AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76325

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76325.t1 MTR_6g037610 74.217 415 13 6 1 331 1 405 9.53e-132 381
MS.gene76325.t1 MTR_1g098460 45.370 216 56 6 163 325 146 352 5.12e-36 134
MS.gene76325.t1 MTR_8g092460 40.758 211 71 7 49 216 6 205 1.84e-35 131
MS.gene76325.t1 MTR_7g020980 48.031 127 52 2 146 270 41 155 2.87e-32 119
MS.gene76325.t1 MTR_3g095190 38.462 286 119 7 1 250 1 265 3.45e-32 123
MS.gene76325.t1 MTR_7g021010 75.385 65 16 0 151 215 46 110 2.02e-30 114
MS.gene76325.t1 MTR_7g021010 75.385 65 16 0 151 215 7 71 4.37e-30 112
MS.gene76325.t1 MTR_4g086190 72.464 69 16 1 156 221 96 164 1.38e-28 110
MS.gene76325.t1 MTR_4g086165 82.759 58 10 0 155 212 81 138 1.71e-28 109
MS.gene76325.t1 MTR_4g086160 84.211 57 9 0 156 212 96 152 2.77e-28 110
MS.gene76325.t1 MTR_4g086220 84.211 57 9 0 156 212 96 152 5.59e-28 109
MS.gene76325.t1 MTR_2g435590 64.865 74 26 0 152 225 92 165 3.24e-26 105
MS.gene76325.t1 MTR_8g022820 70.588 68 19 1 147 213 113 180 5.85e-26 107
MS.gene76325.t1 MTR_8g022820 70.588 68 19 1 147 213 114 181 5.92e-26 107
MS.gene76325.t1 MTR_8g022820 70.588 68 19 1 147 213 114 181 5.92e-26 107
MS.gene76325.t1 MTR_2g078680 73.438 64 17 0 155 218 30 93 8.10e-26 102
MS.gene76325.t1 MTR_2g105380 71.429 63 18 0 151 213 112 174 8.70e-26 106
MS.gene76325.t1 MTR_5g085100 54.945 91 41 0 122 212 12 102 9.42e-26 104
MS.gene76325.t1 MTR_3g098580 68.889 90 27 1 129 217 48 137 5.53e-25 102
MS.gene76325.t1 MTR_1g087920 69.355 62 19 0 151 212 72 133 1.24e-24 102
MS.gene76325.t1 MTR_2g014340 64.286 70 25 0 149 218 12 81 2.84e-24 98.6
MS.gene76325.t1 MTR_3g053690 60.494 81 27 1 132 212 8 83 7.72e-24 97.8
MS.gene76325.t1 MTR_4g078710 68.657 67 14 1 156 222 28 87 8.91e-24 97.4
MS.gene76325.t1 MTR_5g085070 58.750 80 33 0 133 212 28 107 9.42e-24 99.0
MS.gene76325.t1 MTR_4g100380 71.429 70 19 1 154 222 143 212 1.04e-23 98.6
MS.gene76325.t1 MTR_4g100420 66.176 68 22 1 152 218 153 220 2.10e-23 98.6
MS.gene76325.t1 MTR_1g074310 67.164 67 21 1 147 212 12 78 3.03e-23 94.0
MS.gene76325.t1 MTR_2g438180 68.182 66 20 1 149 213 7 72 4.15e-23 93.2
MS.gene76325.t1 MTR_2g015050 75.000 60 14 1 154 212 132 191 4.30e-23 97.1
MS.gene76325.t1 MTR_1g048610 63.768 69 24 1 148 215 81 149 6.00e-23 95.5
MS.gene76325.t1 MTR_8g006840 59.036 83 31 2 138 217 105 187 9.54e-23 94.4
MS.gene76325.t1 MTR_1g028560 66.667 66 18 1 154 215 113 178 1.47e-22 97.1
MS.gene76325.t1 MTR_4g100450 69.231 65 19 1 152 215 150 214 1.54e-22 96.3
MS.gene76325.t1 MTR_8g006815 67.188 64 20 1 155 217 95 158 1.56e-22 93.6
MS.gene76325.t1 MTR_5g009620 54.444 90 34 3 154 237 110 198 1.56e-22 96.3
MS.gene76325.t1 MTR_8g069360 55.556 90 37 2 155 241 43 132 1.63e-22 97.8
MS.gene76325.t1 MTR_1g090290 52.000 100 38 3 128 222 86 180 3.31e-22 92.8
MS.gene76325.t1 MTR_7g081805 58.667 75 29 2 154 226 59 133 5.09e-22 92.4
MS.gene76325.t1 MTR_4g088005 62.500 64 23 1 152 214 53 116 7.67e-22 89.7
MS.gene76325.t1 MTR_4g008860 54.118 85 34 1 153 237 5 84 8.18e-22 91.7
MS.gene76325.t1 MTR_1g074230 71.186 59 16 1 155 212 18 76 1.71e-21 89.0
MS.gene76325.t1 MTR_2g014300 62.857 70 26 0 143 212 2 71 1.74e-21 90.1
MS.gene76325.t1 MTR_2g015040 67.213 61 19 1 153 212 60 120 1.83e-21 89.7
MS.gene76325.t1 MTR_1g070070 72.881 59 15 1 155 212 20 78 2.02e-21 89.4
MS.gene76325.t1 MTR_4g054360 69.841 63 18 1 154 215 122 184 2.21e-21 92.0
MS.gene76325.t1 MTR_6g088405 58.108 74 29 1 156 229 44 115 2.35e-21 90.9
MS.gene76325.t1 MTR_3g090760 51.899 79 37 1 154 231 111 189 2.55e-21 93.6
MS.gene76325.t1 MTR_8g006825 61.765 68 25 1 154 220 94 161 3.23e-21 90.5
MS.gene76325.t1 MTR_4g054740 67.188 64 20 1 153 215 94 157 3.42e-21 90.9
MS.gene76325.t1 MTR_7g081815 65.079 63 21 1 154 215 59 121 3.87e-21 90.1
MS.gene76325.t1 MTR_2g089170 66.667 60 20 0 153 212 62 121 4.03e-21 89.7
MS.gene76325.t1 MTR_3g106290 66.667 60 20 0 155 214 7 66 4.13e-21 89.7
MS.gene76325.t1 MTR_3g110205 45.217 115 58 3 156 270 43 152 4.19e-21 89.4
MS.gene76325.t1 MTR_2g103700 62.903 62 23 0 154 215 5 66 4.29e-21 89.0
MS.gene76325.t1 MTR_5g062700 69.492 59 18 0 154 212 171 229 5.22e-21 92.8
MS.gene76325.t1 MTR_3g074130 67.797 59 19 0 154 212 148 206 7.48e-21 92.0
MS.gene76325.t1 MTR_7g081795 65.079 63 21 1 154 215 58 120 8.11e-21 89.4
MS.gene76325.t1 MTR_8g090350 41.406 128 66 4 154 276 111 234 1.38e-20 90.5
MS.gene76325.t1 MTR_4g114570 62.295 61 23 0 152 212 3 63 1.86e-20 88.6
MS.gene76325.t1 MTR_4g010640 64.407 59 21 0 154 212 5 63 2.10e-20 88.2
MS.gene76325.t1 MTR_5g032820 56.098 82 27 3 155 234 45 119 2.93e-20 90.5
MS.gene76325.t1 MTR_7g096700 64.179 67 23 1 147 212 11 77 4.01e-20 85.5
MS.gene76325.t1 MTR_5g016750 61.667 60 23 0 154 213 23 82 4.27e-20 86.7
MS.gene76325.t1 MTR_8g102800 51.648 91 34 2 141 222 13 102 4.45e-20 87.8
MS.gene76325.t1 MTR_4g054860 65.625 64 21 1 153 215 128 191 4.78e-20 88.6
MS.gene76325.t1 MTR_0939s0010 65.000 60 21 0 153 212 62 121 5.13e-20 86.7
MS.gene76325.t1 MTR_3g102100 46.154 91 46 1 126 213 12 102 5.23e-20 86.3
MS.gene76325.t1 MTR_8g099215 65.517 58 20 0 154 211 105 162 5.46e-20 89.4
MS.gene76325.t1 MTR_5g082950 67.797 59 19 0 153 211 63 121 5.86e-20 89.4
MS.gene76325.t1 MTR_4g100650 60.000 65 25 1 156 220 74 137 6.63e-20 87.8
MS.gene76325.t1 MTR_2g090235 65.000 60 21 0 154 213 216 275 7.17e-20 90.1
MS.gene76325.t1 MTR_2g101340 56.716 67 28 1 156 222 41 106 8.96e-20 86.3
MS.gene76325.t1 MTR_7g096750 70.000 60 17 1 155 213 19 78 9.42e-20 84.3
MS.gene76325.t1 MTR_8g006410 59.091 66 27 0 156 221 52 117 9.82e-20 86.3
MS.gene76325.t1 MTR_7g117690 44.318 88 49 0 134 221 6 93 1.01e-19 85.1
MS.gene76325.t1 MTR_6g033255 47.287 129 64 2 150 274 14 142 1.22e-19 86.3
MS.gene76325.t1 MTR_7g046260 59.701 67 26 1 156 222 61 126 1.28e-19 86.7
MS.gene76325.t1 MTR_1g090170 57.143 70 29 1 150 219 146 214 1.56e-19 87.8
MS.gene76325.t1 MTR_7g011630 66.102 59 20 0 153 211 39 97 1.61e-19 89.4
MS.gene76325.t1 MTR_8g027465 41.414 99 56 1 126 222 9 107 1.64e-19 84.7
MS.gene76325.t1 MTR_1g090170 57.143 70 29 1 150 219 233 301 1.66e-19 89.0
MS.gene76325.t1 MTR_6g012970 59.420 69 28 0 143 211 25 93 1.67e-19 89.0
MS.gene76325.t1 MTR_7g084370 70.175 57 17 0 155 211 41 97 1.70e-19 87.4
MS.gene76325.t1 MTR_2g019750 48.235 85 34 1 155 229 49 133 1.94e-19 87.4
MS.gene76325.t1 MTR_1g019110 62.069 58 22 0 156 213 44 101 2.62e-19 84.3
MS.gene76325.t1 MTR_1g014820 41.237 97 57 0 154 250 25 121 4.01e-19 85.9
MS.gene76325.t1 MTR_7g092190 43.519 108 55 2 156 257 30 137 4.14e-19 86.3
MS.gene76325.t1 MTR_5g075570 64.912 57 20 0 156 212 124 180 4.60e-19 85.9
MS.gene76325.t1 MTR_5g012910 54.054 74 32 1 156 229 28 99 5.07e-19 83.6
MS.gene76325.t1 MTR_4g082345 44.800 125 65 3 123 243 13 137 5.08e-19 86.7
MS.gene76325.t1 MTR_8g013860 56.716 67 28 1 156 222 47 112 8.00e-19 83.6
MS.gene76325.t1 MTR_1g070015 62.903 62 22 1 151 211 79 140 9.27e-19 84.0
MS.gene76325.t1 MTR_2g043050 59.322 59 24 0 156 214 19 77 1.54e-18 83.2
MS.gene76325.t1 MTR_4g119270 61.404 57 22 0 155 211 52 108 1.58e-18 85.5
MS.gene76325.t1 MTR_1g070020 62.903 62 22 1 151 211 65 126 1.72e-18 83.2
MS.gene76325.t1 MTR_1g069985 51.163 86 40 2 127 211 47 131 2.04e-18 82.8
MS.gene76325.t1 MTR_4g035430 46.341 82 43 1 156 237 32 112 2.33e-18 82.8
MS.gene76325.t1 MTR_5g083340 60.606 66 24 1 155 218 84 149 2.36e-18 85.5
MS.gene76325.t1 MTR_1g070000 62.295 61 22 1 152 211 80 140 3.30e-18 82.4
MS.gene76325.t1 MTR_8g085960 59.016 61 25 0 151 211 20 80 3.48e-18 82.8
MS.gene76325.t1 MTR_1g074250 63.333 60 20 1 155 212 18 77 3.68e-18 79.7
MS.gene76325.t1 MTR_2g043030 57.627 59 25 0 156 214 19 77 5.40e-18 81.3
MS.gene76325.t1 MTR_7g085810 59.016 61 25 0 155 215 29 89 5.51e-18 82.4
MS.gene76325.t1 MTR_1g070045 62.903 62 22 1 151 211 61 122 6.45e-18 80.5
MS.gene76325.t1 MTR_1g014860 55.932 59 26 0 154 212 20 78 6.95e-18 81.6
MS.gene76325.t1 MTR_1g014780 52.308 65 31 0 154 218 36 100 9.20e-18 81.3
MS.gene76325.t1 MTR_6g029180 56.923 65 28 0 151 215 28 92 1.01e-17 82.8
MS.gene76325.t1 MTR_6g466130 39.655 116 67 2 128 243 40 152 1.02e-17 81.3
MS.gene76325.t1 MTR_7g096810 69.355 62 18 1 155 215 12 73 1.15e-17 78.6
MS.gene76325.t1 MTR_1g014800 42.529 87 50 0 126 212 1 87 1.22e-17 80.9
MS.gene76325.t1 MTR_1g069960 74.576 59 14 1 155 212 26 84 1.23e-17 79.0
MS.gene76325.t1 MTR_8g032610 50.633 79 39 0 154 232 25 103 1.51e-17 82.0
MS.gene76325.t1 MTR_5g083330 58.065 62 26 0 152 213 31 92 2.30e-17 81.6
MS.gene76325.t1 MTR_1g040430 51.000 100 47 2 124 222 80 178 2.55e-17 79.3
MS.gene76325.t1 MTR_6g465690 41.346 104 58 2 128 231 37 137 3.47e-17 80.5
MS.gene76325.t1 MTR_1g070035 61.667 60 22 1 153 211 74 133 3.81e-17 79.3
MS.gene76325.t1 MTR_4g111915 57.377 61 26 0 152 212 49 109 4.24e-17 77.4
MS.gene76325.t1 MTR_6g465850 43.878 98 53 2 156 253 63 158 4.28e-17 80.5
MS.gene76325.t1 MTR_6g465510 50.000 76 37 1 156 231 33 107 4.77e-17 79.0
MS.gene76325.t1 MTR_6g465530 42.105 95 54 1 156 250 33 126 5.34e-17 78.6
MS.gene76325.t1 MTR_6g466000 38.793 116 68 2 128 243 31 143 5.39e-17 79.3
MS.gene76325.t1 MTR_2g043040 55.932 59 26 0 156 214 19 77 5.68e-17 79.3
MS.gene76325.t1 MTR_4g112490 57.377 61 26 0 152 212 49 109 5.84e-17 78.6
MS.gene76325.t1 MTR_1g069940 70.312 64 18 1 153 215 92 155 6.72e-17 79.3
MS.gene76325.t1 MTR_2g016730 59.322 59 24 0 153 211 20 78 1.07e-16 80.1
MS.gene76325.t1 MTR_6g466020 40.000 95 55 1 127 221 16 108 1.12e-16 77.0
MS.gene76325.t1 MTR_3g105510 45.455 66 36 0 148 213 29 94 1.39e-16 78.2
MS.gene76325.t1 MTR_1g069945 71.875 64 17 1 153 215 98 161 1.70e-16 78.2
MS.gene76325.t1 MTR_3g017420 50.000 68 34 0 163 230 2 69 1.76e-16 73.6
MS.gene76325.t1 MTR_6g465430 42.857 98 54 2 156 253 54 149 1.80e-16 78.2
MS.gene76325.t1 MTR_1g101600 48.684 76 38 1 156 231 41 115 3.14e-16 76.6
MS.gene76325.t1 MTR_6g465460 41.667 96 55 1 156 251 54 148 3.27e-16 77.8
MS.gene76325.t1 MTR_7g096830 69.231 65 19 1 152 215 94 158 3.52e-16 77.0
MS.gene76325.t1 MTR_1g097190 57.895 57 23 1 156 211 23 79 5.10e-16 74.3
MS.gene76325.t1 MTR_2g043020 54.237 59 27 0 156 214 19 77 6.04e-16 75.9
MS.gene76325.t1 MTR_6g088425 62.687 67 24 1 156 222 49 114 7.64e-16 76.3
MS.gene76325.t1 MTR_6g465420 31.250 144 90 3 156 298 54 189 1.20e-15 76.3
MS.gene76325.t1 MTR_7g096780 67.692 65 20 1 152 215 81 145 1.44e-15 75.5
MS.gene76325.t1 MTR_5g008590 59.701 67 26 1 156 222 11 76 1.46e-15 74.3
MS.gene76325.t1 MTR_6g465450 55.000 60 27 0 156 215 54 113 1.90e-15 75.1
MS.gene76325.t1 MTR_8g023680 62.500 48 18 0 155 202 115 162 2.20e-15 76.6
MS.gene76325.t1 MTR_1g012470 65.574 61 21 0 152 212 3 63 2.50e-15 73.9
MS.gene76325.t1 MTR_1g006660 61.194 67 25 1 156 222 47 112 2.61e-15 75.1
MS.gene76325.t1 MTR_7g070220 58.730 63 19 1 156 211 78 140 3.18e-15 76.6
MS.gene76325.t1 MTR_3g112440 63.492 63 23 0 156 218 39 101 6.73e-15 73.2
MS.gene76325.t1 MTR_1g023170 57.143 70 25 1 156 225 40 104 9.26e-15 73.6
MS.gene76325.t1 MTR_1g110970 54.098 61 24 1 155 211 96 156 9.85e-15 74.3
MS.gene76325.t1 MTR_5g085125 53.125 64 30 0 149 212 9 72 1.31e-14 71.2
MS.gene76325.t1 MTR_8g023700 61.111 54 17 1 153 202 110 163 2.00e-14 73.6
MS.gene76325.t1 MTR_3g105480 51.786 56 27 0 158 213 33 88 2.07e-14 72.0
MS.gene76325.t1 MTR_1g043350 53.846 78 35 1 135 211 61 138 3.07e-14 71.2
MS.gene76325.t1 MTR_1g074370 64.615 65 22 1 152 215 69 133 3.37e-14 70.9
MS.gene76325.t1 MTR_4g102670 57.895 57 23 1 156 212 15 70 3.84e-14 69.7
MS.gene76325.t1 MTR_3g107380 62.903 62 23 0 151 212 3 64 4.58e-14 70.5
MS.gene76325.t1 MTR_5g008790 44.444 81 39 2 154 232 16 92 1.27e-13 68.2
MS.gene76325.t1 MTR_5g008540 45.902 61 33 0 158 218 26 86 1.30e-13 66.2
MS.gene76325.t1 MTR_1g105400 58.333 48 20 0 155 202 114 161 1.80e-13 70.9
MS.gene76325.t1 MTR_5g008470 48.438 64 32 1 158 220 77 140 2.09e-13 68.2
MS.gene76325.t1 MTR_2g085015 50.746 67 30 3 156 220 47 112 2.57e-13 68.9
MS.gene76325.t1 MTR_5g057810 70.732 41 12 0 155 195 87 127 6.53e-13 68.6
MS.gene76325.t1 MTR_5g057647 70.732 41 12 0 155 195 87 127 6.53e-13 68.6
MS.gene76325.t1 MTR_7g028925 50.794 63 28 1 156 218 29 88 8.68e-13 63.9
MS.gene76325.t1 MTR_4g009260 62.319 69 24 1 154 222 75 141 2.87e-12 65.5
MS.gene76325.t1 MTR_1g093600 57.143 56 22 1 155 210 63 116 4.05e-12 67.0
MS.gene76325.t1 MTR_5g009410 65.574 61 21 0 152 212 113 173 7.63e-12 65.9
MS.gene76325.t1 MTR_3g072610 45.263 95 49 2 149 240 18 112 7.76e-12 64.3
MS.gene76325.t1 MTR_5g058470 51.351 74 35 1 149 221 89 162 1.10e-11 65.1
MS.gene76325.t1 MTR_5g053920 54.386 57 24 1 155 211 65 119 1.29e-11 65.5
MS.gene76325.t1 MTR_5g010940 48.438 64 27 1 156 213 54 117 2.22e-11 63.2
MS.gene76325.t1 MTR_5g008550 50.000 66 32 1 156 220 21 86 3.18e-11 62.0
MS.gene76325.t1 MTR_5g010930 48.438 64 27 1 156 213 49 112 3.41e-11 62.8
MS.gene76325.t1 MTR_5g010910 48.438 64 27 1 156 213 49 112 3.45e-11 62.8
MS.gene76325.t1 MTR_1g101550 57.143 63 26 1 155 217 56 117 6.51e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76325.t1 AT5G61890 76.000 75 17 1 143 216 76 150 9.97e-33 122
MS.gene76325.t1 AT2G33710 66.265 83 28 0 134 216 48 130 3.57e-32 120
MS.gene76325.t1 AT2G33710 66.265 83 28 0 134 216 48 130 4.71e-32 120
MS.gene76325.t1 AT5G13330 79.688 64 13 0 152 215 35 98 2.10e-30 115
MS.gene76325.t1 AT5G50080 54.861 144 48 4 147 290 77 203 3.99e-30 114
MS.gene76325.t1 AT5G50080 54.861 144 48 4 147 290 68 194 4.15e-30 114
MS.gene76325.t1 AT1G43160 64.762 105 34 2 112 215 18 120 2.09e-28 109
MS.gene76325.t1 AT5G64750 82.759 58 10 0 163 220 192 249 2.59e-27 110
MS.gene76325.t1 AT2G47520 72.581 62 17 0 151 212 45 106 8.28e-27 104
MS.gene76325.t1 AT1G03800 61.842 76 27 1 139 212 34 109 1.97e-26 105
MS.gene76325.t1 AT5G47230 73.529 68 17 1 149 215 149 216 1.03e-25 104
MS.gene76325.t1 AT1G72360 54.444 90 41 0 123 212 43 132 1.84e-25 103
MS.gene76325.t1 AT1G72360 70.968 62 18 0 151 212 20 81 2.95e-25 101
MS.gene76325.t1 AT3G16770 68.657 67 18 1 150 213 70 136 5.29e-25 101
MS.gene76325.t1 AT3G15210 77.586 58 13 0 155 212 24 81 5.34e-25 100
MS.gene76325.t1 AT1G72360 70.968 62 18 0 151 212 69 130 5.57e-25 102
MS.gene76325.t1 AT1G28370 74.138 58 15 0 155 212 19 76 5.80e-25 99.4
MS.gene76325.t1 AT2G22200 45.133 113 58 1 149 261 64 172 5.91e-25 102
MS.gene76325.t1 AT1G28370 59.494 79 31 1 134 212 37 114 6.14e-25 100
MS.gene76325.t1 AT4G11140 51.485 101 29 2 154 254 85 165 8.94e-25 102
MS.gene76325.t1 AT4G17500 65.116 86 26 2 138 222 133 215 2.36e-24 100
MS.gene76325.t1 AT5G47220 57.778 90 37 1 134 222 95 184 2.69e-24 99.8
MS.gene76325.t1 AT5G07310 79.412 68 13 1 147 213 82 149 3.02e-24 100
MS.gene76325.t1 AT5G44210 77.193 57 13 0 156 212 33 89 3.36e-24 98.2
MS.gene76325.t1 AT4G27950 57.317 82 29 2 149 229 111 187 8.82e-24 100
MS.gene76325.t1 AT5G51190 73.333 60 15 1 154 212 70 129 3.93e-23 95.9
MS.gene76325.t1 AT4G17490 66.176 68 22 1 149 215 130 197 6.06e-23 96.7
MS.gene76325.t1 AT1G12980 54.118 85 39 0 138 222 39 123 7.26e-23 97.4
MS.gene76325.t1 AT5G61600 67.188 64 20 1 154 216 86 149 1.47e-22 94.7
MS.gene76325.t1 AT4G34410 41.916 167 86 4 56 212 27 192 3.49e-22 94.4
MS.gene76325.t1 AT3G20310 68.852 61 19 0 155 215 26 86 6.26e-22 93.2
MS.gene76325.t1 AT4G06746 61.290 62 24 0 154 215 34 95 6.48e-22 90.5
MS.gene76325.t1 AT5G53290 66.667 60 20 0 152 211 121 180 7.01e-22 95.1
MS.gene76325.t1 AT1G15360 63.492 63 23 0 152 214 3 65 8.30e-22 91.7
MS.gene76325.t1 AT1G15360 63.492 63 23 0 152 214 3 65 8.30e-22 91.7
MS.gene76325.t1 AT1G50640 72.414 58 16 0 155 212 27 84 1.12e-21 92.0
MS.gene76325.t1 AT5G43410 68.750 64 19 1 150 212 9 72 1.17e-21 89.4
MS.gene76325.t1 AT2G20880 58.108 74 31 0 154 227 185 258 1.60e-21 94.0
MS.gene76325.t1 AT4G36900 50.588 85 39 1 132 213 3 87 2.05e-21 90.5
MS.gene76325.t1 AT2G44840 48.624 109 48 3 126 229 65 170 2.06e-21 91.3
MS.gene76325.t1 AT1G22190 66.667 60 20 0 154 213 81 140 2.43e-21 92.0
MS.gene76325.t1 AT5G65130 50.000 84 42 0 133 216 90 173 2.50e-21 92.4
MS.gene76325.t1 AT5G65130 50.000 84 42 0 133 216 88 171 2.52e-21 92.4
MS.gene76325.t1 AT2G25820 56.579 76 32 1 156 231 26 100 2.57e-21 91.3
MS.gene76325.t1 AT4G39780 65.574 61 21 0 153 213 90 150 3.64e-21 91.7
MS.gene76325.t1 AT1G75490 51.852 81 36 1 156 236 42 119 4.04e-21 90.1
MS.gene76325.t1 AT5G13910 64.179 67 21 1 155 221 19 82 4.46e-21 90.1
MS.gene76325.t1 AT1G78080 66.667 63 20 1 154 216 150 211 5.93e-21 92.4
MS.gene76325.t1 AT1G36060 67.797 59 19 0 154 212 141 199 5.97e-21 92.0
MS.gene76325.t1 AT4G32800 58.209 67 27 1 156 222 19 84 6.81e-21 89.7
MS.gene76325.t1 AT1G71450 59.701 67 26 1 156 222 24 89 7.31e-21 89.0
MS.gene76325.t1 AT3G16280 60.563 71 27 1 152 222 57 126 9.47e-21 89.7
MS.gene76325.t1 AT1G28360 71.930 57 16 0 156 212 12 68 9.58e-21 88.6
MS.gene76325.t1 AT5G25390 64.407 59 21 0 154 212 5 63 1.02e-20 88.6
MS.gene76325.t1 AT4G28140 64.516 62 22 0 154 215 141 202 1.13e-20 90.9
MS.gene76325.t1 AT3G16280 62.687 67 24 1 156 222 79 144 1.27e-20 89.7
MS.gene76325.t1 AT3G57600 46.535 101 47 1 155 248 27 127 1.29e-20 90.5
MS.gene76325.t1 AT3G60490 41.085 129 61 3 148 264 51 176 1.66e-20 89.7
MS.gene76325.t1 AT4G23750 51.064 94 34 2 118 211 96 177 2.34e-20 90.9
MS.gene76325.t1 AT4G23750 51.064 94 34 2 118 211 96 177 2.34e-20 90.9
MS.gene76325.t1 AT5G18560 57.746 71 27 1 155 222 54 124 2.40e-20 90.9
MS.gene76325.t1 AT2G46310 53.571 84 29 2 155 238 98 171 2.57e-20 89.7
MS.gene76325.t1 AT5G25190 62.500 64 24 0 155 218 7 70 2.73e-20 87.0
MS.gene76325.t1 AT5G07580 58.667 75 29 2 139 212 94 167 3.48e-20 87.4
MS.gene76325.t1 AT3G23230 69.492 59 17 1 155 212 19 77 3.91e-20 85.5
MS.gene76325.t1 AT2G35700 65.517 58 20 0 156 213 45 102 4.69e-20 87.0
MS.gene76325.t1 AT1G74930 50.649 77 33 1 155 226 20 96 6.83e-20 86.7
MS.gene76325.t1 AT2G36450 53.012 83 36 2 147 228 6 86 6.96e-20 86.3
MS.gene76325.t1 AT3G61630 58.571 70 23 1 154 223 103 166 7.29e-20 89.0
MS.gene76325.t1 AT2G23340 62.069 58 22 0 156 213 28 85 7.69e-20 85.9
MS.gene76325.t1 AT4G13620 66.667 60 20 0 154 213 230 289 1.05e-19 89.4
MS.gene76325.t1 AT1G01250 41.509 106 58 2 126 229 13 116 1.05e-19 85.9
MS.gene76325.t1 AT2G44940 59.375 64 26 0 150 213 94 157 1.27e-19 87.8
MS.gene76325.t1 AT3G11020 66.129 62 21 0 156 217 78 139 1.31e-19 88.6
MS.gene76325.t1 AT5G11590 56.757 74 30 1 156 229 51 122 1.42e-19 86.7
MS.gene76325.t1 AT1G19210 56.667 60 26 0 155 214 11 70 1.81e-19 85.1
MS.gene76325.t1 AT2G31230 63.636 66 23 1 151 215 81 146 1.92e-19 86.3
MS.gene76325.t1 AT5G67190 61.667 60 23 0 154 213 19 78 1.92e-19 85.1
MS.gene76325.t1 AT3G50260 51.351 74 36 0 140 213 5 78 2.28e-19 84.0
MS.gene76325.t1 AT1G46768 59.016 61 25 0 153 213 28 88 3.68e-19 83.2
MS.gene76325.t1 AT1G46768 59.016 61 25 0 153 213 28 88 3.68e-19 83.2
MS.gene76325.t1 AT1G46768 59.016 61 25 0 153 213 28 88 3.90e-19 82.8
MS.gene76325.t1 AT1G24590 68.421 57 18 0 155 211 57 113 4.46e-19 86.7
MS.gene76325.t1 AT4G16750 63.793 58 21 0 156 213 40 97 4.77e-19 83.6
MS.gene76325.t1 AT5G25810 57.353 68 28 1 146 213 27 93 9.55e-19 84.0
MS.gene76325.t1 AT5G19790 58.462 65 27 0 147 211 13 77 2.19e-18 83.6
MS.gene76325.t1 AT1G21910 59.649 57 23 0 156 212 50 106 2.30e-18 83.2
MS.gene76325.t1 AT5G21960 56.250 64 28 0 155 218 6 69 2.74e-18 82.4
MS.gene76325.t1 AT1G12890 47.778 90 47 0 136 225 1 90 2.96e-18 82.4
MS.gene76325.t1 AT5G25390 62.712 59 19 1 154 212 5 60 3.24e-18 81.6
MS.gene76325.t1 AT5G05410 31.217 189 105 4 153 317 76 263 3.63e-18 84.0
MS.gene76325.t1 AT4G25490 48.315 89 44 1 135 221 25 113 4.39e-18 82.0
MS.gene76325.t1 AT5G05410 63.333 60 22 0 153 212 76 135 5.11e-18 84.0
MS.gene76325.t1 AT3G23240 62.500 64 23 1 149 211 75 138 5.19e-18 82.0
MS.gene76325.t1 AT5G18450 62.500 56 21 0 156 211 34 89 6.73e-18 83.2
MS.gene76325.t1 AT1G28160 60.606 66 23 1 155 220 38 100 7.40e-18 82.0
MS.gene76325.t1 AT4G18450 66.667 60 18 2 154 211 108 167 7.94e-18 82.8
MS.gene76325.t1 AT4G25470 56.061 66 29 0 156 221 51 116 9.57e-18 81.3
MS.gene76325.t1 AT4G31060 45.000 80 42 1 143 220 12 91 9.91e-18 80.5
MS.gene76325.t1 AT4G25480 56.061 66 29 0 156 221 51 116 1.43e-17 80.5
MS.gene76325.t1 AT3G14230 66.234 77 24 1 139 213 109 185 1.44e-17 83.2
MS.gene76325.t1 AT3G14230 66.234 77 24 1 139 213 104 180 1.44e-17 83.2
MS.gene76325.t1 AT3G14230 66.234 77 24 1 139 213 105 181 1.52e-17 83.2
MS.gene76325.t1 AT1G53170 67.692 65 21 0 147 211 22 86 1.81e-17 79.7
MS.gene76325.t1 AT2G40340 62.069 58 22 0 156 213 14 71 3.50e-17 80.9
MS.gene76325.t1 AT2G40340 62.069 58 22 0 156 213 14 71 3.50e-17 80.9
MS.gene76325.t1 AT2G40340 62.069 58 22 0 156 213 14 71 3.50e-17 80.9
MS.gene76325.t1 AT1G53910 44.275 131 65 3 147 272 114 241 3.58e-17 81.6
MS.gene76325.t1 AT1G53910 44.275 131 65 3 147 272 114 241 3.58e-17 81.6
MS.gene76325.t1 AT1G53910 44.275 131 65 3 147 272 112 239 3.95e-17 81.6
MS.gene76325.t1 AT5G51990 56.061 66 29 0 156 221 54 119 4.94e-17 79.3
MS.gene76325.t1 AT1G68550 53.333 75 28 1 128 202 92 159 6.70e-17 80.5
MS.gene76325.t1 AT1G68550 53.333 75 28 1 128 202 92 159 6.70e-17 80.5
MS.gene76325.t1 AT2G40340 62.069 58 22 0 156 213 79 136 9.80e-17 80.5
MS.gene76325.t1 AT2G40340 62.069 58 22 0 156 213 72 129 1.03e-16 79.7
MS.gene76325.t1 AT1G22985 51.351 74 33 1 141 211 60 133 1.04e-16 76.6
MS.gene76325.t1 AT2G40340 62.069 58 22 0 156 213 72 129 1.11e-16 80.1
MS.gene76325.t1 AT1G71130 52.055 73 30 1 144 211 67 139 1.96e-16 76.3
MS.gene76325.t1 AT1G06160 69.841 63 18 1 154 215 80 142 1.94e-15 75.1
MS.gene76325.t1 AT1G04370 72.881 59 15 1 155 212 19 77 2.83e-15 72.0
MS.gene76325.t1 AT1G77200 65.517 58 20 0 156 213 43 100 3.80e-15 74.3
MS.gene76325.t1 AT5G67000 53.333 60 28 0 151 210 116 175 4.50e-15 72.8
MS.gene76325.t1 AT2G40350 56.140 57 25 0 156 212 74 130 5.22e-15 72.0
MS.gene76325.t1 AT2G40350 56.140 57 25 0 156 212 67 123 6.74e-15 71.6
MS.gene76325.t1 AT3G23220 62.319 69 25 1 155 222 13 81 7.36e-15 71.2
MS.gene76325.t1 AT1G22810 47.826 69 34 1 147 213 5 73 8.19e-15 71.2
MS.gene76325.t1 AT5G11190 67.797 59 19 0 154 212 5 63 1.21e-14 71.6
MS.gene76325.t1 AT5G61590 65.079 63 21 1 151 212 102 164 2.01e-14 71.6
MS.gene76325.t1 AT2G40220 69.492 59 18 0 153 211 52 110 2.74e-14 73.2
MS.gene76325.t1 AT1G12610 44.000 75 40 1 156 230 30 102 3.63e-14 70.9
MS.gene76325.t1 AT1G63030 57.143 56 24 0 156 211 30 85 6.42e-14 69.7
MS.gene76325.t1 AT1G63030 57.143 56 24 0 156 211 30 85 6.42e-14 69.7
MS.gene76325.t1 AT1G33760 59.091 66 27 0 156 221 20 85 1.37e-13 68.6
MS.gene76325.t1 AT2G38340 55.072 69 23 1 155 215 69 137 2.43e-13 69.3
MS.gene76325.t1 AT1G71520 55.769 52 22 1 148 198 5 56 1.01e-12 65.1
MS.gene76325.t1 AT3G25730 42.857 84 42 2 134 213 36 117 1.21e-12 68.2
MS.gene76325.t1 AT1G64380 66.129 62 21 0 151 212 131 192 1.64e-12 67.8
MS.gene76325.t1 AT1G68840 56.140 57 23 1 155 211 64 118 3.29e-12 67.0
MS.gene76325.t1 AT1G68840 56.140 57 23 1 155 211 64 118 3.29e-12 67.0
MS.gene76325.t1 AT1G77640 53.731 67 30 1 154 220 41 106 1.03e-11 64.3
MS.gene76325.t1 AT1G49120 57.447 47 20 0 156 202 87 133 2.91e-11 63.9
MS.gene76325.t1 AT1G44830 59.016 61 24 1 154 213 33 93 4.64e-11 62.0
MS.gene76325.t1 AT3G25890 62.222 45 17 0 158 202 133 177 5.10e-11 63.5
MS.gene76325.t1 AT3G25890 62.222 45 17 0 158 202 133 177 5.10e-11 63.5

Find 92 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTATACCCTGAAACTATT+TGG 0.168393 6.3:-30067096 None:intergenic
TGACATGATCAGAGATTATT+TGG 0.175266 6.3:+30068730 MS.gene76325:CDS
CCGGCCACTGCGGTTCCTTC+TGG 0.177068 6.3:+30068677 MS.gene76325:CDS
ACAATTACAAGCTTCTAATT+TGG 0.203255 6.3:+30068814 MS.gene76325:CDS
GACAAAGACCATGGGGAAAA+TGG 0.240432 6.3:+30068456 MS.gene76325:CDS
GATTTCAACCAAATAGTTTC+AGG 0.264413 6.3:+30067088 MS.gene76325:CDS
TTTCCTTTGATATCAAGTTT+TGG 0.342316 6.3:+30067217 MS.gene76325:CDS
CAAATAGTTTCAGGGTATAA+TGG 0.351933 6.3:+30067097 MS.gene76325:CDS
CTTACACATGTTGCATCATC+AGG 0.361680 6.3:+30067151 MS.gene76325:CDS
GGCCATCCGCCACCACCTTA+TGG 0.373170 6.3:+30069106 MS.gene76325:CDS
CACACAAAGCACAAAGAGTA+TGG 0.380832 6.3:+30068498 MS.gene76325:CDS
ATAACTTCATTTCAACCATA+AGG 0.391708 6.3:-30069121 None:intergenic
GTGGCTCATCAAAGAGGTTC+AGG 0.392165 6.3:+30066971 MS.gene76325:CDS
CCTGTATTCTAGTCAACAAA+TGG 0.392454 6.3:+30068994 MS.gene76325:intron
CGACCGCCTGGTGGTGGCCG+TGG 0.396008 6.3:+30069040 MS.gene76325:CDS
AGTACTTGTGCGAGCTTCTT+CGG 0.406529 6.3:-30068357 None:intergenic
CCTGGTGGTGGCCGTGGCGG+TGG 0.420149 6.3:+30069046 MS.gene76325:CDS
GTTCCTTGAACCGGCGGCTG+CGG 0.428180 6.3:-30068704 None:intergenic
ACAAAGACCATGGGGAAAAT+GGG 0.441799 6.3:+30068457 MS.gene76325:CDS
TGATAGAGAGTTATCAGAAA+TGG 0.450311 6.3:+30067120 MS.gene76325:CDS
TGATGCTGCCGAGGTGGCTA+TGG 0.467143 6.3:-30068381 None:intergenic
ATGTCAGAGGTTCCTTGAAC+CGG 0.468559 6.3:-30068713 None:intergenic
ATCAAATGAGTAGTAATGAA+TGG 0.475064 6.3:+30067179 MS.gene76325:CDS
TTCTGGAACACCGCAGCCGC+CGG 0.476144 6.3:+30068694 MS.gene76325:CDS
ACACCGCAGCCGCCGGTTCA+AGG 0.489507 6.3:+30068701 MS.gene76325:CDS
TCTCATATTCTTCAAAGCTC+CGG 0.493428 6.3:+30068758 MS.gene76325:CDS
ATTTCAACCAAATAGTTTCA+GGG 0.496228 6.3:+30067089 MS.gene76325:CDS
CCAGAAGGAACCGCAGTGGC+CGG 0.501824 6.3:-30068677 None:intergenic
AACCATAAGGTGGTGGCGGA+TGG 0.505888 6.3:-30069108 None:intergenic
TTCGCGCTTCACCGTGTACC+CGG 0.508233 6.3:-30067002 None:intergenic
GTATCGTCTCCTTTGCTCGC+CGG 0.510399 6.3:-30068423 None:intergenic
GGTTGTTGTTGTTGCGGTGG+CGG 0.510415 6.3:-30068638 None:intergenic
CTGTATTCTAGTCAACAAAT+GGG 0.516835 6.3:+30068995 MS.gene76325:intron
CCACCGGAAAACCGACCGCC+TGG 0.518276 6.3:+30069028 MS.gene76325:CDS
TTGTTGTAGTTGAAAATCAC+CGG 0.519607 6.3:-30068777 None:intergenic
TGGCGGATGGCCACTAGTAT+CGG 0.519900 6.3:-30069095 None:intergenic
GAAAACCGACCGCCTGGTGG+TGG 0.519939 6.3:+30069034 MS.gene76325:CDS
AGAGGTTCAGGTGAGTTCAC+CGG 0.521062 6.3:+30066983 MS.gene76325:CDS
TTTCCAAAACTTGATATCAA+AGG 0.524581 6.3:-30067220 None:intergenic
GAGGTTCAGGTGAGTTCACC+GGG 0.526875 6.3:+30066984 MS.gene76325:CDS
TACAGCAGAAGCTGCAGCTA+GGG 0.529401 6.3:+30068535 MS.gene76325:CDS
TGTTGTTGTTGCGGTGGCGG+CGG 0.534682 6.3:-30068635 None:intergenic
CATACTCTTTGTGCTTTGTG+TGG 0.535887 6.3:-30068497 None:intergenic
CTTCTAATTTGGTTCAACAA+TGG 0.544625 6.3:+30068825 MS.gene76325:CDS
CGCGGCTGATGCTGCCGAGG+TGG 0.549178 6.3:-30068387 None:intergenic
ATACAGCAGAAGCTGCAGCT+AGG 0.555160 6.3:+30068534 MS.gene76325:CDS
TTTCATGTCCTTGTTAACTG+TGG 0.555811 6.3:+30066952 None:intergenic
CTAGTATCGGACCACGTTGA+CGG 0.561869 6.3:-30069082 None:intergenic
CCACCGCCACGGCCACCACC+AGG 0.563390 6.3:-30069046 None:intergenic
TTTCAACCATAAGGTGGTGG+CGG 0.566909 6.3:-30069112 None:intergenic
GTAGTAATGAATGGATTCAA+AGG 0.570749 6.3:+30067188 MS.gene76325:CDS
TCGAAGACTCCGGCGAGCAA+AGG 0.571694 6.3:+30068414 MS.gene76325:CDS
CACGGCCACCACCAGGCGGT+CGG 0.572034 6.3:-30069039 None:intergenic
GCGCGAAGGCGACGATCACG+AGG 0.572726 6.3:+30067018 MS.gene76325:CDS
TCATTTCAACCATAAGGTGG+TGG 0.573200 6.3:-30069115 None:intergenic
CCGCCTGGTGGTGGCCGTGG+CGG 0.578458 6.3:+30069043 MS.gene76325:CDS
TTGATGAGCCACAGTTAACA+AGG 0.578619 6.3:-30066960 None:intergenic
AGGTGAGTTCACCGGGTACA+CGG 0.593767 6.3:+30066991 MS.gene76325:CDS
GTAACTCTGTTCCACCGCCA+CGG 0.594052 6.3:-30069057 None:intergenic
GGCGACGATCACGAGGGTGG+TGG 0.594335 6.3:+30067025 MS.gene76325:CDS
TTAACTGTGGCTCATCAAAG+AGG 0.595182 6.3:+30066965 MS.gene76325:CDS
AGTTGTGGTTGTTGTTGTTG+CGG 0.600703 6.3:-30068644 None:intergenic
GAAGCTGCATTGAGATTCAG+AGG 0.605746 6.3:+30068566 MS.gene76325:CDS
TGACGCGGCTGATGCTGCCG+AGG 0.608753 6.3:-30068390 None:intergenic
GCCGCGTCATTCGAAGACTC+CGG 0.610822 6.3:+30068404 MS.gene76325:CDS
GGCGGCTGCGGTGTTCCAGA+AGG 0.612164 6.3:-30068692 None:intergenic
AGGAGTAAGACAAAGACCAT+GGG 0.614501 6.3:+30068448 MS.gene76325:CDS
TTGAATTCTGGATCATGGAG+TGG 0.621203 6.3:+30067283 MS.gene76325:CDS
GGGTACACGGTGAAGCGCGA+AGG 0.625154 6.3:+30067004 MS.gene76325:CDS
TCAGAGGTTCCTTGAACCGG+CGG 0.626154 6.3:-30068710 None:intergenic
GAGCAAAGGAGACGATACAG+AGG 0.628908 6.3:+30068428 MS.gene76325:CDS
AATGAATGGATTCAAAGGAG+TGG 0.629391 6.3:+30067193 MS.gene76325:CDS
TTACACATGTTGCATCATCA+GGG 0.634941 6.3:+30067152 MS.gene76325:CDS
ATAATCTCTGATCATGTCAG+AGG 0.635110 6.3:-30068726 None:intergenic
ACTTCATTTCAACCATAAGG+TGG 0.636804 6.3:-30069118 None:intergenic
TGTGGTTGTTGTTGTTGCGG+TGG 0.638920 6.3:-30068641 None:intergenic
GAGGGTGGTGGTAGCGACGA+CGG 0.638935 6.3:+30067037 MS.gene76325:CDS
GAGGAGTAAGACAAAGACCA+TGG 0.642065 6.3:+30068447 MS.gene76325:CDS
AAAGCACAAAGAGTATGGCT+AGG 0.649730 6.3:+30068503 MS.gene76325:CDS
GCCGGAAAAGACTGAAGTTG+TGG 0.654360 6.3:-30068659 None:intergenic
TCAACGTGGTCCGATACTAG+TGG 0.656517 6.3:+30069085 MS.gene76325:CDS
CCGGAAAACCGACCGCCTGG+TGG 0.660096 6.3:+30069031 MS.gene76325:CDS
AAGTACTACCATAGCCACCT+CGG 0.667253 6.3:+30068373 MS.gene76325:CDS
CAGAGTTACCGCCGTCAACG+TGG 0.672351 6.3:+30069071 MS.gene76325:CDS
GAAGGCGACGATCACGAGGG+TGG 0.676129 6.3:+30067022 MS.gene76325:CDS
GGTGGTGGTAGCGACGACGG+TGG 0.679909 6.3:+30067040 MS.gene76325:CDS
CCGCCACGGCCACCACCAGG+CGG 0.718118 6.3:-30069043 None:intergenic
GGAGTAAGACAAAGACCATG+GGG 0.718427 6.3:+30068449 MS.gene76325:CDS
GTATCGGACCACGTTGACGG+CGG 0.718472 6.3:-30069079 None:intergenic
GCCGGAGTCTTCGAATGACG+CGG 0.721042 6.3:-30068405 None:intergenic
CGCGAAGGCGACGATCACGA+GGG 0.725955 6.3:+30067019 MS.gene76325:CDS
TGTTCCAGAAGGAACCGCAG+TGG 0.728758 6.3:-30068681 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTTCTTCAAATTATTAT+TGG + chr6.3:30068207-30068226 MS.gene76325:intron 15.0%
!! ATGGTATTATAATTCACAAA+TGG + chr6.3:30068844-30068863 MS.gene76325:intron 20.0%
!! TGCAACATTATTGTATTATA+AGG - chr6.3:30068067-30068086 None:intergenic 20.0%
!! TGGTTTATTAACAAAAAAGT+TGG - chr6.3:30067794-30067813 None:intergenic 20.0%
!!! ATAATTGATCTAACATTTTC+AGG - chr6.3:30068614-30068633 None:intergenic 20.0%
!!! ATTTTATCTAAAGCCAAAAA+TGG + chr6.3:30067702-30067721 MS.gene76325:intron 20.0%
!!! TAATTGATCTAACATTTTCA+GGG - chr6.3:30068613-30068632 None:intergenic 20.0%
!!! TTGTTTTGATTTAGTTAGAA+TGG - chr6.3:30067975-30067994 None:intergenic 20.0%
! AAATGGTGAACATCATTATT+AGG + chr6.3:30067719-30067738 MS.gene76325:intron 25.0%
! AATGATATGCATAAGATAAG+AGG - chr6.3:30067854-30067873 None:intergenic 25.0%
! ACAATTACAAGCTTCTAATT+TGG + chr6.3:30068814-30068833 MS.gene76325:CDS 25.0%
! ATCAAATGAGTAGTAATGAA+TGG + chr6.3:30067179-30067198 MS.gene76325:CDS 25.0%
! ATTTCAACCAAATAGTTTCA+GGG + chr6.3:30067089-30067108 MS.gene76325:CDS 25.0%
! TTGATTTAGTTAGAATGGAA+GGG - chr6.3:30067970-30067989 None:intergenic 25.0%
! TTTCCAAAACTTGATATCAA+AGG - chr6.3:30067223-30067242 None:intergenic 25.0%
!! ATAATGATGTTCACCATTTT+TGG - chr6.3:30067718-30067737 None:intergenic 25.0%
!! TTTCCTTTGATATCAAGTTT+TGG + chr6.3:30067217-30067236 MS.gene76325:CDS 25.0%
!! TTTGATTTAGTTAGAATGGA+AGG - chr6.3:30067971-30067990 None:intergenic 25.0%
!!! TCTAGTTTTGTTTTGAATTC+TGG + chr6.3:30067271-30067290 MS.gene76325:CDS 25.0%
!!! TTGGCTTTAGATAAAATTGA+GGG - chr6.3:30067699-30067718 None:intergenic 25.0%
!!! TTTGGCTTTAGATAAAATTG+AGG - chr6.3:30067700-30067719 None:intergenic 25.0%
CAAATAGTTTCAGGGTATAA+TGG + chr6.3:30067097-30067116 MS.gene76325:CDS 30.0%
CATTATACCCTGAAACTATT+TGG - chr6.3:30067099-30067118 None:intergenic 30.0%
CTGTATTCTAGTCAACAAAT+GGG + chr6.3:30068995-30069014 MS.gene76325:intron 30.0%
GATTTCAACCAAATAGTTTC+AGG + chr6.3:30067088-30067107 MS.gene76325:CDS 30.0%
TGACATGATCAGAGATTATT+TGG + chr6.3:30068730-30068749 MS.gene76325:CDS 30.0%
TGATACATATTCATTCTGCA+TGG - chr6.3:30067814-30067833 None:intergenic 30.0%
TGATAGAGAGTTATCAGAAA+TGG + chr6.3:30067120-30067139 MS.gene76325:CDS 30.0%
TTGTTGTAGTTGAAAATCAC+CGG - chr6.3:30068780-30068799 None:intergenic 30.0%
! ATTTGTTGACTAGAATACAG+GGG - chr6.3:30068995-30069014 None:intergenic 30.0%
! CATTTGTTGACTAGAATACA+GGG - chr6.3:30068996-30069015 None:intergenic 30.0%
! CTTCTAATTTGGTTCAACAA+TGG + chr6.3:30068825-30068844 MS.gene76325:CDS 30.0%
! GTAGTAATGAATGGATTCAA+AGG + chr6.3:30067188-30067207 MS.gene76325:CDS 30.0%
!! ATAACAGTTCTAAAGAGTCT+AGG - chr6.3:30067379-30067398 None:intergenic 30.0%
!! ATACTTTTGATTAGCAGTGT+CGG - chr6.3:30068133-30068152 None:intergenic 30.0%
!! TAGACTCTTTAGAACTGTTA+TGG + chr6.3:30067378-30067397 MS.gene76325:intron 30.0%
!!! TTGTTTTGAATTCTGGATCA+TGG + chr6.3:30067278-30067297 MS.gene76325:CDS 30.0%
ATAATCTCTGATCATGTCAG+AGG - chr6.3:30068729-30068748 None:intergenic 35.0%
CCTGTATTCTAGTCAACAAA+TGG + chr6.3:30068994-30069013 MS.gene76325:intron 35.0%
GTTTGCACATATTCATCACT+TGG + chr6.3:30067634-30067653 MS.gene76325:intron 35.0%
TAGAACGTAGTTACATGTGT+TGG - chr6.3:30068182-30068201 None:intergenic 35.0%
TCTCATATTCTTCAAAGCTC+CGG + chr6.3:30068758-30068777 MS.gene76325:CDS 35.0%
TTACACATGTTGCATCATCA+GGG + chr6.3:30067152-30067171 MS.gene76325:CDS 35.0%
! AATGAATGGATTCAAAGGAG+TGG + chr6.3:30067193-30067212 MS.gene76325:CDS 35.0%
! CCATTTGTTGACTAGAATAC+AGG - chr6.3:30068997-30069016 None:intergenic 35.0%
! GTCAACAAATGGGATTTTTC+CGG + chr6.3:30069005-30069024 MS.gene76325:intron 35.0%
AATCATCTACGACTGCAGTA+TGG - chr6.3:30067573-30067592 None:intergenic 40.0%
ACAAAGACCATGGGGAAAAT+GGG + chr6.3:30068457-30068476 MS.gene76325:CDS 40.0%
AGGAGTAAGACAAAGACCAT+GGG + chr6.3:30068448-30068467 MS.gene76325:CDS 40.0%
CACACAAAGCACAAAGAGTA+TGG + chr6.3:30068498-30068517 MS.gene76325:CDS 40.0%
CATACTCTTTGTGCTTTGTG+TGG - chr6.3:30068500-30068519 None:intergenic 40.0%
CATGGAGTGGTCAAAAAAGA+GGG + chr6.3:30067296-30067315 MS.gene76325:CDS 40.0%
CTTACACATGTTGCATCATC+AGG + chr6.3:30067151-30067170 MS.gene76325:CDS 40.0%
GGTTTAATGGTTATGCATGG+AGG - chr6.3:30068100-30068119 None:intergenic 40.0%
GTGGGTTTAATGGTTATGCA+TGG - chr6.3:30068103-30068122 None:intergenic 40.0%
TCATGGAGTGGTCAAAAAAG+AGG + chr6.3:30067295-30067314 MS.gene76325:CDS 40.0%
TCCTCACCATCATTATCATC+AGG + chr6.3:30067421-30067440 MS.gene76325:intron 40.0%
TGAGTGGAAGGTGAAAATGA+AGG - chr6.3:30068947-30068966 None:intergenic 40.0%
TTAACTGTGGCTCATCAAAG+AGG + chr6.3:30066965-30066984 MS.gene76325:CDS 40.0%
TTAGTTAGAATGGAAGGGCA+AGG - chr6.3:30067965-30067984 None:intergenic 40.0%
TTGAATTCTGGATCATGGAG+TGG + chr6.3:30067283-30067302 MS.gene76325:CDS 40.0%
TTGATGAGCCACAGTTAACA+AGG - chr6.3:30066963-30066982 None:intergenic 40.0%
! AAAGCACAAAGAGTATGGCT+AGG + chr6.3:30068503-30068522 MS.gene76325:CDS 40.0%
! ACCACAACTTCAGTCTTTTC+CGG + chr6.3:30068658-30068677 MS.gene76325:CDS 40.0%
! ACCTGATGATAATGATGGTG+AGG - chr6.3:30067425-30067444 None:intergenic 40.0%
! AGTGCACCTGATGATAATGA+TGG - chr6.3:30067430-30067449 None:intergenic 40.0%
! AGTTGTGGTTGTTGTTGTTG+CGG - chr6.3:30068647-30068666 None:intergenic 40.0%
! GAGGATGATGATTCTAGAGA+AGG - chr6.3:30067406-30067425 None:intergenic 40.0%
!! ACAGTTCTAAAGAGTCTAGG+AGG - chr6.3:30067376-30067395 None:intergenic 40.0%
!! GGTGAAAATGAAGGTGTTGA+TGG - chr6.3:30068938-30068957 None:intergenic 40.0%
AAGTACTACCATAGCCACCT+CGG + chr6.3:30068373-30068392 MS.gene76325:CDS 45.0%
AGAGGAGGATGAAAGTTGAG+TGG - chr6.3:30068963-30068982 None:intergenic 45.0%
AGTACTTGTGCGAGCTTCTT+CGG - chr6.3:30068360-30068379 None:intergenic 45.0%
ATACAGGGGAAATGAAGCAG+AGG - chr6.3:30068981-30069000 None:intergenic 45.0%
ATGTCAGAGGTTCCTTGAAC+CGG - chr6.3:30068716-30068735 None:intergenic 45.0%
GAAGCTGCATTGAGATTCAG+AGG + chr6.3:30068566-30068585 MS.gene76325:CDS 45.0%
GACAAAGACCATGGGGAAAA+TGG + chr6.3:30068456-30068475 MS.gene76325:CDS 45.0%
GAGGAGTAAGACAAAGACCA+TGG + chr6.3:30068447-30068466 MS.gene76325:CDS 45.0%
GAGGATGAAAGTTGAGTGGA+AGG - chr6.3:30068959-30068978 None:intergenic 45.0%
GCTTCTTCGGTCACTGAAAT+TGG - chr6.3:30068347-30068366 None:intergenic 45.0%
GGAGTAAGACAAAGACCATG+GGG + chr6.3:30068449-30068468 MS.gene76325:CDS 45.0%
TAGAATGGAAGGGCAAGGTA+TGG - chr6.3:30067960-30067979 None:intergenic 45.0%
TGGTTATGCATGGAGGACTA+TGG - chr6.3:30068093-30068112 None:intergenic 45.0%
AGAGGTTCAGGTGAGTTCAC+CGG + chr6.3:30066983-30067002 MS.gene76325:CDS 50.0%
ATACAGCAGAAGCTGCAGCT+AGG + chr6.3:30068534-30068553 MS.gene76325:CDS 50.0%
ATCGTCTACGTCTACGTCTG+CGG + chr6.3:30067477-30067496 MS.gene76325:intron 50.0%
GAGCAAAGGAGACGATACAG+AGG + chr6.3:30068428-30068447 MS.gene76325:CDS 50.0%
GCCGGAAAAGACTGAAGTTG+TGG - chr6.3:30068662-30068681 None:intergenic 50.0%
GGGCGTGATGAAGAAAGTAG+TGG + chr6.3:30067316-30067335 MS.gene76325:intron 50.0%
GTGGCTCATCAAAGAGGTTC+AGG + chr6.3:30066971-30066990 MS.gene76325:CDS 50.0%
TACAGCAGAAGCTGCAGCTA+GGG + chr6.3:30068535-30068554 MS.gene76325:CDS 50.0%
TCAACGTGGTCCGATACTAG+TGG + chr6.3:30069085-30069104 MS.gene76325:CDS 50.0%
! AATGGGATTTTTCCGGCCAC+CGG + chr6.3:30069012-30069031 MS.gene76325:CDS 50.0%
! CGGTGCTAACGTGGGTTTAA+TGG - chr6.3:30068113-30068132 None:intergenic 50.0%
! CTAGTATCGGACCACGTTGA+CGG - chr6.3:30069085-30069104 None:intergenic 50.0%
! TGTGGTTGTTGTTGTTGCGG+TGG - chr6.3:30068644-30068663 None:intergenic 50.0%
AGGTGAGTTCACCGGGTACA+CGG + chr6.3:30066991-30067010 MS.gene76325:CDS 55.0%
CAGGGGAAATGAAGCAGAGG+AGG - chr6.3:30068978-30068997 None:intergenic 55.0%
CTACGTCTACGTCTGCGGTA+TGG + chr6.3:30067482-30067501 MS.gene76325:intron 55.0%
GAGGTTCAGGTGAGTTCACC+GGG + chr6.3:30066984-30067003 MS.gene76325:CDS 55.0%
GCAGACGTAGACGTAGACGA+TGG - chr6.3:30067478-30067497 None:intergenic 55.0%
GTAACTCTGTTCCACCGCCA+CGG - chr6.3:30069060-30069079 None:intergenic 55.0%
GTATCGTCTCCTTTGCTCGC+CGG - chr6.3:30068426-30068445 None:intergenic 55.0%
TCAGAGGTTCCTTGAACCGG+CGG - chr6.3:30068713-30068732 None:intergenic 55.0%
TGTTCCAGAAGGAACCGCAG+TGG - chr6.3:30068684-30068703 None:intergenic 55.0%
! ACGTCTGCGGTATGGTGTCA+TGG + chr6.3:30067490-30067509 MS.gene76325:intron 55.0%
! GGTTGTTGTTGTTGCGGTGG+CGG - chr6.3:30068641-30068660 None:intergenic 55.0%
! TCAGTCTTTTCCGGCCACTG+CGG + chr6.3:30068667-30068686 MS.gene76325:CDS 55.0%
! TCTGCTGCCCATTTTCCCCA+TGG - chr6.3:30068467-30068486 None:intergenic 55.0%
! TGGCGGATGGCCACTAGTAT+CGG - chr6.3:30069098-30069117 None:intergenic 55.0%
!! AACCATAAGGTGGTGGCGGA+TGG - chr6.3:30069111-30069130 None:intergenic 55.0%
!! AGCAGTGTCGGTGCTAACGT+GGG - chr6.3:30068121-30068140 None:intergenic 55.0%
!! TAGCAGTGTCGGTGCTAACG+TGG - chr6.3:30068122-30068141 None:intergenic 55.0%
CAGAGTTACCGCCGTCAACG+TGG + chr6.3:30069071-30069090 MS.gene76325:CDS 60.0%
GCCGCGTCATTCGAAGACTC+CGG + chr6.3:30068404-30068423 MS.gene76325:CDS 60.0%
GCCGGAGTCTTCGAATGACG+CGG - chr6.3:30068408-30068427 None:intergenic 60.0%
GTATCGGACCACGTTGACGG+CGG - chr6.3:30069082-30069101 None:intergenic 60.0%
TCGAAGACTCCGGCGAGCAA+AGG + chr6.3:30068414-30068433 MS.gene76325:CDS 60.0%
TGATGCTGCCGAGGTGGCTA+TGG - chr6.3:30068384-30068403 None:intergenic 60.0%
TTCGCGCTTCACCGTGTACC+CGG - chr6.3:30067005-30067024 None:intergenic 60.0%
! TGTTGTTGTTGCGGTGGCGG+CGG - chr6.3:30068638-30068657 None:intergenic 60.0%
CCAGAAGGAACCGCAGTGGC+CGG - chr6.3:30068680-30068699 None:intergenic 65.0%
CGCGAAGGCGACGATCACGA+GGG + chr6.3:30067019-30067038 MS.gene76325:CDS 65.0%
GAAAACCGACCGCCTGGTGG+TGG + chr6.3:30069034-30069053 MS.gene76325:CDS 65.0%
GAAGGCGACGATCACGAGGG+TGG + chr6.3:30067022-30067041 MS.gene76325:CDS 65.0%
GGCCATCCGCCACCACCTTA+TGG + chr6.3:30069106-30069125 MS.gene76325:CDS 65.0%
GGGTACACGGTGAAGCGCGA+AGG + chr6.3:30067004-30067023 MS.gene76325:CDS 65.0%
GTTCCTTGAACCGGCGGCTG+CGG - chr6.3:30068707-30068726 None:intergenic 65.0%
! GAGGGTGGTGGTAGCGACGA+CGG + chr6.3:30067037-30067056 MS.gene76325:CDS 65.0%
!! CCACCAGGCGGTCGGTTTTC+CGG - chr6.3:30069034-30069053 None:intergenic 65.0%
!! TTCTGGAACACCGCAGCCGC+CGG + chr6.3:30068694-30068713 MS.gene76325:CDS 65.0%
CCACCGGAAAACCGACCGCC+TGG + chr6.3:30069028-30069047 MS.gene76325:CDS 70.0%
CCGGAAAACCGACCGCCTGG+TGG + chr6.3:30069031-30069050 MS.gene76325:CDS 70.0%
CCGGCCACTGCGGTTCCTTC+TGG + chr6.3:30068677-30068696 MS.gene76325:CDS 70.0%
GCGCGAAGGCGACGATCACG+AGG + chr6.3:30067018-30067037 MS.gene76325:CDS 70.0%
GGCGACGATCACGAGGGTGG+TGG + chr6.3:30067025-30067044 MS.gene76325:CDS 70.0%
GGCGGCTGCGGTGTTCCAGA+AGG - chr6.3:30068695-30068714 None:intergenic 70.0%
TGACGCGGCTGATGCTGCCG+AGG - chr6.3:30068393-30068412 None:intergenic 70.0%
! GGTGGTGGTAGCGACGACGG+TGG + chr6.3:30067040-30067059 MS.gene76325:CDS 70.0%
!! ACACCGCAGCCGCCGGTTCA+AGG + chr6.3:30068701-30068720 MS.gene76325:CDS 70.0%
!! CCAGGCGGTCGGTTTTCCGG+TGG - chr6.3:30069031-30069050 None:intergenic 70.0%
!! GCGGTCGGTTTTCCGGTGGC+CGG - chr6.3:30069027-30069046 None:intergenic 70.0%
CACGGCCACCACCAGGCGGT+CGG - chr6.3:30069042-30069061 None:intergenic 75.0%
CGCGGCTGATGCTGCCGAGG+TGG - chr6.3:30068390-30068409 None:intergenic 75.0%
! CCACCGCCACGGCCACCACC+AGG - chr6.3:30069049-30069068 None:intergenic 80.0%
! CCGCCACGGCCACCACCAGG+CGG - chr6.3:30069046-30069065 None:intergenic 80.0%
!!! CCGCCTGGTGGTGGCCGTGG+CGG + chr6.3:30069043-30069062 MS.gene76325:CDS 80.0%
!!! CCTGGTGGTGGCCGTGGCGG+TGG + chr6.3:30069046-30069065 MS.gene76325:CDS 80.0%
!!! CGACCGCCTGGTGGTGGCCG+TGG + chr6.3:30069040-30069059 MS.gene76325:CDS 80.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 30066956 30069132 30066956 ID=MS.gene76325
chr6.3 mRNA 30066956 30069132 30066956 ID=MS.gene76325.t1;Parent=MS.gene76325
chr6.3 exon 30066956 30067331 30066956 ID=MS.gene76325.t1.exon1;Parent=MS.gene76325.t1
chr6.3 CDS 30066956 30067331 30066956 ID=cds.MS.gene76325.t1;Parent=MS.gene76325.t1
chr6.3 exon 30068354 30068846 30068354 ID=MS.gene76325.t1.exon2;Parent=MS.gene76325.t1
chr6.3 CDS 30068354 30068846 30068354 ID=cds.MS.gene76325.t1;Parent=MS.gene76325.t1
chr6.3 exon 30069006 30069132 30069006 ID=MS.gene76325.t1.exon3;Parent=MS.gene76325.t1
chr6.3 CDS 30069006 30069132 30069006 ID=cds.MS.gene76325.t1;Parent=MS.gene76325.t1
Gene Sequence

>MS.gene76325

ATGTCCTTGTTAACTGTGGCTCATCAAAGAGGTTCAGGTGAGTTCACCGGGTACACGGTGAAGCGCGAAGGCGACGATCACGAGGGTGGTGGTAGCGACGACGGTGGAAATTCTAATGCATCACAATCATTAGATTTCAACCAAATAGTTTCAGGGTATAATGGTGATAGAGAGTTATCAGAAATGGTTTCAGCTCTTACACATGTTGCATCATCAGGGTCTAATCAAATGAGTAGTAATGAATGGATTCAAAGGAGTGGTTTTCCTTTGATATCAAGTTTTGGAAATGCTTCATCTTCTTCTTATGCTTCAAGTTCTAGTTTTGTTTTGAATTCTGGATCATGGAGTGGTCAAAAAAGAGGGCGTGATGAAGAAAGTAGTGGTTCTTCTAATCAGCATATAACACAAGCTGTTGTTCCTCCTAGACTCTTTAGAACTGTTATGGTACCTTCTCTAGAATCATCATCCTCACCATCATTATCATCAGGTGCACTTTCTATCTCATACTTTTTCTTAATTCCATCGTCTACGTCTACGTCTGCGGTATGGTGTCATGGTTATGAGAACAGTTAGATTTTATCTCTTAAAATCTAACGATTATCACAGCTACAACACCATACTGCAGTCGTAGATGATTCAACTCATTTTTCATTCATTTTTTGATCACAAATCATTATTGTTTGCACATATTCATCACTTGGTTTATATAAGCTTGATGTTTCAATGTTTTATATTTTGATCCCTCAATTTTATCTAAAGCCAAAAATGGTGAACATCATTATTAGGATTATTTTAAACTTATCTAGCTAATTTTTCTATTTTTGTTAATATAACACCAACTTTTTTGTTAATAAACCATGCAGAATGAATATGTATCAAGTATATTCACTATTCACCTCTTATCTTATGCATATCATTTCTATCTTATACTGCATGCATCAAACATATTTCATTTTTCAATTTTTTTCTTCAATCTAAACATTTTGTCATAAATCATAATTCCATACCTTGCCCTTCCATTCTAACTAAATCAAAACAAACAAAATAATTGTTCTATAAATAACTCAACAATCATTTTGAATTTTACTCATGTCTTTTTTATTAAGCTCCTTATAATACAATAATGTTGCAAGACCATAGTCCTCCATGCATAACCATTAAACCCACGTTAGCACCGACACTGCTAATCAAAAGTATGTCTCGTGTTTGACTCTGAGTTAACACCAACACATGTAACTACGTTCTATTAGTTCATTTCTTCAAATTATTATTGGTGTTGACGTGTCTCTGATTCATTTATTATTACGTAATATTTTGCAAGAAAACTATTGTTTCTACACATTTTCATCAACAAAATATCATAAAACTAATCAAACTATAATCTTTATCCAATTTCAGTGACCGAAGAAGCTCGCACAAGTACTACCATAGCCACCTCGGCAGCATCAGCCGCGTCATTCGAAGACTCCGGCGAGCAAAGGAGACGATACAGAGGAGTAAGACAAAGACCATGGGGAAAATGGGCAGCAGAAATAAGAGATCCACACAAAGCACAAAGAGTATGGCTAGGAACATTTGATACAGCAGAAGCTGCAGCTAGGGCTTATGATGAAGCTGCATTGAGATTCAGAGGAAGCAGAGCAAAACTCAACTTCCCTGAAAATGTTAGATCAATTATGCCGCCGCCACCGCAACAACAACAACCACAACTTCAGTCTTTTCCGGCCACTGCGGTTCCTTCTGGAACACCGCAGCCGCCGGTTCAAGGAACCTCTGACATGATCAGAGATTATTTGGAATATTCTCATATTCTTCAAAGCTCCGGTGATTTTCAACTACAACAAATGCAGCAGCAACAACAATTACAAGCTTCTAATTTGGTTCAACAATGGTATTATAATTCACAAATGGCTGCACTACAATCACATTCATTGTTATCTTCATCATCTTCATCACTTTCTATGAATTCTAATATGTTACCATCAACACCTTCATTTTCACCTTCCACTCAACTTTCATCCTCCTCTGCTTCATTTCCCCTGTATTCTAGTCAACAAATGGGATTTTTCCGGCCACCGGAAAACCGACCGCCTGGTGGTGGCCGTGGCGGTGGAACAGAGTTACCGCCGTCAACGTGGTCCGATACTAGTGGCCATCCGCCACCACCTTATGGTTGA
Protein sequence

>MS.gene76325.t1

MSLLTVAHQRGSGEFTGYTVKREGDDHEGGGSDDGGNSNASQSLDFNQIVSGYNGDRELSEMVSALTHVASSGSNQMSSNEWIQRSGFPLISSFGNASSSSYASSSSFVLNSGSWSGQKRGRDEEMTEEARTSTTIATSAASAASFEDSGEQRRRYRGVRQRPWGKWAAEIRDPHKAQRVWLGTFDTAEAAARAYDEAALRFRGSRAKLNFPENVRSIMPPPPQQQQPQLQSFPATAVPSGTPQPPVQGTSDMIRDYLEYSHILQSSGDFQLQQMQQQQQLQASNLVQQCQQMGFFRPPENRPPGGGRGGGTELPPSTWSDTSGHPPPPYG