Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76545.t1 | XP_003597674.1 | 96.5 | 1140 | 40 | 0 | 1 | 1140 | 1 | 1140 | 0.00E+00 | 2127.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76545.t1 | Q0WVF8 | 45.5 | 1153 | 592 | 11 | 1 | 1138 | 2 | 1133 | 6.0e-272 | 938.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76545.t1 | G7IHZ6 | 96.5 | 1140 | 40 | 0 | 1 | 1140 | 1 | 1140 | 0.0e+00 | 2127.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073095 | MS.gene76545 | PPI |
| MS.gene94650 | MS.gene76545 | PPI |
| MS.gene76545 | MS.gene91488 | PPI |
| MS.gene35361 | MS.gene76545 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76545.t1 | MTR_2g100870 | 96.491 | 1140 | 40 | 0 | 1 | 1140 | 1 | 1140 | 0.0 | 2257 |
| MS.gene76545.t1 | MTR_5g085950 | 85.965 | 1140 | 159 | 1 | 1 | 1140 | 1 | 1139 | 0.0 | 1940 |
| MS.gene76545.t1 | MTR_5g055460 | 83.333 | 48 | 8 | 0 | 175 | 222 | 17 | 64 | 1.48e-19 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76545.t1 | AT5G48120 | 45.447 | 1153 | 593 | 11 | 1 | 1138 | 2 | 1133 | 0.0 | 947 |
| MS.gene76545.t1 | AT5G48120 | 45.447 | 1153 | 593 | 11 | 1 | 1138 | 2 | 1133 | 0.0 | 947 |
| MS.gene76545.t1 | AT5G48120 | 45.447 | 1153 | 593 | 11 | 1 | 1138 | 2 | 1133 | 0.0 | 947 |
Find 210 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAAGAATGATGGATAAAT+TGG | 0.076592 | 2.3:-2930581 | MS.gene76545:CDS |
| AGACACTTTATATACTTATT+TGG | 0.080986 | 2.3:-2930905 | MS.gene76545:CDS |
| TGCAGAAGCCCTCTTATATT+TGG | 0.180661 | 2.3:+2928159 | None:intergenic |
| ATATTCTCAAATGTTGATTT+TGG | 0.185446 | 2.3:+2929473 | None:intergenic |
| TGCAATTTGCTGTGGATATT+TGG | 0.195724 | 2.3:-2928605 | MS.gene76545:CDS |
| CATGAGACGTTAAATTTCTT+TGG | 0.197723 | 2.3:+2928911 | None:intergenic |
| TCAATTATCATAGAAGATTT+TGG | 0.200733 | 2.3:-2929434 | MS.gene76545:CDS |
| TGAAACTGCTGTTCAGCTTT+TGG | 0.210397 | 2.3:-2928890 | MS.gene76545:CDS |
| GACACTTTATATACTTATTT+GGG | 0.214061 | 2.3:-2930904 | MS.gene76545:CDS |
| TCAACTACAACTTCGTTCTT+TGG | 0.238088 | 2.3:+2930832 | None:intergenic |
| CTTGCAAAATGGCGGTATTT+TGG | 0.239622 | 2.3:-2930533 | MS.gene76545:CDS |
| GCTTCTACTTTGAGTGAAAA+AGG | 0.246531 | 2.3:+2929260 | None:intergenic |
| TATACTGAATGAAGCTAAAA+AGG | 0.249796 | 2.3:-2927181 | MS.gene76545:intron |
| TATATTTGGAATGTGTGTTT+TGG | 0.263185 | 2.3:+2928173 | None:intergenic |
| TTATATTCAACACAAAATTA+TGG | 0.275586 | 2.3:-2928002 | MS.gene76545:CDS |
| CAAAATATACTGGGGCTATT+TGG | 0.280307 | 2.3:-2930939 | MS.gene76545:CDS |
| TGTTCCAGTTGCACAGGCTT+TGG | 0.282641 | 2.3:-2928106 | MS.gene76545:CDS |
| GCTGTCTTATTTAATGCCTT+TGG | 0.286607 | 2.3:-2930385 | MS.gene76545:CDS |
| TACACAGACCTCGGATAAAT+TGG | 0.288390 | 2.3:+2929163 | None:intergenic |
| GTTCCAGTTGCACAGGCTTT+GGG | 0.289048 | 2.3:-2928105 | MS.gene76545:CDS |
| CACTTGCAGGTTCAATCTTT+AGG | 0.305593 | 2.3:-2934362 | MS.gene76545:CDS |
| GCAGCTCATACCAGTTCTTC+TGG | 0.317367 | 2.3:-2927058 | MS.gene76545:intron |
| AAAGCAAGCATTAAACATTC+TGG | 0.318254 | 2.3:+2932914 | None:intergenic |
| TTGAAAGCATTATTTCATAT+TGG | 0.321286 | 2.3:-2929386 | MS.gene76545:CDS |
| AACATTGATGGCTTGCAAAA+TGG | 0.325223 | 2.3:-2930544 | MS.gene76545:CDS |
| GAGAGAATCGCAAAATATAC+TGG | 0.334038 | 2.3:-2930949 | MS.gene76545:CDS |
| GCCTCACAAAGTGTTAATTT+CGG | 0.341373 | 2.3:-2930511 | MS.gene76545:CDS |
| GAGCCCAAAGCCTGTGCAAC+TGG | 0.345968 | 2.3:+2928102 | None:intergenic |
| TTCTTCAGGAATTCTTCTTC+TGG | 0.346745 | 2.3:-2935109 | MS.gene76545:intron |
| TGCCGATTCAATTGCCTCAT+TGG | 0.354326 | 2.3:-2933914 | MS.gene76545:intron |
| CATACAAGATATCTTTATCT+TGG | 0.362497 | 2.3:+2927007 | None:intergenic |
| AAAAGTACCCCTTCATCCTT+AGG | 0.362568 | 2.3:+2928228 | None:intergenic |
| GTTGCAAGCTTGGATGCAAT+TGG | 0.372632 | 2.3:-2935975 | MS.gene76545:CDS |
| TCACCTCCAATGTATATATC+AGG | 0.379956 | 2.3:+2930322 | None:intergenic |
| ACTTTGGAACACAGCATTGC+AGG | 0.382832 | 2.3:+2930609 | None:intergenic |
| ACTTCCGTGCCTTTAGTTGA+AGG | 0.385121 | 2.3:-2927757 | MS.gene76545:CDS |
| ATGGGCAGGATCCTTGAAAA+TGG | 0.386884 | 2.3:-2928648 | MS.gene76545:intron |
| ATCTTTATCTTGGATATCTT+CGG | 0.387694 | 2.3:+2927017 | None:intergenic |
| AAAAGATTGAGTAATGGATT+TGG | 0.388568 | 2.3:+2934391 | None:intergenic |
| GATTCTCTCTGCTCCATACT+TGG | 0.393299 | 2.3:+2930963 | None:intergenic |
| TGTCTTCACATACCAAGTTT+CGG | 0.397127 | 2.3:-2928302 | MS.gene76545:CDS |
| ATGCCATTTGTGGGCTCTCA+TGG | 0.397432 | 2.3:-2927870 | MS.gene76545:CDS |
| AGAGTGTGCTCCTCCAAGTA+TGG | 0.397798 | 2.3:-2930976 | MS.gene76545:CDS |
| GGAAGATTGACATTAACTTC+TGG | 0.399199 | 2.3:-2928267 | MS.gene76545:CDS |
| GTAGTTCTATACAGAGATAA+AGG | 0.401655 | 2.3:+2930485 | None:intergenic |
| TCTAATAATATGTTACAGAT+AGG | 0.403816 | 2.3:-2927973 | MS.gene76545:CDS |
| CTTCAAACCAATGCCATTTG+TGG | 0.407593 | 2.3:-2927880 | MS.gene76545:CDS |
| TAATTCTCCATTTGAGGAAA+AGG | 0.410569 | 2.3:-2928556 | MS.gene76545:intron |
| AGTGTTGTGGGTACGGTAAC+GGG | 0.413671 | 2.3:-2934422 | MS.gene76545:CDS |
| GAAGTACTGACCATGCTTGC+CGG | 0.413682 | 2.3:+2925716 | None:intergenic |
| TTAAGAATGATGGATAAATT+GGG | 0.416904 | 2.3:-2930580 | MS.gene76545:CDS |
| GTTCTTACTGATTTATGTCT+CGG | 0.417407 | 2.3:-2927922 | MS.gene76545:CDS |
| AGCTGAGGAACTATGAAGTA+TGG | 0.418824 | 2.3:+2930405 | None:intergenic |
| ACTCTCAGGATGCAGGGAAT+TGG | 0.421940 | 2.3:-2930464 | MS.gene76545:CDS |
| TCAAGTGAGCCTTCAACTAA+AGG | 0.422165 | 2.3:+2927748 | None:intergenic |
| AATCCATGCAATTTCCTGCT+TGG | 0.428610 | 2.3:+2928580 | None:intergenic |
| AAGAAGAAAGTTTCTGAAGA+AGG | 0.429146 | 2.3:+2931166 | None:intergenic |
| ACACACATTCCAAATATAAG+AGG | 0.429195 | 2.3:-2928168 | MS.gene76545:CDS |
| GTAGAAGCATTATATGATAT+CGG | 0.429218 | 2.3:-2929245 | MS.gene76545:CDS |
| AAGAAGAAACTACATGCTAT+TGG | 0.431368 | 2.3:-2930670 | MS.gene76545:CDS |
| GCACAATAAGCTGCTGAAGC+AGG | 0.431485 | 2.3:+2930800 | None:intergenic |
| AAGTCTGATACCGTCTTATG+AGG | 0.431679 | 2.3:+2926453 | None:intergenic |
| GACAAGCAATCCAGAAGAAC+TGG | 0.432210 | 2.3:+2927048 | None:intergenic |
| TTGGTTGCTTGGCACTGATA+AGG | 0.433268 | 2.3:-2934451 | MS.gene76545:CDS |
| AGGTGCACTCGTTGGTTGCT+TGG | 0.434186 | 2.3:-2934462 | MS.gene76545:CDS |
| TAGCTTGGTTGGGTTCTTCA+AGG | 0.437441 | 2.3:-2935034 | MS.gene76545:CDS |
| TGTATTGCAGGTTGCAAGCT+TGG | 0.439105 | 2.3:-2935985 | MS.gene76545:intron |
| GATCTGATTCTTTATTGTCC+AGG | 0.441249 | 2.3:-2927546 | MS.gene76545:intron |
| TACATCATTAAGCCGAAACT+TGG | 0.442667 | 2.3:+2928290 | None:intergenic |
| TGGCATTCCATAGTACTGTT+TGG | 0.446947 | 2.3:+2929411 | None:intergenic |
| TTCAAACCAATGCCATTTGT+GGG | 0.447068 | 2.3:-2927879 | MS.gene76545:CDS |
| ATCAGACTTCTCTGCACCAT+TGG | 0.447336 | 2.3:+2928053 | None:intergenic |
| AGGAATTCTTCTTCTGGCAG+AGG | 0.451191 | 2.3:-2935103 | MS.gene76545:CDS |
| AAAACTATACATAGCTTGGT+TGG | 0.451872 | 2.3:-2935045 | MS.gene76545:CDS |
| GGGTGTTGTTCCAGTTGCAC+AGG | 0.458087 | 2.3:-2928112 | MS.gene76545:CDS |
| AATCTTTAGGACTGCATGAC+AGG | 0.461991 | 2.3:-2934349 | MS.gene76545:CDS |
| AAAGTACCCCTTCATCCTTA+GGG | 0.462262 | 2.3:+2928229 | None:intergenic |
| TAGGTAATGGATCAAGTAAT+GGG | 0.464527 | 2.3:-2927954 | MS.gene76545:CDS |
| CAAGATAAAGATATCTTGTA+TGG | 0.465086 | 2.3:-2927006 | MS.gene76545:CDS |
| TGAGATCAATTGCAGAAAGA+TGG | 0.467104 | 2.3:+2927570 | None:intergenic |
| GCTAGAGTAAAAGAGAAATC+TGG | 0.469250 | 2.3:+2930877 | None:intergenic |
| CGATTATATCCTGATCCATC+TGG | 0.470202 | 2.3:-2932869 | MS.gene76545:CDS |
| TAGAACTACTCTCAGGATGC+AGG | 0.472025 | 2.3:-2930471 | MS.gene76545:CDS |
| GGGCTCTCATGGATTGGAAA+AGG | 0.473984 | 2.3:-2927859 | MS.gene76545:CDS |
| TGGGAGTGAACCTGGTGAGA+TGG | 0.474738 | 2.3:+2936067 | None:intergenic |
| TTGCAAGCTTGGATGCAATT+GGG | 0.475056 | 2.3:-2935974 | MS.gene76545:CDS |
| CACAGCATTGCAGGAAGGAA+TGG | 0.475150 | 2.3:+2930618 | None:intergenic |
| CTTACATGTGTAAAGTGAAT+CGG | 0.477840 | 2.3:+2932794 | None:intergenic |
| ATTTGTGGGCTCTCATGGAT+TGG | 0.477974 | 2.3:-2927865 | MS.gene76545:CDS |
| TTATTTATAATCAGGCAGAT+TGG | 0.478009 | 2.3:-2934496 | MS.gene76545:intron |
| GCACACTCTAAGATATTGTA+AGG | 0.481622 | 2.3:+2930990 | None:intergenic |
| AAACTATACATAGCTTGGTT+GGG | 0.482444 | 2.3:-2935044 | MS.gene76545:CDS |
| GTAAAGTGAATCGGAAAGTA+AGG | 0.484365 | 2.3:+2932803 | None:intergenic |
| AATGCACATATTATCATCAA+TGG | 0.492111 | 2.3:-2926498 | MS.gene76545:CDS |
| TGGGTTCTTCAAGGAAAGAA+TGG | 0.495618 | 2.3:-2935025 | MS.gene76545:intron |
| AAAATTCAGCGAGTCTGAAA+AGG | 0.497418 | 2.3:-2929351 | MS.gene76545:CDS |
| GACATTTCCCCTAAGGATGA+AGG | 0.497426 | 2.3:-2928237 | MS.gene76545:CDS |
| CTCATAAGATGCAATGCTGT+TGG | 0.497867 | 2.3:+2930720 | None:intergenic |
| GAGGAAAAGTGTTGTGGGTA+CGG | 0.500931 | 2.3:-2934429 | MS.gene76545:CDS |
| AATATGTTACAGATAGGTAA+TGG | 0.501229 | 2.3:-2927967 | MS.gene76545:CDS |
| TACCAATGAGGCAATTGAAT+CGG | 0.502183 | 2.3:+2933912 | None:intergenic |
| TGAAATTTAGGTTAGAGAGT+TGG | 0.502230 | 2.3:-2935792 | MS.gene76545:intron |
| AAGTTTCGGCTTAATGATGT+AGG | 0.505463 | 2.3:-2928288 | MS.gene76545:CDS |
| CACAATAAGCTGCTGAAGCA+GGG | 0.507341 | 2.3:+2930801 | None:intergenic |
| AAGTGTTGTGGGTACGGTAA+CGG | 0.511090 | 2.3:-2934423 | MS.gene76545:CDS |
| AGAGCAGAAATGTGATCCTC+TGG | 0.513326 | 2.3:-2927716 | MS.gene76545:CDS |
| GCAGGAAGGAATGGAAGTCT+TGG | 0.514261 | 2.3:+2930627 | None:intergenic |
| TGGAAAGTTAATACCATCTG+TGG | 0.516141 | 2.3:+2930852 | None:intergenic |
| GCAAGTAGACCAGATGGATC+AGG | 0.516624 | 2.3:+2932860 | None:intergenic |
| TTGCAGAAAGATGGGCATCA+TGG | 0.520421 | 2.3:+2927579 | None:intergenic |
| CTGTCAAATGCCGGCAAGCA+TGG | 0.520628 | 2.3:-2925726 | MS.gene76545:intron |
| CTCTTCAACTCCATCTCACC+AGG | 0.521795 | 2.3:-2936077 | MS.gene76545:intron |
| TCTGATCCTGATATATACAT+TGG | 0.522783 | 2.3:-2930328 | MS.gene76545:CDS |
| GAAAGTTTCTGAAGAAGGAG+AGG | 0.523072 | 2.3:+2931171 | None:intergenic |
| TGAGAGCCCACAAATGGCAT+TGG | 0.529030 | 2.3:+2927873 | None:intergenic |
| AGAAGGAGAGGAATGACAAA+TGG | 0.529592 | 2.3:+2931183 | None:intergenic |
| GAAGTCTGATGAACTTACCT+TGG | 0.531629 | 2.3:-2928040 | MS.gene76545:CDS |
| AATCCATGAGAGCCCACAAA+TGG | 0.532104 | 2.3:+2927867 | None:intergenic |
| GCTTACAATTCTTCAAGCGA+TGG | 0.534202 | 2.3:-2929201 | MS.gene76545:CDS |
| TTATATGATATCGGCATGAC+CGG | 0.534310 | 2.3:-2929236 | MS.gene76545:CDS |
| GAGATCAATTGCAGAAAGAT+GGG | 0.536252 | 2.3:+2927571 | None:intergenic |
| TTTAATAATAACCCTCCTCA+AGG | 0.537659 | 2.3:-2928133 | MS.gene76545:CDS |
| GGGCATCGATTGCCTCATCT+AGG | 0.541580 | 2.3:-2925605 | MS.gene76545:CDS |
| ATAGGTAATGGATCAAGTAA+TGG | 0.542296 | 2.3:-2927955 | MS.gene76545:CDS |
| AAAATATGACATTTCCCCTA+AGG | 0.543815 | 2.3:-2928244 | MS.gene76545:CDS |
| ACATTTCCCCTAAGGATGAA+GGG | 0.544414 | 2.3:-2928236 | MS.gene76545:CDS |
| CTCTGTATAGAACTACTCTC+AGG | 0.544666 | 2.3:-2930478 | MS.gene76545:CDS |
| GAACCAAGCAGGAAATTGCA+TGG | 0.546490 | 2.3:-2928583 | MS.gene76545:CDS |
| ATAAGGAGGAAAAGTGTTGT+GGG | 0.547829 | 2.3:-2934434 | MS.gene76545:CDS |
| TCTCTCTGCTCCATACTTGG+AGG | 0.547967 | 2.3:+2930966 | None:intergenic |
| GTACCATCAGAGTCCTTGAT+AGG | 0.548690 | 2.3:+2932425 | None:intergenic |
| GTGGATATTTGGAACCAAGC+AGG | 0.552500 | 2.3:-2928594 | MS.gene76545:CDS |
| GCAATGAAGCTGTCAAATGC+CGG | 0.553254 | 2.3:-2925735 | MS.gene76545:CDS |
| TGGAGGTGCAGAGGATTTCG+TGG | 0.554978 | 2.3:-2928628 | MS.gene76545:CDS |
| AGAGAATCGCAAAATATACT+GGG | 0.556242 | 2.3:-2930948 | MS.gene76545:CDS |
| ATTCTTGCAAGCTACTTCCA+TGG | 0.557389 | 2.3:-2928861 | MS.gene76545:intron |
| GATCCTGATATATACATTGG+AGG | 0.557628 | 2.3:-2930325 | MS.gene76545:intron |
| TGCAACGAGATGACCTATCA+AGG | 0.557982 | 2.3:-2932438 | MS.gene76545:CDS |
| GATACAGTTATTCGATCAAG+AGG | 0.561676 | 2.3:-2935749 | MS.gene76545:intron |
| AATCGGCATGATGTTCTAGC+AGG | 0.561685 | 2.3:+2933929 | None:intergenic |
| TTCTTCACTACATTCAGCAA+AGG | 0.562396 | 2.3:-2931148 | MS.gene76545:intron |
| GAAAATTTCATGCCACAGTA+CGG | 0.562746 | 2.3:-2927630 | MS.gene76545:CDS |
| TTGTAGAAAAGATTGAGTAA+TGG | 0.565621 | 2.3:+2934385 | None:intergenic |
| GATAAGGAGGAAAAGTGTTG+TGG | 0.565850 | 2.3:-2934435 | MS.gene76545:CDS |
| ATGTATATATCAGGATCAGA+GGG | 0.568346 | 2.3:+2930331 | None:intergenic |
| TAGCTTGATAATTGATGATG+TGG | 0.569964 | 2.3:-2930758 | MS.gene76545:CDS |
| TGCTTCTAGAGTTAAAGCAT+TGG | 0.570514 | 2.3:+2935938 | None:intergenic |
| AAAGCGATGAAAGTTTCTGT+TGG | 0.571764 | 2.3:-2928378 | MS.gene76545:CDS |
| ACAATTCTTCAAGCGATGGA+AGG | 0.572459 | 2.3:-2929197 | MS.gene76545:CDS |
| GCAGTACGAGGTGCACTCGT+TGG | 0.573247 | 2.3:-2934470 | MS.gene76545:CDS |
| CTGGTGAGATGGAGTTGAAG+AGG | 0.576523 | 2.3:+2936078 | None:intergenic |
| CAGTAAAACTATACATAGCT+TGG | 0.576918 | 2.3:-2935049 | MS.gene76545:CDS |
| AATGTATATATCAGGATCAG+AGG | 0.579679 | 2.3:+2930330 | None:intergenic |
| TTCTTTACCAGCAAACCAGT+GGG | 0.580902 | 2.3:-2932471 | MS.gene76545:intron |
| TCCGAAATTAACACTTTGTG+AGG | 0.585080 | 2.3:+2930510 | None:intergenic |
| CAATGGTCTAACTAAGCTTG+TGG | 0.585599 | 2.3:-2926481 | MS.gene76545:CDS |
| GTGGCACATTTCCTTGCCAG+AGG | 0.587914 | 2.3:+2927700 | None:intergenic |
| AAGCGATGAAAGTTTCTGTT+GGG | 0.589357 | 2.3:-2928377 | MS.gene76545:CDS |
| GGAATTGGTTATTCTGTCTG+AGG | 0.592338 | 2.3:-2930449 | MS.gene76545:CDS |
| AAGCTTGCAAGTAGACCAGA+TGG | 0.592834 | 2.3:+2932854 | None:intergenic |
| AATATCAAGAGCTTCTTCCA+AGG | 0.593516 | 2.3:+2928023 | None:intergenic |
| GTTGCTTGGCACTGATAAGG+AGG | 0.593536 | 2.3:-2934448 | MS.gene76545:CDS |
| TTTAGGACTGCATGACAGGA+AGG | 0.596853 | 2.3:-2934345 | MS.gene76545:intron |
| TATCTATCCGTTGAGAACAC+AGG | 0.597641 | 2.3:-2925994 | MS.gene76545:intron |
| CACACATTCCAAATATAAGA+GGG | 0.598820 | 2.3:-2928167 | MS.gene76545:CDS |
| TTAATAATAACCCTCCTCAA+GGG | 0.599027 | 2.3:-2928132 | MS.gene76545:CDS |
| TTTCGTGGTGCAATTTGCTG+TGG | 0.599331 | 2.3:-2928613 | MS.gene76545:CDS |
| TTTCTTTACCAGCAAACCAG+TGG | 0.603166 | 2.3:-2932472 | MS.gene76545:intron |
| TCATTCAGTATAACAATCAG+TGG | 0.604482 | 2.3:+2927192 | None:intergenic |
| TATATTTACCAATTTATCCG+AGG | 0.604801 | 2.3:-2929171 | MS.gene76545:intron |
| TTTACTCTAGCACCCACAGA+TGG | 0.604886 | 2.3:-2930865 | MS.gene76545:CDS |
| ACACTTTATATACTTATTTG+GGG | 0.607680 | 2.3:-2930903 | MS.gene76545:CDS |
| AGAACTACTCTCAGGATGCA+GGG | 0.611678 | 2.3:-2930470 | MS.gene76545:CDS |
| GGAAAAGGTTTGCTGTTGCG+TGG | 0.612022 | 2.3:-2927844 | MS.gene76545:CDS |
| CTGGAACAACACCCTTGAGG+AGG | 0.612104 | 2.3:+2928121 | None:intergenic |
| TACAGCTAAGACTGAACCAA+AGG | 0.615923 | 2.3:+2930369 | None:intergenic |
| AGAAATGTGATCCTCTGGCA+AGG | 0.616514 | 2.3:-2927711 | MS.gene76545:CDS |
| CCTTGAAAATGGAGGTGCAG+AGG | 0.618663 | 2.3:-2928637 | MS.gene76545:CDS |
| AGTCTGATACCGTCTTATGA+GGG | 0.618808 | 2.3:+2926454 | None:intergenic |
| TGACCTATCAAGGACTCTGA+TGG | 0.620654 | 2.3:-2932428 | MS.gene76545:intron |
| GGAAAGTTAATACCATCTGT+GGG | 0.621048 | 2.3:+2930853 | None:intergenic |
| AAACTCACTTCGAAATCCAA+TGG | 0.626907 | 2.3:-2928069 | MS.gene76545:CDS |
| CATTTCCCCTAAGGATGAAG+GGG | 0.630449 | 2.3:-2928235 | MS.gene76545:CDS |
| CACTTTATATACTTATTTGG+GGG | 0.631526 | 2.3:-2930902 | MS.gene76545:CDS |
| TGACAAACCTGTGTTCTCAA+CGG | 0.634669 | 2.3:+2925987 | None:intergenic |
| AAGTACCCCTTCATCCTTAG+GGG | 0.634965 | 2.3:+2928230 | None:intergenic |
| GTCAGACATGACATGTGCAA+AGG | 0.638569 | 2.3:+2927218 | None:intergenic |
| TGAGCCTTCAACTAAAGGCA+CGG | 0.639359 | 2.3:+2927753 | None:intergenic |
| TGGAACAACACCCTTGAGGA+GGG | 0.639744 | 2.3:+2928122 | None:intergenic |
| GGCATTAAATAAGACAGCTG+AGG | 0.645320 | 2.3:+2930390 | None:intergenic |
| TTGCACATGAGTATCCCCAC+TGG | 0.650398 | 2.3:+2932456 | None:intergenic |
| CTTATATAGAGGCCGTACTG+TGG | 0.653810 | 2.3:+2927618 | None:intergenic |
| AAGAACATGAAAAGCTTCCG+TGG | 0.653843 | 2.3:+2927681 | None:intergenic |
| TGGAACACAGCATTGCAGGA+AGG | 0.653866 | 2.3:+2930613 | None:intergenic |
| ATGAAATAATGCTTTCAATG+TGG | 0.654390 | 2.3:+2929391 | None:intergenic |
| AACGGATAGATACGCACATG+AGG | 0.657874 | 2.3:+2926005 | None:intergenic |
| TACGGCCTCTATATAAGCAG+AGG | 0.658188 | 2.3:-2927612 | MS.gene76545:CDS |
| GGCAGGATCCTTGAAAATGG+AGG | 0.660852 | 2.3:-2928645 | MS.gene76545:intron |
| TCTGGCAAGGAAATGTGCCA+CGG | 0.665729 | 2.3:-2927698 | MS.gene76545:CDS |
| TGTGGACTACCCTCATAAGA+CGG | 0.673290 | 2.3:-2926463 | MS.gene76545:intron |
| ATTGATGGCTTGCAAAATGG+CGG | 0.675116 | 2.3:-2930541 | MS.gene76545:CDS |
| CAACTGGAACAACACCCTTG+AGG | 0.676901 | 2.3:+2928118 | None:intergenic |
| GAAACGAAGACTCCTAGATG+AGG | 0.685715 | 2.3:+2925593 | None:intergenic |
| AATGTGACGAGTCAATTGAG+TGG | 0.686701 | 2.3:+2936117 | None:intergenic |
| GGAAGTAAGGACTACCAATG+AGG | 0.689143 | 2.3:+2933900 | None:intergenic |
| GAGAATCGCAAAATATACTG+GGG | 0.706671 | 2.3:-2930947 | MS.gene76545:CDS |
| GCAGATTGGAAAGCAGTACG+AGG | 0.712571 | 2.3:-2934482 | MS.gene76545:CDS |
| TCTTTACCAGCAAACCAGTG+GGG | 0.721811 | 2.3:-2932470 | MS.gene76545:intron |
| AGTTGAAGAGGAGTCAACGT+AGG | 0.742240 | 2.3:+2936090 | None:intergenic |
| TGTATATATCAGGATCAGAG+GGG | 0.758584 | 2.3:+2930332 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 2925590 | 2936149 | 2925590 | ID=MS.gene76545 |
| chr2.3 | mRNA | 2925590 | 2936149 | 2925590 | ID=MS.gene76545.t1;Parent=MS.gene76545 |
| chr2.3 | exon | 2936078 | 2936149 | 2936078 | ID=MS.gene76545.t1.exon1;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2936078 | 2936149 | 2936078 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2935935 | 2935997 | 2935935 | ID=MS.gene76545.t1.exon2;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2935935 | 2935997 | 2935935 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2935750 | 2935804 | 2935750 | ID=MS.gene76545.t1.exon3;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2935750 | 2935804 | 2935750 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2935026 | 2935123 | 2935026 | ID=MS.gene76545.t1.exon4;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2935026 | 2935123 | 2935026 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2934346 | 2934504 | 2934346 | ID=MS.gene76545.t1.exon5;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2934346 | 2934504 | 2934346 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2933915 | 2933974 | 2933915 | ID=MS.gene76545.t1.exon6;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2933915 | 2933974 | 2933915 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2932799 | 2932987 | 2932799 | ID=MS.gene76545.t1.exon7;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2932799 | 2932987 | 2932799 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2932429 | 2932482 | 2932429 | ID=MS.gene76545.t1.exon8;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2932429 | 2932482 | 2932429 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2931149 | 2931235 | 2931149 | ID=MS.gene76545.t1.exon9;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2931149 | 2931235 | 2931149 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2930326 | 2931019 | 2930326 | ID=MS.gene76545.t1.exon10;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2930326 | 2931019 | 2930326 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2929172 | 2929545 | 2929172 | ID=MS.gene76545.t1.exon11;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2929172 | 2929545 | 2929172 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2928862 | 2928935 | 2928862 | ID=MS.gene76545.t1.exon12;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2928862 | 2928935 | 2928862 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2928557 | 2928662 | 2928557 | ID=MS.gene76545.t1.exon13;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2928557 | 2928662 | 2928557 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2927547 | 2928421 | 2927547 | ID=MS.gene76545.t1.exon14;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2927547 | 2928421 | 2927547 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2927182 | 2927257 | 2927182 | ID=MS.gene76545.t1.exon15;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2927182 | 2927257 | 2927182 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2926965 | 2927076 | 2926965 | ID=MS.gene76545.t1.exon16;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2926965 | 2927076 | 2926965 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2926464 | 2926540 | 2926464 | ID=MS.gene76545.t1.exon17;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2926464 | 2926540 | 2926464 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2925995 | 2926075 | 2925995 | ID=MS.gene76545.t1.exon18;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2925995 | 2926075 | 2925995 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2925727 | 2925806 | 2925727 | ID=MS.gene76545.t1.exon19;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2925727 | 2925806 | 2925727 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| chr2.3 | exon | 2925590 | 2925626 | 2925590 | ID=MS.gene76545.t1.exon20;Parent=MS.gene76545.t1 |
| chr2.3 | CDS | 2925590 | 2925626 | 2925590 | ID=cds.MS.gene76545.t1;Parent=MS.gene76545.t1 |
| Gene Sequence |
| Protein sequence |