Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76287.t1 | XP_013470197.2 | 97.2 | 757 | 21 | 0 | 1 | 757 | 1 | 757 | 0.00E+00 | 1411.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76287.t1 | F4I4B6 | 64.2 | 752 | 249 | 8 | 13 | 757 | 6 | 744 | 6.4e-254 | 878.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76287.t1 | A0A072W1S7 | 97.2 | 754 | 21 | 0 | 4 | 757 | 1 | 754 | 0.0e+00 | 1406.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene76287 | MS.gene059432 | PPI |
MS.gene76287 | MS.gene006890 | PPI |
MS.gene059433 | MS.gene76287 | PPI |
MS.gene067568 | MS.gene76287 | PPI |
MS.gene006891 | MS.gene76287 | PPI |
MS.gene56433 | MS.gene76287 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76287.t1 | MTR_1g111120 | 97.215 | 754 | 21 | 0 | 4 | 757 | 1 | 754 | 0.0 | 1516 |
MS.gene76287.t1 | MTR_6g045363 | 88.011 | 759 | 81 | 5 | 4 | 757 | 3 | 756 | 0.0 | 1330 |
MS.gene76287.t1 | MTR_4g005930 | 57.973 | 740 | 289 | 10 | 27 | 757 | 21 | 747 | 0.0 | 779 |
MS.gene76287.t1 | MTR_4g083940 | 35.165 | 728 | 428 | 17 | 46 | 751 | 18 | 723 | 2.92e-115 | 366 |
MS.gene76287.t1 | MTR_1g069620 | 25.000 | 740 | 509 | 14 | 12 | 738 | 21 | 727 | 7.08e-48 | 182 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76287.t1 | AT1G10385 | 64.427 | 759 | 236 | 11 | 13 | 757 | 6 | 744 | 0.0 | 927 |
MS.gene76287.t1 | AT5G49830 | 56.292 | 739 | 297 | 11 | 27 | 757 | 15 | 735 | 0.0 | 752 |
MS.gene76287.t1 | AT5G49830 | 54.156 | 770 | 296 | 12 | 27 | 757 | 15 | 766 | 0.0 | 737 |
MS.gene76287.t1 | AT5G49830 | 56.577 | 707 | 282 | 10 | 59 | 757 | 108 | 797 | 0.0 | 726 |
MS.gene76287.t1 | AT1G10180 | 33.148 | 718 | 427 | 16 | 46 | 742 | 18 | 703 | 1.81e-111 | 356 |
Find 151 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGAATGCTCAAATGTATT+TGG | 0.147129 | 1.1:+78479871 | MS.gene76287:CDS |
ATAATTTGTGCAGCTTTATT+TGG | 0.152391 | 1.1:+78481421 | MS.gene76287:intron |
ATGCAGCTTGGTTAGATAAA+AGG | 0.224927 | 1.1:-78477799 | None:intergenic |
TCTCAGCCAATAGGACATTA+AGG | 0.231322 | 1.1:-78477958 | None:intergenic |
CTTTAGCTGCTGCTGATGAT+TGG | 0.267098 | 1.1:+78478653 | MS.gene76287:CDS |
CATGTCTGAATCTTCGTTTC+CGG | 0.274051 | 1.1:-78477867 | None:intergenic |
CTCGTTCATGCTGCGAGATT+TGG | 0.277623 | 1.1:-78476561 | None:intergenic |
ATCTCCGTTCCCCGAGTTGA+TGG | 0.281148 | 1.1:-78478145 | None:intergenic |
TTTCTGATGACCAAGACTTT+TGG | 0.282378 | 1.1:+78480918 | MS.gene76287:CDS |
ATAACTATAAAGATGATAAC+TGG | 0.300984 | 1.1:+78482101 | MS.gene76287:CDS |
AGTCTCGAGCCGACAACTTA+TGG | 0.301317 | 1.1:+78478268 | MS.gene76287:CDS |
TTCTTCAGTTCACGCTGTTC+CGG | 0.308671 | 1.1:-78479758 | None:intergenic |
ATCGATGCTGTTGCTGCTAC+AGG | 0.313596 | 1.1:+78481533 | MS.gene76287:CDS |
TCAAATCAATATGTCAATAA+TGG | 0.316896 | 1.1:+78476397 | None:intergenic |
CTCAAGATCTGAAATCTCTT+TGG | 0.319417 | 1.1:-78477753 | None:intergenic |
TGCTCACAAATTCAACTCTA+TGG | 0.352516 | 1.1:+78478777 | MS.gene76287:CDS |
TGCTCAAATGTATTTGGATA+TGG | 0.360208 | 1.1:+78479877 | MS.gene76287:CDS |
AACCAAGCTGCATTGGTTCA+TGG | 0.360509 | 1.1:+78477809 | MS.gene76287:CDS |
AAACTAGAATAAGAAGAAAC+AGG | 0.366793 | 1.1:-78478724 | None:intergenic |
TGAAACCCTTAATGTCCTAT+TGG | 0.368022 | 1.1:+78477952 | MS.gene76287:CDS |
CAAATTCAACTCTATGGTTC+AGG | 0.372321 | 1.1:+78478783 | MS.gene76287:CDS |
TGAATCCATGGTAGCTTTAG+AGG | 0.378246 | 1.1:+78477991 | MS.gene76287:CDS |
TAGTCACTGTCATCTCTTAG+AGG | 0.378681 | 1.1:+78478528 | MS.gene76287:CDS |
GCCAGTATTATTATTCCTAC+TGG | 0.384328 | 1.1:-78478695 | None:intergenic |
CTCAGCCAATAGGACATTAA+GGG | 0.386198 | 1.1:-78477957 | None:intergenic |
ATTGGAGAAGGAAACCATTC+AGG | 0.390426 | 1.1:-78479917 | None:intergenic |
CTTATCACTGAGAGTGAGAT+TGG | 0.393407 | 1.1:-78476489 | None:intergenic |
GACACTTGAAATCCTACAAT+TGG | 0.403457 | 1.1:+78479466 | MS.gene76287:CDS |
TGAAACAGGACAAACTCCTT+TGG | 0.404599 | 1.1:+78480949 | MS.gene76287:CDS |
GGGTCCTCTCGGCCTTCAAC+AGG | 0.405904 | 1.1:+78480970 | MS.gene76287:CDS |
CTTCTGCAGAAGCCTTCTTA+AGG | 0.407214 | 1.1:-78477085 | None:intergenic |
AGGCGAGAATCCGTTTCTTA+AGG | 0.409182 | 1.1:-78478450 | None:intergenic |
GAAACAGGACAAACTCCTTT+GGG | 0.418127 | 1.1:+78480950 | MS.gene76287:CDS |
TTGCAGAAGCAGTGATACTA+TGG | 0.423718 | 1.1:+78480894 | MS.gene76287:CDS |
CTTCTGTGAAGATCAGTTCC+AGG | 0.424513 | 1.1:-78479835 | None:intergenic |
ACCAGTAGGAATAATAATAC+TGG | 0.426137 | 1.1:+78478694 | MS.gene76287:CDS |
CAACGTTTGCCCAAAAGTCT+TGG | 0.435747 | 1.1:-78480928 | None:intergenic |
TATATATGTTTGTACCTGTT+GGG | 0.436231 | 1.1:-78481563 | None:intergenic |
ATTTGGATATGGAGGAGAAA+GGG | 0.437364 | 1.1:+78479888 | MS.gene76287:CDS |
GTTAGATAAAAGGTTTCTCA+TGG | 0.445154 | 1.1:-78477789 | None:intergenic |
GTATTATTATTCCTACTGGT+TGG | 0.448239 | 1.1:-78478691 | None:intergenic |
GAACTGATCTTCACAGAAGA+TGG | 0.453665 | 1.1:+78479839 | MS.gene76287:CDS |
AAACTTTCACATAGCACAAA+AGG | 0.453898 | 1.1:+78479695 | MS.gene76287:CDS |
GTTACCAATGCTTGATGAAA+GGG | 0.459681 | 1.1:-78476450 | None:intergenic |
GTGCAAGGCCATCCAATTGT+AGG | 0.460473 | 1.1:-78479478 | None:intergenic |
GCTCGAGACTTTGCATGTTA+CGG | 0.461531 | 1.1:-78478255 | None:intergenic |
TACATTTGAGCATTCAAAAG+TGG | 0.463005 | 1.1:-78479866 | None:intergenic |
TTGGATGGCCTTGCACTAGA+AGG | 0.464705 | 1.1:+78479485 | MS.gene76287:CDS |
TTTATCTAACCAAGCTGCAT+TGG | 0.464925 | 1.1:+78477802 | MS.gene76287:CDS |
TGAACTCATCTACCTGTTGA+AGG | 0.470405 | 1.1:-78480982 | None:intergenic |
GTAAAGCTTACCGGAGTGGC+AGG | 0.475314 | 1.1:+78480812 | MS.gene76287:CDS |
ATCTGATACTGCTTGTGAAA+TGG | 0.475631 | 1.1:-78478338 | None:intergenic |
CTAATTACTCTTCCTTCATA+CGG | 0.482371 | 1.1:+78477129 | MS.gene76287:CDS |
TTATCTTGTTGACCTTAAGA+AGG | 0.482425 | 1.1:+78477073 | MS.gene76287:CDS |
TTTCGCTTCTCCTTAAGAAA+CGG | 0.483756 | 1.1:+78478440 | MS.gene76287:CDS |
GATTGTTTCTGCTAGTTGAT+CGG | 0.484105 | 1.1:-78478116 | None:intergenic |
TTAAGTGCTTGCTCAACAAC+TGG | 0.484515 | 1.1:-78478595 | None:intergenic |
CTCGCCTCGATAGCTGCATC+AGG | 0.488135 | 1.1:+78478466 | MS.gene76287:CDS |
CTAAGAGATGACAGTGACTA+AGG | 0.496173 | 1.1:-78478525 | None:intergenic |
TCACTCTCAGTGATAAGCTC+CGG | 0.496299 | 1.1:+78476495 | MS.gene76287:CDS |
CAAAGAGATTTCAGATCTTG+AGG | 0.497575 | 1.1:+78477754 | MS.gene76287:CDS |
ATACTTCTGAGCTAGTAACT+TGG | 0.498432 | 1.1:+78478395 | MS.gene76287:CDS |
TTTGGATATGGAGGAGAAAG+GGG | 0.499912 | 1.1:+78479889 | MS.gene76287:CDS |
CTACAGGGCTAGATCCCAAC+AGG | 0.500114 | 1.1:+78481549 | MS.gene76287:CDS |
TTGGTTCATGGTTTAGCAGA+AGG | 0.500660 | 1.1:+78477821 | MS.gene76287:CDS |
TATTTGGATATGGAGGAGAA+AGG | 0.501650 | 1.1:+78479887 | MS.gene76287:CDS |
TTTGGAAGCAACATAGGCAC+TGG | 0.503568 | 1.1:-78476543 | None:intergenic |
TCAACAAACCACTCATCCTC+TGG | 0.505796 | 1.1:-78482068 | None:intergenic |
CCGTTCCCCGAGTTGATGGT+TGG | 0.508728 | 1.1:-78478141 | None:intergenic |
ACGAGATAAGTAACGACCTT+GGG | 0.509314 | 1.1:-78481471 | None:intergenic |
TCCTTCCTCTAAAGCTACCA+TGG | 0.511148 | 1.1:-78477996 | None:intergenic |
ACATTTGAGCATTCAAAAGT+GGG | 0.512082 | 1.1:-78479865 | None:intergenic |
CACTCTCAGTGATAAGCTCC+GGG | 0.515701 | 1.1:+78476496 | MS.gene76287:CDS |
AGGGTGTCAACTCGGTTCCT+TGG | 0.517258 | 1.1:+78477841 | MS.gene76287:CDS |
CATTGCATCAGATGTATTTG+TGG | 0.517401 | 1.1:+78480835 | MS.gene76287:CDS |
TGAGCACTGATTGAAAGCTT+AGG | 0.519082 | 1.1:-78478760 | None:intergenic |
CTAACTCCTCCATAAGTTGT+CGG | 0.519620 | 1.1:-78478277 | None:intergenic |
TTCTCAGTGACAGCTGAACC+TGG | 0.521769 | 1.1:-78479557 | None:intergenic |
GCGAGATTTGGAAGCAACAT+AGG | 0.526425 | 1.1:-78476549 | None:intergenic |
ATCAGATGTATTTGTGGGAA+GGG | 0.529411 | 1.1:+78480841 | MS.gene76287:CDS |
CTTGATGAAAGGGATCCTCT+TGG | 0.531833 | 1.1:-78476440 | None:intergenic |
ATGTATTTGTGGGAAGGGAA+AGG | 0.531950 | 1.1:+78480846 | MS.gene76287:CDS |
CAATCTGCCAACCATCAACT+CGG | 0.533197 | 1.1:+78478134 | MS.gene76287:CDS |
AAAGAGATTTCAGATCTTGA+GGG | 0.537696 | 1.1:+78477755 | MS.gene76287:CDS |
ATTGCATCAGATGTATTTGT+GGG | 0.540297 | 1.1:+78480836 | MS.gene76287:CDS |
CACTGATTGAAAGCTTAGGC+TGG | 0.540514 | 1.1:-78478756 | None:intergenic |
TTCAGTTCACGCTGTTCCGG+AGG | 0.543328 | 1.1:-78479755 | None:intergenic |
ATCAGATAAACAAAGACCTC+CGG | 0.544501 | 1.1:+78479739 | MS.gene76287:CDS |
TACTTCTGAGCTAGTAACTT+GGG | 0.545379 | 1.1:+78478396 | MS.gene76287:CDS |
GGATCCCTTTCATCAAGCAT+TGG | 0.546195 | 1.1:+78476446 | MS.gene76287:CDS |
TGGTTCATGGTTTAGCAGAA+GGG | 0.546446 | 1.1:+78477822 | MS.gene76287:CDS |
TTTCTGCAGACAGCATGCCC+TGG | 0.546742 | 1.1:+78479817 | MS.gene76287:CDS |
AACATAGGCACTGGGATCAA+AGG | 0.548125 | 1.1:-78476534 | None:intergenic |
GACGAGATAAGTAACGACCT+TGG | 0.550631 | 1.1:-78481472 | None:intergenic |
CATCAGATGTATTTGTGGGA+AGG | 0.550806 | 1.1:+78480840 | MS.gene76287:CDS |
CAACTCGGTTCCTTGGTGAC+CGG | 0.553889 | 1.1:+78477848 | MS.gene76287:CDS |
AGTTACCAATGCTTGATGAA+AGG | 0.554812 | 1.1:-78476451 | None:intergenic |
AACCATGAACCAATGCAGCT+TGG | 0.558664 | 1.1:-78477811 | None:intergenic |
TGACATAGAAATTAAACACT+TGG | 0.558914 | 1.1:-78479514 | None:intergenic |
CTTGAAATCCTACAATTGGA+TGG | 0.559055 | 1.1:+78479470 | MS.gene76287:CDS |
AATCTGCCAACCATCAACTC+GGG | 0.563979 | 1.1:+78478135 | MS.gene76287:CDS |
CAAACTCCTTTGGGTCCTCT+CGG | 0.564635 | 1.1:+78480959 | MS.gene76287:CDS |
TGTCATCTCTTAGAGGCTAG+TGG | 0.567934 | 1.1:+78478535 | MS.gene76287:CDS |
ACTAGCTCAGAAGTATATGC+AGG | 0.571093 | 1.1:-78478388 | None:intergenic |
ACTGAGAATCTAGAAAGCAC+AGG | 0.575033 | 1.1:+78479572 | MS.gene76287:CDS |
TTAAGTGCTTGAAATAAACT+CGG | 0.576111 | 1.1:-78478061 | None:intergenic |
GATCTGTACTCACCGTATGA+AGG | 0.576546 | 1.1:-78477141 | None:intergenic |
GAAAAGAGTGGATGAATCCA+TGG | 0.577713 | 1.1:+78477979 | MS.gene76287:CDS |
GTGTCTTGCCAGAGGATGAG+TGG | 0.578329 | 1.1:+78482060 | MS.gene76287:intron |
TCAGACGATCAACTTCGCGC+TGG | 0.582613 | 1.1:-78479787 | None:intergenic |
TTATGCTCGGGCTGATCAAG+TGG | 0.586669 | 1.1:-78482165 | None:intergenic |
GATCCTCTTGGAGTCGTGAA+AGG | 0.587148 | 1.1:-78476428 | None:intergenic |
CTGTTGATAAATGCAATGCC+AGG | 0.589521 | 1.1:+78479539 | MS.gene76287:CDS |
CCAACCATCAACTCGGGGAA+CGG | 0.591579 | 1.1:+78478141 | MS.gene76287:CDS |
ATCGTCCTCTACATTGTCAA+AGG | 0.593246 | 1.1:-78482132 | None:intergenic |
ACCTCCTGATGCAGCTATCG+AGG | 0.595434 | 1.1:-78478470 | None:intergenic |
TGATGCAATGCCTGCCACTC+CGG | 0.596969 | 1.1:-78480822 | None:intergenic |
TTCTGTGAAGATCAGTTCCA+GGG | 0.602696 | 1.1:-78479834 | None:intergenic |
TCGATGCTGTTGCTGCTACA+GGG | 0.603134 | 1.1:+78481534 | MS.gene76287:CDS |
TCCATGGTAGCTTTAGAGGA+AGG | 0.604289 | 1.1:+78477995 | MS.gene76287:CDS |
TCTCTTAGAGGCTAGTGGAA+TGG | 0.605218 | 1.1:+78478540 | MS.gene76287:CDS |
CTAAAATGTTTAAGTAACAC+AGG | 0.606071 | 1.1:-78478571 | None:intergenic |
CGGAAACGAAGATTCAGACA+TGG | 0.607458 | 1.1:+78477868 | MS.gene76287:CDS |
TCAAATGTATTTGGATATGG+AGG | 0.609186 | 1.1:+78479880 | MS.gene76287:CDS |
ATCTCGCAGCATGAACGAGA+AGG | 0.613434 | 1.1:+78476565 | MS.gene76287:CDS |
AGAAAGGGGAGATACCTGAA+TGG | 0.616037 | 1.1:+78479903 | MS.gene76287:CDS |
AACTAGAATAAGAAGAAACA+GGG | 0.616173 | 1.1:-78478723 | None:intergenic |
GGTGAAGTCCTTCTAGTGCA+AGG | 0.617281 | 1.1:-78479493 | None:intergenic |
TAACTATAAAGATGATAACT+GGG | 0.625636 | 1.1:+78482102 | MS.gene76287:CDS |
TCACCTTTCACGACTCCAAG+AGG | 0.627948 | 1.1:+78476425 | MS.gene76287:CDS |
GTCCTCTACATTGTCAAAGG+CGG | 0.628820 | 1.1:-78482129 | None:intergenic |
TTGCTTATGCACCAACCAGT+AGG | 0.635236 | 1.1:+78478680 | MS.gene76287:CDS |
AATAAGAAGAAACAGGGCGT+AGG | 0.640883 | 1.1:-78478717 | None:intergenic |
TTAGCAGAAGGGTGTCAACT+CGG | 0.642019 | 1.1:+78477833 | MS.gene76287:CDS |
GCCTCGATAGCTGCATCAGG+AGG | 0.642479 | 1.1:+78478469 | MS.gene76287:CDS |
ATCTTCGTTTCCGGTCACCA+AGG | 0.643279 | 1.1:-78477858 | None:intergenic |
GGGAACGGAGATTCGATCAA+CGG | 0.647088 | 1.1:+78478156 | MS.gene76287:CDS |
ATGGCTAAAGAAATTAAACA+AGG | 0.647355 | 1.1:+78478025 | MS.gene76287:CDS |
AGCCGCCTTTGACAATGTAG+AGG | 0.649326 | 1.1:+78482127 | MS.gene76287:CDS |
CTGAGAATCTAGAAAGCACA+GGG | 0.650643 | 1.1:+78479573 | MS.gene76287:CDS |
TATGCTCGGGCTGATCAAGT+GGG | 0.651352 | 1.1:-78482164 | None:intergenic |
CTCGAGCCGACAACTTATGG+AGG | 0.651664 | 1.1:+78478271 | MS.gene76287:CDS |
TTGGAAGCAACATAGGCACT+GGG | 0.653116 | 1.1:-78476542 | None:intergenic |
CCTATTGGCTGAGAAAAGAG+TGG | 0.653524 | 1.1:+78477967 | MS.gene76287:CDS |
TGGCTAAAGAAATTAAACAA+GGG | 0.659812 | 1.1:+78478026 | MS.gene76287:CDS |
ATCTGCCAACCATCAACTCG+GGG | 0.662351 | 1.1:+78478136 | MS.gene76287:CDS |
AGAAGTAGCGTATGAGCACG+AGG | 0.667862 | 1.1:-78478208 | None:intergenic |
TGAAGGCCGAGAGGACCCAA+AGG | 0.674552 | 1.1:-78480965 | None:intergenic |
TCTACCTGTTGAAGGCCGAG+AGG | 0.701377 | 1.1:-78480974 | None:intergenic |
GAATGACAGTGTCTTGCCAG+AGG | 0.707165 | 1.1:+78482052 | MS.gene76287:intron |
GAAAGTTTGATTACAGCACG+CGG | 0.737041 | 1.1:-78479680 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATCTATTATTATTATCA+TGG | - | chr1.1:78478909-78478928 | None:intergenic | 10.0% |
!! | ATATCTATTATTATTATCAT+GGG | - | chr1.1:78478908-78478927 | None:intergenic | 10.0% |
!!! | TATTACGTTTTATTTTATTT+TGG | - | chr1.1:78480446-78480465 | None:intergenic | 10.0% |
!!! | TTTCTGTTTATAATTTTAAT+TGG | - | chr1.1:78481898-78481917 | None:intergenic | 10.0% |
!!! | TTTGTATTTTATATAATTTG+TGG | + | chr1.1:78477578-78477597 | MS.gene76287:intron | 10.0% |
!! | AAAATTATGAATACGAAATT+TGG | + | chr1.1:78477520-78477539 | MS.gene76287:intron | 15.0% |
!! | ATATATCAAAAACAGAAAAA+TGG | + | chr1.1:78477915-78477934 | MS.gene76287:CDS | 15.0% |
!! | TATTAAAAACATTATTGGAA+GGG | + | chr1.1:78481508-78481527 | MS.gene76287:CDS | 15.0% |
!! | TCTAAAAAATTACTAAGATT+TGG | + | chr1.1:78480478-78480497 | MS.gene76287:intron | 15.0% |
!! | TTGATATAAAAGTGAAAAAT+AGG | + | chr1.1:78477477-78477496 | MS.gene76287:intron | 15.0% |
!!! | AAAAGTATTTGGATATATTT+TGG | + | chr1.1:78481237-78481256 | MS.gene76287:intron | 15.0% |
!!! | AAAATAGAGATTTTATACTT+AGG | - | chr1.1:78477615-78477634 | None:intergenic | 15.0% |
!!! | ATCTTTCTTTTTATACTATT+AGG | + | chr1.1:78479225-78479244 | MS.gene76287:intron | 15.0% |
!!! | GAAAAAATTGTAAAAGTATT+TGG | + | chr1.1:78481226-78481245 | MS.gene76287:intron | 15.0% |
!!! | TATTTTATATAATTTGTGGA+AGG | + | chr1.1:78477582-78477601 | MS.gene76287:intron | 15.0% |
!!! | TGAATATATGTTTTTTTGAA+TGG | + | chr1.1:78480563-78480582 | MS.gene76287:intron | 15.0% |
!! | AAATTATTTAATAGTGAGTC+TGG | - | chr1.1:78481408-78481427 | None:intergenic | 20.0% |
!! | AGAAAGCAATATAAAAACAA+TGG | + | chr1.1:78481864-78481883 | MS.gene76287:intron | 20.0% |
!! | AGGAATAGAATCATATATTA+GGG | + | chr1.1:78479245-78479264 | MS.gene76287:intron | 20.0% |
!! | AGTTGAATTTAGAAACTTAA+TGG | + | chr1.1:78481088-78481107 | MS.gene76287:intron | 20.0% |
!! | ATAACTATAAAGATGATAAC+TGG | + | chr1.1:78482101-78482120 | MS.gene76287:CDS | 20.0% |
!! | ATATATGATGCATAAGAATT+TGG | - | chr1.1:78477291-78477310 | None:intergenic | 20.0% |
!! | CAAGCTATTAAAAACATTAT+TGG | + | chr1.1:78481503-78481522 | MS.gene76287:CDS | 20.0% |
!! | CTATTAAAAACATTATTGGA+AGG | + | chr1.1:78481507-78481526 | MS.gene76287:CDS | 20.0% |
!! | TAACTATAAAGATGATAACT+GGG | + | chr1.1:78482102-78482121 | MS.gene76287:CDS | 20.0% |
!! | TAATCAAATGAAAGCAAAAA+AGG | - | chr1.1:78476987-78477006 | None:intergenic | 20.0% |
!! | TAGGAATAGAATCATATATT+AGG | + | chr1.1:78479244-78479263 | MS.gene76287:intron | 20.0% |
!! | TCAATATTTGCATTGTTTAT+AGG | + | chr1.1:78477031-78477050 | MS.gene76287:intron | 20.0% |
!! | TCTTAAATTATTATTGATGC+AGG | - | chr1.1:78480530-78480549 | None:intergenic | 20.0% |
!! | TTCCTATATTATTATTGTTC+AGG | + | chr1.1:78480781-78480800 | MS.gene76287:intron | 20.0% |
!!! | ATTGTTTTTATATTGCTTTC+TGG | - | chr1.1:78481865-78481884 | None:intergenic | 20.0% |
!!! | CTATTTTGTAAAATTATTGC+AGG | + | chr1.1:78479036-78479055 | MS.gene76287:intron | 20.0% |
!!! | TACTTTAATTCTCTAAAGTA+TGG | - | chr1.1:78476865-78476884 | None:intergenic | 20.0% |
!!! | TTAAGGATTTTATTCTTTGT+TGG | - | chr1.1:78479371-78479390 | None:intergenic | 20.0% |
!!! | TTGAGTTTTTGATAAATAAC+TGG | + | chr1.1:78481146-78481165 | MS.gene76287:intron | 20.0% |
!!! | TTTGTGATTTAAAGCAATTT+TGG | + | chr1.1:78481017-78481036 | MS.gene76287:intron | 20.0% |
! | AAAACAGAAAAATGGCTAAT+AGG | + | chr1.1:78477923-78477942 | MS.gene76287:CDS | 25.0% |
! | AAACTAGAATAAGAAGAAAC+AGG | - | chr1.1:78478727-78478746 | None:intergenic | 25.0% |
! | AAATTATTATTGATGCAGGA+GGG | - | chr1.1:78480526-78480545 | None:intergenic | 25.0% |
! | AACTAGAATAAGAAGAAACA+GGG | - | chr1.1:78478726-78478745 | None:intergenic | 25.0% |
! | AAGATATTCATCTAAGTGAA+AGG | + | chr1.1:78476815-78476834 | MS.gene76287:intron | 25.0% |
! | ATATTCACACAAGAAAGAAA+AGG | - | chr1.1:78479422-78479441 | None:intergenic | 25.0% |
! | ATGGCTAAAGAAATTAAACA+AGG | + | chr1.1:78478025-78478044 | MS.gene76287:CDS | 25.0% |
! | ATGTCACAACTTGATAAAAA+GGG | + | chr1.1:78476663-78476682 | MS.gene76287:intron | 25.0% |
! | CATTACATAAAAATGGAAAG+GGG | - | chr1.1:78479399-78479418 | None:intergenic | 25.0% |
! | CTAAAATGTTTAAGTAACAC+AGG | - | chr1.1:78478574-78478593 | None:intergenic | 25.0% |
! | CTCCTGAACAATAATAATAT+AGG | - | chr1.1:78480786-78480805 | None:intergenic | 25.0% |
! | GCAATGAAAAATTCACAAAA+CGG | - | chr1.1:78477332-78477351 | None:intergenic | 25.0% |
! | GCATTACATAAAAATGGAAA+GGG | - | chr1.1:78479400-78479419 | None:intergenic | 25.0% |
! | TAAAAACAACTTTATGCAAG+AGG | - | chr1.1:78477211-78477230 | None:intergenic | 25.0% |
! | TAAATTATTATTGATGCAGG+AGG | - | chr1.1:78480527-78480546 | None:intergenic | 25.0% |
! | TAGTGATAATAAGGATTGAT+CGG | - | chr1.1:78479119-78479138 | None:intergenic | 25.0% |
! | TATAGCTTAAAATAGCATTG+TGG | + | chr1.1:78481582-78481601 | MS.gene76287:intron | 25.0% |
! | TATATATGTTTGTACCTGTT+GGG | - | chr1.1:78481566-78481585 | None:intergenic | 25.0% |
! | TCAGATTAATTCAATGAGAT+AGG | + | chr1.1:78476701-78476720 | MS.gene76287:intron | 25.0% |
! | TCTTATGCATCATATATGAA+GGG | + | chr1.1:78477294-78477313 | MS.gene76287:intron | 25.0% |
! | TCTTTCTTGTGTGAATATAT+AGG | + | chr1.1:78479424-78479443 | MS.gene76287:intron | 25.0% |
! | TGACATAGAAATTAAACACT+TGG | - | chr1.1:78479517-78479536 | None:intergenic | 25.0% |
! | TGGCTAAAGAAATTAAACAA+GGG | + | chr1.1:78478026-78478045 | MS.gene76287:CDS | 25.0% |
! | TGTTTGTTTACCTGAAAAAT+TGG | - | chr1.1:78479938-78479957 | None:intergenic | 25.0% |
! | TTAAGTGCTTGAAATAAACT+CGG | - | chr1.1:78478064-78478083 | None:intergenic | 25.0% |
! | TTCAAACAATACAACATGTT+TGG | - | chr1.1:78481941-78481960 | None:intergenic | 25.0% |
! | TTCTTATGCATCATATATGA+AGG | + | chr1.1:78477293-78477312 | MS.gene76287:intron | 25.0% |
! | TTTGAATGCTCAAATGTATT+TGG | + | chr1.1:78479871-78479890 | MS.gene76287:CDS | 25.0% |
!! | TGTTAAAGAAAACTCTGAAA+AGG | - | chr1.1:78477380-78477399 | None:intergenic | 25.0% |
!! | TTTTGAATGGCAAATGATAT+TGG | + | chr1.1:78480576-78480595 | MS.gene76287:intron | 25.0% |
!! | TTTTGATAAATAACTGGACA+TGG | + | chr1.1:78481152-78481171 | MS.gene76287:intron | 25.0% |
!!! | AACACTGAGGTTTTAAATAA+AGG | - | chr1.1:78477690-78477709 | None:intergenic | 25.0% |
!!! | AAGCTTGAGTATTGAAAATA+AGG | + | chr1.1:78481051-78481070 | MS.gene76287:intron | 25.0% |
!!! | ATAATTTGTGCAGCTTTATT+TGG | + | chr1.1:78481421-78481440 | MS.gene76287:intron | 25.0% |
!!! | GAAAAGGCATTACATAAAAA+TGG | - | chr1.1:78479406-78479425 | None:intergenic | 25.0% |
!!! | TTATGTTAGTTTTCATAGTC+CGG | + | chr1.1:78477177-78477196 | MS.gene76287:intron | 25.0% |
!!! | TTTTATTTTATTTTGGCCCA+CGG | - | chr1.1:78480439-78480458 | None:intergenic | 25.0% |
!!! | TTTTTCAGGTAAACAAACAA+AGG | + | chr1.1:78479939-78479958 | MS.gene76287:intron | 25.0% |
AAAAATTCACAAAACGGCAA+TGG | - | chr1.1:78477326-78477345 | None:intergenic | 30.0% | |
AAACTTTCACATAGCACAAA+AGG | + | chr1.1:78479695-78479714 | MS.gene76287:CDS | 30.0% | |
AAAGAGATTTCAGATCTTGA+GGG | + | chr1.1:78477755-78477774 | MS.gene76287:CDS | 30.0% | |
AATCCTTATTATCACTAGGT+CGG | + | chr1.1:78479122-78479141 | MS.gene76287:intron | 30.0% | |
ACACTACTGATATGTCTATA+TGG | - | chr1.1:78480111-78480130 | None:intergenic | 30.0% | |
ACATTTGAGCATTCAAAAGT+GGG | - | chr1.1:78479868-78479887 | None:intergenic | 30.0% | |
ACCAGTAGGAATAATAATAC+TGG | + | chr1.1:78478694-78478713 | MS.gene76287:CDS | 30.0% | |
ACTACTATCACTATGCTTAT+AGG | - | chr1.1:78480044-78480063 | None:intergenic | 30.0% | |
AGAGAATCACAAATTCAACT+AGG | + | chr1.1:78479328-78479347 | MS.gene76287:intron | 30.0% | |
ATGTCTTCAATATGAAGTCT+CGG | + | chr1.1:78480731-78480750 | MS.gene76287:intron | 30.0% | |
ATTGCATCAGATGTATTTGT+GGG | + | chr1.1:78480836-78480855 | MS.gene76287:CDS | 30.0% | |
CACTTAGATGAATATCTTCT+AGG | - | chr1.1:78476813-78476832 | None:intergenic | 30.0% | |
CATGTCACAACTTGATAAAA+AGG | + | chr1.1:78476662-78476681 | MS.gene76287:intron | 30.0% | |
CTAATTACTCTTCCTTCATA+CGG | + | chr1.1:78477129-78477148 | MS.gene76287:CDS | 30.0% | |
CTATATATGTTTGTACCTGT+TGG | - | chr1.1:78481567-78481586 | None:intergenic | 30.0% | |
GACTTGAGACAATAATTGTT+CGG | + | chr1.1:78481699-78481718 | MS.gene76287:intron | 30.0% | |
GATCAATCCTTATTATCACT+AGG | + | chr1.1:78479118-78479137 | MS.gene76287:intron | 30.0% | |
GATTCAGAAATATCAGTTTC+TGG | + | chr1.1:78477453-78477472 | MS.gene76287:intron | 30.0% | |
GGCATTACATAAAAATGGAA+AGG | - | chr1.1:78479401-78479420 | None:intergenic | 30.0% | |
GTATTATTATTCCTACTGGT+TGG | - | chr1.1:78478694-78478713 | None:intergenic | 30.0% | |
GTGAAATGGTTGAAAAAACA+AGG | - | chr1.1:78478327-78478346 | None:intergenic | 30.0% | |
GTTAGATAAAAGGTTTCTCA+TGG | - | chr1.1:78477792-78477811 | None:intergenic | 30.0% | |
TAATAGTTTACTCCTTCGTA+GGG | + | chr1.1:78480613-78480632 | MS.gene76287:intron | 30.0% | |
TACATTTGAGCATTCAAAAG+TGG | - | chr1.1:78479869-78479888 | None:intergenic | 30.0% | |
TCAAATGTATTTGGATATGG+AGG | + | chr1.1:78479880-78479899 | MS.gene76287:CDS | 30.0% | |
TGCATAAGAATTTGGAAATG+TGG | - | chr1.1:78477283-78477302 | None:intergenic | 30.0% | |
TGCTCAAATGTATTTGGATA+TGG | + | chr1.1:78479877-78479896 | MS.gene76287:CDS | 30.0% | |
TTAATAGTTTACTCCTTCGT+AGG | + | chr1.1:78480612-78480631 | MS.gene76287:intron | 30.0% | |
TTATCGAACAAACGTTAATC+AGG | + | chr1.1:78481793-78481812 | MS.gene76287:intron | 30.0% | |
TTATCTTGTTGACCTTAAGA+AGG | + | chr1.1:78477073-78477092 | MS.gene76287:CDS | 30.0% | |
TTTAATGTAACTGCATGTGT+TGG | - | chr1.1:78479010-78479029 | None:intergenic | 30.0% | |
TTTACCTGAAAAATTGGAGA+AGG | - | chr1.1:78479932-78479951 | None:intergenic | 30.0% | |
TTTAGAGGAAGGAGAAAAAA+TGG | + | chr1.1:78478006-78478025 | MS.gene76287:CDS | 30.0% | |
TTTGAATGTATTGCATGCAT+TGG | + | chr1.1:78480149-78480168 | MS.gene76287:intron | 30.0% | |
! | AAAGAAAACTCTGAAAAGGA+AGG | - | chr1.1:78477376-78477395 | None:intergenic | 30.0% |
! | CAACATCGTTCACATTTTTA+AGG | - | chr1.1:78476761-78476780 | None:intergenic | 30.0% |
! | TATTATTATCATGGGCTACT+TGG | - | chr1.1:78478900-78478919 | None:intergenic | 30.0% |
! | TTTGCTATGTTCTAACAACA+TGG | + | chr1.1:78480000-78480019 | MS.gene76287:intron | 30.0% |
! | TTTTTGTCTGTGTTCAGTAA+TGG | - | chr1.1:78478092-78478111 | None:intergenic | 30.0% |
!! | AAACTTGTTCTTTTCTACCT+AGG | - | chr1.1:78480279-78480298 | None:intergenic | 30.0% |
!! | AAGAATTCTGTTTCTGTTTG+AGG | - | chr1.1:78481304-78481323 | None:intergenic | 30.0% |
!! | ATCGTTCACATTTTTAAGGA+CGG | - | chr1.1:78476757-78476776 | None:intergenic | 30.0% |
!! | ATTGCATAGGGAAAAGTATT+TGG | - | chr1.1:78480655-78480674 | None:intergenic | 30.0% |
!! | CTTTTTATCAAGTTGTGACA+TGG | - | chr1.1:78476664-78476683 | None:intergenic | 30.0% |
!! | TGAACGATGTTGTGTTTTTA+AGG | + | chr1.1:78476769-78476788 | MS.gene76287:intron | 30.0% |
!!! | TTACTTTGGGACAAGTATTT+TGG | + | chr1.1:78477555-78477574 | MS.gene76287:intron | 30.0% |
!!! | TTTATTTTATTTTGGCCCAC+GGG | - | chr1.1:78480438-78480457 | None:intergenic | 30.0% |
AACTTGTGAAAATAGGGTTC+CGG | + | chr1.1:78480309-78480328 | MS.gene76287:intron | 35.0% | |
AAGGAGAAGCGAAAAAGTTT+CGG | - | chr1.1:78478434-78478453 | None:intergenic | 35.0% | |
AAGTGTAGAGCTATAACCAA+AGG | - | chr1.1:78479978-78479997 | None:intergenic | 35.0% | |
ACACATTGCATAAGAAGACA+TGG | - | chr1.1:78476938-78476957 | None:intergenic | 35.0% | |
AGCGACAAACTTGTGAAAAT+AGG | + | chr1.1:78480302-78480321 | MS.gene76287:intron | 35.0% | |
AGTTACCAATGCTTGATGAA+AGG | - | chr1.1:78476454-78476473 | None:intergenic | 35.0% | |
ATACTTCTGAGCTAGTAACT+TGG | + | chr1.1:78478395-78478414 | MS.gene76287:CDS | 35.0% | |
ATCAGATAAACAAAGACCTC+CGG | + | chr1.1:78479739-78479758 | MS.gene76287:CDS | 35.0% | |
ATCAGATGTATTTGTGGGAA+GGG | + | chr1.1:78480841-78480860 | MS.gene76287:CDS | 35.0% | |
ATCTGATACTGCTTGTGAAA+TGG | - | chr1.1:78478341-78478360 | None:intergenic | 35.0% | |
ATGAGATAGGTAAGATCACA+CGG | + | chr1.1:78476714-78476733 | MS.gene76287:intron | 35.0% | |
ATGCAGCTTGGTTAGATAAA+AGG | - | chr1.1:78477802-78477821 | None:intergenic | 35.0% | |
ATTTGGATATGGAGGAGAAA+GGG | + | chr1.1:78479888-78479907 | MS.gene76287:CDS | 35.0% | |
CAAAGAGATTTCAGATCTTG+AGG | + | chr1.1:78477754-78477773 | MS.gene76287:CDS | 35.0% | |
CAAATTCAACTCTATGGTTC+AGG | + | chr1.1:78478783-78478802 | MS.gene76287:CDS | 35.0% | |
CAACTTATGTGGATATATGG+AGG | - | chr1.1:78480678-78480697 | None:intergenic | 35.0% | |
CAATGTGTTGGACAATGTTA+TGG | + | chr1.1:78476950-78476969 | MS.gene76287:intron | 35.0% | |
CACATTGCATAAGAAGACAT+GGG | - | chr1.1:78476937-78476956 | None:intergenic | 35.0% | |
CACCAACTTATGTGGATATA+TGG | - | chr1.1:78480681-78480700 | None:intergenic | 35.0% | |
CATTGCATCAGATGTATTTG+TGG | + | chr1.1:78480835-78480854 | MS.gene76287:CDS | 35.0% | |
CTCCATATATCCACATAAGT+TGG | + | chr1.1:78480676-78480695 | MS.gene76287:intron | 35.0% | |
CTTGAAATCCTACAATTGGA+TGG | + | chr1.1:78479470-78479489 | MS.gene76287:CDS | 35.0% | |
GAAACTATGGCAAAAAAGTG+AGG | - | chr1.1:78478845-78478864 | None:intergenic | 35.0% | |
GAAAGAAATAACAAACCCGT+GGG | + | chr1.1:78480420-78480439 | MS.gene76287:intron | 35.0% | |
GAAGCAGTAGAAAACAAACA+TGG | - | chr1.1:78482010-78482029 | None:intergenic | 35.0% | |
GACACTTGAAATCCTACAAT+TGG | + | chr1.1:78479466-78479485 | MS.gene76287:CDS | 35.0% | |
GATATATGGAGGATTGCATA+GGG | - | chr1.1:78480667-78480686 | None:intergenic | 35.0% | |
GCCAGTATTATTATTCCTAC+TGG | - | chr1.1:78478698-78478717 | None:intergenic | 35.0% | |
GCGACAAACTTGTGAAAATA+GGG | + | chr1.1:78480303-78480322 | MS.gene76287:intron | 35.0% | |
GCTTAAAATAGCATTGTGGA+TGG | + | chr1.1:78481586-78481605 | MS.gene76287:intron | 35.0% | |
GTAGTATAACCTATGTGACA+TGG | + | chr1.1:78480059-78480078 | MS.gene76287:intron | 35.0% | |
GTTACCAATGCTTGATGAAA+GGG | - | chr1.1:78476453-78476472 | None:intergenic | 35.0% | |
GTTTCAAATAGCAAACACTG+AGG | - | chr1.1:78477703-78477722 | None:intergenic | 35.0% | |
TAAAGTCATAAGGACAAGGA+GGG | + | chr1.1:78481824-78481843 | MS.gene76287:intron | 35.0% | |
TACTTCTGAGCTAGTAACTT+GGG | + | chr1.1:78478396-78478415 | MS.gene76287:CDS | 35.0% | |
TATGCTTATAGGAATGCATG+TGG | - | chr1.1:78480033-78480052 | None:intergenic | 35.0% | |
TATTTGGATATGGAGGAGAA+AGG | + | chr1.1:78479887-78479906 | MS.gene76287:CDS | 35.0% | |
TGAAACCCTTAATGTCCTAT+TGG | + | chr1.1:78477952-78477971 | MS.gene76287:CDS | 35.0% | |
TGAAAGAAATAACAAACCCG+TGG | + | chr1.1:78480419-78480438 | MS.gene76287:intron | 35.0% | |
TGCAAACAACTGTGAAACTA+TGG | - | chr1.1:78478858-78478877 | None:intergenic | 35.0% | |
TGCTCACAAATTCAACTCTA+TGG | + | chr1.1:78478777-78478796 | MS.gene76287:CDS | 35.0% | |
TGTCTTCTTATGCAATGTGT+TGG | + | chr1.1:78476938-78476957 | MS.gene76287:intron | 35.0% | |
TTTATCTAACCAAGCTGCAT+TGG | + | chr1.1:78477802-78477821 | MS.gene76287:CDS | 35.0% | |
TTTCGCTTCTCCTTAAGAAA+CGG | + | chr1.1:78478440-78478459 | MS.gene76287:CDS | 35.0% | |
! | AGATTTTCTCTCAATTCTGG+TGG | - | chr1.1:78480338-78480357 | None:intergenic | 35.0% |
! | ATTAGCGTTGAAAAATCTGG+GGG | + | chr1.1:78478180-78478199 | MS.gene76287:CDS | 35.0% |
! | ATTCAACTAGGTTGAAAGTG+AGG | + | chr1.1:78479340-78479359 | MS.gene76287:intron | 35.0% |
! | CATCTAAAGTCATAAGGACA+AGG | + | chr1.1:78481820-78481839 | MS.gene76287:intron | 35.0% |
! | CATTAGCGTTGAAAAATCTG+GGG | + | chr1.1:78478179-78478198 | MS.gene76287:CDS | 35.0% |
! | CTCAAGATCTGAAATCTCTT+TGG | - | chr1.1:78477756-78477775 | None:intergenic | 35.0% |
! | GAGCTTTTTGTAAAGCTTAC+CGG | + | chr1.1:78480803-78480822 | MS.gene76287:CDS | 35.0% |
! | GATTCTTTGACAGTTTTTGC+TGG | + | chr1.1:78478358-78478377 | MS.gene76287:CDS | 35.0% |
! | GCATTAGCGTTGAAAAATCT+GGG | + | chr1.1:78478178-78478197 | MS.gene76287:CDS | 35.0% |
! | GCTTTCATTCTGGTTACTTT+GGG | + | chr1.1:78477542-78477561 | MS.gene76287:intron | 35.0% |
! | GGTCATCATCTAAAGTCATA+AGG | + | chr1.1:78481814-78481833 | MS.gene76287:intron | 35.0% |
! | GTGATGATATTTTCATCCCA+AGG | + | chr1.1:78481455-78481474 | MS.gene76287:CDS | 35.0% |
! | GTTTCCTTCTCCAATTTTTC+AGG | + | chr1.1:78479925-78479944 | MS.gene76287:CDS | 35.0% |
! | TCGAGATTTTCTCTCAATTC+TGG | - | chr1.1:78480341-78480360 | None:intergenic | 35.0% |
! | TTCTGATGACCAAGACTTTT+GGG | + | chr1.1:78480919-78480938 | MS.gene76287:CDS | 35.0% |
! | TTTCTGATGACCAAGACTTT+TGG | + | chr1.1:78480918-78480937 | MS.gene76287:CDS | 35.0% |
!! | ACGAAATTTGGCTTTCATTC+TGG | + | chr1.1:78477532-78477551 | MS.gene76287:intron | 35.0% |
!! | AGGTAGAACTTTTGAAAACC+CGG | - | chr1.1:78476517-78476536 | None:intergenic | 35.0% |
!! | AGTGAGTCTGGAATTGTTTT+TGG | - | chr1.1:78481396-78481415 | None:intergenic | 35.0% |
!! | ATATCCACATAAGTTGGTGT+TGG | + | chr1.1:78480682-78480701 | MS.gene76287:intron | 35.0% |
!! | GAAAAGTATTTGGAGGTCTT+GGG | - | chr1.1:78480645-78480664 | None:intergenic | 35.0% |
!! | GAATCAAAAAGTGTCCTCTT+AGG | + | chr1.1:78480373-78480392 | MS.gene76287:intron | 35.0% |
!! | GATTGTTTCTGCTAGTTGAT+CGG | - | chr1.1:78478119-78478138 | None:intergenic | 35.0% |
!! | TATCCACATAAGTTGGTGTT+GGG | + | chr1.1:78480683-78480702 | MS.gene76287:intron | 35.0% |
!!! | TTCCCTTGTTTTTGTTGAAC+CGG | - | chr1.1:78481727-78481746 | None:intergenic | 35.0% |
AATAAGAAGAAACAGGGCGT+AGG | - | chr1.1:78478720-78478739 | None:intergenic | 40.0% | |
AATGGAAAGGGGAGTGATTA+AGG | - | chr1.1:78479388-78479407 | None:intergenic | 40.0% | |
ACGAGATAAGTAACGACCTT+GGG | - | chr1.1:78481474-78481493 | None:intergenic | 40.0% | |
AGCAATATTAAGCCTGAGTG+TGG | + | chr1.1:78479293-78479312 | MS.gene76287:intron | 40.0% | |
ATCGTCCTCTACATTGTCAA+AGG | - | chr1.1:78482135-78482154 | None:intergenic | 40.0% | |
ATGTATTTGTGGGAAGGGAA+AGG | + | chr1.1:78480846-78480865 | MS.gene76287:CDS | 40.0% | |
ATTCCTCTCTCTCGTATATG+AGG | + | chr1.1:78479180-78479199 | MS.gene76287:intron | 40.0% | |
ATTGGAGAAGGAAACCATTC+AGG | - | chr1.1:78479920-78479939 | None:intergenic | 40.0% | |
CAGAACTTATGTAGCCTAAG+AGG | - | chr1.1:78480390-78480409 | None:intergenic | 40.0% | |
CATCAGATGTATTTGTGGGA+AGG | + | chr1.1:78480840-78480859 | MS.gene76287:CDS | 40.0% | |
CATCCGACCTAGTGATAATA+AGG | - | chr1.1:78479128-78479147 | None:intergenic | 40.0% | |
CATGTCTGAATCTTCGTTTC+CGG | - | chr1.1:78477870-78477889 | None:intergenic | 40.0% | |
CTAAAGTCATAAGGACAAGG+AGG | + | chr1.1:78481823-78481842 | MS.gene76287:intron | 40.0% | |
CTAACTCCTCCATAAGTTGT+CGG | - | chr1.1:78478280-78478299 | None:intergenic | 40.0% | |
CTAAGAGATGACAGTGACTA+AGG | - | chr1.1:78478528-78478547 | None:intergenic | 40.0% | |
CTCAGCCAATAGGACATTAA+GGG | - | chr1.1:78477960-78477979 | None:intergenic | 40.0% | |
CTTATCACTGAGAGTGAGAT+TGG | - | chr1.1:78476492-78476511 | None:intergenic | 40.0% | |
CTTATTATCACTAGGTCGGA+TGG | + | chr1.1:78479126-78479145 | MS.gene76287:intron | 40.0% | |
GAAAAGAGTGGATGAATCCA+TGG | + | chr1.1:78477979-78477998 | MS.gene76287:CDS | 40.0% | |
GAAACAGGACAAACTCCTTT+GGG | + | chr1.1:78480950-78480969 | MS.gene76287:CDS | 40.0% | |
GAAAGTTTGATTACAGCACG+CGG | - | chr1.1:78479683-78479702 | None:intergenic | 40.0% | |
GAACTGATCTTCACAGAAGA+TGG | + | chr1.1:78479839-78479858 | MS.gene76287:CDS | 40.0% | |
GGATATATGGAGGATTGCAT+AGG | - | chr1.1:78480668-78480687 | None:intergenic | 40.0% | |
GTTCAATGTCCATGTCACAT+AGG | - | chr1.1:78480071-78480090 | None:intergenic | 40.0% | |
TAATTGACGCAGTACAGAAG+CGG | + | chr1.1:78480237-78480256 | MS.gene76287:intron | 40.0% | |
TAGAGTTTCAAAGCAGTCCA+CGG | - | chr1.1:78481621-78481640 | None:intergenic | 40.0% | |
TAGTCACTGTCATCTCTTAG+AGG | + | chr1.1:78478528-78478547 | MS.gene76287:CDS | 40.0% | |
TCTCAGCCAATAGGACATTA+AGG | - | chr1.1:78477961-78477980 | None:intergenic | 40.0% | |
TGAAACAGGACAAACTCCTT+TGG | + | chr1.1:78480949-78480968 | MS.gene76287:CDS | 40.0% | |
TGAACTCATCTACCTGTTGA+AGG | - | chr1.1:78480985-78481004 | None:intergenic | 40.0% | |
TGGTTCATGGTTTAGCAGAA+GGG | + | chr1.1:78477822-78477841 | MS.gene76287:CDS | 40.0% | |
TTAAGTGCTTGCTCAACAAC+TGG | - | chr1.1:78478598-78478617 | None:intergenic | 40.0% | |
TTCTGTGAAGATCAGTTCCA+GGG | - | chr1.1:78479837-78479856 | None:intergenic | 40.0% | |
TTGCAGAAGCAGTGATACTA+TGG | + | chr1.1:78480894-78480913 | MS.gene76287:CDS | 40.0% | |
TTGGTTCATGGTTTAGCAGA+AGG | + | chr1.1:78477821-78477840 | MS.gene76287:CDS | 40.0% | |
TTTGGATATGGAGGAGAAAG+GGG | + | chr1.1:78479889-78479908 | MS.gene76287:CDS | 40.0% | |
! | ACTAGCTCAGAAGTATATGC+AGG | - | chr1.1:78478391-78478410 | None:intergenic | 40.0% |
! | ACTGAGAATCTAGAAAGCAC+AGG | + | chr1.1:78479572-78479591 | MS.gene76287:CDS | 40.0% |
! | CTAACGGCGACATTTTCTTA+TGG | + | chr1.1:78481638-78481657 | MS.gene76287:intron | 40.0% |
! | CTGAGAATCTAGAAAGCACA+GGG | + | chr1.1:78479573-78479592 | MS.gene76287:CDS | 40.0% |
! | CTGTTGATAAATGCAATGCC+AGG | + | chr1.1:78479539-78479558 | MS.gene76287:CDS | 40.0% |
! | GAGAAGGTATATGTGTGTGT+GGG | + | chr1.1:78476581-78476600 | MS.gene76287:intron | 40.0% |
! | GGCATTAGCGTTGAAAAATC+TGG | + | chr1.1:78478177-78478196 | MS.gene76287:CDS | 40.0% |
! | GGCTTTCATTCTGGTTACTT+TGG | + | chr1.1:78477541-78477560 | MS.gene76287:intron | 40.0% |
! | TGTATTGCATGCATTGGTGT+CGG | + | chr1.1:78480155-78480174 | MS.gene76287:intron | 40.0% |
! | TTTTGGGCAAACGTTGAAAC+AGG | + | chr1.1:78480935-78480954 | MS.gene76287:CDS | 40.0% |
! | TTTTGTAAAGCTTACCGGAG+TGG | + | chr1.1:78480808-78480827 | MS.gene76287:CDS | 40.0% |
!! | AGACAATAATTGTTCGGTGC+CGG | + | chr1.1:78481705-78481724 | MS.gene76287:intron | 40.0% |
!! | AGGAGCTTTTTGAAGACGTA+GGG | + | chr1.1:78479444-78479463 | MS.gene76287:intron | 40.0% |
!! | GCATAGGGAAAAGTATTTGG+AGG | - | chr1.1:78480652-78480671 | None:intergenic | 40.0% |
!! | GGAAAAGTATTTGGAGGTCT+TGG | - | chr1.1:78480646-78480665 | None:intergenic | 40.0% |
!! | GGACTGCTTTGAAACTCTAA+CGG | + | chr1.1:78481622-78481641 | MS.gene76287:intron | 40.0% |
!! | TAGGAGCTTTTTGAAGACGT+AGG | + | chr1.1:78479443-78479462 | MS.gene76287:intron | 40.0% |
!! | TCGGTGCTAGATAGAGTATA+AGG | + | chr1.1:78480750-78480769 | MS.gene76287:intron | 40.0% |
!! | TGAATCCATGGTAGCTTTAG+AGG | + | chr1.1:78477991-78478010 | MS.gene76287:CDS | 40.0% |
!! | TGAGCACTGATTGAAAGCTT+AGG | - | chr1.1:78478763-78478782 | None:intergenic | 40.0% |
!! | TGCCGGTTCAACAAAAACAA+GGG | + | chr1.1:78481722-78481741 | MS.gene76287:intron | 40.0% |
AACCATGAACCAATGCAGCT+TGG | - | chr1.1:78477814-78477833 | None:intergenic | 45.0% | |
AATCTGCCAACCATCAACTC+GGG | + | chr1.1:78478135-78478154 | MS.gene76287:CDS | 45.0% | |
AATTGACGCAGTACAGAAGC+GGG | + | chr1.1:78480238-78480257 | MS.gene76287:intron | 45.0% | |
AGAAAGGGGAGATACCTGAA+TGG | + | chr1.1:78479903-78479922 | MS.gene76287:CDS | 45.0% | |
AGACCTCATATACGAGAGAG+AGG | - | chr1.1:78479186-78479205 | None:intergenic | 45.0% | |
AGGATGCTTCATGCTTCCTT+TGG | + | chr1.1:78479959-78479978 | MS.gene76287:intron | 45.0% | |
AGGCGAGAATCCGTTTCTTA+AGG | - | chr1.1:78478453-78478472 | None:intergenic | 45.0% | |
CAACGTTTGCCCAAAAGTCT+TGG | - | chr1.1:78480931-78480950 | None:intergenic | 45.0% | |
CAATCTGCCAACCATCAACT+CGG | + | chr1.1:78478134-78478153 | MS.gene76287:CDS | 45.0% | |
CGGAAACGAAGATTCAGACA+TGG | + | chr1.1:78477868-78477887 | MS.gene76287:CDS | 45.0% | |
CTTCTGCAGAAGCCTTCTTA+AGG | - | chr1.1:78477088-78477107 | None:intergenic | 45.0% | |
CTTCTGTGAAGATCAGTTCC+AGG | - | chr1.1:78479838-78479857 | None:intergenic | 45.0% | |
CTTGATGAAAGGGATCCTCT+TGG | - | chr1.1:78476443-78476462 | None:intergenic | 45.0% | |
CTTTAGCTGCTGCTGATGAT+TGG | + | chr1.1:78478653-78478672 | MS.gene76287:CDS | 45.0% | |
GACGAGATAAGTAACGACCT+TGG | - | chr1.1:78481475-78481494 | None:intergenic | 45.0% | |
GATCTGTACTCACCGTATGA+AGG | - | chr1.1:78477144-78477163 | None:intergenic | 45.0% | |
GCGAGATTTGGAAGCAACAT+AGG | - | chr1.1:78476552-78476571 | None:intergenic | 45.0% | |
GCTCGAGACTTTGCATGTTA+CGG | - | chr1.1:78478258-78478277 | None:intergenic | 45.0% | |
GGATCCCTTTCATCAAGCAT+TGG | + | chr1.1:78476446-78476465 | MS.gene76287:CDS | 45.0% | |
GTCCTCTACATTGTCAAAGG+CGG | - | chr1.1:78482132-78482151 | None:intergenic | 45.0% | |
GTGGATGGAAAATTCTACCG+TGG | + | chr1.1:78481601-78481620 | MS.gene76287:intron | 45.0% | |
TCAACAAACCACTCATCCTC+TGG | - | chr1.1:78482071-78482090 | None:intergenic | 45.0% | |
TCACTCTCAGTGATAAGCTC+CGG | + | chr1.1:78476495-78476514 | MS.gene76287:CDS | 45.0% | |
TCTCTTAGAGGCTAGTGGAA+TGG | + | chr1.1:78478540-78478559 | MS.gene76287:CDS | 45.0% | |
TGAAGACAACAATGCGCAGA+CGG | + | chr1.1:78480199-78480218 | MS.gene76287:intron | 45.0% | |
TGTCATCTCTTAGAGGCTAG+TGG | + | chr1.1:78478535-78478554 | MS.gene76287:CDS | 45.0% | |
TTCTTCAGTTCACGCTGTTC+CGG | - | chr1.1:78479761-78479780 | None:intergenic | 45.0% | |
TTGCTTATGCACCAACCAGT+AGG | + | chr1.1:78478680-78478699 | MS.gene76287:CDS | 45.0% | |
TTGGAAGCAACATAGGCACT+GGG | - | chr1.1:78476545-78476564 | None:intergenic | 45.0% | |
TTTGGAAGCAACATAGGCAC+TGG | - | chr1.1:78476546-78476565 | None:intergenic | 45.0% | |
! | AGTTTTCATAGTCCGGACTC+TGG | + | chr1.1:78477184-78477203 | MS.gene76287:intron | 45.0% |
! | CACTGATTGAAAGCTTAGGC+TGG | - | chr1.1:78478759-78478778 | None:intergenic | 45.0% |
! | CCACTCTTTTCTCAGCCAAT+AGG | - | chr1.1:78477970-78477989 | None:intergenic | 45.0% |
! | CCTATTGGCTGAGAAAAGAG+TGG | + | chr1.1:78477967-78477986 | MS.gene76287:CDS | 45.0% |
! | CGAGAAGGTATATGTGTGTG+TGG | + | chr1.1:78476580-78476599 | MS.gene76287:intron | 45.0% |
!! | AACATAGGCACTGGGATCAA+AGG | - | chr1.1:78476537-78476556 | None:intergenic | 45.0% |
!! | AACCAAGCTGCATTGGTTCA+TGG | + | chr1.1:78477809-78477828 | MS.gene76287:CDS | 45.0% |
!! | CTCTCAATTCTGGTGGATTC+CGG | - | chr1.1:78480331-78480350 | None:intergenic | 45.0% |
!! | GTGCCGGTTCAACAAAAACA+AGG | + | chr1.1:78481721-78481740 | MS.gene76287:intron | 45.0% |
!! | TCCATGGTAGCTTTAGAGGA+AGG | + | chr1.1:78477995-78478014 | MS.gene76287:CDS | 45.0% |
!! | TCCTTCCTCTAAAGCTACCA+TGG | - | chr1.1:78477999-78478018 | None:intergenic | 45.0% |
!! | TTAGCAGAAGGGTGTCAACT+CGG | + | chr1.1:78477833-78477852 | MS.gene76287:CDS | 45.0% |
AGAAGTAGCGTATGAGCACG+AGG | - | chr1.1:78478211-78478230 | None:intergenic | 50.0% | |
AGCCGCCTTTGACAATGTAG+AGG | + | chr1.1:78482127-78482146 | MS.gene76287:CDS | 50.0% | |
AGCCTGAGTGTGGTATGACT+TGG | + | chr1.1:78479303-78479322 | MS.gene76287:intron | 50.0% | |
AGTCTCGAGCCGACAACTTA+TGG | + | chr1.1:78478268-78478287 | MS.gene76287:CDS | 50.0% | |
ATCGATGCTGTTGCTGCTAC+AGG | + | chr1.1:78481533-78481552 | MS.gene76287:CDS | 50.0% | |
ATCTCGCAGCATGAACGAGA+AGG | + | chr1.1:78476565-78476584 | MS.gene76287:CDS | 50.0% | |
ATCTGCCAACCATCAACTCG+GGG | + | chr1.1:78478136-78478155 | MS.gene76287:CDS | 50.0% | |
ATCTTCGTTTCCGGTCACCA+AGG | - | chr1.1:78477861-78477880 | None:intergenic | 50.0% | |
CAAACTCCTTTGGGTCCTCT+CGG | + | chr1.1:78480959-78480978 | MS.gene76287:CDS | 50.0% | |
CACAGTTCTTCCTGTCCTCA+TGG | + | chr1.1:78481672-78481691 | MS.gene76287:intron | 50.0% | |
CACTCTCAGTGATAAGCTCC+GGG | + | chr1.1:78476496-78476515 | MS.gene76287:CDS | 50.0% | |
CTCGTTCATGCTGCGAGATT+TGG | - | chr1.1:78476564-78476583 | None:intergenic | 50.0% | |
GAATGACAGTGTCTTGCCAG+AGG | + | chr1.1:78482052-78482071 | MS.gene76287:intron | 50.0% | |
GATCCTCTTGGAGTCGTGAA+AGG | - | chr1.1:78476431-78476450 | None:intergenic | 50.0% | |
GCGTTGAAAAATCTGGGGGA+CGG | + | chr1.1:78478184-78478203 | MS.gene76287:CDS | 50.0% | |
GGGAACGGAGATTCGATCAA+CGG | + | chr1.1:78478156-78478175 | MS.gene76287:CDS | 50.0% | |
GGTGAAGTCCTTCTAGTGCA+AGG | - | chr1.1:78479496-78479515 | None:intergenic | 50.0% | |
GGTTAGCAAGCGCTAAACCT+AGG | + | chr1.1:78480259-78480278 | MS.gene76287:intron | 50.0% | |
GTCCAAGTCATACCACACTC+AGG | - | chr1.1:78479308-78479327 | None:intergenic | 50.0% | |
GTGCAAGGCCATCCAATTGT+AGG | - | chr1.1:78479481-78479500 | None:intergenic | 50.0% | |
TATGCAAGAGGTCCAGAGTC+CGG | - | chr1.1:78477199-78477218 | None:intergenic | 50.0% | |
TCACCTTTCACGACTCCAAG+AGG | + | chr1.1:78476425-78476444 | MS.gene76287:CDS | 50.0% | |
TCGATGCTGTTGCTGCTACA+GGG | + | chr1.1:78481534-78481553 | MS.gene76287:CDS | 50.0% | |
TGAGGACAGGAAGAACTGTG+AGG | - | chr1.1:78481672-78481691 | None:intergenic | 50.0% | |
TGTCTCAAGTCTCGACCATG+AGG | - | chr1.1:78481690-78481709 | None:intergenic | 50.0% | |
TTCTCAGTGACAGCTGAACC+TGG | - | chr1.1:78479560-78479579 | None:intergenic | 50.0% | |
! | ATCATGGGCTACTTGGCAGT+GGG | - | chr1.1:78478893-78478912 | None:intergenic | 50.0% |
! | TATCATGGGCTACTTGGCAG+TGG | - | chr1.1:78478894-78478913 | None:intergenic | 50.0% |
! | TTGGATGGCCTTGCACTAGA+AGG | + | chr1.1:78479485-78479504 | MS.gene76287:CDS | 50.0% |
ACCTCCTGATGCAGCTATCG+AGG | - | chr1.1:78478473-78478492 | None:intergenic | 55.0% | |
ATATGTGTGTGTGGGCGCGT+GGG | + | chr1.1:78476589-78476608 | MS.gene76287:intron | 55.0% | |
CAAGTCTCGACCATGAGGAC+AGG | - | chr1.1:78481685-78481704 | None:intergenic | 55.0% | |
CCAACCATCAACTCGGGGAA+CGG | + | chr1.1:78478141-78478160 | MS.gene76287:CDS | 55.0% | |
CTACAGGGCTAGATCCCAAC+AGG | + | chr1.1:78481549-78481568 | MS.gene76287:CDS | 55.0% | |
CTCGAGCCGACAACTTATGG+AGG | + | chr1.1:78478271-78478290 | MS.gene76287:CDS | 55.0% | |
CTTGGGTTCAAGCCCTACGA+AGG | - | chr1.1:78480628-78480647 | None:intergenic | 55.0% | |
GTAAAGCTTACCGGAGTGGC+AGG | + | chr1.1:78480812-78480831 | MS.gene76287:CDS | 55.0% | |
GTGTCTTGCCAGAGGATGAG+TGG | + | chr1.1:78482060-78482079 | MS.gene76287:intron | 55.0% | |
TATATGTGTGTGTGGGCGCG+TGG | + | chr1.1:78476588-78476607 | MS.gene76287:intron | 55.0% | |
TCAGACGATCAACTTCGCGC+TGG | - | chr1.1:78479790-78479809 | None:intergenic | 55.0% | |
TCTACCTGTTGAAGGCCGAG+AGG | - | chr1.1:78480977-78480996 | None:intergenic | 55.0% | |
TGATGCAATGCCTGCCACTC+CGG | - | chr1.1:78480825-78480844 | None:intergenic | 55.0% | |
TTCAGTTCACGCTGTTCCGG+AGG | - | chr1.1:78479758-78479777 | None:intergenic | 55.0% | |
TTTCTGCAGACAGCATGCCC+TGG | + | chr1.1:78479817-78479836 | MS.gene76287:CDS | 55.0% | |
! | AGGGTGTCAACTCGGTTCCT+TGG | + | chr1.1:78477841-78477860 | MS.gene76287:CDS | 55.0% |
! | ATCTCCGTTCCCCGAGTTGA+TGG | - | chr1.1:78478148-78478167 | None:intergenic | 55.0% |
! | CAACTCGGTTCCTTGGTGAC+CGG | + | chr1.1:78477848-78477867 | MS.gene76287:CDS | 55.0% |
!! | GCATGCATTGGTGTCGGACA+TGG | + | chr1.1:78480161-78480180 | MS.gene76287:intron | 55.0% |
CTCGCCTCGATAGCTGCATC+AGG | + | chr1.1:78478466-78478485 | MS.gene76287:CDS | 60.0% | |
GCCTCGATAGCTGCATCAGG+AGG | + | chr1.1:78478469-78478488 | MS.gene76287:CDS | 60.0% | |
TGAAGGCCGAGAGGACCCAA+AGG | - | chr1.1:78480968-78480987 | None:intergenic | 60.0% | |
!! | CCGTTCCCCGAGTTGATGGT+TGG | - | chr1.1:78478144-78478163 | None:intergenic | 60.0% |
GGGTCCTCTCGGCCTTCAAC+AGG | + | chr1.1:78480970-78480989 | MS.gene76287:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 78476407 | 78482172 | 78476407 | ID=MS.gene76287 |
chr1.1 | mRNA | 78476407 | 78482172 | 78476407 | ID=MS.gene76287.t1;Parent=MS.gene76287 |
chr1.1 | exon | 78476407 | 78476586 | 78476407 | ID=MS.gene76287.t1.exon1;Parent=MS.gene76287.t1 |
chr1.1 | CDS | 78476407 | 78476586 | 78476407 | ID=cds.MS.gene76287.t1;Parent=MS.gene76287.t1 |
chr1.1 | exon | 78477053 | 78477150 | 78477053 | ID=MS.gene76287.t1.exon2;Parent=MS.gene76287.t1 |
chr1.1 | CDS | 78477053 | 78477150 | 78477053 | ID=cds.MS.gene76287.t1;Parent=MS.gene76287.t1 |
chr1.1 | exon | 78477748 | 78478804 | 78477748 | ID=MS.gene76287.t1.exon3;Parent=MS.gene76287.t1 |
chr1.1 | CDS | 78477748 | 78478804 | 78477748 | ID=cds.MS.gene76287.t1;Parent=MS.gene76287.t1 |
chr1.1 | exon | 78479446 | 78479946 | 78479446 | ID=MS.gene76287.t1.exon4;Parent=MS.gene76287.t1 |
chr1.1 | CDS | 78479446 | 78479946 | 78479446 | ID=cds.MS.gene76287.t1;Parent=MS.gene76287.t1 |
chr1.1 | exon | 78480803 | 78480991 | 78480803 | ID=MS.gene76287.t1.exon5;Parent=MS.gene76287.t1 |
chr1.1 | CDS | 78480803 | 78480991 | 78480803 | ID=cds.MS.gene76287.t1;Parent=MS.gene76287.t1 |
chr1.1 | exon | 78481434 | 78481570 | 78481434 | ID=MS.gene76287.t1.exon6;Parent=MS.gene76287.t1 |
chr1.1 | CDS | 78481434 | 78481570 | 78481434 | ID=cds.MS.gene76287.t1;Parent=MS.gene76287.t1 |
chr1.1 | exon | 78482061 | 78482172 | 78482061 | ID=MS.gene76287.t1.exon7;Parent=MS.gene76287.t1 |
chr1.1 | CDS | 78482061 | 78482172 | 78482061 | ID=cds.MS.gene76287.t1;Parent=MS.gene76287.t1 |
Gene Sequence |
Protein sequence |