Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050926.t1 | XP_003626244.1 | 97.2 | 319 | 9 | 0 | 1 | 319 | 1 | 319 | 2.00E-184 | 654.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050926.t1 | I6YGS0 | 34.2 | 319 | 192 | 6 | 7 | 316 | 7 | 316 | 1.0e-51 | 205.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050926.t1 | A2Q321 | 97.2 | 319 | 9 | 0 | 1 | 319 | 1 | 319 | 1.5e-184 | 654.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050926 | MS.gene052413 | -0.815641 | 8.33E-52 | -1.69E-46 |
| MS.gene050926 | MS.gene054435 | 0.991407 | 1.75E-187 | -1.69E-46 |
| MS.gene050926 | MS.gene054437 | 0.971758 | 1.14E-133 | -1.69E-46 |
| MS.gene050926 | MS.gene054447 | 0.978224 | 2.23E-145 | -1.69E-46 |
| MS.gene050926 | MS.gene056942 | -0.800493 | 1.40E-48 | -1.69E-46 |
| MS.gene050926 | MS.gene063365 | 0.810719 | 1.00E-50 | -1.69E-46 |
| MS.gene050926 | MS.gene064237 | -0.813599 | 2.36E-51 | -1.69E-46 |
| MS.gene050926 | MS.gene069486 | 0.816692 | 4.85E-52 | -1.69E-46 |
| MS.gene050926 | MS.gene072518 | 0.986846 | 3.60E-168 | -1.69E-46 |
| MS.gene050926 | MS.gene073310 | -0.813526 | 2.45E-51 | -1.69E-46 |
| MS.gene050926 | MS.gene07408 | -0.810553 | 1.09E-50 | -1.69E-46 |
| MS.gene050926 | MS.gene074189 | 0.802248 | 6.14E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene07914 | 0.832887 | 7.32E-56 | -1.69E-46 |
| MS.gene050926 | MS.gene08254 | -0.804493 | 2.10E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene29833 | -0.800279 | 1.55E-48 | -1.69E-46 |
| MS.gene050926 | MS.gene32061 | 0.804999 | 1.65E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene37321 | 0.98327 | 2.75E-157 | -1.69E-46 |
| MS.gene050926 | MS.gene40000 | 0.819884 | 9.18E-53 | -1.69E-46 |
| MS.gene050926 | MS.gene40322 | 0.822094 | 2.85E-53 | -1.69E-46 |
| MS.gene050926 | MS.gene40481 | 0.842184 | 3.02E-58 | -1.69E-46 |
| MS.gene050926 | MS.gene40664 | 0.805937 | 1.05E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene44430 | -0.80036 | 1.49E-48 | -1.69E-46 |
| MS.gene050926 | MS.gene45618 | -0.805143 | 1.54E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene45619 | -0.813129 | 2.99E-51 | -1.69E-46 |
| MS.gene050926 | MS.gene45737 | 0.824915 | 6.23E-54 | -1.69E-46 |
| MS.gene050926 | MS.gene54328 | 0.802806 | 4.71E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene57812 | 0.816303 | 5.93E-52 | -1.69E-46 |
| MS.gene050926 | MS.gene59273 | 0.801716 | 7.90E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene60166 | -0.807484 | 4.94E-50 | -1.69E-46 |
| MS.gene050926 | MS.gene62174 | 0.807139 | 5.85E-50 | -1.69E-46 |
| MS.gene050926 | MS.gene63292 | 0.803048 | 4.20E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene70482 | -0.814409 | 1.56E-51 | -1.69E-46 |
| MS.gene050926 | MS.gene75310 | 0.823108 | 1.65E-53 | -1.69E-46 |
| MS.gene050926 | MS.gene76325 | 0.855708 | 5.26E-62 | -1.69E-46 |
| MS.gene050926 | MS.gene79150 | 0.80035 | 1.50E-48 | -1.69E-46 |
| MS.gene050926 | MS.gene80887 | 0.813731 | 2.21E-51 | -1.69E-46 |
| MS.gene050926 | MS.gene82008 | -0.80189 | 7.27E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene85580 | -0.81736 | 3.43E-52 | -1.69E-46 |
| MS.gene050926 | MS.gene86018 | -0.801692 | 7.99E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene90192 | 0.801297 | 9.62E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene91977 | 0.802822 | 4.68E-49 | -1.69E-46 |
| MS.gene050926 | MS.gene96348 | -0.813395 | 2.62E-51 | -1.69E-46 |
| MS.gene050926 | MS.gene97180 | 0.800324 | 1.52E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035371 | MS.gene050926 | PPI |
| MS.gene035367 | MS.gene050926 | PPI |
| MS.gene77823 | MS.gene050926 | PPI |
| MS.gene07001 | MS.gene050926 | PPI |
| MS.gene050926 | MS.gene071500 | PPI |
| MS.gene071504 | MS.gene050926 | PPI |
| MS.gene050926 | MS.gene041604 | PPI |
| MS.gene012063 | MS.gene050926 | PPI |
| MS.gene071502 | MS.gene050926 | PPI |
| MS.gene066360 | MS.gene050926 | PPI |
| MS.gene89620 | MS.gene050926 | PPI |
| MS.gene066361 | MS.gene050926 | PPI |
| MS.gene050926 | MS.gene22955 | PPI |
| MS.gene035369 | MS.gene050926 | PPI |
| MS.gene76453 | MS.gene050926 | PPI |
| MS.gene025707 | MS.gene050926 | PPI |
| MS.gene035373 | MS.gene050926 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050926.t1 | MTR_7g113030 | 97.179 | 319 | 9 | 0 | 1 | 319 | 1 | 319 | 0.0 | 649 |
| MS.gene050926.t1 | MTR_7g113050 | 94.357 | 319 | 18 | 0 | 1 | 319 | 1 | 319 | 0.0 | 633 |
| MS.gene050926.t1 | MTR_7g112615 | 91.850 | 319 | 26 | 0 | 1 | 319 | 1 | 319 | 0.0 | 616 |
| MS.gene050926.t1 | MTR_7g112620 | 86.834 | 319 | 42 | 0 | 1 | 319 | 1 | 319 | 0.0 | 589 |
| MS.gene050926.t1 | MTR_7g113020 | 86.207 | 319 | 44 | 0 | 1 | 319 | 1 | 319 | 0.0 | 587 |
| MS.gene050926.t1 | MTR_7g112960 | 75.862 | 319 | 77 | 0 | 1 | 319 | 1 | 319 | 0.0 | 520 |
| MS.gene050926.t1 | MTR_7g112963 | 76.176 | 319 | 76 | 0 | 1 | 319 | 1 | 319 | 0.0 | 513 |
| MS.gene050926.t1 | MTR_7g112970 | 75.549 | 319 | 75 | 1 | 1 | 319 | 1 | 316 | 0.0 | 511 |
| MS.gene050926.t1 | MTR_4g005160 | 73.684 | 323 | 80 | 3 | 1 | 319 | 1 | 322 | 0.0 | 508 |
| MS.gene050926.t1 | MTR_7g113050 | 93.249 | 237 | 16 | 0 | 1 | 237 | 1 | 237 | 3.23e-169 | 469 |
| MS.gene050926.t1 | MTR_7g112615 | 91.561 | 237 | 20 | 0 | 1 | 237 | 1 | 237 | 4.68e-166 | 461 |
| MS.gene050926.t1 | MTR_7g113010 | 72.242 | 281 | 78 | 0 | 1 | 281 | 1 | 281 | 7.64e-153 | 441 |
| MS.gene050926.t1 | MTR_4g120240 | 61.059 | 321 | 121 | 3 | 1 | 319 | 37 | 355 | 7.11e-145 | 412 |
| MS.gene050926.t1 | MTR_7g108825 | 60.815 | 319 | 123 | 2 | 1 | 319 | 1 | 317 | 8.07e-141 | 400 |
| MS.gene050926.t1 | MTR_8g076680 | 48.297 | 323 | 155 | 4 | 1 | 319 | 3 | 317 | 2.37e-106 | 313 |
| MS.gene050926.t1 | MTR_7g112615 | 90.566 | 159 | 15 | 0 | 1 | 159 | 1 | 159 | 3.48e-106 | 307 |
| MS.gene050926.t1 | MTR_7g108825 | 59.494 | 237 | 94 | 2 | 1 | 237 | 1 | 235 | 5.34e-98 | 289 |
| MS.gene050926.t1 | MTR_7g112910 | 58.635 | 249 | 48 | 5 | 72 | 319 | 1 | 195 | 1.93e-90 | 268 |
| MS.gene050926.t1 | MTR_1g083480 | 78.616 | 159 | 30 | 2 | 1 | 156 | 1 | 158 | 5.74e-90 | 266 |
| MS.gene050926.t1 | MTR_8g076680 | 49.378 | 241 | 112 | 3 | 1 | 237 | 3 | 237 | 3.57e-81 | 246 |
| MS.gene050926.t1 | MTR_2g090240 | 36.760 | 321 | 189 | 6 | 1 | 318 | 1 | 310 | 1.06e-66 | 212 |
| MS.gene050926.t1 | MTR_4g089060 | 36.760 | 321 | 188 | 6 | 1 | 318 | 1 | 309 | 2.03e-65 | 208 |
| MS.gene050926.t1 | MTR_3g024250 | 86.916 | 107 | 14 | 0 | 46 | 152 | 1 | 107 | 3.39e-65 | 202 |
| MS.gene050926.t1 | MTR_2g090245 | 35.826 | 321 | 192 | 7 | 1 | 318 | 1 | 310 | 6.64e-63 | 202 |
| MS.gene050926.t1 | MTR_4g089040 | 36.137 | 321 | 190 | 6 | 1 | 318 | 1 | 309 | 6.76e-63 | 202 |
| MS.gene050926.t1 | MTR_4g089060 | 34.195 | 348 | 187 | 7 | 1 | 318 | 1 | 336 | 2.77e-60 | 196 |
| MS.gene050926.t1 | MTR_4g089060 | 39.056 | 233 | 133 | 3 | 1 | 231 | 1 | 226 | 8.41e-54 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050926.t1 | AT3G05600 | 60.185 | 324 | 124 | 4 | 1 | 319 | 1 | 324 | 2.43e-147 | 417 |
| MS.gene050926.t1 | AT4G02340 | 57.188 | 320 | 132 | 3 | 1 | 319 | 1 | 316 | 5.99e-138 | 394 |
| MS.gene050926.t1 | AT2G26740 | 61.180 | 322 | 118 | 4 | 4 | 319 | 1 | 321 | 8.06e-130 | 373 |
| MS.gene050926.t1 | AT4G15960 | 52.615 | 325 | 147 | 3 | 1 | 319 | 51 | 374 | 1.36e-124 | 362 |
| MS.gene050926.t1 | AT2G26750 | 58.567 | 321 | 127 | 4 | 4 | 319 | 1 | 320 | 2.51e-124 | 359 |
| MS.gene050926.t1 | AT4G15955 | 50.613 | 326 | 123 | 4 | 5 | 319 | 6 | 304 | 9.91e-110 | 321 |
| MS.gene050926.t1 | AT3G05600 | 61.157 | 242 | 89 | 4 | 1 | 237 | 1 | 242 | 6.76e-108 | 314 |
| MS.gene050926.t1 | AT3G51000 | 48.428 | 318 | 159 | 5 | 4 | 319 | 5 | 319 | 3.98e-103 | 305 |
| MS.gene050926.t1 | AT4G15955 | 60.920 | 174 | 58 | 2 | 5 | 168 | 6 | 179 | 8.75e-72 | 220 |
| MS.gene050926.t1 | AT4G15955 | 61.212 | 165 | 54 | 2 | 5 | 159 | 6 | 170 | 1.26e-67 | 209 |
Find 84 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATAAGCTTTGATTCTTTC+AGG | 0.126719 | 7.1:+3506622 | None:intergenic |
| GGCATCAACGGTCCTGATTT+TGG | 0.162298 | 7.1:+3506567 | None:intergenic |
| CCTCTTGTCTTGTTCCTTCA+TGG | 0.187509 | 7.1:-3506892 | MS.gene050926:CDS |
| TTATTACATATGTAGATTTC+AGG | 0.264776 | 7.1:-3506521 | MS.gene050926:intron |
| AAAATGCATATTGCTGAAAA+AGG | 0.266560 | 7.1:-3506925 | MS.gene050926:CDS |
| AACTCTCCCTTGGGAAATAT+TGG | 0.280214 | 7.1:+3505178 | None:intergenic |
| ATATTTCCCAAGGGAGAGTT+TGG | 0.305783 | 7.1:-3505175 | MS.gene050926:CDS |
| CGCCATGAATACCACAGTTC+GGG | 0.324950 | 7.1:+3506865 | None:intergenic |
| CACAGAACAGTGGAAGTAAA+TGG | 0.328559 | 7.1:-3506952 | MS.gene050926:CDS |
| ATTTCTTGTGGCTCATGATT+GGG | 0.336317 | 7.1:-3506680 | MS.gene050926:CDS |
| AGCTGATGGCACCATGGAAT+GGG | 0.338259 | 7.1:-3504682 | MS.gene050926:CDS |
| TATTTCTTGTGGCTCATGAT+TGG | 0.353373 | 7.1:-3506681 | MS.gene050926:CDS |
| GTCTCCAAATTTGAGAAAAC+AGG | 0.355343 | 7.1:-3505082 | MS.gene050926:CDS |
| GATAATCACTTCTTCCAGAT+TGG | 0.362380 | 7.1:+3504550 | None:intergenic |
| CATGATTGGGGTGCCATCAT+TGG | 0.372270 | 7.1:-3506667 | MS.gene050926:CDS |
| GATGCCATGCATGCTGCTTA+TGG | 0.379998 | 7.1:-3506550 | MS.gene050926:CDS |
| ACCCTCACAACTCGGAAAAC+TGG | 0.389484 | 7.1:-3505205 | MS.gene050926:CDS |
| CCCAAGGGAGAGTTTGGAAC+TGG | 0.389949 | 7.1:-3505169 | MS.gene050926:CDS |
| AGCCAAGAGGGTAAGGTGTC+AGG | 0.390169 | 7.1:+3505130 | None:intergenic |
| ATCACAGGAACCAGGCAAAA+TGG | 0.395142 | 7.1:-3505272 | MS.gene050926:intron |
| GCTCCGGATCTCCGTGGTTA+TGG | 0.399328 | 7.1:-3506799 | MS.gene050926:CDS |
| TTACTTGTATTGTAGAAATT+GGG | 0.399713 | 7.1:-3504705 | MS.gene050926:intron |
| TCCCCGAACTGTGGTATTCA+TGG | 0.400391 | 7.1:-3506867 | MS.gene050926:CDS |
| GAAGAAGTGATTATCCAAAA+AGG | 0.403789 | 7.1:-3504542 | MS.gene050926:CDS |
| CTCCTGACACCTTACCCTCT+TGG | 0.407073 | 7.1:-3505132 | MS.gene050926:CDS |
| CATAAGCTTTGATTCTTTCA+GGG | 0.418162 | 7.1:+3506623 | None:intergenic |
| GTGCCTGTGAAATTCATTAC+AGG | 0.432209 | 7.1:-3504647 | MS.gene050926:CDS |
| CAAGGAAGATGTGCCCAATC+TGG | 0.434486 | 7.1:-3504564 | MS.gene050926:CDS |
| TCCGTAGAAACCCCAAAATC+AGG | 0.443771 | 7.1:-3506579 | MS.gene050926:CDS |
| ATAATCACTTCTTCCAGATT+GGG | 0.447163 | 7.1:+3504551 | None:intergenic |
| TCCAGTTCCAAACTCTCCCT+TGG | 0.447351 | 7.1:+3505168 | None:intergenic |
| CGGCTACCGTGCTGTTGCTC+CGG | 0.456232 | 7.1:-3506815 | MS.gene050926:CDS |
| TTCTGTAAGCCAAGAGGGTA+AGG | 0.457253 | 7.1:+3505123 | None:intergenic |
| GAAAATCTATAAGTGCAATA+AGG | 0.461083 | 7.1:+3506719 | None:intergenic |
| GCGCCATGAATACCACAGTT+CGG | 0.461173 | 7.1:+3506864 | None:intergenic |
| GAGCTGATGGCACCATGGAA+TGG | 0.461653 | 7.1:-3504683 | MS.gene050926:CDS |
| TCACCATAACCACGGAGATC+CGG | 0.490155 | 7.1:+3506796 | None:intergenic |
| CCAGTTCCAAACTCTCCCTT+GGG | 0.501905 | 7.1:+3505169 | None:intergenic |
| ACAAAGATACCAACCAATGA+TGG | 0.534758 | 7.1:+3506654 | None:intergenic |
| AGGCAAAATGGAAGCTGAGA+TGG | 0.540634 | 7.1:-3505260 | MS.gene050926:CDS |
| ATGGAATGGGGTGAAAATCA+AGG | 0.540835 | 7.1:-3504669 | MS.gene050926:CDS |
| TTTCTTGTGGCTCATGATTG+GGG | 0.543062 | 7.1:-3506679 | MS.gene050926:CDS |
| TCTCCCTTGGGAAATATTGG+AGG | 0.546141 | 7.1:+3505181 | None:intergenic |
| TTGGGGTTTCTACGGAGTAG+TGG | 0.547389 | 7.1:+3506586 | None:intergenic |
| ATTGTAGCTCTCAGCTCCCT+CGG | 0.548619 | 7.1:-3506835 | MS.gene050926:CDS |
| ATCTCCATAAGCAGCATGCA+TGG | 0.554133 | 7.1:+3506546 | None:intergenic |
| TCTTCTTCTGTAAGCCAAGA+GGG | 0.563661 | 7.1:+3505118 | None:intergenic |
| GAGCAACAGCACGGTAGCCG+AGG | 0.563671 | 7.1:+3506818 | None:intergenic |
| TCACCTGTAATGAATTTCAC+AGG | 0.570947 | 7.1:+3504644 | None:intergenic |
| AGCAACAGCACGGTAGCCGA+GGG | 0.572130 | 7.1:+3506819 | None:intergenic |
| ATTGGGGTGCCATCATTGGT+TGG | 0.574625 | 7.1:-3506663 | MS.gene050926:CDS |
| ACAGTTCGGGGAAGCCATGA+AGG | 0.577839 | 7.1:+3506878 | None:intergenic |
| GAAGGAGTATATCCATGGTG+GGG | 0.578871 | 7.1:-3504591 | MS.gene050926:CDS |
| TGAAGGAGTATATCCATGGT+GGG | 0.583874 | 7.1:-3504592 | MS.gene050926:CDS |
| TGGTCCTCCAATATTTCCCA+AGG | 0.588717 | 7.1:-3505185 | MS.gene050926:CDS |
| GAAGCTGAGATGGCTGAAGT+TGG | 0.590883 | 7.1:-3505250 | MS.gene050926:CDS |
| AGCTGAGAGCTACAATCTGA+TGG | 0.590990 | 7.1:+3506842 | None:intergenic |
| AGCAGCATGCATGGCATCAA+CGG | 0.592010 | 7.1:+3506555 | None:intergenic |
| TGGTCCGCATCACAGGAACC+AGG | 0.594410 | 7.1:-3505280 | MS.gene050926:intron |
| TCTTCAGTTAGTAGCTACAC+AGG | 0.594878 | 7.1:-3506760 | MS.gene050926:CDS |
| AAGGAGTATATCCATGGTGG+GGG | 0.600787 | 7.1:-3504590 | MS.gene050926:CDS |
| TTCATGGCTTCCCCGAACTG+TGG | 0.605850 | 7.1:-3506876 | MS.gene050926:CDS |
| TGTTGATCAAGTATTTCTTG+TGG | 0.608957 | 7.1:-3506692 | MS.gene050926:CDS |
| CAACAATCAAGAAGCAGCAG+AGG | 0.610084 | 7.1:-3504507 | MS.gene050926:CDS |
| ACTAACTGAAGACGGAGCAT+CGG | 0.615174 | 7.1:+3506771 | None:intergenic |
| CCATGAAGGAACAAGACAAG+AGG | 0.618716 | 7.1:+3506892 | None:intergenic |
| TTGTAGAAATTGGGAGCTGA+TGG | 0.619295 | 7.1:-3504696 | MS.gene050926:intron |
| AACATGAAGGAGTATATCCA+TGG | 0.620148 | 7.1:-3504596 | MS.gene050926:CDS |
| ATACTCCTTCATGTTTAGTG+AGG | 0.623538 | 7.1:+3504604 | None:intergenic |
| GCTGATGGCACCATGGAATG+GGG | 0.628565 | 7.1:-3504681 | MS.gene050926:CDS |
| GTTTGGAACTGGATTCAACT+CGG | 0.629425 | 7.1:-3505158 | MS.gene050926:CDS |
| ATTTGGAGACAAAATAAGCA+AGG | 0.634682 | 7.1:+3505095 | None:intergenic |
| ATGAAGGAGTATATCCATGG+TGG | 0.640343 | 7.1:-3504593 | MS.gene050926:CDS |
| TGAAAAGTACCCTCACAACT+CGG | 0.640586 | 7.1:-3505213 | MS.gene050926:CDS |
| ATTGGGAGCTGATGGCACCA+TGG | 0.649732 | 7.1:-3504688 | MS.gene050926:CDS |
| GTCTTCTTCTGTAAGCCAAG+AGG | 0.650739 | 7.1:+3505117 | None:intergenic |
| GTGTAGCTACTAACTGAAGA+CGG | 0.652352 | 7.1:+3506763 | None:intergenic |
| ATACACCTCACTAAACATGA+AGG | 0.662683 | 7.1:-3504609 | MS.gene050926:CDS |
| GGAGATCCGGAGCAACAGCA+CGG | 0.668358 | 7.1:+3506809 | None:intergenic |
| AGGAATAGAACACAGAACAG+TGG | 0.676997 | 7.1:-3506962 | MS.gene050926:CDS |
| GCCATGAATACCACAGTTCG+GGG | 0.692309 | 7.1:+3506866 | None:intergenic |
| GGTCCTCCAATATTTCCCAA+GGG | 0.706108 | 7.1:-3505184 | MS.gene050926:CDS |
| GCTGTTGCTCCGGATCTCCG+TGG | 0.713696 | 7.1:-3506805 | MS.gene050926:CDS |
| CATCGGTGTCACCATAACCA+CGG | 0.714613 | 7.1:+3506788 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATGTGATTTTATTTTAT+AGG | + | chr7.1:3505088-3505107 | None:intergenic | 10.0% |
| !!! | AAATGTGATTTTATTTTATA+GGG | + | chr7.1:3505087-3505106 | None:intergenic | 10.0% |
| !! | AATACTTAATAACTAAATTC+AGG | - | chr7.1:3505334-3505353 | MS.gene050926:intron | 15.0% |
| !! | ATACTTAATAACTAAATTCA+GGG | - | chr7.1:3505335-3505354 | MS.gene050926:intron | 15.0% |
| !! | ATTGTTTAATATAATTAAGG+AGG | - | chr7.1:3505464-3505483 | MS.gene050926:intron | 15.0% |
| !! | CAAAATTCTAAATATTTAGA+TGG | + | chr7.1:3505056-3505075 | None:intergenic | 15.0% |
| !! | GAGATTGTTTAATATAATTA+AGG | - | chr7.1:3505461-3505480 | MS.gene050926:intron | 15.0% |
| !!! | ATGTTGATGAAAAATTTTAT+AGG | + | chr7.1:3505117-3505136 | None:intergenic | 15.0% |
| !!! | TGTTGATGAAAAATTTTATA+GGG | + | chr7.1:3505116-3505135 | None:intergenic | 15.0% |
| !! | AAACTTAATTATATAGATGC+AGG | - | chr7.1:3505304-3505323 | MS.gene050926:intron | 20.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | - | chr7.1:3505275-3505294 | MS.gene050926:intron | 20.0% |
| !! | ATTACTTGTATTGTAGAAAT+TGG | - | chr7.1:3506727-3506746 | MS.gene050926:CDS | 20.0% |
| !! | ATTGATTATTGAATACGTTA+GGG | - | chr7.1:3505888-3505907 | MS.gene050926:intron | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | - | chr7.1:3505276-3505295 | MS.gene050926:intron | 20.0% |
| !! | TCATGAGTCATAAAATATTA+GGG | + | chr7.1:3505005-3505024 | None:intergenic | 20.0% |
| !! | TCTGTTTCAAAACATTATAT+TGG | + | chr7.1:3506065-3506084 | None:intergenic | 20.0% |
| !! | TTACTTGTATTGTAGAAATT+GGG | - | chr7.1:3506728-3506747 | MS.gene050926:CDS | 20.0% |
| !! | TTATTACATATGTAGATTTC+AGG | - | chr7.1:3504912-3504931 | MS.gene050926:intron | 20.0% |
| !! | TTCATGAGTCATAAAATATT+AGG | + | chr7.1:3505006-3505025 | None:intergenic | 20.0% |
| !!! | AAAATATCCATCAACATTTT+TGG | - | chr7.1:3505184-3505203 | MS.gene050926:CDS | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | - | chr7.1:3505244-3505263 | MS.gene050926:CDS | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | - | chr7.1:3505245-3505264 | MS.gene050926:CDS | 20.0% |
| !!! | ACCAATAACAGTTTTAAAAA+TGG | + | chr7.1:3506603-3506622 | None:intergenic | 20.0% |
| !!! | TATATGTTGACAATTCTTTT+TGG | - | chr7.1:3506458-3506477 | MS.gene050926:intron | 20.0% |
| !!! | TATTGATTATTGAATACGTT+AGG | - | chr7.1:3505887-3505906 | MS.gene050926:intron | 20.0% |
| !!! | TCCATTTTTAAAACTGTTAT+TGG | - | chr7.1:3506599-3506618 | MS.gene050926:CDS | 20.0% |
| !!! | TGTTGATGGAAATTTTTTAT+AGG | + | chr7.1:3505148-3505167 | None:intergenic | 20.0% |
| !!! | TTAAAAAAAGCACTTGATTA+AGG | - | chr7.1:3505607-3505626 | MS.gene050926:intron | 20.0% |
| !!! | TTAATCAAGTGCTTTTTTTA+AGG | + | chr7.1:3505608-3505627 | None:intergenic | 20.0% |
| !!! | TTTGTTTATCTAAAATGAAG+TGG | - | chr7.1:3506089-3506108 | MS.gene050926:intron | 20.0% |
| ! | AAAATGCATATTGCTGAAAA+AGG | - | chr7.1:3504508-3504527 | MS.gene050926:CDS | 25.0% |
| ! | AATGCATCTTTCATTAGAAT+TGG | + | chr7.1:3506707-3506726 | None:intergenic | 25.0% |
| ! | ACAAAGACTAAAAATGTTGA+TGG | + | chr7.1:3505162-3505181 | None:intergenic | 25.0% |
| ! | AGAATTGTATGACATCATAA+TGG | - | chr7.1:3505945-3505964 | MS.gene050926:intron | 25.0% |
| ! | ATGATATGTAGCTAAAAGAA+AGG | + | chr7.1:3505998-3506017 | None:intergenic | 25.0% |
| ! | ATGCATCTTTCATTAGAATT+GGG | + | chr7.1:3506706-3506725 | None:intergenic | 25.0% |
| ! | ATTTATTTGAGAGGATTTAC+GGG | - | chr7.1:3505434-3505453 | MS.gene050926:intron | 25.0% |
| ! | GAAAATCTATAAGTGCAATA+AGG | + | chr7.1:3504717-3504736 | None:intergenic | 25.0% |
| ! | GAATTAACTGATCAACTATA+AGG | + | chr7.1:3505805-3505824 | None:intergenic | 25.0% |
| ! | GAATTGTCAACATATATTTG+TGG | + | chr7.1:3506454-3506473 | None:intergenic | 25.0% |
| ! | GATTGCTTAAAGTAAATTAG+GGG | + | chr7.1:3504983-3505002 | None:intergenic | 25.0% |
| ! | GATTTATTTGAGAGGATTTA+CGG | - | chr7.1:3505433-3505452 | MS.gene050926:intron | 25.0% |
| ! | GGATTGCTTAAAGTAAATTA+GGG | + | chr7.1:3504984-3505003 | None:intergenic | 25.0% |
| ! | TACAGGGTTAATTAAGTAAA+TGG | - | chr7.1:3505029-3505048 | MS.gene050926:intron | 25.0% |
| ! | TATGACTCATGAAATATACA+GGG | - | chr7.1:3505013-3505032 | MS.gene050926:intron | 25.0% |
| ! | TCAAATAAATCTATCCAAAC+AGG | + | chr7.1:3505424-3505443 | None:intergenic | 25.0% |
| ! | TGACTCAACTTAATATAGAA+TGG | - | chr7.1:3505837-3505856 | MS.gene050926:intron | 25.0% |
| ! | TGATTGAATATAACATGTGT+CGG | + | chr7.1:3506577-3506596 | None:intergenic | 25.0% |
| ! | TTATGACTCATGAAATATAC+AGG | - | chr7.1:3505012-3505031 | MS.gene050926:intron | 25.0% |
| ! | TTTGGATAGATTTATTTGAG+AGG | - | chr7.1:3505425-3505444 | MS.gene050926:intron | 25.0% |
| !! | ACATTTTCCTTAAGCATTTT+AGG | + | chr7.1:3505212-3505231 | None:intergenic | 25.0% |
| !! | ATTGCACTTATAGATTTTCT+GGG | - | chr7.1:3504718-3504737 | MS.gene050926:intron | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+GGG | + | chr7.1:3505211-3505230 | None:intergenic | 25.0% |
| !! | CTGAATAACATAATTGCTTT+TGG | - | chr7.1:3506133-3506152 | MS.gene050926:intron | 25.0% |
| !! | TATTGCACTTATAGATTTTC+TGG | - | chr7.1:3504717-3504736 | MS.gene050926:intron | 25.0% |
| !!! | TCTTATGATTTTAGTTTGAG+TGG | - | chr7.1:3505363-3505382 | MS.gene050926:intron | 25.0% |
| AATCAAGTGTTAAATCCACT+TGG | + | chr7.1:3505742-3505761 | None:intergenic | 30.0% | |
| AGTAGAGTCTAAATCAAAAG+AGG | - | chr7.1:3505776-3505795 | MS.gene050926:intron | 30.0% | |
| ATAATCACTTCTTCCAGATT+GGG | + | chr7.1:3506885-3506904 | None:intergenic | 30.0% | |
| ATCAAGTGTTAAATCCACTT+GGG | + | chr7.1:3505741-3505760 | None:intergenic | 30.0% | |
| ATTGCTGAAAAAGGAAAAGA+AGG | - | chr7.1:3504517-3504536 | MS.gene050926:CDS | 30.0% | |
| ATTTGGAGACAAAATAAGCA+AGG | + | chr7.1:3506341-3506360 | None:intergenic | 30.0% | |
| CAACATGACAATAATCTATG+CGG | - | chr7.1:3506494-3506513 | MS.gene050926:intron | 30.0% | |
| GAAAAGTGGTAGTAAAGAAA+AGG | + | chr7.1:3504943-3504962 | None:intergenic | 30.0% | |
| GAAGAAGTGATTATCCAAAA+AGG | - | chr7.1:3506891-3506910 | MS.gene050926:CDS | 30.0% | |
| GGGATTGCTTAAAGTAAATT+AGG | + | chr7.1:3504985-3505004 | None:intergenic | 30.0% | |
| TGTTGATCAAGTATTTCTTG+TGG | - | chr7.1:3504741-3504760 | MS.gene050926:intron | 30.0% | |
| ! | ACATAAGCTTTGATTCTTTC+AGG | + | chr7.1:3504814-3504833 | None:intergenic | 30.0% |
| ! | CATAAGCTTTGATTCTTTCA+GGG | + | chr7.1:3504813-3504832 | None:intergenic | 30.0% |
| ! | TACACAGGTTTTCATATAGT+AGG | - | chr7.1:3504688-3504707 | MS.gene050926:CDS | 30.0% |
| ACAAAGATACCAACCAATGA+TGG | + | chr7.1:3504782-3504801 | None:intergenic | 35.0% | |
| ACAACGCTAAACACAAACAT+TGG | + | chr7.1:3506647-3506666 | None:intergenic | 35.0% | |
| AGTGATTATCCAAAAAGGAG+TGG | - | chr7.1:3506896-3506915 | MS.gene050926:CDS | 35.0% | |
| ATACACCTCACTAAACATGA+AGG | - | chr7.1:3506824-3506843 | MS.gene050926:CDS | 35.0% | |
| ATACTCCTTCATGTTTAGTG+AGG | + | chr7.1:3506832-3506851 | None:intergenic | 35.0% | |
| ATGCTTAAGGAAAATGTCAC+AGG | - | chr7.1:3505215-3505234 | MS.gene050926:CDS | 35.0% | |
| ATTTCTTGTGGCTCATGATT+GGG | - | chr7.1:3504753-3504772 | MS.gene050926:intron | 35.0% | |
| CAGAGACAAAAGTAGAAAAG+TGG | + | chr7.1:3504957-3504976 | None:intergenic | 35.0% | |
| GATAATCACTTCTTCCAGAT+TGG | + | chr7.1:3506886-3506905 | None:intergenic | 35.0% | |
| GTCTCCAAATTTGAGAAAAC+AGG | - | chr7.1:3506351-3506370 | MS.gene050926:intron | 35.0% | |
| TATCAACACGTATCAAACAC+CGG | + | chr7.1:3506547-3506566 | None:intergenic | 35.0% | |
| TATTTCTTGTGGCTCATGAT+TGG | - | chr7.1:3504752-3504771 | MS.gene050926:intron | 35.0% | |
| TCACCTGTAATGAATTTCAC+AGG | + | chr7.1:3506792-3506811 | None:intergenic | 35.0% | |
| TCTGAGTAGGGTAATACTTT+AGG | + | chr7.1:3506022-3506041 | None:intergenic | 35.0% | |
| TGCTTAAGGAAAATGTCACA+GGG | - | chr7.1:3505216-3505235 | MS.gene050926:CDS | 35.0% | |
| TTAGGGACCAAAAATGTTGA+TGG | + | chr7.1:3505194-3505213 | None:intergenic | 35.0% | |
| TTTGGTCCCTAAAATGCTTA+AGG | - | chr7.1:3505202-3505221 | MS.gene050926:CDS | 35.0% | |
| ! | AACATGAAGGAGTATATCCA+TGG | - | chr7.1:3506837-3506856 | MS.gene050926:CDS | 35.0% |
| ! | AATATAACATGTGTCGGTGT+CGG | + | chr7.1:3506571-3506590 | None:intergenic | 35.0% |
| ! | GAAGCCTGTTTTCTCAAATT+TGG | + | chr7.1:3506358-3506377 | None:intergenic | 35.0% |
| ! | GCATGTTGTGCATTTTGTTA+GGG | - | chr7.1:3505859-3505878 | MS.gene050926:intron | 35.0% |
| ! | TATTTTCCCTGTGCCAATTT+CGG | + | chr7.1:3505663-3505682 | None:intergenic | 35.0% |
| !! | AGGGTGAAGTTCTCTTATTT+TGG | - | chr7.1:3505907-3505926 | MS.gene050926:intron | 35.0% |
| !!! | GGGTGAAGTTCTCTTATTTT+GGG | - | chr7.1:3505908-3505927 | MS.gene050926:intron | 35.0% |
| AACTCTCCCTTGGGAAATAT+TGG | + | chr7.1:3506258-3506277 | None:intergenic | 40.0% | |
| AGGAATAGAACACAGAACAG+TGG | - | chr7.1:3504471-3504490 | MS.gene050926:CDS | 40.0% | |
| AGTATCTCTCTTAAGGTGAC+AGG | + | chr7.1:3505689-3505708 | None:intergenic | 40.0% | |
| AGTGTTAAATCCACTTGGGA+TGG | + | chr7.1:3505737-3505756 | None:intergenic | 40.0% | |
| AGTTTGAGTGGTGTTTGATG+TGG | - | chr7.1:3505375-3505394 | MS.gene050926:intron | 40.0% | |
| ATATTTCCCAAGGGAGAGTT+TGG | - | chr7.1:3506258-3506277 | MS.gene050926:intron | 40.0% | |
| ATCAACACGTATCAAACACC+GGG | + | chr7.1:3506546-3506565 | None:intergenic | 40.0% | |
| ATGATACTGATACGCCTGTT+TGG | - | chr7.1:3505407-3505426 | MS.gene050926:intron | 40.0% | |
| ATGGAATGGGGTGAAAATCA+AGG | - | chr7.1:3506764-3506783 | MS.gene050926:CDS | 40.0% | |
| CACAGAACAGTGGAAGTAAA+TGG | - | chr7.1:3504481-3504500 | MS.gene050926:CDS | 40.0% | |
| GAGACGATTCAATCTGAGTA+GGG | + | chr7.1:3506034-3506053 | None:intergenic | 40.0% | |
| GTGCCTGTGAAATTCATTAC+AGG | - | chr7.1:3506786-3506805 | MS.gene050926:CDS | 40.0% | |
| GTGTAGCTACTAACTGAAGA+CGG | + | chr7.1:3504673-3504692 | None:intergenic | 40.0% | |
| GTTTGAGTGGTGTTTGATGT+GGG | - | chr7.1:3505376-3505395 | MS.gene050926:intron | 40.0% | |
| TCTTCAGTTAGTAGCTACAC+AGG | - | chr7.1:3504673-3504692 | MS.gene050926:CDS | 40.0% | |
| TCTTCTTCTGTAAGCCAAGA+GGG | + | chr7.1:3506318-3506337 | None:intergenic | 40.0% | |
| TTGTAGAAATTGGGAGCTGA+TGG | - | chr7.1:3506737-3506756 | MS.gene050926:CDS | 40.0% | |
| TTTCTTGTGGCTCATGATTG+GGG | - | chr7.1:3504754-3504773 | MS.gene050926:intron | 40.0% | |
| ! | AGACTGGAGTATCTCTCTTA+AGG | + | chr7.1:3505696-3505715 | None:intergenic | 40.0% |
| ! | ATGAAGGAGTATATCCATGG+TGG | - | chr7.1:3506840-3506859 | MS.gene050926:CDS | 40.0% |
| ! | GGCATGTTGTGCATTTTGTT+AGG | - | chr7.1:3505858-3505877 | MS.gene050926:intron | 40.0% |
| ! | GTTTGGAACTGGATTCAACT+CGG | - | chr7.1:3506275-3506294 | MS.gene050926:intron | 40.0% |
| ! | TGAAGGAGTATATCCATGGT+GGG | - | chr7.1:3506841-3506860 | MS.gene050926:CDS | 40.0% |
| ! | TTGATTTTCACCCCATTCCA+TGG | + | chr7.1:3506765-3506784 | None:intergenic | 40.0% |
| !! | TGAAAAGTACCCTCACAACT+CGG | - | chr7.1:3506220-3506239 | MS.gene050926:intron | 40.0% |
| !!! | TCCTGATTTTGGGGTTTCTA+CGG | + | chr7.1:3504858-3504877 | None:intergenic | 40.0% |
| AAGAGAGATACTCCAGTCTC+AGG | - | chr7.1:3505697-3505716 | MS.gene050926:intron | 45.0% | |
| ACTAACTGAAGACGGAGCAT+CGG | + | chr7.1:3504665-3504684 | None:intergenic | 45.0% | |
| AGCTGAGAGCTACAATCTGA+TGG | + | chr7.1:3504594-3504613 | None:intergenic | 45.0% | |
| AGGCAAAATGGAAGCTGAGA+TGG | - | chr7.1:3506173-3506192 | MS.gene050926:intron | 45.0% | |
| ATCACAGGAACCAGGCAAAA+TGG | - | chr7.1:3506161-3506180 | MS.gene050926:intron | 45.0% | |
| ATCTCCATAAGCAGCATGCA+TGG | + | chr7.1:3504890-3504909 | None:intergenic | 45.0% | |
| CAACAATCAAGAAGCAGCAG+AGG | - | chr7.1:3506926-3506945 | MS.gene050926:CDS | 45.0% | |
| CCATGAAGGAACAAGACAAG+AGG | + | chr7.1:3504544-3504563 | None:intergenic | 45.0% | |
| CGAGACGATTCAATCTGAGT+AGG | + | chr7.1:3506035-3506054 | None:intergenic | 45.0% | |
| GGTCCTCCAATATTTCCCAA+GGG | - | chr7.1:3506249-3506268 | MS.gene050926:intron | 45.0% | |
| GTCTTCTTCTGTAAGCCAAG+AGG | + | chr7.1:3506319-3506338 | None:intergenic | 45.0% | |
| TCCGTAGAAACCCCAAAATC+AGG | - | chr7.1:3504854-3504873 | MS.gene050926:intron | 45.0% | |
| TCGATCTATCCCACCGAAAT+TGG | - | chr7.1:3505647-3505666 | MS.gene050926:intron | 45.0% | |
| TCTCCCTTGGGAAATATTGG+AGG | + | chr7.1:3506255-3506274 | None:intergenic | 45.0% | |
| TGGTCCTCCAATATTTCCCA+AGG | - | chr7.1:3506248-3506267 | MS.gene050926:intron | 45.0% | |
| TTCTGTAAGCCAAGAGGGTA+AGG | + | chr7.1:3506313-3506332 | None:intergenic | 45.0% | |
| TTTCAGTTTGAAGACGTGCC+CGG | - | chr7.1:3506525-3506544 | MS.gene050926:CDS | 45.0% | |
| ! | AAGGAGTATATCCATGGTGG+GGG | - | chr7.1:3506843-3506862 | MS.gene050926:CDS | 45.0% |
| ! | ACCAGTTTTCCGAGTTGTGA+GGG | + | chr7.1:3506232-3506251 | None:intergenic | 45.0% |
| ! | ATCTCAGCTTCCATTTTGCC+TGG | + | chr7.1:3506174-3506193 | None:intergenic | 45.0% |
| ! | CATCAACGGTCCTGATTTTG+GGG | + | chr7.1:3504867-3504886 | None:intergenic | 45.0% |
| ! | CCTCTTGTCTTGTTCCTTCA+TGG | - | chr7.1:3504541-3504560 | MS.gene050926:CDS | 45.0% |
| ! | GAAGGAGTATATCCATGGTG+GGG | - | chr7.1:3506842-3506861 | MS.gene050926:CDS | 45.0% |
| ! | GCATCAACGGTCCTGATTTT+GGG | + | chr7.1:3504868-3504887 | None:intergenic | 45.0% |
| ACCCTCACAACTCGGAAAAC+TGG | - | chr7.1:3506228-3506247 | MS.gene050926:intron | 50.0% | |
| AGCAGCATGCATGGCATCAA+CGG | + | chr7.1:3504881-3504900 | None:intergenic | 50.0% | |
| AGCTGATGGCACCATGGAAT+GGG | - | chr7.1:3506751-3506770 | MS.gene050926:CDS | 50.0% | |
| ATCCCACCGAAATTGGCACA+GGG | - | chr7.1:3505654-3505673 | MS.gene050926:intron | 50.0% | |
| ATTGTAGCTCTCAGCTCCCT+CGG | - | chr7.1:3504598-3504617 | MS.gene050926:CDS | 50.0% | |
| CAAGGAAGATGTGCCCAATC+TGG | - | chr7.1:3506869-3506888 | MS.gene050926:CDS | 50.0% | |
| CCAGTTCCAAACTCTCCCTT+GGG | + | chr7.1:3506267-3506286 | None:intergenic | 50.0% | |
| CGCCATGAATACCACAGTTC+GGG | + | chr7.1:3504571-3504590 | None:intergenic | 50.0% | |
| GAAGCTGAGATGGCTGAAGT+TGG | - | chr7.1:3506183-3506202 | MS.gene050926:intron | 50.0% | |
| GCCATGAATACCACAGTTCG+GGG | + | chr7.1:3504570-3504589 | None:intergenic | 50.0% | |
| GCGCCATGAATACCACAGTT+CGG | + | chr7.1:3504572-3504591 | None:intergenic | 50.0% | |
| TAAATCCACTTGGGATGGCC+TGG | + | chr7.1:3505732-3505751 | None:intergenic | 50.0% | |
| TATCCCACCGAAATTGGCAC+AGG | - | chr7.1:3505653-3505672 | MS.gene050926:intron | 50.0% | |
| TCACCATAACCACGGAGATC+CGG | + | chr7.1:3504640-3504659 | None:intergenic | 50.0% | |
| TCCAGTTCCAAACTCTCCCT+TGG | + | chr7.1:3506268-3506287 | None:intergenic | 50.0% | |
| TCCCCGAACTGTGGTATTCA+TGG | - | chr7.1:3504566-3504585 | MS.gene050926:CDS | 50.0% | |
| TTCCCTGTGCCAATTTCGGT+GGG | + | chr7.1:3505659-3505678 | None:intergenic | 50.0% | |
| TTGGGGTTTCTACGGAGTAG+TGG | + | chr7.1:3504850-3504869 | None:intergenic | 50.0% | |
| TTTCCCTGTGCCAATTTCGG+TGG | + | chr7.1:3505660-3505679 | None:intergenic | 50.0% | |
| TTTGCCTGGTTCCTGTGATG+CGG | + | chr7.1:3506160-3506179 | None:intergenic | 50.0% | |
| ! | ATTGGGGTGCCATCATTGGT+TGG | - | chr7.1:3504770-3504789 | MS.gene050926:intron | 50.0% |
| ! | CATGATTGGGGTGCCATCAT+TGG | - | chr7.1:3504766-3504785 | MS.gene050926:intron | 50.0% |
| ! | GACCAGTTTTCCGAGTTGTG+AGG | + | chr7.1:3506233-3506252 | None:intergenic | 50.0% |
| ! | GATGCCATGCATGCTGCTTA+TGG | - | chr7.1:3504883-3504902 | MS.gene050926:intron | 50.0% |
| ! | GGCATCAACGGTCCTGATTT+TGG | + | chr7.1:3504869-3504888 | None:intergenic | 50.0% |
| ! | TATCCATGGTGGGGGATTCA+AGG | - | chr7.1:3506851-3506870 | MS.gene050926:CDS | 50.0% |
| ! | TGAAGTGCGCCACTCCTTTT+TGG | + | chr7.1:3506908-3506927 | None:intergenic | 50.0% |
| !! | CATCGGTGTCACCATAACCA+CGG | + | chr7.1:3504648-3504667 | None:intergenic | 50.0% |
| !! | TTGCTTTTGGTCCGCATCAC+AGG | - | chr7.1:3506146-3506165 | MS.gene050926:intron | 50.0% |
| ACAGTTCGGGGAAGCCATGA+AGG | + | chr7.1:3504558-3504577 | None:intergenic | 55.0% | |
| ATTGGGAGCTGATGGCACCA+TGG | - | chr7.1:3506745-3506764 | MS.gene050926:CDS | 55.0% | |
| CTCCTGACACCTTACCCTCT+TGG | - | chr7.1:3506301-3506320 | MS.gene050926:intron | 55.0% | |
| CTTCCTTGAATCCCCCACCA+TGG | + | chr7.1:3506857-3506876 | None:intergenic | 55.0% | |
| GAGCTGATGGCACCATGGAA+TGG | - | chr7.1:3506750-3506769 | MS.gene050926:CDS | 55.0% | |
| GCTGATGGCACCATGGAATG+GGG | - | chr7.1:3506752-3506771 | MS.gene050926:CDS | 55.0% | |
| TTCATGGCTTCCCCGAACTG+TGG | - | chr7.1:3504557-3504576 | MS.gene050926:CDS | 55.0% | |
| ! | AGCCAAGAGGGTAAGGTGTC+AGG | + | chr7.1:3506306-3506325 | None:intergenic | 55.0% |
| ! | CCCAAGGGAGAGTTTGGAAC+TGG | - | chr7.1:3506264-3506283 | MS.gene050926:intron | 55.0% |
| AGCAACAGCACGGTAGCCGA+GGG | + | chr7.1:3504617-3504636 | None:intergenic | 60.0% | |
| AGTCTCAGGACACCACCACC+AGG | - | chr7.1:3505711-3505730 | MS.gene050926:intron | 60.0% | |
| ATCCACTTGGGATGGCCTGG+TGG | + | chr7.1:3505729-3505748 | None:intergenic | 60.0% | |
| GCTCCGGATCTCCGTGGTTA+TGG | - | chr7.1:3504634-3504653 | MS.gene050926:CDS | 60.0% | |
| GGAGATCCGGAGCAACAGCA+CGG | + | chr7.1:3504627-3504646 | None:intergenic | 60.0% | |
| TGGTCCGCATCACAGGAACC+AGG | - | chr7.1:3506153-3506172 | MS.gene050926:intron | 60.0% | |
| !! | TGGTGGTGGTGTCCTGAGAC+TGG | + | chr7.1:3505712-3505731 | None:intergenic | 60.0% |
| CACCACCAGGCCATCCCAAG+TGG | - | chr7.1:3505724-3505743 | MS.gene050926:intron | 65.0% | |
| CACTTGGGATGGCCTGGTGG+TGG | + | chr7.1:3505726-3505745 | None:intergenic | 65.0% | |
| GAGCAACAGCACGGTAGCCG+AGG | + | chr7.1:3504618-3504637 | None:intergenic | 65.0% | |
| GCTGTTGCTCCGGATCTCCG+TGG | - | chr7.1:3504628-3504647 | MS.gene050926:CDS | 65.0% | |
| ! | CGGCTACCGTGCTGTTGCTC+CGG | - | chr7.1:3504618-3504637 | MS.gene050926:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3504466 | 3506989 | 3504466 | ID=MS.gene050926 |
| chr7.1 | mRNA | 3504466 | 3506989 | 3504466 | ID=MS.gene050926.t1;Parent=MS.gene050926 |
| chr7.1 | exon | 3506522 | 3506989 | 3506522 | ID=MS.gene050926.t1.exon1;Parent=MS.gene050926.t1 |
| chr7.1 | CDS | 3506522 | 3506989 | 3506522 | ID=cds.MS.gene050926.t1;Parent=MS.gene050926.t1 |
| chr7.1 | exon | 3505043 | 3505287 | 3505043 | ID=MS.gene050926.t1.exon2;Parent=MS.gene050926.t1 |
| chr7.1 | CDS | 3505043 | 3505287 | 3505043 | ID=cds.MS.gene050926.t1;Parent=MS.gene050926.t1 |
| chr7.1 | exon | 3504466 | 3504712 | 3504466 | ID=MS.gene050926.t1.exon3;Parent=MS.gene050926.t1 |
| chr7.1 | CDS | 3504466 | 3504712 | 3504466 | ID=cds.MS.gene050926.t1;Parent=MS.gene050926.t1 |
| Gene Sequence |
| Protein sequence |
