398390 | None:intergenic | 35.0% | |
| TTATCGTGGTTATGTGATTC+CGG | + | chr5.2:71395945-71395964 | MS.gene76102:CDS | 35.0% | |
| TTCAAATTGTGATGCTAGGT+TGG | + | chr5.2:71400022-71400041 | MS.gene76102:intron | 35.0% | |
| TTGAATAGAATGCGAGTTTG+GGG | + | chr5.2:71399566-71399585 | MS.gene76102:intron | 35.0% | |
| ! | AAATTTGAGACAGAAGAAGC+TGG | + | chr5.2:71397736-71397755 | MS.gene76102:CDS | 35.0% |
| ! | AACTGATGGACAAAATCACA+AGG | - | chr5.2:71399931-71399950 | None:intergenic | 35.0% |
| ! | AATTGATTCTACTCGAAGCT+AGG | - | chr5.2:71396221-71396240 | None:intergenic | 35.0% |
| ! | ATCCGATTCGATTCAGATTT+CGG | + | chr5.2:71395762-71395781 | MS.gene76102:CDS | 35.0% |
| ! | CTGTCTTTTTCTGTTGTTGA+TGG | + | chr5.2:71397970-71397989 | MS.gene76102:intron | 35.0% |
| ! | TAGAGAGTATGAACGAATCA+AGG | + | chr5.2:71398255-71398274 | MS.gene76102:CDS | 35.0% |
| ! | TCATTTGCTGCCTTTATAGA+TGG | - | chr5.2:71399705-71399724 | None:intergenic | 35.0% |
| ! | TGTTTGGTTCCATTTCTAGA+GGG | - | chr5.2:71396256-71396275 | None:intergenic | 35.0% |
| ! | TTCATTTTGTTGGGAGCTAT+GGG | - | chr5.2:71399748-71399767 | None:intergenic | 35.0% |
| !! | AAAAATCGGAGTTTGGTGTA+AGG | + | chr5.2:71395875-71395894 | MS.gene76102:CDS | 35.0% |
| !! | GAGAAGTATCTGAGGAAATT+AGG | + | chr5.2:71396483-71396502 | MS.gene76102:CDS | 35.0% |
| !! | GGATTTGCTTAGGATTTTCA+AGG | + | chr5.2:71396701-71396720 | MS.gene76102:CDS | 35.0% |
| !! | GGTTGTTGATTTGAATGATG+TGG | + | chr5.2:71396656-71396675 | MS.gene76102:CDS | 35.0% |
| !! | TGGATTAGTTGCAAGTTAGT+TGG | + | chr5.2:71396282-71396301 | MS.gene76102:intron | 35.0% |
| !!! | ATGCAGACGCAATTCTTTTT+TGG | - | chr5.2:71397250-71397269 | None:intergenic | 35.0% |
| !!! | CATTACCATTTTTTGTCACG+TGG | + | chr5.2:71397542-71397561 | MS.gene76102:intron | 35.0% |
| AAGATTGCTTCAGCGTAAGA+AGG | - | chr5.2:71395667-71395686 | None:intergenic | 40.0% | |
| AATGGAACCAAACACACACT+TGG | + | chr5.2:71396262-71396281 | MS.gene76102:intron | 40.0% | |
| ACCATACATGAGATAGTGAG+TGG | + | chr5.2:71399359-71399378 | MS.gene76102:intron | 40.0% | |
| ACTAATCCAATCAGGGTTGA+TGG | + | chr5.2:71399207-71399226 | MS.gene76102:intron | 40.0% | |
| ACTGCAATGTGACCATACTT+GGG | + | chr5.2:71397292-71397311 | MS.gene76102:intron | 40.0% | |
| ACTTAGCAATGTTTCTCAGC+AGG | + | chr5.2:71396833-71396852 | MS.gene76102:CDS | 40.0% | |
| ACTTCCTAACATGCACTAAG+AGG | - | chr5.2:71396976-71396995 | None:intergenic | 40.0% | |
| ACTTTCAAAACATGCTGCGA+GGG | + | chr5.2:71400263-71400282 | MS.gene76102:CDS | 40.0% | |
| AGCAACACGATAGTTATCCT+CGG | - | chr5.2:71399296-71399315 | None:intergenic | 40.0% | |
| AGCACTCTCAGTTACTCTAA+CGG | - | chr5.2:71398221-71398240 | None:intergenic | 40.0% | |
| AGGACTGAAAAATCGGAGTT+TGG | + | chr5.2:71395868-71395887 | MS.gene76102:CDS | 40.0% | |
| ATACGTATCTGATTACGACG+AGG | + | chr5.2:71395848-71395867 | MS.gene76102:CDS | 40.0% | |
| ATCTGACCATCTCATATCCA+TGG | + | chr5.2:71399430-71399449 | MS.gene76102:intron | 40.0% | |
| ATGGATATGAGATGGTCAGA+TGG | - | chr5.2:71399431-71399450 | None:intergenic | 40.0% | |
| ATTCTATCAGGTGATGCAGA+AGG | + | chr5.2:71396428-71396447 | MS.gene76102:intron | 40.0% | |
| ATTTCCAAACCCACACTAAG+AGG | - | chr5.2:71397167-71397186 | None:intergenic | 40.0% | |
| CAAAAAGGACTTCAGTGCAT+TGG | - | chr5.2:71400148-71400167 | None:intergenic | 40.0% | |
| CAAGACATGGGTGAAACAAT+GGG | + | chr5.2:71397682-71397701 | MS.gene76102:CDS | 40.0% | |
| CACCCTGGTATAAATTTGAC+TGG | + | chr5.2:71398679-71398698 | MS.gene76102:intron | 40.0% | |
| CAGTTCCACGTGACAAAAAA+TGG | - | chr5.2:71397550-71397569 | None:intergenic | 40.0% | |
| CATCCAGCTGATGAATCAAA+TGG | + | chr5.2:71399842-71399861 | MS.gene76102:intron | 40.0% | |
| CATTTGATTCATCAGCTGGA+TGG | - | chr5.2:71399844-71399863 | None:intergenic | 40.0% | |
| CTAGAAAACTCGAATCAAGC+CGG | + | chr5.2:71395721-71395740 | MS.gene76102:CDS | 40.0% | |
| CTAGACGAAAGAGAAAAGGT+TGG | - | chr5.2:71397409-71397428 | None:intergenic | 40.0% | |
| CTGTCAACAATGCACTTGAT+CGG | - | chr5.2:71398075-71398094 | None:intergenic | 40.0% | |
| CTTCAGGCTGTTATGTTACT+TGG | + | chr5.2:71400326-71400345 | MS.gene76102:intron | 40.0% | |
| CTTGTCTCCACCAAATATTC+TGG | - | chr5.2:71398164-71398183 | None:intergenic | 40.0% | |
| GATAAACTCCACGAATACCT+TGG | + | chr5.2:71398016-71398035 | MS.gene76102:CDS | 40.0% | |
| GCTTCATCCAGAATATTTGG+TGG | + | chr5.2:71398154-71398173 | MS.gene76102:CDS | 40.0% | |
| GGATCGAGGAATGAATTGAA+CGG | - | chr5.2:71395643-71395662 | None:intergenic | 40.0% | |
| GGGAATGTTAGATGCATCTA+TGG | - | chr5.2:71399674-71399693 | None:intergenic | 40.0% | |
| GTATGATAACTACTTCCACC+AGG | - | chr5.2:71395832-71395851 | None:intergenic | 40.0% | |
| GTCAAGTTTCAGCAAGACAT+GGG | + | chr5.2:71397670-71397689 | MS.gene76102:CDS | 40.0% | |
| GTCTTGCTGAAACTTGACAA+GGG | - | chr5.2:71397668-71397687 | None:intergenic | 40.0% | |
| TACGACGAGGACTGAAAAAT+CGG | + | chr5.2:71395861-71395880 | MS.gene76102:CDS | 40.0% | |
| TCAAGTCTATAGGAGTCTAC+TGG | - | chr5.2:71399550-71399569 | None:intergenic | 40.0% | |
| TCAAGTTAACTCAGAATCGC+AGG | + | chr5.2:71399463-71399482 | MS.gene76102:intron | 40.0% | |
| TCCACTCACTATCTCATGTA+TGG | - | chr5.2:71399363-71399382 | None:intergenic | 40.0% | |
| TCTGTTAGTAATGATTGGGG+AGG | + | chr5.2:71396735-71396754 | MS.gene76102:CDS | 40.0% | |
| TGACTCCATTTCATCGTCTT+GGG | - | chr5.2:71395539-71395558 | None:intergenic | 40.0% | |
| TGTCAAGTTTCAGCAAGACA+TGG | + | chr5.2:71397669-71397688 | MS.gene76102:CDS | 40.0% | |
| TGTCTTGCTGAAACTTGACA+AGG | - | chr5.2:71397669-71397688 | None:intergenic | 40.0% | |
| TGTTCCATTGAGAGCTTCAT+TGG | + | chr5.2:71399044-71399063 | MS.gene76102:intron | 40.0% | |
| TTCACTTCATTCGACACCAA+CGG | + | chr5.2:71395685-71395704 | MS.gene76102:CDS | 40.0% | |
| ! | AAAGTGGAAGGGATTTGCTT+AGG | + | chr5.2:71396691-71396710 | MS.gene76102:CDS | 40.0% |
| ! | AACGGTGATTTAGGACTTTG+CGG | - | chr5.2:71395625-71395644 | None:intergenic | 40.0% |
| ! | AACTTGAGATTTTGCAGCCA+TGG | - | chr5.2:71399450-71399469 | None:intergenic | 40.0% |
| ! | AAGGGGAAGCACAAATTTAC+AGG | - | chr5.2:71398354-71398373 | None:intergenic | 40.0% |
| ! | CATCTGCATTTACTTGTTGC+AGG | + | chr5.2:71397636-71397655 | MS.gene76102:intron | 40.0% |
| ! | CTCTACATCACGTGTTTTAC+AGG | + | chr5.2:71400381-71400400 | MS.gene76102:intron | 40.0% |
| ! | CTTCATTTTGTTGGGAGCTA+TGG | - | chr5.2:71399749-71399768 | None:intergenic | 40.0% |
| ! | GGAGAAGAAGGATAAGTTGA+TGG | + | chr5.2:71396797-71396816 | MS.gene76102:CDS | 40.0% |
| ! | GTGTTTGGTTCCATTTCTAG+AGG | - | chr5.2:71396257-71396276 | None:intergenic | 40.0% |
| ! | GTTTGGTTCCATTTCTAGAG+GGG | - | chr5.2:71396255-71396274 | None:intergenic | 40.0% |
| ! | TATTTGGTGGAGACAAGTCT+AGG | + | chr5.2:71398167-71398186 | MS.gene76102:CDS | 40.0% |
| ! | TTAGTGTCATTCAAACACCC+TGG | + | chr5.2:71398664-71398683 | MS.gene76102:intron | 40.0% |
| ! | TTGCCATTTGATTCATCAGC+TGG | - | chr5.2:71399848-71399867 | None:intergenic | 40.0% |
| !! | AATTTTGGCCCCTCTAGAAA+TGG | + | chr5.2:71396244-71396263 | MS.gene76102:intron | 40.0% |
| !! | AGAGTGTTTTTGCAGGTTCA+AGG | + | chr5.2:71396540-71396559 | MS.gene76102:CDS | 40.0% |
| !! | GAGTGTTTTTGCAGGTTCAA+GGG | + | chr5.2:71396541-71396560 | MS.gene76102:CDS | 40.0% |
| !! | GGCACTGATACTTATCCATA+AGG | - | chr5.2:71398619-71398638 | None:intergenic | 40.0% |
| !! | GGCTTGATTCGAGTTTTCTA+GGG | - | chr5.2:71395722-71395741 | None:intergenic | 40.0% |
| !! | GTCAGCAAAAGCATTGTTGA+TGG | - | chr5.2:71398053-71398072 | None:intergenic | 40.0% |
| AAAGACAACTACACCACCCT+AGG | - | chr5.2:71400048-71400067 | None:intergenic | 45.0% | |
| AAAGGCCAAAGGGTGAAATG+TGG | - | chr5.2:71399889-71399908 | None:intergenic | 45.0% | |
| AAGCACGGAAGAGAGAAAAG+TGG | - | chr5.2:71396390-71396409 | None:intergenic | 45.0% | |
| ACATGCACTAAGAGGACACA+AGG | - | chr5.2:71396968-71396987 | None:intergenic | 45.0% | |
| ACGTCCAATGAAGCTCTCAA+TGG | - | chr5.2:71399051-71399070 | None:intergenic | 45.0% | |
| ATAGAATGCGAGTTTGGGGA+CGG | + | chr5.2:71399570-71399589 | MS.gene76102:intron | 45.0% | |
| ATCCACCACATTTCACCCTT+TGG | + | chr5.2:71399881-71399900 | MS.gene76102:intron | 45.0% | |
| ATTGCTTCAGCGTAAGAAGG+AGG | - | chr5.2:71395664-71395683 | None:intergenic | 45.0% | |
| CATAACCATGGTTGCAAGTC+TGG | + | chr5.2:71399792-71399811 | MS.gene76102:intron | 45.0% | |
| CATCAGCTGGATGGTCTATT+GGG | - | chr5.2:71399835-71399854 | None:intergenic | 45.0% | |
| CATGCACTAAGAGGACACAA+GGG | - | chr5.2:71396967-71396986 | None:intergenic | 45.0% | |
| GAAAAGTTCGGTAGAGAGGA+AGG | + | chr5.2:71395978-71395997 | MS.gene76102:CDS | 45.0% | |
| GACTGCAATGTGACCATACT+TGG | + | chr5.2:71397291-71397310 | MS.gene76102:intron | 45.0% | |
| GACTTTCAAAACATGCTGCG+AGG | + | chr5.2:71400262-71400281 | MS.gene76102:CDS | 45.0% | |
| GCAAGACATGGGTGAAACAA+TGG | + | chr5.2:71397681-71397700 | MS.gene76102:CDS | 45.0% | |
| GGTAGAGAGGAAGGTAATGT+TGG | + | chr5.2:71395987-71396006 | MS.gene76102:intron | 45.0% | |
| GTGAAACAATGGGTGAGCTA+GGG | + | chr5.2:71397692-71397711 | MS.gene76102:CDS | 45.0% | |
| GTGACTCCATTTCATCGTCT+TGG | - | chr5.2:71395540-71395559 | None:intergenic | 45.0% | |
| GTGTCCTCTTAGTGCATGTT+AGG | + | chr5.2:71396969-71396988 | MS.gene76102:intron | 45.0% | |
| TAGGGTTGCATCCTGTGATT+GGG | + | chr5.2:71396502-71396521 | MS.gene76102:CDS | 45.0% | |
| TCATCAGCTGGATGGTCTAT+TGG | - | chr5.2:71399836-71399855 | None:intergenic | 45.0% | |
| TCGCAGGAGTTTATCACTCT+AGG | + | chr5.2:71399479-71399498 | MS.gene76102:intron | 45.0% | |
| TCTTTCCAGACTTGCAACCA+TGG | - | chr5.2:71399800-71399819 | None:intergenic | 45.0% | |
| TTAGGGTTGCATCCTGTGAT+TGG | + | chr5.2:71396501-71396520 | MS.gene76102:CDS | 45.0% | |
| TTCGGTTTCTGATCCTCAAG+AGG | + | chr5.2:71395780-71395799 | MS.gene76102:CDS | 45.0% | |
| TTGCAGCCATGGATATGAGA+TGG | - | chr5.2:71399439-71399458 | None:intergenic | 45.0% | |
| TTGGTGTAAGGAGGAGGTTT+CGG | + | chr5.2:71395887-71395906 | MS.gene76102:CDS | 45.0% | |
| TTTGAATGATGTGGCTCAGC+CGG | + | chr5.2:71396665-71396684 | MS.gene76102:CDS | 45.0% | |
| ! | ACATCACGTGTTTTACAGGC+AGG | + | chr5.2:71400385-71400404 | MS.gene76102:intron | 45.0% |
| ! | CTCTCTACCGAACTTTTCTC+CGG | - | chr5.2:71395976-71395995 | None:intergenic | 45.0% |
| ! | GATAGTGAGTGGAGTATCCA+AGG | + | chr5.2:71399370-71399389 | MS.gene76102:intron | 45.0% |
| !! | AAATCCCTTCCACTTTTCGC+CGG | - | chr5.2:71396687-71396706 | None:intergenic | 45.0% |
| !! | AAGGGTGAAATGTGGTGGAT+TGG | - | chr5.2:71399881-71399900 | None:intergenic | 45.0% |
| !! | AATCGGAGTTTGGTGTAAGG+AGG | + | chr5.2:71395878-71395897 | MS.gene76102:CDS | 45.0% |
| !! | AGGGTGAAATGTGGTGGATT+GGG | - | chr5.2:71399880-71399899 | None:intergenic | 45.0% |
| !! | CGGCTTGATTCGAGTTTTCT+AGG | - | chr5.2:71395723-71395742 | None:intergenic | 45.0% |
| !! | TAGCGTTGGAGAAGTATCTG+AGG | + | chr5.2:71396475-71396494 | MS.gene76102:CDS | 45.0% |
| !!! | GGAGTTGAGAGTGTTTTTGC+AGG | + | chr5.2:71396533-71396552 | MS.gene76102:CDS | 45.0% |
| AACAATGGGTGAGCTAGGGT+TGG | + | chr5.2:71397696-71397715 | MS.gene76102:CDS | 50.0% | |
| AACTCGAATCAAGCCGGATC+CGG | + | chr5.2:71395727-71395746 | MS.gene76102:CDS | 50.0% | |
| AAGCGCGAAGAACGTGATCT+TGG | - | chr5.2:71395516-71395535 | None:intergenic | 50.0% | |
| AAGGGAAGTTGCCGTTGATG+AGG | + | chr5.2:71396559-71396578 | MS.gene76102:CDS | 50.0% | |
| ACATCCGTCGTCCTCATCAA+CGG | - | chr5.2:71396573-71396592 | None:intergenic | 50.0% | |
| ACCCACACTAAGAGGACACA+AGG | - | chr5.2:71397159-71397178 | None:intergenic | 50.0% | |
| AGAGAAGATGGCTGCTGTGT+GGG | + | chr5.2:71400414-71400433 | MS.gene76102:CDS | 50.0% | |
| CCCACACTAAGAGGACACAA+GGG | - | chr5.2:71397158-71397177 | None:intergenic | 50.0% | |
| CCCTTGTGTCCTCTTAGTGT+GGG | + | chr5.2:71397155-71397174 | MS.gene76102:intron | 50.0% | |
| CGCTTCCCAAGACGATGAAA+TGG | + | chr5.2:71395531-71395550 | MS.gene76102:CDS | 50.0% | |
| CGGAGAAAAGTTCGGTAGAG+AGG | + | chr5.2:71395974-71395993 | MS.gene76102:CDS | 50.0% | |
| CGGTTATCGGAGGTTTATCG+TGG | + | chr5.2:71395931-71395950 | MS.gene76102:CDS | 50.0% | |
| CTATCAGGTGATGCAGAAGG+AGG | + | chr5.2:71396431-71396450 | MS.gene76102:intron | 50.0% | |
| CTTGCACCATCAACCCTGAT+TGG | - | chr5.2:71399216-71399235 | None:intergenic | 50.0% | |
| GATGCAGAAGGAGGAGTTTG+TGG | + | chr5.2:71396440-71396459 | MS.gene76102:CDS | 50.0% | |
| GGTGAAACAATGGGTGAGCT+AGG | + | chr5.2:71397691-71397710 | MS.gene76102:CDS | 50.0% | |
| GTAACGAACTCGCTTGTTCC+TGG | + | chr5.2:71395811-71395830 | MS.gene76102:CDS | 50.0% | |
| GTATGGTCACATTGCAGTCG+CGG | - | chr5.2:71397290-71397309 | None:intergenic | 50.0% | |
| GTGGTTATGTGATTCCGGTG+AGG | + | chr5.2:71395950-71395969 | MS.gene76102:CDS | 50.0% | |
| GTGTCCTCTTAGTGTGGGTT+TGG | + | chr5.2:71397160-71397179 | MS.gene76102:intron | 50.0% | |
| GTTACCTCTTGCTCCTCTTG+AGG | - | chr5.2:71395796-71395815 | None:intergenic | 50.0% | |
| TACGTTGTCGGAGCGGTTAT+CGG | + | chr5.2:71395918-71395937 | MS.gene76102:CDS | 50.0% | |
| TAGGGTTTGATCGTGACCGT+TGG | - | chr5.2:71395704-71395723 | None:intergenic | 50.0% | |
| TCCTCACTCTTCCCAATCAC+AGG | - | chr5.2:71396516-71396535 | None:intergenic | 50.0% | |
| TCCTGTGATTGGGAAGAGTG+AGG | + | chr5.2:71396512-71396531 | MS.gene76102:CDS | 50.0% | |
| TGATCCTCAAGAGGAGCAAG+AGG | + | chr5.2:71395789-71395808 | MS.gene76102:CDS | 50.0% | |
| TGATGGCTAGCATTGTCCCA+AGG | - | chr5.2:71398036-71398055 | None:intergenic | 50.0% | |
| TGCTGTGTGGGAAAAGCTTG+CGG | + | chr5.2:71400426-71400445 | MS.gene76102:CDS | 50.0% | |
| TGGCGTCAAGGATGCTTGAT+GGG | + | chr5.2:71396592-71396611 | MS.gene76102:CDS | 50.0% | |
| TGGTGTAAGGAGGAGGTTTC+GGG | + | chr5.2:71395888-71395907 | MS.gene76102:CDS | 50.0% | |
| TTATGTGATTCCGGTGAGGC+CGG | + | chr5.2:71395954-71395973 | MS.gene76102:CDS | 50.0% | |
| ! | GCATTGTCCCAAGGTATTCG+TGG | - | chr5.2:71398027-71398046 | None:intergenic | 50.0% |
| ! | GGTGATTTAGGACTTTGCGG+CGG | - | chr5.2:71395622-71395641 | None:intergenic | 50.0% |
| !! | GCGAGGGTTTGTTGTCAATC+AGG | + | chr5.2:71400279-71400298 | MS.gene76102:CDS | 50.0% |
| !! | TGTGATGCTAGGTTGGCCTA+GGG | + | chr5.2:71400029-71400048 | MS.gene76102:intron | 50.0% |
| !! | TTGTGATGCTAGGTTGGCCT+AGG | + | chr5.2:71400028-71400047 | MS.gene76102:intron | 50.0% |
| AACGGCGGCGATAATTCCTC+CGG | + | chr5.2:71395583-71395602 | MS.gene76102:CDS | 55.0% | |
| AATCAAGCCGGATCCGGATC+GGG | + | chr5.2:71395733-71395752 | MS.gene76102:CDS | 55.0% | |
| ACGAACTCGCTTGTTCCTGG+TGG | + | chr5.2:71395814-71395833 | MS.gene76102:CDS | 55.0% | |
| AGGAGGAGTTTGTGGAGCAG+AGG | + | chr5.2:71396448-71396467 | MS.gene76102:CDS | 55.0% | |
| AGGTGGTTACGTTGTCGGAG+CGG | + | chr5.2:71395911-71395930 | MS.gene76102:CDS | 55.0% | |
| ATCGGATTCCGTTCCCGATC+CGG | - | chr5.2:71395749-71395768 | None:intergenic | 55.0% | |
| CAGAGAAGATGGCTGCTGTG+TGG | + | chr5.2:71400413-71400432 | MS.gene76102:CDS | 55.0% | |
| CAGCGTAAGAAGGAGGATCG+AGG | - | chr5.2:71395657-71395676 | None:intergenic | 55.0% | |
| CTGCAGCTGTCAAAGCAAGC+AGG | + | chr5.2:71397806-71397825 | MS.gene76102:CDS | 55.0% | |
| GAATCAAGCCGGATCCGGAT+CGG | + | chr5.2:71395732-71395751 | MS.gene76102:CDS | 55.0% | |
| GCCCTTGTGTCCTCTTAGTG+TGG | + | chr5.2:71396963-71396982 | MS.gene76102:intron | 55.0% | |
| GGAATTATCGCCGCCGTTGT+CGG | - | chr5.2:71395581-71395600 | None:intergenic | 55.0% | |
| GGAGCAGAGGAGATTAGCGT+TGG | + | chr5.2:71396461-71396480 | MS.gene76102:CDS | 55.0% | |
| GGCAGGCTATGCAGAGAAGA+TGG | + | chr5.2:71400402-71400421 | MS.gene76102:intron | 55.0% | |
| GGCCAAAGGGTGAAATGTGG+TGG | - | chr5.2:71399886-71399905 | None:intergenic | 55.0% | |
| GGCGTCAAGGATGCTTGATG+GGG | + | chr5.2:71396593-71396612 | MS.gene76102:CDS | 55.0% | |
| GGTGAGGCCGGAGAAAAGTT+CGG | + | chr5.2:71395966-71395985 | MS.gene76102:CDS | 55.0% | |
| GTCAAGGATGCTTGATGGGG+CGG | + | chr5.2:71396596-71396615 | MS.gene76102:CDS | 55.0% | |
| GTGGCGTCAAGGATGCTTGA+TGG | + | chr5.2:71396591-71396610 | MS.gene76102:CDS | 55.0% | |
| TCAGCCGGCGAAAAGTGGAA+GGG | + | chr5.2:71396680-71396699 | MS.gene76102:CDS | 55.0% | |
| TCGGGAGGTGGTTACGTTGT+CGG | + | chr5.2:71395906-71395925 | MS.gene76102:CDS | 55.0% | |
| TGTAAGGAGGAGGTTTCGGG+AGG | + | chr5.2:71395891-71395910 | MS.gene76102:CDS | 55.0% | |
| ! | GAACTTTTCTCCGGCCTCAC+CGG | - | chr5.2:71395967-71395986 | None:intergenic | 55.0% |
| ! | GTTGATGAGGACGACGGATG+TGG | + | chr5.2:71396572-71396591 | MS.gene76102:CDS | 55.0% |
| ! | GTTGCCGTTGATGAGGACGA+CGG | + | chr5.2:71396566-71396585 | MS.gene76102:CDS | 55.0% |
| !! | CGGAGTTTGGTGTAAGGAGG+AGG | + | chr5.2:71395881-71395900 | MS.gene76102:CDS | 55.0% |
| !! | TTGGGGAGGTGCTAAGCCAT+TGG | + | chr5.2:71396749-71396768 | MS.gene76102:CDS | 55.0% |
| AAGGAGGAGGTTTCGGGAGG+TGG | + | chr5.2:71395894-71395913 | MS.gene76102:CDS | 60.0% | |
| CGGCGGTTGTTGAACGTTGC+CGG | - | chr5.2:71395605-71395624 | None:intergenic | 60.0% | |
| CGGTTGTTGAACGTTGCCGG+AGG | - | chr5.2:71395602-71395621 | None:intergenic | 60.0% | |
| CTCAGCCGGCGAAAAGTGGA+AGG | + | chr5.2:71396679-71396698 | MS.gene76102:CDS | 60.0% | |
| GTTGTCGGAGCGGTTATCGG+AGG | + | chr5.2:71395921-71395940 | MS.gene76102:CDS | 60.0% | |
| TTCCGTTCCCGATCCGGATC+CGG | - | chr5.2:71395743-71395762 | None:intergenic | 60.0% | |
| ! | AGCTGTTTGGGGCGGAGAGT+GGG | + | chr5.2:71396634-71396653 | MS.gene76102:CDS | 60.0% |
| !! | GATGCTAGGTTGGCCTAGGG+TGG | + | chr5.2:71400032-71400051 | MS.gene76102:intron | 60.0% |
| AGCCGGATCCGGATCGGGAA+CGG | + | chr5.2:71395738-71395757 | MS.gene76102:CDS | 65.0% | |
| AGGCTGCCACGGCAGCTGTT+TGG | + | chr5.2:71396621-71396640 | MS.gene76102:CDS | 65.0% | |
| CTCCACGACGACGCCGACAA+CGG | + | chr5.2:71395565-71395584 | MS.gene76102:CDS | 65.0% | |
| GCTGCCACGGCAGCTGTTTG+GGG | + | chr5.2:71396623-71396642 | MS.gene76102:CDS | 65.0% | |
| GGACGACGGATGTGGCGTCA+AGG | + | chr5.2:71396580-71396599 | MS.gene76102:CDS | 65.0% | |
| GGATGCTTGATGGGGCGGTG+AGG | + | chr5.2:71396601-71396620 | MS.gene76102:CDS | 65.0% | |
| GGCTGCCACGGCAGCTGTTT+GGG | + | chr5.2:71396622-71396641 | MS.gene76102:CDS | 65.0% | |
| GTGGCTCAGCCGGCGAAAAG+TGG | + | chr5.2:71396675-71396694 | MS.gene76102:CDS | 65.0% | |
| ! | CAGCTGTTTGGGGCGGAGAG+TGG | + | chr5.2:71396633-71396652 | MS.gene76102:CDS | 65.0% |
| ! | GCTGTTTGGGGCGGAGAGTG+GGG | + | chr5.2:71396635-71396654 | MS.gene76102:CDS | 65.0% |
| ATGGGGCGGTGAGGCTGCCA+CGG | + | chr5.2:71396610-71396629 | MS.gene76102:CDS | 70.0% | |
| CACGACGACGCCGACAACGG+CGG | + | chr5.2:71395568-71395587 | MS.gene76102:CDS | 70.0% | |
| CGTTGTCGGCGTCGTCGTGG+AGG | - | chr5.2:71395567-71395586 | None:intergenic | 70.0% | |
| GCCACGGCAGCTGTTTGGGG+CGG | + | chr5.2:71396626-71396645 | MS.gene76102:CDS | 70.0% | |
| TCCGCCCCAAACAGCTGCCG+TGG | - | chr5.2:71396630-71396649 | None:intergenic | 70.0% | |
| CGCCGTTGTCGGCGTCGTCG+TGG | - | chr5.2:71395570-71395589 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 71395505 | 71400483 | 71395505 | ID=MS.gene76102 |
| chr5.2 | mRNA | 71395505 | 71400483 | 71395505 | ID=MS.gene76102.t1;Parent=MS.gene76102 |
| chr5.2 | exon | 71395505 | 71395999 | 71395505 | ID=MS.gene76102.t1.exon1;Parent=MS.gene76102.t1 |
| chr5.2 | CDS | 71395505 | 71395999 | 71395505 | ID=cds.MS.gene76102.t1;Parent=MS.gene76102.t1 |
| chr5.2 | exon | 71396438 | 71396854 | 71396438 | ID=MS.gene76102.t1.exon2;Parent=MS.gene76102.t1 |
| chr5.2 | CDS | 71396438 | 71396854 | 71396438 | ID=cds.MS.gene76102.t1;Parent=MS.gene76102.t1 |
| chr5.2 | exon | 71397658 | 71397867 | 71397658 | ID=MS.gene76102.t1.exon3;Parent=MS.gene76102.t1 |
| chr5.2 | CDS | 71397658 | 71397867 | 71397658 | ID=cds.MS.gene76102.t1;Parent=MS.gene76102.t1 |
| chr5.2 | exon | 71398016 | 71398276 | 71398016 | ID=MS.gene76102.t1.exon4;Parent=MS.gene76102.t1 |
| chr5.2 | CDS | 71398016 | 71398276 | 71398016 | ID=cds.MS.gene76102.t1;Parent=MS.gene76102.t1 |
| chr5.2 | exon | 71400214 | 71400300 | 71400214 | ID=MS.gene76102.t1.exon5;Parent=MS.gene76102.t1 |
| chr5.2 | CDS | 71400214 | 71400300 | 71400214 | ID=cds.MS.gene76102.t1;Parent=MS.gene76102.t1 |
| chr5.2 | exon | 71400403 | 71400483 | 71400403 | ID=MS.gene76102.t1.exon6;Parent=MS.gene76102.t1 |
| chr5.2 | CDS | 71400403 | 71400483 | 71400403 | ID=cds.MS.gene76102.t1;Parent=MS.gene76102.t1 |
| Gene Sequence |
| Protein sequence |
