AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76822

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76822.t1 MTR_1g008290 34.921 126 79 1 103 228 22 144 3.08e-22 94.0
MS.gene76822.t1 MTR_4g035820 25.729 377 240 11 29 387 70 424 1.58e-19 93.6
MS.gene76822.t1 MTR_6g051425 25.926 216 143 5 37 240 20 230 1.91e-17 84.7
MS.gene76822.t1 MTR_3g006370 37.383 107 60 2 33 134 49 153 2.62e-16 79.0
MS.gene76822.t1 MTR_4g067290 29.630 135 91 2 3 136 28 159 8.51e-15 74.7
MS.gene76822.t1 MTR_4g067290 29.630 135 91 2 3 136 28 159 8.73e-15 74.7
MS.gene76822.t1 MTR_4g067290 29.630 135 91 2 3 136 48 179 1.31e-14 74.7
MS.gene76822.t1 MTR_4g067290 29.630 135 91 2 3 136 48 179 1.46e-14 74.7
MS.gene76822.t1 MTR_4g067290 29.630 135 91 2 3 136 46 177 1.57e-14 74.3
MS.gene76822.t1 MTR_4g067290 29.630 135 91 2 3 136 88 219 1.71e-14 75.1
MS.gene76822.t1 MTR_1g070355 28.910 211 135 7 39 240 79 283 5.94e-13 72.4
MS.gene76822.t1 MTR_6g022070 31.111 135 90 3 244 376 34 167 2.65e-12 68.9
MS.gene76822.t1 MTR_2g098880 31.250 112 72 2 28 134 54 165 6.88e-12 66.6
MS.gene76822.t1 MTR_2g098880 31.250 112 72 2 28 134 66 177 7.49e-12 66.6
MS.gene76822.t1 MTR_8g465780 29.231 130 87 3 283 408 1 129 5.50e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76822.t1 AT4G15090 58.028 436 156 3 241 653 381 812 4.97e-176 522
MS.gene76822.t1 AT4G15090 76.577 222 49 2 22 240 39 260 2.40e-108 347
MS.gene76822.t1 AT4G15090 58.028 436 156 3 241 653 381 812 4.97e-176 522
MS.gene76822.t1 AT4G15090 76.577 222 49 2 22 240 39 260 2.40e-108 347
MS.gene76822.t1 AT4G15090 58.028 436 156 3 241 653 381 812 4.97e-176 522
MS.gene76822.t1 AT4G15090 76.577 222 49 2 22 240 39 260 2.40e-108 347
MS.gene76822.t1 AT4G15090 58.028 436 156 3 241 653 381 812 4.97e-176 522
MS.gene76822.t1 AT4G15090 76.577 222 49 2 22 240 39 260 2.40e-108 347
MS.gene76822.t1 AT4G15090 58.028 436 156 3 241 653 381 812 4.97e-176 522
MS.gene76822.t1 AT4G15090 76.577 222 49 2 22 240 39 260 2.40e-108 347
MS.gene76822.t1 AT3G22170 48.451 452 205 5 241 666 390 839 7.03e-134 414
MS.gene76822.t1 AT3G22170 43.777 233 93 3 23 240 60 269 2.41e-57 208
MS.gene76822.t1 AT3G22170 48.451 452 205 5 241 666 390 839 7.03e-134 414
MS.gene76822.t1 AT3G22170 43.777 233 93 3 23 240 60 269 2.41e-57 208
MS.gene76822.t1 AT1G76320 44.479 317 170 2 240 552 317 631 4.81e-94 305
MS.gene76822.t1 AT1G76320 44.335 203 107 2 38 240 1 197 1.12e-50 187
MS.gene76822.t1 AT1G76320 38.072 415 229 5 239 627 316 728 7.03e-94 306
MS.gene76822.t1 AT1G76320 44.335 203 107 2 38 240 1 197 1.89e-50 187
MS.gene76822.t1 AT1G76320 38.072 415 229 5 239 627 316 728 7.03e-94 306
MS.gene76822.t1 AT1G76320 44.335 203 107 2 38 240 1 197 1.89e-50 187
MS.gene76822.t1 AT1G76320 44.340 318 171 2 239 552 316 631 8.21e-94 306
MS.gene76822.t1 AT1G76320 44.335 203 107 2 38 240 1 197 1.89e-50 187
MS.gene76822.t1 AT4G19990 44.246 391 199 5 242 613 273 663 5.90e-85 281
MS.gene76822.t1 AT4G19990 33.696 184 72 2 72 240 2 150 2.70e-22 102
MS.gene76822.t1 AT4G19990 44.246 391 199 5 242 613 330 720 1.13e-84 282
MS.gene76822.t1 AT4G19990 37.778 225 90 2 31 240 18 207 1.94e-36 146
MS.gene76822.t1 AT4G19990 44.246 391 199 5 242 613 330 720 1.13e-84 282
MS.gene76822.t1 AT4G19990 37.778 225 90 2 31 240 18 207 1.94e-36 146
MS.gene76822.t1 AT4G19990 44.246 391 199 5 242 613 330 720 1.19e-84 282
MS.gene76822.t1 AT4G19990 38.938 226 86 4 31 240 18 207 1.83e-36 146
MS.gene76822.t1 AT4G19990 44.246 391 199 5 242 613 330 720 1.29e-84 282
MS.gene76822.t1 AT4G19990 37.778 225 90 2 31 240 18 207 2.95e-36 146
MS.gene76822.t1 AT4G19990 44.246 391 199 5 242 613 330 720 1.29e-84 282
MS.gene76822.t1 AT4G19990 37.778 225 90 2 31 240 18 207 2.95e-36 146
MS.gene76822.t1 AT4G19990 44.246 391 199 5 242 613 344 734 1.65e-84 282
MS.gene76822.t1 AT4G19990 37.778 225 90 2 31 240 32 221 2.25e-36 146
MS.gene76822.t1 AT2G32250 36.930 417 235 5 243 635 286 698 1.12e-77 263
MS.gene76822.t1 AT2G32250 36.946 203 88 3 38 240 1 163 9.50e-28 119
MS.gene76822.t1 AT2G32250 36.930 417 235 5 243 635 286 698 1.24e-77 263
MS.gene76822.t1 AT2G32250 36.946 203 88 3 38 240 1 163 8.81e-28 119
MS.gene76822.t1 AT2G32250 37.019 416 234 5 244 635 328 739 1.75e-77 263
MS.gene76822.t1 AT2G32250 37.561 205 88 3 36 240 40 204 2.47e-29 124
MS.gene76822.t1 AT2G32250 37.019 416 234 5 244 635 328 739 2.46e-77 263
MS.gene76822.t1 AT2G32250 37.500 208 90 3 33 240 37 204 2.77e-29 124
MS.gene76822.t1 AT2G32250 37.019 416 234 5 244 635 328 739 2.46e-77 263
MS.gene76822.t1 AT2G32250 37.500 208 90 3 33 240 37 204 2.77e-29 124
MS.gene76822.t1 AT2G32250 37.019 416 234 5 244 635 328 739 2.49e-77 263
MS.gene76822.t1 AT2G32250 37.500 208 90 3 33 240 37 204 2.69e-29 124
MS.gene76822.t1 AT2G32250 37.019 416 234 5 244 635 328 739 2.49e-77 263
MS.gene76822.t1 AT2G32250 37.500 208 90 3 33 240 37 204 2.69e-29 124
MS.gene76822.t1 AT2G32250 37.019 416 234 5 244 635 328 739 2.49e-77 263
MS.gene76822.t1 AT2G32250 37.500 208 90 3 33 240 37 204 2.69e-29 124
MS.gene76822.t1 AT4G38180 34.539 304 192 3 232 528 395 698 2.03e-54 199
MS.gene76822.t1 AT4G38180 34.259 216 135 3 31 240 70 284 1.41e-30 128
MS.gene76822.t1 AT2G27110 33.219 292 184 4 241 526 207 493 5.60e-48 180
MS.gene76822.t1 AT1G52520 34.539 304 179 5 233 520 393 692 6.52e-48 180
MS.gene76822.t1 AT1G52520 31.308 214 132 6 34 244 85 286 8.21e-22 100
MS.gene76822.t1 AT2G27110 33.219 292 184 4 241 526 352 638 1.24e-47 180
MS.gene76822.t1 AT2G27110 27.751 209 125 5 33 240 48 231 3.45e-17 86.3
MS.gene76822.t1 AT2G27110 33.219 292 184 4 241 526 352 638 1.24e-47 180
MS.gene76822.t1 AT2G27110 27.751 209 125 5 33 240 48 231 3.45e-17 86.3
MS.gene76822.t1 AT4G38170 30.211 331 208 5 232 548 160 481 4.20e-46 172
MS.gene76822.t1 AT1G80010 31.884 276 173 8 259 524 444 714 3.14e-37 149
MS.gene76822.t1 AT1G80010 29.767 215 140 4 34 240 95 306 2.08e-19 93.2
MS.gene76822.t1 AT5G18960 31.276 243 163 2 229 470 490 729 4.34e-34 139
MS.gene76822.t1 AT5G18960 31.276 243 163 2 229 470 490 729 4.34e-34 139
MS.gene76822.t1 AT3G06250 31.746 252 156 5 225 470 464 705 4.50e-34 139
MS.gene76822.t1 AT3G06250 33.929 112 63 1 22 133 16 116 6.59e-11 66.2
MS.gene76822.t1 AT3G06250 31.746 252 156 5 225 470 464 705 4.50e-34 139
MS.gene76822.t1 AT3G06250 33.929 112 63 1 22 133 16 116 6.59e-11 66.2
MS.gene76822.t1 AT3G06250 31.746 252 156 5 225 470 464 705 4.50e-34 139
MS.gene76822.t1 AT3G06250 33.929 112 63 1 22 133 16 116 6.59e-11 66.2
MS.gene76822.t1 AT1G10240 30.131 229 151 3 259 482 401 625 4.66e-26 114
MS.gene76822.t1 AT1G10240 27.928 222 138 8 34 240 48 262 9.99e-12 68.6
MS.gene76822.t1 AT1G10240 30.131 229 151 3 259 482 401 625 4.66e-26 114
MS.gene76822.t1 AT1G10240 27.928 222 138 8 34 240 48 262 9.99e-12 68.6
MS.gene76822.t1 AT5G28530 30.594 219 125 7 259 468 353 553 8.06e-19 91.3
MS.gene76822.t1 AT5G28530 28.270 237 146 7 241 468 336 557 1.23e-18 90.5
MS.gene76822.t1 AT5G28530 29.536 237 139 8 241 468 399 616 1.27e-18 90.9
MS.gene76822.t1 AT5G28530 29.536 237 139 8 241 468 399 616 1.27e-18 90.9
MS.gene76822.t1 AT5G28530 28.270 237 146 7 241 468 399 620 1.67e-18 90.5
MS.gene76822.t1 AT2G43280 36.975 119 66 3 29 140 17 133 5.89e-16 77.4
MS.gene76822.t1 AT4G12850 39.604 101 60 1 33 133 10 109 4.61e-15 73.2
MS.gene76822.t1 AT4G12850 39.604 101 60 1 33 133 10 109 6.00e-15 72.8
MS.gene76822.t1 AT3G59470 34.286 105 68 1 33 136 69 173 1.20e-14 74.7
MS.gene76822.t1 AT3G59470 34.286 105 68 1 33 136 69 173 1.20e-14 74.7
MS.gene76822.t1 AT3G59470 34.286 105 68 1 33 136 81 185 1.26e-14 75.1
MS.gene76822.t1 AT4G12850 39.604 101 60 1 33 133 10 109 2.33e-14 72.4
MS.gene76822.t1 AT3G07500 30.323 155 98 2 27 179 26 172 3.02e-14 72.8
MS.gene76822.t1 AT2G43280 35.354 99 55 3 49 140 2 98 3.79e-11 62.8

Find 129 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTACAGGTTCCCTAATTT+TGG 0.145787 1.1:+76590835 None:intergenic
ACTGTTTCACAAACTCTTTA+AGG 0.204134 1.1:+76591263 None:intergenic
AACGTTTAAGAAATATATTT+TGG 0.206444 1.1:-76591900 MS.gene76822:CDS
TCGGATGCAATTGCCCTTAA+TGG 0.236596 1.1:-76590185 MS.gene76822:CDS
ATTGCCCTTAATGGATATTA+TGG 0.237741 1.1:-76590176 MS.gene76822:CDS
GGACCAAAGATGCCAAAATT+AGG 0.253094 1.1:-76590847 MS.gene76822:CDS
TTTGGCATCAATAAATTCTT+TGG 0.254194 1.1:+76592383 None:intergenic
CATTTCAACATACATCTTTC+GGG 0.258771 1.1:+76592104 None:intergenic
GCATGTACAGTTGAATTTAA+TGG 0.265746 1.1:-76590035 MS.gene76822:CDS
TGTCGATTGTTCGAATATAA+AGG 0.270665 1.1:-76590950 MS.gene76822:CDS
GAGTACCATAATATCCATTA+AGG 0.276199 1.1:+76590171 None:intergenic
TCAAGAGTATGCCAAATCTA+TGG 0.278613 1.1:-76592448 MS.gene76822:CDS
ATACCTAGAGCACGCGAATT+TGG 0.279686 1.1:+76592365 None:intergenic
ACATTTCAACATACATCTTT+CGG 0.295052 1.1:+76592103 None:intergenic
AAGAAAGCTATGCCCCTCTT+AGG 0.295788 1.1:+76592543 None:intergenic
CTGTTTCACAAACTCTTTAA+GGG 0.296391 1.1:+76591264 None:intergenic
TATCGTCCGACAACCACTTT+TGG 0.332110 1.1:-76589644 MS.gene76822:CDS
AAAATGCAATTCTTAAACTT+TGG 0.338533 1.1:+76591502 None:intergenic
AAAATGTTCCATTTCCCATC+TGG 0.352283 1.1:+76592252 None:intergenic
AACGACAATGGTGCAGAAAC+TGG 0.362647 1.1:-76590650 MS.gene76822:CDS
ATAGGTTAATTCTTCTGAAT+AGG 0.384277 1.1:-76591240 MS.gene76822:CDS
GTTGTGTTCCTCTTCTTACT+TGG 0.388273 1.1:+76590569 None:intergenic
AGAAAGCTATGCCCCTCTTA+GGG 0.402896 1.1:+76592544 None:intergenic
ATCTATAGAATAGAAGAAGT+TGG 0.403398 1.1:+76591936 None:intergenic
AAGAGTTTGTGAAACAGTAT+AGG 0.409635 1.1:-76591258 MS.gene76822:CDS
AGTGGTGAATCCCATAGATT+TGG 0.415385 1.1:+76592437 None:intergenic
CACTGGTTGCTTCCCCTAAG+AGG 0.417880 1.1:-76592557 MS.gene76822:CDS
GACCAAAGATGCCAAAATTA+GGG 0.426826 1.1:-76590846 MS.gene76822:CDS
CAGAGGGCAGTATCTAGCTT+TGG 0.433842 1.1:-76592016 MS.gene76822:CDS
TTGAACTCCATGATGATGTT+TGG 0.435488 1.1:-76591423 MS.gene76822:CDS
AAATGTTCCATTTCCCATCT+GGG 0.441346 1.1:+76592253 None:intergenic
TTGCTGTGAAAGTGTGGATC+AGG 0.445132 1.1:+76589484 None:intergenic
TCAAAACATTGGGTCAATCA+TGG 0.447302 1.1:-76592061 MS.gene76822:CDS
CTTTGTGTCCTATCTACTAC+AGG 0.448746 1.1:+76590821 None:intergenic
GTTGAAGTGTTGGGTGTAGC+TGG 0.449517 1.1:-76591094 MS.gene76822:CDS
GTTCATGTAGGGAGGGCAAT+TGG 0.449744 1.1:-76589669 MS.gene76822:intron
TCTATAGAATAGAAGAAGTT+GGG 0.462776 1.1:+76591937 None:intergenic
GGGAGATGGGCAAGTTATGC+TGG 0.466240 1.1:-76591989 MS.gene76822:CDS
TCAAGATACCCTGCAGCAAA+TGG 0.468448 1.1:-76590399 MS.gene76822:intron
ACTTAAATCTCCTTCACCTT+GGG 0.470138 1.1:-76591167 MS.gene76822:CDS
GTTGAAATGTCTAGACAATC+TGG 0.471543 1.1:-76592090 MS.gene76822:CDS
GAAATTCCAAGTTGAAGTGT+TGG 0.475026 1.1:-76591104 MS.gene76822:CDS
AGCAACATTATAACTCTCTT+CGG 0.478706 1.1:+76590724 None:intergenic
ATGCCAAATTCGCGTGCTCT+AGG 0.479668 1.1:-76592368 MS.gene76822:CDS
AGGGGCATAGCTTTCTTTGA+AGG 0.480618 1.1:-76592537 MS.gene76822:CDS
ACTGGTTGCTTCCCCTAAGA+GGG 0.487153 1.1:-76592556 MS.gene76822:CDS
AAATTCCAAGTTGAAGTGTT+GGG 0.488182 1.1:-76591103 MS.gene76822:CDS
TTAGGGAACCTGTAGTAGAT+AGG 0.488222 1.1:-76590829 MS.gene76822:CDS
CTGGTGGCTGTCAAAACATT+GGG 0.488703 1.1:-76592071 MS.gene76822:CDS
GTATTTCAAGCATATTCAAA+AGG 0.489011 1.1:-76591965 MS.gene76822:CDS
GTCAAACTGTTCATCTGTCC+AGG 0.491245 1.1:+76591474 None:intergenic
GTGTAGCTGGATGTCAATCT+AGG 0.493252 1.1:-76591081 MS.gene76822:CDS
TTCACTCATTGTACGAAGAC+CGG 0.494147 1.1:-76591399 MS.gene76822:CDS
GTTTCAAATTCAATGCCGTT+AGG 0.501314 1.1:+76592495 None:intergenic
CACTTAAATCTCCTTCACCT+TGG 0.501635 1.1:-76591168 MS.gene76822:CDS
CGAAAATGATATGCCAAAGC+TGG 0.503037 1.1:+76592195 None:intergenic
AGTACCATAATATCCATTAA+GGG 0.503128 1.1:+76590172 None:intergenic
AGTATTGCGTTGAGTGAAGA+AGG 0.512046 1.1:-76590755 MS.gene76822:CDS
GGTGAAGGAGATTTAAGTGC+AGG 0.515427 1.1:+76591172 None:intergenic
GCATCACACGGGTGGTGCAC+TGG 0.518829 1.1:-76592574 MS.gene76822:CDS
CAAGAGTATGCCAAATCTAT+GGG 0.524696 1.1:-76592447 MS.gene76822:CDS
CTAGCTTTGGATGAGGGAGA+TGG 0.526413 1.1:-76592003 MS.gene76822:CDS
CAAAACATTGGGTCAATCAT+GGG 0.529150 1.1:-76592060 MS.gene76822:CDS
GGGGCATAGCTTTCTTTGAA+GGG 0.530599 1.1:-76592536 MS.gene76822:CDS
TCTTGAGTGTCGACAAGTAC+AGG 0.531111 1.1:+76590416 None:intergenic
TCAACACAGCATGCAAGGCC+TGG 0.531717 1.1:-76589984 MS.gene76822:intron
CACTTGAACAACCGCAACGT+TGG 0.534327 1.1:+76590897 None:intergenic
TAGCTTTGGATGAGGGAGAT+GGG 0.535356 1.1:-76592002 MS.gene76822:CDS
AGCTTTCTTTGAAGGGGACA+CGG 0.537323 1.1:-76592529 MS.gene76822:CDS
AAACACAAACCATTTGCTGC+AGG 0.538027 1.1:+76590390 None:intergenic
CAGTATCTAGCTTTGGATGA+GGG 0.545999 1.1:-76592009 MS.gene76822:CDS
CTGAAGGCTATATCCAAAAG+TGG 0.546535 1.1:+76589631 None:intergenic
CTACACCCAACACTTCAACT+TGG 0.546709 1.1:+76591098 None:intergenic
AAAGTGGGTACCGACATACA+TGG 0.548302 1.1:-76591374 MS.gene76822:CDS
TCTGGTGGCTGTCAAAACAT+TGG 0.549465 1.1:-76592072 MS.gene76822:CDS
CTCATTATATCATGAAGAGA+TGG 0.550080 1.1:-76590868 MS.gene76822:CDS
AAATTCGCGTGCTCTAGGTA+TGG 0.552712 1.1:-76592363 MS.gene76822:CDS
AGTGAAACCAAACATCATCA+TGG 0.555179 1.1:+76591416 None:intergenic
CACTCAATGCATGTCTGCAA+AGG 0.555274 1.1:+76590924 None:intergenic
CTATATCCAAAAGTGGTTGT+CGG 0.558538 1.1:+76589638 None:intergenic
GCAGTATCTAGCTTTGGATG+AGG 0.560578 1.1:-76592010 MS.gene76822:CDS
TGTCAATCTAGGACAGAGGT+TGG 0.561454 1.1:-76591070 MS.gene76822:CDS
GAACACAACTAGGAAAAGAA+AGG 0.562569 1.1:-76590555 MS.gene76822:intron
TCAGCAGAATGTGCAAGGAC+TGG 0.567200 1.1:-76590150 MS.gene76822:intron
GTTAATCAACACAGCATGCA+AGG 0.568293 1.1:-76589989 MS.gene76822:CDS
GTAAGAAGAGGAACACAACT+AGG 0.569051 1.1:-76590565 MS.gene76822:CDS
CTTCAAAACCAAGTAAGAAG+AGG 0.570332 1.1:-76590577 MS.gene76822:CDS
AAGTGGGTACCGACATACAT+GGG 0.571532 1.1:-76591373 MS.gene76822:CDS
TTTCAAGCATATTCAAAAGG+AGG 0.574379 1.1:-76591962 MS.gene76822:CDS
CTCTTCATGATATAATGAGA+TGG 0.574857 1.1:+76590872 None:intergenic
GTAAATAACTCTAACGACAA+TGG 0.578738 1.1:-76590662 MS.gene76822:CDS
GGGCATAGCTTTCTTTGAAG+GGG 0.579841 1.1:-76592535 MS.gene76822:CDS
GGACACAAAGGATACAAACT+AGG 0.580462 1.1:-76590808 MS.gene76822:CDS
GAACTGTTGCTGTGAAAGTG+TGG 0.585833 1.1:+76589478 None:intergenic
GGTGCAGAAACTGGCAACAA+TGG 0.585898 1.1:-76590641 MS.gene76822:CDS
TCAAATTCAATGCCGTTAGG+TGG 0.590422 1.1:+76592498 None:intergenic
CACACATCATTATAACGTTG+AGG 0.592933 1.1:+76590785 None:intergenic
TCTAGGACAGAGGTTGGAGA+TGG 0.594905 1.1:-76591064 MS.gene76822:CDS
AACACAAACCATTTGCTGCA+GGG 0.603531 1.1:+76590391 None:intergenic
GAAAGCTATGCCCCTCTTAG+GGG 0.607330 1.1:+76592545 None:intergenic
GGTACTCAGCAGAATGTGCA+AGG 0.609447 1.1:-76590155 MS.gene76822:CDS
CGAGTTATCAGTTTGACAGA+GGG 0.612110 1.1:-76592032 MS.gene76822:CDS
TTAATGGAGCCACCTCATGA+TGG 0.615897 1.1:-76590019 MS.gene76822:CDS
AACAGTTTGACATGAGATGG+TGG 0.621739 1.1:-76591462 MS.gene76822:CDS
CTGGTTGCTTCCCCTAAGAG+GGG 0.625137 1.1:-76592555 MS.gene76822:CDS
GGAGTAACACCTGAGTCTGA+TGG 0.629153 1.1:-76592342 MS.gene76822:CDS
ACTGTCGGAACGTTGAGGTG+TGG 0.629360 1.1:+76591327 None:intergenic
CTGCTCCTACCATCAGACTC+AGG 0.632022 1.1:+76592333 None:intergenic
AAAGAAAGAGTTCACACTGT+CGG 0.634665 1.1:+76591312 None:intergenic
TCTTCTGAATAGGTATGATG+AGG 0.638772 1.1:-76591230 MS.gene76822:CDS
TTGAGTGTTCTCCAACGTTG+CGG 0.639483 1.1:-76590908 MS.gene76822:CDS
GTCAATGAAGAGCATCACAC+GGG 0.641639 1.1:-76592585 MS.gene76822:CDS
ATGAACAGTTTGACATGAGA+TGG 0.648940 1.1:-76591465 MS.gene76822:CDS
TGGATGTCAATCTAGGACAG+AGG 0.649330 1.1:-76591074 MS.gene76822:CDS
TATAGTTCAAGATTACGAGA+AGG 0.655112 1.1:-76591026 MS.gene76822:CDS
AGTGGGTACCGACATACATG+GGG 0.658586 1.1:-76591372 MS.gene76822:CDS
TTCACACTGTCGGAACGTTG+AGG 0.659741 1.1:+76591322 None:intergenic
CTATTCTATAGATTTAAACG+AGG 0.660746 1.1:-76591926 MS.gene76822:CDS
ACATAGTAACCATCATGAGG+TGG 0.662349 1.1:+76590010 None:intergenic
ACGAGTTATCAGTTTGACAG+AGG 0.665307 1.1:-76592033 MS.gene76822:CDS
TGTCAATGAAGAGCATCACA+CGG 0.667976 1.1:-76592586 MS.gene76822:CDS
AATGAAGAGCATCACACGGG+TGG 0.670295 1.1:-76592582 MS.gene76822:CDS
TAACACCTGAGTCTGATGGT+AGG 0.675623 1.1:-76592338 MS.gene76822:CDS
CTGTAGTAGATAGGACACAA+AGG 0.687200 1.1:-76590820 MS.gene76822:CDS
TTAACATAGTAACCATCATG+AGG 0.693243 1.1:+76590007 None:intergenic
TTGGAACGAGTTGAGCTCAG+AGG 0.703393 1.1:-76590984 MS.gene76822:CDS
ACAGTTTGACATGAGATGGT+GGG 0.706939 1.1:-76591461 MS.gene76822:CDS
GAAATGTCTAGACAATCTGG+TGG 0.763154 1.1:-76592087 MS.gene76822:CDS
GTGGGTACCGACATACATGG+GGG 0.773235 1.1:-76591371 MS.gene76822:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAATTATTAATTATAA+AGG - chr1.1:76592149-76592168 MS.gene76822:CDS 0.0%
!!! AACGTTTAAGAAATATATTT+TGG - chr1.1:76590162-76590181 MS.gene76822:CDS 15.0%
!!! ACGTTTAAGAAATATATTTT+GGG - chr1.1:76590163-76590182 MS.gene76822:CDS 15.0%
!!! GAACATTTTTGAATTTATAA+AGG - chr1.1:76589824-76589843 MS.gene76822:intron 15.0%
!! AAAATGCAATTCTTAAACTT+TGG + chr1.1:76590563-76590582 None:intergenic 20.0%
!! AGAAGATTATATTCATGATT+AGG + chr1.1:76592112-76592131 None:intergenic 20.0%
!! CTAATAAGTAACTAAGTATA+CGG + chr1.1:76592475-76592494 None:intergenic 20.0%
!! TAATTTCCCAATAATTTCAT+AGG + chr1.1:76592327-76592346 None:intergenic 20.0%
!! TACTTTCCTATGAAATTATT+GGG - chr1.1:76592318-76592337 MS.gene76822:CDS 20.0%
!! TTAGATTATACAAATAAGCA+TGG - chr1.1:76591720-76591739 MS.gene76822:intron 20.0%
!!! TGCTTAATAGATTGTAATTT+TGG - chr1.1:76591996-76592015 MS.gene76822:CDS 20.0%
! ACATTTCAACATACATCTTT+CGG + chr1.1:76589962-76589981 None:intergenic 25.0%
! AGAACATTGTAATCATTTGA+TGG + chr1.1:76591954-76591973 None:intergenic 25.0%
! AGTACCATAATATCCATTAA+GGG + chr1.1:76591893-76591912 None:intergenic 25.0%
! ATAGGTTAATTCTTCTGAAT+AGG - chr1.1:76590822-76590841 MS.gene76822:CDS 25.0%
! ATCTATAGAATAGAAGAAGT+TGG + chr1.1:76590129-76590148 None:intergenic 25.0%
! ATTGATATTCATATCGTTGT+AGG - chr1.1:76592221-76592240 MS.gene76822:CDS 25.0%
! CTATTCTATAGATTTAAACG+AGG - chr1.1:76590136-76590155 MS.gene76822:intron 25.0%
! GTACTTTCCTATGAAATTAT+TGG - chr1.1:76592317-76592336 MS.gene76822:CDS 25.0%
! GTATTTCAAGCATATTCAAA+AGG - chr1.1:76590097-76590116 MS.gene76822:intron 25.0%
! TACTTATTAGCATTTGAACT+TGG - chr1.1:76592485-76592504 MS.gene76822:CDS 25.0%
! TCTATAGAATAGAAGAAGTT+GGG + chr1.1:76590128-76590147 None:intergenic 25.0%
! TTGATATTCATATCGTTGTA+GGG - chr1.1:76592222-76592241 MS.gene76822:CDS 25.0%
! TTTGGCATCAATAAATTCTT+TGG + chr1.1:76589682-76589701 None:intergenic 25.0%
!! TGAATAGAATAATTTGTGCT+TGG - chr1.1:76592513-76592532 MS.gene76822:CDS 25.0%
!! TTTCTAGCATTTAAAAGATC+AGG - chr1.1:76591579-76591598 MS.gene76822:intron 25.0%
AAACTGCATCATTAAAGCTA+AGG + chr1.1:76590214-76590233 None:intergenic 30.0%
AAGAGTTTGTGAAACAGTAT+AGG - chr1.1:76590804-76590823 MS.gene76822:CDS 30.0%
ACTGTTTCACAAACTCTTTA+AGG + chr1.1:76590802-76590821 None:intergenic 30.0%
AGCAACATTATAACTCTCTT+CGG + chr1.1:76591341-76591360 None:intergenic 30.0%
ATAGAAATGCAATTCTCAAG+AGG + chr1.1:76591755-76591774 None:intergenic 30.0%
CAGATCATGAATGAAAAAAG+AGG + chr1.1:76591698-76591717 None:intergenic 30.0%
CATTTCAACATACATCTTTC+GGG + chr1.1:76589961-76589980 None:intergenic 30.0%
CTCATTATATCATGAAGAGA+TGG - chr1.1:76591194-76591213 MS.gene76822:CDS 30.0%
CTCTTCATGATATAATGAGA+TGG + chr1.1:76591193-76591212 None:intergenic 30.0%
CTGTTTCACAAACTCTTTAA+GGG + chr1.1:76590801-76590820 None:intergenic 30.0%
GAGTACCATAATATCCATTA+AGG + chr1.1:76591894-76591913 None:intergenic 30.0%
GCATGTACAGTTGAATTTAA+TGG - chr1.1:76592027-76592046 MS.gene76822:CDS 30.0%
GTAAATAACTCTAACGACAA+TGG - chr1.1:76591400-76591419 MS.gene76822:CDS 30.0%
TATAGTTCAAGATTACGAGA+AGG - chr1.1:76591036-76591055 MS.gene76822:CDS 30.0%
TGATACGAGAATCACTTTAT+AGG - chr1.1:76591606-76591625 MS.gene76822:intron 30.0%
TGATCAGTGACTATAACTTT+GGG + chr1.1:76590410-76590429 None:intergenic 30.0%
TTAACATAGTAACCATCATG+AGG + chr1.1:76592058-76592077 None:intergenic 30.0%
TTGATCAGTGACTATAACTT+TGG + chr1.1:76590411-76590430 None:intergenic 30.0%
TTGCACATAACCTTAATTGT+AGG - chr1.1:76592550-76592569 MS.gene76822:CDS 30.0%
TTTCAAGCATATTCAAAAGG+AGG - chr1.1:76590100-76590119 MS.gene76822:intron 30.0%
! AAATTCCAAGTTGAAGTGTT+GGG - chr1.1:76590959-76590978 MS.gene76822:CDS 30.0%
! ATCACAAAAGACAGATTTTC+AGG + chr1.1:76590518-76590537 None:intergenic 30.0%
! ATTGCCCTTAATGGATATTA+TGG - chr1.1:76591886-76591905 MS.gene76822:intron 30.0%
! CTTTTCTCTTTGTCACATAT+TGG - chr1.1:76590484-76590503 MS.gene76822:intron 30.0%
! TGTCGATTGTTCGAATATAA+AGG - chr1.1:76591112-76591131 MS.gene76822:CDS 30.0%
!! GATACAAGTTTGCTAACTAT+GGG - chr1.1:76592367-76592386 MS.gene76822:CDS 30.0%
!! TGATACAAGTTTGCTAACTA+TGG - chr1.1:76592366-76592385 MS.gene76822:CDS 30.0%
!!! AGAATTGCATTTTTAAGTCC+TGG - chr1.1:76590570-76590589 MS.gene76822:CDS 30.0%
!!! ATGAAGAGTTTTTGGTAACT+TGG - chr1.1:76591059-76591078 MS.gene76822:CDS 30.0%
!!! CTTATCGTTGCTTTTTATGT+AGG + chr1.1:76590249-76590268 None:intergenic 30.0%
!!! CTTTTAGGATAATCTTAGCT+CGG - chr1.1:76591858-76591877 MS.gene76822:intron 30.0%
AAAAGCAATGACGTACACTT+GGG + chr1.1:76590469-76590488 None:intergenic 35.0%
AAAATGTTCCATTTCCCATC+TGG + chr1.1:76589813-76589832 None:intergenic 35.0%
AAAGAAAGAGTTCACACTGT+CGG + chr1.1:76590753-76590772 None:intergenic 35.0%
AAATGCAATTCTCAAGAGGA+TGG + chr1.1:76591751-76591770 None:intergenic 35.0%
AAATGTTCCATTTCCCATCT+GGG + chr1.1:76589812-76589831 None:intergenic 35.0%
AATGCACATCCAAGCAATAT+AGG + chr1.1:76590314-76590333 None:intergenic 35.0%
ACATCCAAGCAATATAGGTT+GGG + chr1.1:76590309-76590328 None:intergenic 35.0%
ACTTAAATCTCCTTCACCTT+GGG - chr1.1:76590895-76590914 MS.gene76822:CDS 35.0%
AGTGAAACCAAACATCATCA+TGG + chr1.1:76590649-76590668 None:intergenic 35.0%
ATGAACAGTTTGACATGAGA+TGG - chr1.1:76590597-76590616 MS.gene76822:CDS 35.0%
CAAAACATTGGGTCAATCAT+GGG - chr1.1:76590002-76590021 MS.gene76822:CDS 35.0%
CACACATCATTATAACGTTG+AGG + chr1.1:76591280-76591299 None:intergenic 35.0%
CTATATCCAAAAGTGGTTGT+CGG + chr1.1:76592427-76592446 None:intergenic 35.0%
CTCAGTAACCAAACAAAAGT+GGG + chr1.1:76590356-76590375 None:intergenic 35.0%
CTTCAAAACCAAGTAAGAAG+AGG - chr1.1:76591485-76591504 MS.gene76822:CDS 35.0%
GAACACAACTAGGAAAAGAA+AGG - chr1.1:76591507-76591526 MS.gene76822:CDS 35.0%
GACCAAAGATGCCAAAATTA+GGG - chr1.1:76591216-76591235 MS.gene76822:CDS 35.0%
GTTGAAATGTCTAGACAATC+TGG - chr1.1:76589972-76589991 MS.gene76822:intron 35.0%
GTTTCAAATTCAATGCCGTT+AGG + chr1.1:76589570-76589589 None:intergenic 35.0%
TAAGGTTATGTGCAAACAGA+CGG + chr1.1:76592545-76592564 None:intergenic 35.0%
TATATTGCTTGGATGTGCAT+TGG - chr1.1:76590313-76590332 MS.gene76822:intron 35.0%
TCAAAACATTGGGTCAATCA+TGG - chr1.1:76590001-76590020 MS.gene76822:CDS 35.0%
TCTTCTGAATAGGTATGATG+AGG - chr1.1:76590832-76590851 MS.gene76822:CDS 35.0%
TTCTTCAATTGCTTCCTTCA+AGG + chr1.1:76590441-76590460 None:intergenic 35.0%
! ACATGTGCTTTCGTTCTTTT+AGG - chr1.1:76591843-76591862 MS.gene76822:intron 35.0%
! CAAGAGTATGCCAAATCTAT+GGG - chr1.1:76589615-76589634 MS.gene76822:intron 35.0%
! GAAATTCCAAGTTGAAGTGT+TGG - chr1.1:76590958-76590977 MS.gene76822:CDS 35.0%
! GAACACAACAAAGCATTCAT+GGG - chr1.1:76592286-76592305 MS.gene76822:CDS 35.0%
! GCATATCATTTTCGGATTCA+TGG - chr1.1:76589876-76589895 MS.gene76822:intron 35.0%
! TACTACAGGTTCCCTAATTT+TGG + chr1.1:76591230-76591249 None:intergenic 35.0%
! TCAAGAGTATGCCAAATCTA+TGG - chr1.1:76589614-76589633 MS.gene76822:intron 35.0%
! TCATGAACTTTTACCAGCTT+TGG - chr1.1:76589854-76589873 MS.gene76822:intron 35.0%
! TTGAACTCCATGATGATGTT+TGG - chr1.1:76590639-76590658 MS.gene76822:CDS 35.0%
!! ATTTGTTTTTCCCAAGGTGA+AGG + chr1.1:76590908-76590927 None:intergenic 35.0%
!! CAGCTTTGGCATATCATTTT+CGG - chr1.1:76589868-76589887 MS.gene76822:intron 35.0%
!! GCTTACGTGTTAAGTTGTTT+TGG - chr1.1:76591555-76591574 MS.gene76822:intron 35.0%
!! GTTGACATTTGTTTTTCCCA+AGG + chr1.1:76590914-76590933 None:intergenic 35.0%
!! TTCCCTAATTTTGGCATCTT+TGG + chr1.1:76591221-76591240 None:intergenic 35.0%
!!! CTTACTTGGTTTTGAAGCAA+GGG + chr1.1:76591482-76591501 None:intergenic 35.0%
!!! TCTGCTGTTTTTAATGGAAG+TGG + chr1.1:76589646-76589665 None:intergenic 35.0%
!!! TCTTACTTGGTTTTGAAGCA+AGG + chr1.1:76591483-76591502 None:intergenic 35.0%
!!! TGATCGTCTGCTGTTTTTAA+TGG + chr1.1:76589652-76589671 None:intergenic 35.0%
AACAGTTTGACATGAGATGG+TGG - chr1.1:76590600-76590619 MS.gene76822:CDS 40.0%
ACAGTTTGACATGAGATGGT+GGG - chr1.1:76590601-76590620 MS.gene76822:CDS 40.0%
ACATAGTAACCATCATGAGG+TGG + chr1.1:76592055-76592074 None:intergenic 40.0%
ACGAGTTATCAGTTTGACAG+AGG - chr1.1:76590029-76590048 MS.gene76822:CDS 40.0%
ACGTGAAGAAAAACCCAGAT+GGG - chr1.1:76589796-76589815 MS.gene76822:intron 40.0%
ACTCCAACAAAAGGAGCAAA+AGG + chr1.1:76590275-76590294 None:intergenic 40.0%
AGAAAAACCCAGATGGGAAA+TGG - chr1.1:76589802-76589821 MS.gene76822:intron 40.0%
AGGAAAAGAAAGGTCAGTTC+TGG - chr1.1:76591517-76591536 MS.gene76822:CDS 40.0%
AGTATTGCGTTGAGTGAAGA+AGG - chr1.1:76591307-76591326 MS.gene76822:CDS 40.0%
AGTGGTGAATCCCATAGATT+TGG + chr1.1:76589628-76589647 None:intergenic 40.0%
CACATCCAAGCAATATAGGT+TGG + chr1.1:76590310-76590329 None:intergenic 40.0%
CACTTAAATCTCCTTCACCT+TGG - chr1.1:76590894-76590913 MS.gene76822:CDS 40.0%
CATGATTAGGACAACTTACC+AGG + chr1.1:76592099-76592118 None:intergenic 40.0%
CATGTCATGAACAAACCTGA+AGG + chr1.1:76592450-76592469 None:intergenic 40.0%
CCTCAGTAACCAAACAAAAG+TGG + chr1.1:76590357-76590376 None:intergenic 40.0%
CGAAAATGATATGCCAAAGC+TGG + chr1.1:76589870-76589889 None:intergenic 40.0%
CGAGTTATCAGTTTGACAGA+GGG - chr1.1:76590030-76590049 MS.gene76822:CDS 40.0%
CTGAAGGCTATATCCAAAAG+TGG + chr1.1:76592434-76592453 None:intergenic 40.0%
CTGTAGTAGATAGGACACAA+AGG - chr1.1:76591242-76591261 MS.gene76822:CDS 40.0%
CTTTGTGTCCTATCTACTAC+AGG + chr1.1:76591244-76591263 None:intergenic 40.0%
GAAAAGCAATGACGTACACT+TGG + chr1.1:76590470-76590489 None:intergenic 40.0%
GAAATGTCTAGACAATCTGG+TGG - chr1.1:76589975-76589994 MS.gene76822:intron 40.0%
GGACACAAAGGATACAAACT+AGG - chr1.1:76591254-76591273 MS.gene76822:CDS 40.0%
GGACCAAAGATGCCAAAATT+AGG - chr1.1:76591215-76591234 MS.gene76822:CDS 40.0%
GTAAGAAGAGGAACACAACT+AGG - chr1.1:76591497-76591516 MS.gene76822:CDS 40.0%
GTAGGGTCCATTGAATTCTA+TGG - chr1.1:76592239-76592258 MS.gene76822:CDS 40.0%
GTGTTCCAAAATACCCATCA+TGG + chr1.1:76592272-76592291 None:intergenic 40.0%
GTTAATCAACACAGCATGCA+AGG - chr1.1:76592073-76592092 MS.gene76822:CDS 40.0%
GTTGTGTTCCTCTTCTTACT+TGG + chr1.1:76591496-76591515 None:intergenic 40.0%
TCAAATTCAATGCCGTTAGG+TGG + chr1.1:76589567-76589586 None:intergenic 40.0%
TCAGGCTCATCCTACAATTA+AGG + chr1.1:76592563-76592582 None:intergenic 40.0%
TGATCAAGACAAAGCCTTGA+AGG - chr1.1:76590424-76590443 MS.gene76822:CDS 40.0%
TGATGGTTCACTCCAACAAA+AGG + chr1.1:76590284-76590303 None:intergenic 40.0%
TTAGGGAACCTGTAGTAGAT+AGG - chr1.1:76591233-76591252 MS.gene76822:CDS 40.0%
TTCACTCATTGTACGAAGAC+CGG - chr1.1:76590663-76590682 MS.gene76822:CDS 40.0%
TTGTTTGGTTACTGAGGACA+TGG - chr1.1:76590360-76590379 MS.gene76822:intron 40.0%
! AAACACAAACCATTTGCTGC+AGG + chr1.1:76591675-76591694 None:intergenic 40.0%
! AAAGGTCAGTTCTGGTAATG+TGG - chr1.1:76591525-76591544 MS.gene76822:intron 40.0%
! AACACAAACCATTTGCTGCA+GGG + chr1.1:76591674-76591693 None:intergenic 40.0%
! ACAACAAAGCATTCATGGGA+TGG - chr1.1:76592290-76592309 MS.gene76822:CDS 40.0%
! CACTTTTGGATATAGCCTTC+AGG - chr1.1:76592432-76592451 MS.gene76822:CDS 40.0%
! CGAGAAGGATGAAGAGTTTT+TGG - chr1.1:76591051-76591070 MS.gene76822:CDS 40.0%
! GGAACACAACAAAGCATTCA+TGG - chr1.1:76592285-76592304 MS.gene76822:CDS 40.0%
! TTGCCTTTTGCTCCTTTTGT+TGG - chr1.1:76590269-76590288 MS.gene76822:intron 40.0%
!! AACTATGGGTTGGTTCATGT+AGG - chr1.1:76592381-76592400 MS.gene76822:CDS 40.0%
!! ACTATGGGTTGGTTCATGTA+GGG - chr1.1:76592382-76592401 MS.gene76822:CDS 40.0%
!! AGACTAAGCCCACTTTTGTT+TGG - chr1.1:76590345-76590364 MS.gene76822:intron 40.0%
!! CAAGTTTGCTAACTATGGGT+TGG - chr1.1:76592371-76592390 MS.gene76822:CDS 40.0%
!! CAGTATCTAGCTTTGGATGA+GGG - chr1.1:76590053-76590072 MS.gene76822:intron 40.0%
!! CCACTTTTGTTTGGTTACTG+AGG - chr1.1:76590354-76590373 MS.gene76822:intron 40.0%
!! TGTCAATGAAGAGCATCACA+CGG - chr1.1:76589476-76589495 MS.gene76822:CDS 40.0%
AACGACAATGGTGCAGAAAC+TGG - chr1.1:76591412-76591431 MS.gene76822:CDS 45.0%
AAGAAAGCTATGCCCCTCTT+AGG + chr1.1:76589522-76589541 None:intergenic 45.0%
AAGACATCCCCCATGTATGT+CGG + chr1.1:76590701-76590720 None:intergenic 45.0%
AGAAAGCTATGCCCCTCTTA+GGG + chr1.1:76589521-76589540 None:intergenic 45.0%
ATACCTAGAGCACGCGAATT+TGG + chr1.1:76589700-76589719 None:intergenic 45.0%
CACGTGAAGAAAAACCCAGA+TGG - chr1.1:76589795-76589814 MS.gene76822:intron 45.0%
CACTCAATGCATGTCTGCAA+AGG + chr1.1:76591141-76591160 None:intergenic 45.0%
CACTCCCAACCTATATTGCT+TGG - chr1.1:76590302-76590321 MS.gene76822:intron 45.0%
CCAAAATACCCATCATGGCT+CGG + chr1.1:76592267-76592286 None:intergenic 45.0%
CTACACCCAACACTTCAACT+TGG + chr1.1:76590967-76590986 None:intergenic 45.0%
CTACTGCTTGCATTGCATCA+AGG - chr1.1:76591787-76591806 MS.gene76822:intron 45.0%
CTCGGAGCCATAGAATTCAA+TGG + chr1.1:76592249-76592268 None:intergenic 45.0%
CTGGTGGCTGTCAAAACATT+GGG - chr1.1:76589991-76590010 MS.gene76822:CDS 45.0%
CTTGATGCAATGCAAGCAGT+AGG + chr1.1:76591789-76591808 None:intergenic 45.0%
GAACTGTTGCTGTGAAAGTG+TGG + chr1.1:76592587-76592606 None:intergenic 45.0%
GGGGCATAGCTTTCTTTGAA+GGG - chr1.1:76589526-76589545 MS.gene76822:intron 45.0%
GGTGAAGGAGATTTAAGTGC+AGG + chr1.1:76590893-76590912 None:intergenic 45.0%
GTACGAAGACCGGAAAAAGT+GGG - chr1.1:76590673-76590692 MS.gene76822:CDS 45.0%
GTCAAACTGTTCATCTGTCC+AGG + chr1.1:76590591-76590610 None:intergenic 45.0%
GTGTAGCTGGATGTCAATCT+AGG - chr1.1:76590981-76591000 MS.gene76822:CDS 45.0%
GTTACATGAAGCGCATGCTA+TGG + chr1.1:76591825-76591844 None:intergenic 45.0%
TAACACCTGAGTCTGATGGT+AGG - chr1.1:76589724-76589743 MS.gene76822:intron 45.0%
TCAAGATACCCTGCAGCAAA+TGG - chr1.1:76591663-76591682 MS.gene76822:intron 45.0%
TCGGATGCAATTGCCCTTAA+TGG - chr1.1:76591877-76591896 MS.gene76822:intron 45.0%
TCTGGTGGCTGTCAAAACAT+TGG - chr1.1:76589990-76590009 MS.gene76822:CDS 45.0%
TGTACGAAGACCGGAAAAAG+TGG - chr1.1:76590672-76590691 MS.gene76822:CDS 45.0%
TTAATGGAGCCACCTCATGA+TGG - chr1.1:76592043-76592062 MS.gene76822:CDS 45.0%
TTGAGTGTTCTCCAACGTTG+CGG - chr1.1:76591154-76591173 MS.gene76822:CDS 45.0%
! AAATTCGCGTGCTCTAGGTA+TGG - chr1.1:76589699-76589718 MS.gene76822:intron 45.0%
! ACGGATTTTGAGCCACCTAA+CGG - chr1.1:76589552-76589571 MS.gene76822:intron 45.0%
! AGCTTTCTTTGAAGGGGACA+CGG - chr1.1:76589533-76589552 MS.gene76822:intron 45.0%
! AGGGGCATAGCTTTCTTTGA+AGG - chr1.1:76589525-76589544 MS.gene76822:intron 45.0%
! GCAATATAGGTTGGGAGTGA+TGG + chr1.1:76590301-76590320 None:intergenic 45.0%
! GGGCATAGCTTTCTTTGAAG+GGG - chr1.1:76589527-76589546 MS.gene76822:intron 45.0%
! TATCGTCCGACAACCACTTT+TGG - chr1.1:76592418-76592437 MS.gene76822:CDS 45.0%
! TGGATGTCAATCTAGGACAG+AGG - chr1.1:76590988-76591007 MS.gene76822:CDS 45.0%
! TGTCAATCTAGGACAGAGGT+TGG - chr1.1:76590992-76591011 MS.gene76822:CDS 45.0%
! TTGCTGTGAAAGTGTGGATC+AGG + chr1.1:76592581-76592600 None:intergenic 45.0%
!! AAAGTGGGTACCGACATACA+TGG - chr1.1:76590688-76590707 MS.gene76822:CDS 45.0%
!! AAGTGGGTACCGACATACAT+GGG - chr1.1:76590689-76590708 MS.gene76822:CDS 45.0%
!! ATGGGGGATGTCTTTTTAGC+TGG - chr1.1:76590707-76590726 MS.gene76822:CDS 45.0%
!! GCAGTATCTAGCTTTGGATG+AGG - chr1.1:76590052-76590071 MS.gene76822:intron 45.0%
!! GTCAATGAAGAGCATCACAC+GGG - chr1.1:76589477-76589496 MS.gene76822:CDS 45.0%
!! TAGCTTTGGATGAGGGAGAT+GGG - chr1.1:76590060-76590079 MS.gene76822:intron 45.0%
!! TCTTGAGTGTCGACAAGTAC+AGG + chr1.1:76591649-76591668 None:intergenic 45.0%
!!! ATGTCGGTACCCACTTTTTC+CGG + chr1.1:76590685-76590704 None:intergenic 45.0%
ACTGGTTGCTTCCCCTAAGA+GGG - chr1.1:76589506-76589525 MS.gene76822:intron 50.0%
AGGACATGGCTTAGAGCGAT+GGG - chr1.1:76590374-76590393 MS.gene76822:intron 50.0%
ATGCCAAATTCGCGTGCTCT+AGG - chr1.1:76589694-76589713 MS.gene76822:intron 50.0%
CACTTGAACAACCGCAACGT+TGG + chr1.1:76591168-76591187 None:intergenic 50.0%
GAAAGCTATGCCCCTCTTAG+GGG + chr1.1:76589520-76589539 None:intergenic 50.0%
GGAGTAACACCTGAGTCTGA+TGG - chr1.1:76589720-76589739 MS.gene76822:intron 50.0%
GGTACTCAGCAGAATGTGCA+AGG - chr1.1:76591907-76591926 MS.gene76822:CDS 50.0%
GGTGCAGAAACTGGCAACAA+TGG - chr1.1:76591421-76591440 MS.gene76822:CDS 50.0%
GTTCATGTAGGGAGGGCAAT+TGG - chr1.1:76592393-76592412 MS.gene76822:CDS 50.0%
TCAGCAGAATGTGCAAGGAC+TGG - chr1.1:76591912-76591931 MS.gene76822:CDS 50.0%
TTCACACTGTCGGAACGTTG+AGG + chr1.1:76590743-76590762 None:intergenic 50.0%
! CAGAGGGCAGTATCTAGCTT+TGG - chr1.1:76590046-76590065 MS.gene76822:intron 50.0%
! TCTAGGACAGAGGTTGGAGA+TGG - chr1.1:76590998-76591017 MS.gene76822:CDS 50.0%
! TTGGAACGAGTTGAGCTCAG+AGG - chr1.1:76591078-76591097 MS.gene76822:CDS 50.0%
!! AATGAAGAGCATCACACGGG+TGG - chr1.1:76589480-76589499 MS.gene76822:CDS 50.0%
!! AGTGGGTACCGACATACATG+GGG - chr1.1:76590690-76590709 MS.gene76822:CDS 50.0%
!! ATGGGTTGGTTCATGTAGGG+AGG - chr1.1:76592385-76592404 MS.gene76822:CDS 50.0%
!! CTAGCTTTGGATGAGGGAGA+TGG - chr1.1:76590059-76590078 MS.gene76822:intron 50.0%
!! GTTGAAGTGTTGGGTGTAGC+TGG - chr1.1:76590968-76590987 MS.gene76822:CDS 50.0%
!! TGGGTTGGTTCATGTAGGGA+GGG - chr1.1:76592386-76592405 MS.gene76822:CDS 50.0%
!!! CCGAGCCATGATGGGTATTT+TGG - chr1.1:76592264-76592283 MS.gene76822:CDS 50.0%
ACATGGCTTAGAGCGATGGG+AGG - chr1.1:76590377-76590396 MS.gene76822:intron 55.0%
ACTGTCGGAACGTTGAGGTG+TGG + chr1.1:76590738-76590757 None:intergenic 55.0%
CATGGCTTAGAGCGATGGGA+GGG - chr1.1:76590378-76590397 MS.gene76822:intron 55.0%
CTATGGCTCCGAGCCATGAT+GGG - chr1.1:76592256-76592275 MS.gene76822:CDS 55.0%
CTGCTCCTACCATCAGACTC+AGG + chr1.1:76589732-76589751 None:intergenic 55.0%
CTGGTTGCTTCCCCTAAGAG+GGG - chr1.1:76589507-76589526 MS.gene76822:intron 55.0%
GAGGACATGGCTTAGAGCGA+TGG - chr1.1:76590373-76590392 MS.gene76822:intron 55.0%
GGGAGATGGGCAAGTTATGC+TGG - chr1.1:76590073-76590092 MS.gene76822:intron 55.0%
TCAACACAGCATGCAAGGCC+TGG - chr1.1:76592078-76592097 MS.gene76822:CDS 55.0%
TCTATGGCTCCGAGCCATGA+TGG - chr1.1:76592255-76592274 MS.gene76822:CDS 55.0%
! CACTGGTTGCTTCCCCTAAG+AGG - chr1.1:76589505-76589524 MS.gene76822:intron 55.0%
!! GTGGGTACCGACATACATGG+GGG - chr1.1:76590691-76590710 MS.gene76822:CDS 55.0%
GCATCACACGGGTGGTGCAC+TGG - chr1.1:76589488-76589507 MS.gene76822:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 76589465 76592619 76589465 ID=MS.gene76822
chr1.1 mRNA 76589465 76592619 76589465 ID=MS.gene76822.t1;Parent=MS.gene76822
chr1.1 exon 76591900 76592619 76591900 ID=MS.gene76822.t1.exon1;Parent=MS.gene76822.t1
chr1.1 CDS 76591900 76592619 76591900 ID=cds.MS.gene76822.t1;Parent=MS.gene76822.t1
chr1.1 exon 76590556 76591539 76590556 ID=MS.gene76822.t1.exon2;Parent=MS.gene76822.t1
chr1.1 CDS 76590556 76591539 76590556 ID=cds.MS.gene76822.t1;Parent=MS.gene76822.t1
chr1.1 exon 76590400 76590456 76590400 ID=MS.gene76822.t1.exon3;Parent=MS.gene76822.t1
chr1.1 CDS 76590400 76590456 76590400 ID=cds.MS.gene76822.t1;Parent=MS.gene76822.t1
chr1.1 exon 76590151 76590219 76590151 ID=MS.gene76822.t1.exon4;Parent=MS.gene76822.t1
chr1.1 CDS 76590151 76590219 76590151 ID=cds.MS.gene76822.t1;Parent=MS.gene76822.t1
chr1.1 exon 76589985 76590056 76589985 ID=MS.gene76822.t1.exon5;Parent=MS.gene76822.t1
chr1.1 CDS 76589985 76590056 76589985 ID=cds.MS.gene76822.t1;Parent=MS.gene76822.t1
chr1.1 exon 76589631 76589681 76589631 ID=MS.gene76822.t1.exon6;Parent=MS.gene76822.t1
chr1.1 CDS 76589631 76589681 76589631 ID=cds.MS.gene76822.t1;Parent=MS.gene76822.t1
chr1.1 exon 76589465 76589512 76589465 ID=MS.gene76822.t1.exon7;Parent=MS.gene76822.t1
chr1.1 CDS 76589465 76589512 76589465 ID=cds.MS.gene76822.t1;Parent=MS.gene76822.t1
Gene Sequence

>MS.gene76822

ATGGGTGACTCTGTCAATGAAGAGCATCACACGGGTGGTGCACTGGTTGCTTCCCCTAAGAGGGGCATAGCTTTCTTTGAAGGGGACACGGATTTTGAGCCACCTAACGGCATTGAATTTGAAACTCATGAAGCAGCATATTCATTTTATCAAGAGTATGCCAAATCTATGGGATTCACCACTTCCATTAAAAACAGCAGACGATCAAAGAAGACCAAAGAATTTATTGATGCCAAATTCGCGTGCTCTAGGTATGGAGTAACACCTGAGTCTGATGGTAGGAGCAGTCGAAGATCGAGTGTAAAGAAGACAGATTGCAAAGCTTGCATGCACGTGAAGAAAAACCCAGATGGGAAATGGAACATTTTTGAATTTATAAAGGATCATAATCATGAACTTTTACCAGCTTTGGCATATCATTTTCGGATTCATGGAAACGTGAAGTTAGCTGACAAGAATAATATTGATATCTTGCATGCTGTTAGTGAACGTACCCGAAAGATGTATGTTGAAATGTCTAGACAATCTGGTGGCTGTCAAAACATTGGGTCAATCATGGGTGATACGAGTTATCAGTTTGACAGAGGGCAGTATCTAGCTTTGGATGAGGGAGATGGGCAAGTTATGCTGGAGTATTTCAAGCATATTCAAAAGGAGGATCCCAACTTCTTCTATTCTATAGATTTAAACGAGGAACAACGTTTAAGAAATATATTTTGGGTTGATTCAAAAAGCATCGATGATTACCTTAGCTTTAATGATGCAGTTTCATTTGATACTTCCTACATAAAAAGCAACGATAAGTTGCCTTTTGCTCCTTTTGTTGGAGTGAACCATCACTCCCAACCTATATTGCTTGGATGTGCATTGGTTGCTGATGAGACTAAGCCCACTTTTGTTTGGTTACTGAGGACATGGCTTAGAGCGATGGGAGGGCAAGCTCCCAAAGTTATAGTCACTGATCAAGACAAAGCCTTGAAGGAAGCAATTGAAGAAGTCTTCCCAAGTGTACGTCATTGCTTTTCTCTTTGTCACATATTGGAAAAGATACCTGAAAATCTGTCTTTTGTGATAAAACAGTACAAGAACTTCTTGCCAAAGTTTAAGAATTGCATTTTTAAGTCCTGGACAGATGAACAGTTTGACATGAGATGGTGGGAAATAGTGACTATATTTGAACTCCATGATGATGTTTGGTTTCACTCATTGTACGAAGACCGGAAAAAGTGGGTACCGACATACATGGGGGATGTCTTTTTAGCTGGAATGTCCACACCTCAACGTTCCGACAGTGTGAACTCTTTCTTTGACAAATACATTCATAAGAAAATCACCCTTAAAGAGTTTGTGAAACAGTATAGGTTAATTCTTCTGAATAGGTATGATGAGGAAGAAATCGCAGATTTTGATACATTGCACAAACAACCTGCACTTAAATCTCCTTCACCTTGGGAAAAACAAATGTCAACAATTTATACACATGCAATATTTAAGAAATTCCAAGTTGAAGTGTTGGGTGTAGCTGGATGTCAATCTAGGACAGAGGTTGGAGATGGAACTGTTGTGAGATATATAGTTCAAGATTACGAGAAGGATGAAGAGTTTTTGGTAACTTGGAACGAGTTGAGCTCAGAGGTCTCTTGCTTCTGTCGATTGTTCGAATATAAAGGTTTCCTTTGCAGACATGCATTGAGTGTTCTCCAACGTTGCGGTTGTTCAAGTGTTCCATCTCATTATATCATGAAGAGATGGACCAAAGATGCCAAAATTAGGGAACCTGTAGTAGATAGGACACAAAGGATACAAACTAGGCCTCAACGTTATAATGATGTGTGCAAACGAAGTATTGCGTTGAGTGAAGAAGGATCATCATCCGAAGAGAGTTATAATGTTGCTTTGCGCGCGCTTGTTGATGCTTTGAAGAACTGTGTACTTGTAAATAACTCTAACGACAATGGTGCAGAAACTGGCAACAATGGTTACAGTCTTCGCGAAGCAGAAGAATATCAGAGTACCCTTGCTTCAAAACCAAGTAAGAAGAGGAACACAACTAGGAAAAGAAAGGTCAGTTCTGGTAATGTGGTTTTTGTGCTTACGTGTTAAGTTGTTTTGGCTTTCTAGCATTTAAAAGATCAGGAAATTGATACGAGAATCACTTTATAGGTGCAACAAGAGCAGAGTCCTGTACTTGTCGACACTCAAGATACCCTGCAGCAAATGGTTTGTGTTTCCTCTTTTTTCATTCATGATCTGTTTTAGATTATACAAATAAGCATGGTACATCCATCCTCTTGAGAATTGCATTTCTATTTTCATGAATTCCTACTGCTTGCATTGCATCAAGGCTGAAAAGAGATCCATAGCATGCGCTTCATGTAACATGTGCTTTCGTTCTTTTAGGATAATCTTAGCTCGGATGCAATTGCCCTTAATGGATATTATGGTACTCAGCAGAATGTGCAAGGACTGGTAAATTTACATGTTAACCATCAAATGATTACAATGTTCTGTATTCTAAGAACTAAAAGTAATGCTTAATAGATTGTAATTTTGGTTTCTGTAGCATGTACAGTTGAATTTAATGGAGCCACCTCATGATGGTTACTATGTTAATCAACACAGCATGCAAGGCCTGGTAAGTTGTCCTAATCATGAATATAATCTTCTGATACGATTATCTTATATAATTAATTATTAATTATAAAGGAATAAGATTATTTATTAATTGTATTTCAAAAAAAAAAATTATTTATTAAATTGATATTCATATCGTTGTAGGGTCCATTGAATTCTATGGCTCCGAGCCATGATGGGTATTTTGGAACACAACAAAGCATTCATGGGATGGTAGAGTACTTTCCTATGAAATTATTGGGAAATTATATTAATTAACATTAATTATGATACAAGTTTGCTAACTATGGGTTGGTTCATGTAGGGAGGGCAATTGGAGTATCGTCCGACAACCACTTTTGGATATAGCCTTCAGGTTTGTTCATGACATGTACCGTATACTTAGTTACTTATTAGCATTTGAACTTGGAGATTTGAATAGAATAATTTGTGCTTGGTTTTCACCGTCTGTTTGCACATAACCTTAATTGTAGGATGAGCCTGATCCACACTTTCACAGCAACAGTTCAAGAAATACTTAG
Protein sequence

>MS.gene76822.t1

MGDSVNEEHHTGGALVASPKRGIAFFEGDTDFEPPNGIEFETHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDGRSSRRSSVKKTDCKACMHVKKNPDGKWNIFEFIKDHNHELLPALAYHFRIHGNVKLADKNNIDILHAVSERTRKMYVEMSRQSGGCQNIGSIMGDTSYQFDRGQYLALDEGDGQVMLEYFKHIQKEDPNFFYSIDLNEEQRLRNIFWYKNFLPKFKNCIFKSWTDEQFDMRWWEIVTIFELHDDVWFHSLYEDRKKWVPTYMGDVFLAGMSTPQRSDSVNSFFDKYIHKKITLKEFVKQYRLILLNRYDEEEIADFDTLHKQPALKSPSPWEKQMSTIYTHAIFKKFQVEVLGVAGCQSRTEVGDGTVVRYIVQDYEKDEEFLVTWNELSSEVSCFCRLFEYKGFLCRHALSVLQRCGCSSVPSHYIMKRWTKDAKIREPVVDRTQRIQTRPQRYNDVCKRSIALSEEGSSSEESYNVALRALVDALKNCVLVNNSNDNGAETGNNGYSLREAEEYQSTLASKPSKKRNTTRKRKVQQEQSPVLVDTQDTLQQMDNLSSDAIALNGYYGTQQNVQGLHVQLNLMEPPHDGYYVNQHSMQGLGGQLEYRPTTTFGYSLQDEPDPHFHSNSSRNT