Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76985.t1 | XP_003619685.2 | 95 | 662 | 32 | 1 | 1 | 661 | 1 | 662 | 0.00E+00 | 1181 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76985.t1 | Q9FHM4 | 54.8 | 679 | 267 | 9 | 9 | 665 | 8 | 668 | 1.8e-178 | 627.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76985.t1 | G7KNR9 | 95.0 | 662 | 32 | 1 | 1 | 661 | 1 | 662 | 0.0e+00 | 1181.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052447 | MS.gene76985 | 0.80798 | 3.88E-50 | -1.69E-46 |
| MS.gene05329 | MS.gene76985 | 0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene76985 | 0.804158 | 2.47E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76985.t1 | MTR_6g061690 | 94.775 | 689 | 35 | 1 | 1 | 688 | 1 | 689 | 0.0 | 1317 |
| MS.gene76985.t1 | MTR_1g076700 | 66.999 | 703 | 207 | 9 | 1 | 684 | 1 | 697 | 0.0 | 888 |
| MS.gene76985.t1 | MTR_7g075220 | 48.251 | 686 | 302 | 13 | 10 | 684 | 319 | 962 | 1.20e-179 | 538 |
| MS.gene76985.t1 | MTR_5g093860 | 50.382 | 524 | 241 | 8 | 13 | 521 | 12 | 531 | 8.28e-160 | 473 |
| MS.gene76985.t1 | MTR_1g038840 | 49.808 | 522 | 238 | 8 | 15 | 519 | 15 | 529 | 1.14e-153 | 459 |
| MS.gene76985.t1 | MTR_1g038840 | 48.992 | 496 | 229 | 8 | 41 | 519 | 1 | 489 | 8.18e-140 | 421 |
| MS.gene76985.t1 | MTR_8g041400 | 41.828 | 569 | 293 | 10 | 15 | 561 | 13 | 565 | 2.79e-135 | 410 |
| MS.gene76985.t1 | MTR_3g085440 | 43.750 | 512 | 275 | 8 | 14 | 516 | 17 | 524 | 1.43e-132 | 404 |
| MS.gene76985.t1 | MTR_3g085440 | 44.125 | 417 | 226 | 4 | 14 | 424 | 17 | 432 | 1.15e-108 | 336 |
| MS.gene76985.t1 | MTR_8g023220 | 35.260 | 519 | 289 | 12 | 8 | 505 | 5 | 497 | 2.36e-80 | 265 |
| MS.gene76985.t1 | MTR_4g077600 | 88.889 | 54 | 6 | 0 | 25 | 78 | 185 | 238 | 4.95e-25 | 104 |
| MS.gene76985.t1 | MTR_8g032090 | 48.352 | 91 | 43 | 1 | 244 | 334 | 202 | 288 | 1.75e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76985.t1 | AT5G51600 | 56.547 | 695 | 253 | 10 | 9 | 684 | 8 | 672 | 0.0 | 694 |
| MS.gene76985.t1 | AT3G60840 | 46.460 | 678 | 315 | 15 | 14 | 684 | 13 | 649 | 0.0 | 537 |
| MS.gene76985.t1 | AT5G62250 | 55.109 | 548 | 219 | 8 | 12 | 541 | 5 | 543 | 6.01e-179 | 521 |
| MS.gene76985.t1 | AT5G62250 | 55.109 | 548 | 219 | 8 | 12 | 541 | 5 | 543 | 6.01e-179 | 521 |
| MS.gene76985.t1 | AT4G26760 | 47.007 | 568 | 279 | 7 | 13 | 566 | 12 | 571 | 5.60e-165 | 486 |
| MS.gene76985.t1 | AT5G55230 | 50.860 | 523 | 239 | 7 | 13 | 521 | 12 | 530 | 3.53e-163 | 482 |
| MS.gene76985.t1 | AT5G55230 | 50.860 | 523 | 239 | 7 | 13 | 521 | 12 | 530 | 3.53e-163 | 482 |
| MS.gene76985.t1 | AT1G14690 | 45.439 | 581 | 284 | 9 | 15 | 566 | 16 | 592 | 1.98e-159 | 473 |
| MS.gene76985.t1 | AT1G14690 | 45.439 | 581 | 284 | 9 | 15 | 566 | 16 | 592 | 1.98e-159 | 473 |
| MS.gene76985.t1 | AT5G55230 | 47.849 | 558 | 244 | 8 | 13 | 527 | 12 | 565 | 2.40e-157 | 468 |
| MS.gene76985.t1 | AT2G01910 | 46.182 | 537 | 268 | 6 | 15 | 532 | 16 | 550 | 4.25e-155 | 462 |
| MS.gene76985.t1 | AT2G01910 | 45.525 | 514 | 253 | 7 | 41 | 532 | 1 | 509 | 1.03e-140 | 424 |
| MS.gene76985.t1 | AT2G38720 | 41.088 | 533 | 289 | 6 | 20 | 531 | 12 | 540 | 3.27e-124 | 380 |
| MS.gene76985.t1 | AT1G27920 | 39.560 | 546 | 314 | 8 | 14 | 546 | 17 | 559 | 1.81e-120 | 371 |
| MS.gene76985.t1 | AT1G27920 | 40.665 | 391 | 224 | 5 | 14 | 397 | 17 | 406 | 2.61e-87 | 280 |
Find 129 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTATTTGTTTGCTCAATT+TGG | 0.173956 | 6.1:+56832900 | None:intergenic |
| AGATCTAGCAACATCATTAT+TGG | 0.227899 | 6.1:-56834749 | MS.gene76985:CDS |
| TCCTTCCGAATTTCCTAAAC+TGG | 0.255906 | 6.1:+56834950 | None:intergenic |
| CTTGCACTCTGGGCCTTTGA+AGG | 0.274310 | 6.1:+56833046 | None:intergenic |
| GGTATATCAAACGAGATTTC+TGG | 0.281990 | 6.1:-56835308 | MS.gene76985:CDS |
| GCAAAATGAAAGAGCTTGTT+TGG | 0.282105 | 6.1:-56834471 | MS.gene76985:CDS |
| GTTGAAGAGATGGTAGTAAA+AGG | 0.288447 | 6.1:+56832086 | None:intergenic |
| AGTTCTCTCTGTTCGGTACT+TGG | 0.308093 | 6.1:-56835008 | MS.gene76985:CDS |
| TACGGGTCGCTCTCCCATTT+CGG | 0.324418 | 6.1:+56835707 | None:intergenic |
| ATAGGAACTGACACTGTCTT+TGG | 0.324482 | 6.1:+56831867 | None:intergenic |
| CATTTGGTGCTGGAATTGTT+CGG | 0.339097 | 6.1:-56832136 | MS.gene76985:CDS |
| TCATCCCAGTTTAGGAAATT+CGG | 0.354379 | 6.1:-56834955 | MS.gene76985:CDS |
| CACTTTAAGTTCTCTCTGTT+CGG | 0.361415 | 6.1:-56835015 | MS.gene76985:CDS |
| AGCGAAGTTCATCCCAGTTT+AGG | 0.366095 | 6.1:-56834963 | MS.gene76985:CDS |
| CCTACGAGAAAATACTCATT+TGG | 0.371490 | 6.1:-56832152 | MS.gene76985:CDS |
| TCTATTAGCTGCACTTCCAT+TGG | 0.371706 | 6.1:+56833006 | None:intergenic |
| ATCACTTCTTCAAGAACTTC+AGG | 0.375079 | 6.1:-56835993 | MS.gene76985:intron |
| TACAGCTATCTGTTCCGAAA+TGG | 0.375211 | 6.1:-56835721 | MS.gene76985:CDS |
| CTTTGAACTAGACTTGGAAT+AGG | 0.375865 | 6.1:-56831688 | None:intergenic |
| ATTGGAACTCTGGAATTTGA+TGG | 0.376250 | 6.1:-56834731 | MS.gene76985:CDS |
| AGATAATATGGCATGAAGTT+GGG | 0.383648 | 6.1:-56835881 | MS.gene76985:CDS |
| CTATTAGCTGCACTTCCATT+GGG | 0.389728 | 6.1:+56833007 | None:intergenic |
| AACTAAAGCCAATTGGCTTA+TGG | 0.394727 | 6.1:+56834905 | None:intergenic |
| GGTATCATTATTTACACTCC+TGG | 0.395158 | 6.1:+56834926 | None:intergenic |
| TAGATAATATGGCATGAAGT+TGG | 0.397238 | 6.1:-56835882 | MS.gene76985:CDS |
| GCCACGACTCCGGCTCATTT+AGG | 0.399726 | 6.1:-56831837 | MS.gene76985:CDS |
| CTTGTAGAACTAAAGCCAAT+TGG | 0.403415 | 6.1:+56834898 | None:intergenic |
| TTTGAACTAGACTTGGAATA+GGG | 0.403478 | 6.1:-56831687 | None:intergenic |
| ACCATTTCATGTTTCTCATC+AGG | 0.405050 | 6.1:-56832869 | MS.gene76985:intron |
| TCAGGACTTGAAGAAACTTC+AGG | 0.409056 | 6.1:-56833113 | MS.gene76985:intron |
| GTGGTTTCAGCTTGCGGAAG+AGG | 0.418568 | 6.1:+56836022 | None:intergenic |
| GAAGTTCAAGAGCAGATTCA+TGG | 0.423085 | 6.1:-56835329 | MS.gene76985:CDS |
| TTTGCATTTCCTCCAGCTCC+AGG | 0.424702 | 6.1:+56835384 | None:intergenic |
| CTACTTCTTTGAACTAGACT+TGG | 0.425597 | 6.1:-56831694 | MS.gene76985:CDS |
| AGCAGAAGTATCTAGATTAG+AGG | 0.429965 | 6.1:-56834506 | MS.gene76985:CDS |
| GGTACAAATGATAGCAGAAC+AGG | 0.438719 | 6.1:-56833092 | MS.gene76985:CDS |
| TAGATAAAGCTAATTGCTCT+AGG | 0.440623 | 6.1:-56835785 | MS.gene76985:CDS |
| ATTTGGTGCTGGAATTGTTC+GGG | 0.440662 | 6.1:-56832135 | MS.gene76985:CDS |
| GCACTTCCATTGGGTGTCCT+AGG | 0.441865 | 6.1:+56833016 | None:intergenic |
| TTGCACTCTGGGCCTTTGAA+GGG | 0.442373 | 6.1:+56833047 | None:intergenic |
| AAGTCTTCAGACAAGGTGTT+TGG | 0.442884 | 6.1:+56834631 | None:intergenic |
| TAATGATACCATAAGCCAAT+TGG | 0.445416 | 6.1:-56834913 | MS.gene76985:CDS |
| GCTAATAGAAGAGGTACCTT+TGG | 0.448984 | 6.1:-56832992 | MS.gene76985:CDS |
| GTAGTGGTAGTAGTGGAGAC+AGG | 0.453478 | 6.1:+56831894 | None:intergenic |
| ATCGAAAATGCTATTGAGTC+TGG | 0.455704 | 6.1:-56834382 | MS.gene76985:intron |
| GGAGTCGTGGCCGTATTCAT+AGG | 0.458536 | 6.1:+56831849 | None:intergenic |
| AAAAGCTTCCTCTTTGACTT+GGG | 0.461391 | 6.1:+56834224 | None:intergenic |
| CTTCAAGCATAGAAACTAAA+CGG | 0.462913 | 6.1:+56833488 | None:intergenic |
| TACTTTGCCAGTCTTTCTTG+TGG | 0.463339 | 6.1:+56832925 | None:intergenic |
| ACAACTTCATACACTTCAAA+AGG | 0.464054 | 6.1:-56835213 | MS.gene76985:CDS |
| CAACATCATTATTGGAACTC+TGG | 0.464253 | 6.1:-56834741 | MS.gene76985:CDS |
| ACAGCTATCTGTTCCGAAAT+GGG | 0.467871 | 6.1:-56835720 | MS.gene76985:CDS |
| TAGGAAATTCGGAAGGATCC+AGG | 0.468206 | 6.1:-56834944 | MS.gene76985:CDS |
| AGCTGAGAAAGCTCGTATCT+TGG | 0.469732 | 6.1:-56833843 | MS.gene76985:CDS |
| AAGTTTCCGCAATGACAAAT+CGG | 0.475112 | 6.1:+56835250 | None:intergenic |
| TAAAAGCTTCCTCTTTGACT+TGG | 0.477467 | 6.1:+56834223 | None:intergenic |
| TGGCTCGGTTACTTCATGTT+CGG | 0.478723 | 6.1:+56834651 | None:intergenic |
| ATCTTGGTGAACAAAATTCC+AGG | 0.480701 | 6.1:-56833827 | MS.gene76985:intron |
| TCAAAAGGCTAGAAGCTTGA+AGG | 0.482299 | 6.1:-56835426 | MS.gene76985:CDS |
| AGAGCTAGCAATGATTCTCC+TGG | 0.482951 | 6.1:-56835402 | MS.gene76985:CDS |
| TACACCGATTGAAGAGCAAC+AGG | 0.488060 | 6.1:-56834707 | MS.gene76985:CDS |
| ACCTGATGAGAAACATGAAA+TGG | 0.490127 | 6.1:+56832868 | None:intergenic |
| AGAAAATACTCATTTGGTGC+TGG | 0.491700 | 6.1:-56832146 | MS.gene76985:CDS |
| AACACCTGTTGCTCTTCAAT+CGG | 0.494691 | 6.1:+56834703 | None:intergenic |
| AATAGAAGAGGTACCTTTGG+AGG | 0.497332 | 6.1:-56832989 | MS.gene76985:CDS |
| TAATTCGTACCCGCTGTCTA+CGG | 0.499586 | 6.1:+56833428 | None:intergenic |
| GAAATTGCAGAGAATGCAAA+AGG | 0.499869 | 6.1:-56834862 | MS.gene76985:intron |
| GGAAGAGGATGATCGTTATG+AGG | 0.502043 | 6.1:+56836037 | None:intergenic |
| AGAGAGAACTTAAAGTGTGC+AGG | 0.506576 | 6.1:+56835021 | None:intergenic |
| AGCAATGATTCTCCTGGAGC+TGG | 0.506925 | 6.1:-56835396 | MS.gene76985:CDS |
| CCACATGTGGTTTCAGCTTG+CGG | 0.511048 | 6.1:+56836016 | None:intergenic |
| TCTAACCTGTCTATTATGTA+CGG | 0.511721 | 6.1:+56835689 | None:intergenic |
| AGTGTCAGTTCCTATGAATA+CGG | 0.512680 | 6.1:-56831859 | MS.gene76985:CDS |
| TTGAAGACTACATCTCATTA+CGG | 0.514693 | 6.1:-56833471 | MS.gene76985:CDS |
| GATTTGTAGAAAGACTCATT+TGG | 0.517078 | 6.1:-56834425 | MS.gene76985:CDS |
| CACTGTCTTTGGTGTAGTAG+TGG | 0.519233 | 6.1:+56831878 | None:intergenic |
| CAGCATGTGACGAAGAGTCT+TGG | 0.521246 | 6.1:-56834161 | MS.gene76985:CDS |
| ATTGCTCTAGGGCTCAAGTT+AGG | 0.524542 | 6.1:-56835773 | MS.gene76985:CDS |
| AGCAAGAACGCCGTAGACAG+CGG | 0.526169 | 6.1:-56833438 | MS.gene76985:CDS |
| TCTAGAAGTATACAGAAGAA+AGG | 0.526922 | 6.1:-56835808 | MS.gene76985:CDS |
| AAGAGGTACCTTTGGAGGAT+CGG | 0.527379 | 6.1:-56832984 | MS.gene76985:CDS |
| TGGTGTAGTAGTGGTAGTAG+TGG | 0.527504 | 6.1:+56831887 | None:intergenic |
| TCAAGCTCCACAAGAAAGAC+TGG | 0.530055 | 6.1:-56832932 | MS.gene76985:CDS |
| TACCTCTACCAGCATTGTAT+CGG | 0.532890 | 6.1:+56833885 | None:intergenic |
| GATAATATGGCATGAAGTTG+GGG | 0.542348 | 6.1:-56835880 | MS.gene76985:CDS |
| TTCAGACAAGGTGTTTGGCT+CGG | 0.543524 | 6.1:+56834636 | None:intergenic |
| TACTTGAAAATGTTGAGAAG+TGG | 0.545110 | 6.1:-56834188 | MS.gene76985:CDS |
| CCTTCCGAATTTCCTAAACT+GGG | 0.549391 | 6.1:+56834951 | None:intergenic |
| TGAGTTCATGCAGCTAGAAG+AGG | 0.549507 | 6.1:-56832194 | MS.gene76985:intron |
| GATGAAAACCGATACAATGC+TGG | 0.551215 | 6.1:-56833893 | MS.gene76985:CDS |
| AGCACCGAGTTTGTATATGA+TGG | 0.551324 | 6.1:-56833612 | MS.gene76985:CDS |
| AAGTCACCTCCTAAATGAGC+CGG | 0.556602 | 6.1:+56831828 | None:intergenic |
| TCCTAAATGAGCCGGAGTCG+TGG | 0.559530 | 6.1:+56831836 | None:intergenic |
| CTAACCTGTCTATTATGTAC+GGG | 0.563782 | 6.1:+56835690 | None:intergenic |
| AACCGATACAATGCTGGTAG+AGG | 0.566080 | 6.1:-56833887 | MS.gene76985:CDS |
| GCAAGAACGCCGTAGACAGC+GGG | 0.568991 | 6.1:-56833437 | MS.gene76985:intron |
| GCAGAGTGATCGTATGAAGA+AGG | 0.570370 | 6.1:-56835054 | MS.gene76985:intron |
| GTAAAAGGTTGTCGAGTCAA+AGG | 0.571972 | 6.1:+56832101 | None:intergenic |
| GATAGCTGTAAGTTCTGCCT+CGG | 0.572279 | 6.1:+56835734 | None:intergenic |
| TCAGATTTCCCAAGTCAAAG+AGG | 0.575813 | 6.1:-56834232 | MS.gene76985:CDS |
| CGGGTCAAAGAGCCCTTCAA+AGG | 0.576170 | 6.1:-56833059 | MS.gene76985:CDS |
| AATGATTCTCCTGGAGCTGG+AGG | 0.577137 | 6.1:-56835393 | MS.gene76985:CDS |
| AACATGAAATGGTATCGTCT+AGG | 0.577424 | 6.1:+56832879 | None:intergenic |
| TATGAATACGGCCACGACTC+CGG | 0.578497 | 6.1:-56831847 | MS.gene76985:CDS |
| AGATAAAGCTAATTGCTCTA+GGG | 0.579317 | 6.1:-56835784 | MS.gene76985:CDS |
| ATGTGACGAAGAGTCTTGGC+TGG | 0.583285 | 6.1:-56834157 | MS.gene76985:CDS |
| TCATACACTTCAAAAGGAGA+AGG | 0.589653 | 6.1:-56835207 | MS.gene76985:intron |
| TGATGATATTGTTGAAGAGA+TGG | 0.589854 | 6.1:+56832076 | None:intergenic |
| GCGACCCGTACATAATAGAC+AGG | 0.596125 | 6.1:-56835694 | MS.gene76985:intron |
| CATCTCATTACGGCAAGAGA+AGG | 0.599700 | 6.1:-56833461 | MS.gene76985:CDS |
| GCAGAACAGGAAGTACTGTA+CGG | 0.599881 | 6.1:-56833079 | MS.gene76985:CDS |
| TGAAGAAAATCGAACTCCAA+AGG | 0.604071 | 6.1:-56831928 | MS.gene76985:CDS |
| ACGACTCCGGCTCATTTAGG+AGG | 0.608772 | 6.1:-56831834 | MS.gene76985:intron |
| TGCAAAAGCGAAAGCATGAG+CGG | 0.609841 | 6.1:-56835367 | MS.gene76985:CDS |
| GGAAGTGCAGCTAATAGAAG+AGG | 0.613954 | 6.1:-56833001 | MS.gene76985:CDS |
| AAAGCGCCTAGGACACCCAA+TGG | 0.614735 | 6.1:-56833022 | MS.gene76985:CDS |
| CAGAACAGGAAGTACTGTAC+GGG | 0.614915 | 6.1:-56833078 | MS.gene76985:CDS |
| TTGAAGAAGTGATCCACATG+TGG | 0.617788 | 6.1:+56836003 | None:intergenic |
| GCAAGAAATTGCTGATTCCG+AGG | 0.617850 | 6.1:-56835751 | MS.gene76985:CDS |
| CCCAGTTTAGGAAATTCGGA+AGG | 0.621313 | 6.1:-56834951 | MS.gene76985:CDS |
| TACACCATCATATACAAACT+CGG | 0.631524 | 6.1:+56833608 | None:intergenic |
| CCGCAAGCTGAAACCACATG+TGG | 0.649740 | 6.1:-56836016 | MS.gene76985:CDS |
| TGACGAAGAGTCTTGGCTGG+AGG | 0.661716 | 6.1:-56834154 | MS.gene76985:CDS |
| AGAGTGCAAGAAAAGCGCCT+AGG | 0.663387 | 6.1:-56833033 | MS.gene76985:CDS |
| ATGAAACCGATTTGTCATTG+CGG | 0.682216 | 6.1:-56835256 | MS.gene76985:CDS |
| GGGATAGTAGTAGTAGTGAG+TGG | 0.683729 | 6.1:+56831972 | None:intergenic |
| TATCCCGAAAACAGACACGT+TGG | 0.693797 | 6.1:-56831955 | MS.gene76985:CDS |
| ATTAATGAAGTCTTCAGACA+AGG | 0.698835 | 6.1:+56834624 | None:intergenic |
| TTAGTTCTACAAGAACTGCG+AGG | 0.740885 | 6.1:-56834888 | MS.gene76985:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAACAGAAAAACAAAA+AGG | + | chr6.1:56834914-56834933 | None:intergenic | 15.0% |
| !! | AATAAACAGAAAAACAAAAA+GGG | + | chr6.1:56834913-56834932 | None:intergenic | 15.0% |
| !! | AATGATTATATTGTAAACTT+CGG | - | chr6.1:56831791-56831810 | MS.gene76985:intron | 15.0% |
| !! | ATAAATACAACTTACAATTA+AGG | + | chr6.1:56833944-56833963 | None:intergenic | 15.0% |
| !!! | TCTTTTTTTTTGAGTAAATA+AGG | - | chr6.1:56835978-56835997 | MS.gene76985:intron | 15.0% |
| !! | AGGTTCTATAATTAACTATA+GGG | + | chr6.1:56834521-56834540 | None:intergenic | 20.0% |
| !! | ATATATTGAATATTCCTTTG+AGG | - | chr6.1:56835936-56835955 | MS.gene76985:intron | 20.0% |
| !! | ATTATCTGTGAATTTAGTAT+AGG | + | chr6.1:56834467-56834486 | None:intergenic | 20.0% |
| !! | ATTTAAATTGCAGAAAAAGT+TGG | + | chr6.1:56831774-56831793 | None:intergenic | 20.0% |
| !! | GAGAAAAAAAAATCATGAAA+TGG | + | chr6.1:56832926-56832945 | None:intergenic | 20.0% |
| !! | GAGAAACACAAATAAATTAT+GGG | + | chr6.1:56835480-56835499 | None:intergenic | 20.0% |
| !! | GTATTTATAGAATATCATCA+TGG | - | chr6.1:56833956-56833975 | MS.gene76985:intron | 20.0% |
| !! | TGAGAAACACAAATAAATTA+TGG | + | chr6.1:56835481-56835500 | None:intergenic | 20.0% |
| !! | TTTAAACAAGAAAGAAAGAA+TGG | + | chr6.1:56833411-56833430 | None:intergenic | 20.0% |
| !!! | ATCACTCAATATGATATTTT+GGG | + | chr6.1:56832634-56832653 | None:intergenic | 20.0% |
| !!! | ATGGTATATTTTCTTTTATC+CGG | - | chr6.1:56834592-56834611 | MS.gene76985:intron | 20.0% |
| !!! | GACTAGATAATAACTTATTT+TGG | + | chr6.1:56834355-56834374 | None:intergenic | 20.0% |
| !!! | GTATTTTAAATGATAACTGT+GGG | + | chr6.1:56835264-56835283 | None:intergenic | 20.0% |
| !!! | TACATTTACATTTTTCTTAG+CGG | + | chr6.1:56835089-56835108 | None:intergenic | 20.0% |
| !!! | TATCACTCAATATGATATTT+TGG | + | chr6.1:56832635-56832654 | None:intergenic | 20.0% |
| !!! | TGTATTTTAAATGATAACTG+TGG | + | chr6.1:56835265-56835284 | None:intergenic | 20.0% |
| !!! | TTTCATGATTTTTTTTTCTC+TGG | - | chr6.1:56832926-56832945 | MS.gene76985:CDS | 20.0% |
| !!! | TTTTTCGAAACTAGATAATA+TGG | - | chr6.1:56831842-56831861 | MS.gene76985:CDS | 20.0% |
| !!! | TTTTTTTTGTTTGATGTTGT+TGG | - | chr6.1:56835417-56835436 | MS.gene76985:CDS | 20.0% |
| ! | AAATAGAAAAATGAAGAGAG+AGG | + | chr6.1:56832571-56832590 | None:intergenic | 25.0% |
| ! | AATAGAAAAATGAAGAGAGA+GGG | + | chr6.1:56832570-56832589 | None:intergenic | 25.0% |
| ! | AATCAAAGGTTAACATTAGA+TGG | + | chr6.1:56835216-56835235 | None:intergenic | 25.0% |
| ! | ATCAAAGGTTAACATTAGAT+GGG | + | chr6.1:56835215-56835234 | None:intergenic | 25.0% |
| ! | ATCTATTGAGTCAAAACTAA+AGG | + | chr6.1:56835015-56835034 | None:intergenic | 25.0% |
| ! | ATGTTATTGAACAACGTAAA+TGG | - | chr6.1:56833748-56833767 | MS.gene76985:intron | 25.0% |
| ! | CATGAATGAACAAATAATCT+TGG | + | chr6.1:56832268-56832287 | None:intergenic | 25.0% |
| ! | GAAAATATACCATTATTTGC+TGG | + | chr6.1:56834585-56834604 | None:intergenic | 25.0% |
| ! | GAGGTTCTATAATTAACTAT+AGG | + | chr6.1:56834522-56834541 | None:intergenic | 25.0% |
| ! | TAAATTCACAGATAATTCCA+TGG | - | chr6.1:56834471-56834490 | MS.gene76985:CDS | 25.0% |
| !! | AATATTCCTTTGAGGAAATA+AGG | - | chr6.1:56835944-56835963 | MS.gene76985:intron | 25.0% |
| !! | ACATTTACATTTTTCTTAGC+GGG | + | chr6.1:56835088-56835107 | None:intergenic | 25.0% |
| !!! | AGTTTTGACTCAATAGATAA+GGG | - | chr6.1:56835017-56835036 | MS.gene76985:CDS | 25.0% |
| !!! | GTTTCTCAATTACTGATTTA+CGG | - | chr6.1:56832087-56832106 | MS.gene76985:CDS | 25.0% |
| !!! | TAGTTTTGACTCAATAGATA+AGG | - | chr6.1:56835016-56835035 | MS.gene76985:CDS | 25.0% |
| !!! | TTTTTTGAGTAAATAAGGCT+TGG | - | chr6.1:56835983-56836002 | MS.gene76985:intron | 25.0% |
| AAACTGTGCGATGATAAATA+TGG | + | chr6.1:56833791-56833810 | None:intergenic | 30.0% | |
| AACTTCATGTATCAAGCTAA+GGG | + | chr6.1:56834401-56834420 | None:intergenic | 30.0% | |
| ACAACTTCATACACTTCAAA+AGG | - | chr6.1:56832522-56832541 | MS.gene76985:intron | 30.0% | |
| AGATAAAGCTAATTGCTCTA+GGG | - | chr6.1:56831951-56831970 | MS.gene76985:CDS | 30.0% | |
| AGATAATATGGCATGAAGTT+GGG | - | chr6.1:56831854-56831873 | MS.gene76985:CDS | 30.0% | |
| AGATCTAGCAACATCATTAT+TGG | - | chr6.1:56832986-56833005 | MS.gene76985:CDS | 30.0% | |
| ATTAATGAAGTCTTCAGACA+AGG | + | chr6.1:56833114-56833133 | None:intergenic | 30.0% | |
| CTCATAAATCGATTATGATC+TGG | - | chr6.1:56832955-56832974 | MS.gene76985:CDS | 30.0% | |
| CTTCAAGCATAGAAACTAAA+CGG | + | chr6.1:56834250-56834269 | None:intergenic | 30.0% | |
| GAATGAAAATGCTATGCTAT+TGG | + | chr6.1:56835127-56835146 | None:intergenic | 30.0% | |
| GATTTGTAGAAAGACTCATT+TGG | - | chr6.1:56833310-56833329 | MS.gene76985:intron | 30.0% | |
| GGTTATTTGTTTGCTCAATT+TGG | + | chr6.1:56834838-56834857 | None:intergenic | 30.0% | |
| GTCATAAGAAAACCTTGAAA+AGG | - | chr6.1:56834372-56834391 | MS.gene76985:intron | 30.0% | |
| TAATGATACCATAAGCCAAT+TGG | - | chr6.1:56832822-56832841 | MS.gene76985:intron | 30.0% | |
| TAATTAACTATAGGGCAACT+TGG | + | chr6.1:56834513-56834532 | None:intergenic | 30.0% | |
| TACACCATCATATACAAACT+CGG | + | chr6.1:56834130-56834149 | None:intergenic | 30.0% | |
| TACTTGAAAATGTTGAGAAG+TGG | - | chr6.1:56833547-56833566 | MS.gene76985:intron | 30.0% | |
| TAGATAAAGCTAATTGCTCT+AGG | - | chr6.1:56831950-56831969 | MS.gene76985:CDS | 30.0% | |
| TAGATAATATGGCATGAAGT+TGG | - | chr6.1:56831853-56831872 | MS.gene76985:CDS | 30.0% | |
| TATAAGCTACTGTAGAAAGA+AGG | - | chr6.1:56833143-56833162 | MS.gene76985:intron | 30.0% | |
| TCTAACCTGTCTATTATGTA+CGG | + | chr6.1:56832049-56832068 | None:intergenic | 30.0% | |
| TCTATGATTCCAGCAAATAA+TGG | - | chr6.1:56834573-56834592 | MS.gene76985:intron | 30.0% | |
| TGATGATATTGTTGAAGAGA+TGG | + | chr6.1:56835662-56835681 | None:intergenic | 30.0% | |
| TGTATCTATATACTGCTTGA+TGG | - | chr6.1:56832126-56832145 | MS.gene76985:CDS | 30.0% | |
| TTCTGAACTAAACAAACACT+CGG | + | chr6.1:56834022-56834041 | None:intergenic | 30.0% | |
| TTGAAGACTACATCTCATTA+CGG | - | chr6.1:56834264-56834283 | MS.gene76985:CDS | 30.0% | |
| TTTCTGTTTATTTGCATCTC+CGG | - | chr6.1:56834921-56834940 | MS.gene76985:CDS | 30.0% | |
| ! | AGAATCTTCGTCTAAAACAA+AGG | + | chr6.1:56835320-56835339 | None:intergenic | 30.0% |
| ! | ATTTTTATAGTCCGGTCAAA+AGG | - | chr6.1:56832294-56832313 | MS.gene76985:intron | 30.0% |
| ! | TCTAGAAGTATACAGAAGAA+AGG | - | chr6.1:56831927-56831946 | MS.gene76985:CDS | 30.0% |
| !! | AATTAAGGTCTAAAAGTACC+TGG | + | chr6.1:56833929-56833948 | None:intergenic | 30.0% |
| !! | TGTCTCTCATTTTTATAGTC+CGG | - | chr6.1:56832286-56832305 | MS.gene76985:intron | 30.0% |
| !! | TTATTGAAATGTCGCTTTCT+AGG | - | chr6.1:56834223-56834242 | MS.gene76985:CDS | 30.0% |
| !! | TTTTGACTCAATAGATAAGG+GGG | - | chr6.1:56835019-56835038 | MS.gene76985:CDS | 30.0% |
| !! | TTTTTGTTTGATGTTGTTGG+AGG | - | chr6.1:56835420-56835439 | MS.gene76985:CDS | 30.0% |
| !!! | GTTTTGACTCAATAGATAAG+GGG | - | chr6.1:56835018-56835037 | MS.gene76985:CDS | 30.0% |
| !!! | GTTTTTTATAAGGCTCTATG+TGG | - | chr6.1:56835373-56835392 | MS.gene76985:CDS | 30.0% |
| !!! | TTGATGGTGGGTTTTTTATA+AGG | - | chr6.1:56835363-56835382 | MS.gene76985:CDS | 30.0% |
| AAAAACAGTAGCATGGGAAA+AGG | - | chr6.1:56834095-56834114 | MS.gene76985:intron | 35.0% | |
| AAAATACAACCTCAGACTGT+TGG | - | chr6.1:56835277-56835296 | MS.gene76985:CDS | 35.0% | |
| AACAGGTATTCGACAATCAA+AGG | + | chr6.1:56835230-56835249 | None:intergenic | 35.0% | |
| AACATGAAATGGTATCGTCT+AGG | + | chr6.1:56834859-56834878 | None:intergenic | 35.0% | |
| AAGTAATAATTTCACGCAGG+TGG | - | chr6.1:56833205-56833224 | MS.gene76985:intron | 35.0% | |
| AAGTTGCTTCTATGTGACTA+GGG | - | chr6.1:56834416-56834435 | MS.gene76985:CDS | 35.0% | |
| AAGTTTCCGCAATGACAAAT+CGG | + | chr6.1:56832488-56832507 | None:intergenic | 35.0% | |
| AATATCACCTCAGCATCTAT+TGG | - | chr6.1:56834173-56834192 | MS.gene76985:CDS | 35.0% | |
| ACCATTTCATGTTTCTCATC+AGG | - | chr6.1:56834866-56834885 | MS.gene76985:CDS | 35.0% | |
| ACCTGATGAGAAACATGAAA+TGG | + | chr6.1:56834870-56834889 | None:intergenic | 35.0% | |
| AGAAAAGAAGATGCAGGTTT+AGG | + | chr6.1:56833436-56833455 | None:intergenic | 35.0% | |
| AGTCTGAGTCTGAAAAAGAT+AGG | - | chr6.1:56831878-56831897 | MS.gene76985:CDS | 35.0% | |
| AGTGTCAGTTCCTATGAATA+CGG | - | chr6.1:56835876-56835895 | MS.gene76985:CDS | 35.0% | |
| ATATTGCATGCATCTCTAAG+AGG | + | chr6.1:56834158-56834177 | None:intergenic | 35.0% | |
| ATCACTTCTTCAAGAACTTC+AGG | - | chr6.1:56831742-56831761 | MS.gene76985:intron | 35.0% | |
| ATCGAAAATGCTATTGAGTC+TGG | - | chr6.1:56833353-56833372 | MS.gene76985:intron | 35.0% | |
| ATCTTGGTGAACAAAATTCC+AGG | - | chr6.1:56833908-56833927 | MS.gene76985:intron | 35.0% | |
| CAACATCATTATTGGAACTC+TGG | - | chr6.1:56832994-56833013 | MS.gene76985:CDS | 35.0% | |
| CAACTTCATGTATCAAGCTA+AGG | + | chr6.1:56834402-56834421 | None:intergenic | 35.0% | |
| CAAGCACTTGTAAGAGATTT+AGG | + | chr6.1:56835514-56835533 | None:intergenic | 35.0% | |
| CAATTTGTCTGTCATTGCTA+TGG | + | chr6.1:56834070-56834089 | None:intergenic | 35.0% | |
| CCTACGAGAAAATACTCATT+TGG | - | chr6.1:56835583-56835602 | MS.gene76985:intron | 35.0% | |
| CGATGATAAATATGGCCTAT+GGG | + | chr6.1:56833783-56833802 | None:intergenic | 35.0% | |
| CGCTTATCATTAACAATGCA+CGG | - | chr6.1:56833685-56833704 | MS.gene76985:intron | 35.0% | |
| CTAACCTGTCTATTATGTAC+GGG | + | chr6.1:56832048-56832067 | None:intergenic | 35.0% | |
| CTACTTCTTTGAACTAGACT+TGG | - | chr6.1:56836041-56836060 | MS.gene76985:CDS | 35.0% | |
| CTTGTAGAACTAAAGCCAAT+TGG | + | chr6.1:56832840-56832859 | None:intergenic | 35.0% | |
| GAAAAAAAGAGCAGAGTTAG+AGG | - | chr6.1:56833286-56833305 | MS.gene76985:intron | 35.0% | |
| GAAATTGCAGAGAATGCAAA+AGG | - | chr6.1:56832873-56832892 | MS.gene76985:CDS | 35.0% | |
| GACTTCAAAAACAGTAGCAT+GGG | - | chr6.1:56834089-56834108 | MS.gene76985:intron | 35.0% | |
| GAGAAGTAATAATTTCACGC+AGG | - | chr6.1:56833202-56833221 | MS.gene76985:intron | 35.0% | |
| GATAATATGGCATGAAGTTG+GGG | - | chr6.1:56831855-56831874 | MS.gene76985:CDS | 35.0% | |
| GGTATATCAAACGAGATTTC+TGG | - | chr6.1:56832427-56832446 | MS.gene76985:intron | 35.0% | |
| GGTATCATTATTTACACTCC+TGG | + | chr6.1:56832812-56832831 | None:intergenic | 35.0% | |
| GTTGAAGAGATGGTAGTAAA+AGG | + | chr6.1:56835652-56835671 | None:intergenic | 35.0% | |
| TAAAAGCTTCCTCTTTGACT+TGG | + | chr6.1:56833515-56833534 | None:intergenic | 35.0% | |
| TAATTGTACGGTTGGATTGA+CGG | - | chr6.1:56833710-56833729 | MS.gene76985:intron | 35.0% | |
| TCATACACTTCAAAAGGAGA+AGG | - | chr6.1:56832528-56832547 | MS.gene76985:intron | 35.0% | |
| TCATCCCAGTTTAGGAAATT+CGG | - | chr6.1:56832780-56832799 | MS.gene76985:intron | 35.0% | |
| TGAAAATGCTATGCTATTGG+TGG | + | chr6.1:56835124-56835143 | None:intergenic | 35.0% | |
| TGAAGAAAATCGAACTCCAA+AGG | - | chr6.1:56835807-56835826 | MS.gene76985:CDS | 35.0% | |
| TGACTTCAAAAACAGTAGCA+TGG | - | chr6.1:56834088-56834107 | MS.gene76985:intron | 35.0% | |
| TGTGGGAGAATCTATAAAAC+AGG | + | chr6.1:56835247-56835266 | None:intergenic | 35.0% | |
| ! | AAAAGCTTCCTCTTTGACTT+GGG | + | chr6.1:56833514-56833533 | None:intergenic | 35.0% |
| ! | AACTAAAGCCAATTGGCTTA+TGG | + | chr6.1:56832833-56832852 | None:intergenic | 35.0% |
| ! | AATAGATAAGGGGGTTGTTT+TGG | - | chr6.1:56835028-56835047 | MS.gene76985:CDS | 35.0% |
| ! | ACAGGAATAGACTTTTCCTT+TGG | + | chr6.1:56835826-56835845 | None:intergenic | 35.0% |
| ! | ACGAATGAGACATTTTCTCT+TGG | + | chr6.1:56832454-56832473 | None:intergenic | 35.0% |
| ! | CACTTTAAGTTCTCTCTGTT+CGG | - | chr6.1:56832720-56832739 | MS.gene76985:intron | 35.0% |
| ! | CCAAATGAGTATTTTCTCGT+AGG | + | chr6.1:56835586-56835605 | None:intergenic | 35.0% |
| ! | GATTGAGTAGCTTTTGAATC+AGG | + | chr6.1:56834785-56834804 | None:intergenic | 35.0% |
| ! | GCAAAATGAAAGAGCTTGTT+TGG | - | chr6.1:56833264-56833283 | MS.gene76985:intron | 35.0% |
| ! | GTTCTACACTTGTTTCTTCT+AGG | - | chr6.1:56833820-56833839 | MS.gene76985:intron | 35.0% |
| ! | TATTGCATGCATCTCTAAGA+GGG | + | chr6.1:56834157-56834176 | None:intergenic | 35.0% |
| ! | TTAAAGTGTGCAGGTTTTCT+TGG | + | chr6.1:56832708-56832727 | None:intergenic | 35.0% |
| !! | AGAAAATACTCATTTGGTGC+TGG | - | chr6.1:56835589-56835608 | MS.gene76985:intron | 35.0% |
| !! | AGCAGAAGTATCTAGATTAG+AGG | - | chr6.1:56833229-56833248 | MS.gene76985:intron | 35.0% |
| !! | ATGAAACCGATTTGTCATTG+CGG | - | chr6.1:56832479-56832498 | MS.gene76985:intron | 35.0% |
| !! | ATTGGAACTCTGGAATTTGA+TGG | - | chr6.1:56833004-56833023 | MS.gene76985:CDS | 35.0% |
| !!! | ATATTTTGAGACAAAACGCG+AGG | + | chr6.1:56834541-56834560 | None:intergenic | 35.0% |
| AAAAATGAAGAGAGAGGGAG+AGG | + | chr6.1:56832565-56832584 | None:intergenic | 40.0% | |
| AAATATGGCCTATGGGAGTT+GGG | + | chr6.1:56833776-56833795 | None:intergenic | 40.0% | |
| AACACCTGTTGCTCTTCAAT+CGG | + | chr6.1:56833035-56833054 | None:intergenic | 40.0% | |
| AACATGTATCCAACAGTCTG+AGG | + | chr6.1:56835289-56835308 | None:intergenic | 40.0% | |
| ACAGCTATCTGTTCCGAAAT+GGG | - | chr6.1:56832015-56832034 | MS.gene76985:CDS | 40.0% | |
| ACGCATAACTACATCAATGG+AGG | + | chr6.1:56835186-56835205 | None:intergenic | 40.0% | |
| AGAGAGAACTTAAAGTGTGC+AGG | + | chr6.1:56832717-56832736 | None:intergenic | 40.0% | |
| ATAGGAACTGACACTGTCTT+TGG | + | chr6.1:56835871-56835890 | None:intergenic | 40.0% | |
| ATTCTCCCAAGTACTCTTGA+TGG | - | chr6.1:56835347-56835366 | MS.gene76985:CDS | 40.0% | |
| CAATGCACGGTGTAATTGTA+CGG | - | chr6.1:56833698-56833717 | MS.gene76985:intron | 40.0% | |
| CCAACGCATAACTACATCAA+TGG | + | chr6.1:56835189-56835208 | None:intergenic | 40.0% | |
| CCATTGATGTAGTTATGCGT+TGG | - | chr6.1:56835186-56835205 | MS.gene76985:intron | 40.0% | |
| CCTTCCGAATTTCCTAAACT+GGG | + | chr6.1:56832787-56832806 | None:intergenic | 40.0% | |
| CTATTAGCTGCACTTCCATT+GGG | + | chr6.1:56834731-56834750 | None:intergenic | 40.0% | |
| GAAGTTCAAGAGCAGATTCA+TGG | - | chr6.1:56832406-56832425 | MS.gene76985:intron | 40.0% | |
| GAAGTTGCTTCTATGTGACT+AGG | - | chr6.1:56834415-56834434 | MS.gene76985:CDS | 40.0% | |
| GATGAAAACCGATACAATGC+TGG | - | chr6.1:56833842-56833861 | MS.gene76985:CDS | 40.0% | |
| GCAGATTTCTCACTTGGTAA+GGG | - | chr6.1:56834947-56834966 | MS.gene76985:CDS | 40.0% | |
| GCGATGATAAATATGGCCTA+TGG | + | chr6.1:56833784-56833803 | None:intergenic | 40.0% | |
| GCTTTACGAGTTCATGTGTA+AGG | - | chr6.1:56834438-56834457 | MS.gene76985:CDS | 40.0% | |
| GGTACAAATGATAGCAGAAC+AGG | - | chr6.1:56834643-56834662 | MS.gene76985:CDS | 40.0% | |
| GTAAAAGGTTGTCGAGTCAA+AGG | + | chr6.1:56835637-56835656 | None:intergenic | 40.0% | |
| TAAATATGGCCTATGGGAGT+TGG | + | chr6.1:56833777-56833796 | None:intergenic | 40.0% | |
| TACAGCTATCTGTTCCGAAA+TGG | - | chr6.1:56832014-56832033 | MS.gene76985:CDS | 40.0% | |
| TACCTCTACCAGCATTGTAT+CGG | + | chr6.1:56833853-56833872 | None:intergenic | 40.0% | |
| TACTTTGCCAGTCTTTCTTG+TGG | + | chr6.1:56834813-56834832 | None:intergenic | 40.0% | |
| TCAAAAGGCTAGAAGCTTGA+AGG | - | chr6.1:56832309-56832328 | MS.gene76985:intron | 40.0% | |
| TCAGATTTCCCAAGTCAAAG+AGG | - | chr6.1:56833503-56833522 | MS.gene76985:intron | 40.0% | |
| TCAGGACTTGAAGAAACTTC+AGG | - | chr6.1:56834622-56834641 | MS.gene76985:CDS | 40.0% | |
| TCCTTCCGAATTTCCTAAAC+TGG | + | chr6.1:56832788-56832807 | None:intergenic | 40.0% | |
| TCTATTAGCTGCACTTCCAT+TGG | + | chr6.1:56834732-56834751 | None:intergenic | 40.0% | |
| TGCAGAGAATGCAAAAGGTA+TGG | - | chr6.1:56832878-56832897 | MS.gene76985:CDS | 40.0% | |
| TGCATGAGAAAAGAAGATGC+AGG | + | chr6.1:56833442-56833461 | None:intergenic | 40.0% | |
| TTCAAGTCCTGAAACAAGTC+CGG | + | chr6.1:56834614-56834633 | None:intergenic | 40.0% | |
| TTGAAGAAGTGATCCACATG+TGG | + | chr6.1:56831735-56831754 | None:intergenic | 40.0% | |
| TTGTTTGATGTTGTTGGAGG+TGG | - | chr6.1:56835423-56835442 | MS.gene76985:CDS | 40.0% | |
| ! | AAGTCTTCAGACAAGGTGTT+TGG | + | chr6.1:56833107-56833126 | None:intergenic | 40.0% |
| ! | AGCACCGAGTTTGTATATGA+TGG | - | chr6.1:56834123-56834142 | MS.gene76985:intron | 40.0% |
| ! | GTGCTATTAAGTATCTGCCA+TGG | + | chr6.1:56834491-56834510 | None:intergenic | 40.0% |
| ! | TCCTTTGAGGAAATAAGGCT+TGG | - | chr6.1:56835949-56835968 | MS.gene76985:intron | 40.0% |
| ! | TGCATCTTCTTTTCTCATGC+AGG | - | chr6.1:56833441-56833460 | MS.gene76985:CDS | 40.0% |
| ! | TTTTTGCGTGTGTGTTGTGA+GGG | - | chr6.1:56832589-56832608 | MS.gene76985:intron | 40.0% |
| !! | AATAGAAGAGGTACCTTTGG+AGG | - | chr6.1:56834746-56834765 | MS.gene76985:CDS | 40.0% |
| !! | ACCAAGCCTTATTTCCTCAA+AGG | + | chr6.1:56835953-56835972 | None:intergenic | 40.0% |
| !! | ATTTGGTGCTGGAATTGTTC+GGG | - | chr6.1:56835600-56835619 | MS.gene76985:intron | 40.0% |
| !! | CAAGAGTACTTGGGAGAATT+CGG | + | chr6.1:56835346-56835365 | None:intergenic | 40.0% |
| !! | CATTTGGTGCTGGAATTGTT+CGG | - | chr6.1:56835599-56835618 | MS.gene76985:intron | 40.0% |
| !! | CTTTTATCCGGACTTGTTTC+AGG | - | chr6.1:56834604-56834623 | MS.gene76985:intron | 40.0% |
| !! | GCTAATAGAAGAGGTACCTT+TGG | - | chr6.1:56834743-56834762 | MS.gene76985:CDS | 40.0% |
| !! | TTAGTTCTACAAGAACTGCG+AGG | - | chr6.1:56832847-56832866 | MS.gene76985:intron | 40.0% |
| !!! | TTGTTTTGGATGTGGTAGAC+TGG | - | chr6.1:56835042-56835061 | MS.gene76985:CDS | 40.0% |
| !!! | TTTTAGAACCGATCCTCCAA+AGG | + | chr6.1:56834762-56834781 | None:intergenic | 40.0% |
| !!! | TTTTTTGCGTGTGTGTTGTG+AGG | - | chr6.1:56832588-56832607 | MS.gene76985:intron | 40.0% |
| AAAGAATGGCACTCATCCAG+TGG | + | chr6.1:56833397-56833416 | None:intergenic | 45.0% | |
| AAATGGATCCCAACTCCCAT+AGG | - | chr6.1:56833765-56833784 | MS.gene76985:intron | 45.0% | |
| AACCGATACAATGCTGGTAG+AGG | - | chr6.1:56833848-56833867 | MS.gene76985:CDS | 45.0% | |
| AAGTCACCTCCTAAATGAGC+CGG | + | chr6.1:56835910-56835929 | None:intergenic | 45.0% | |
| AGAGCTAGCAATGATTCTCC+TGG | - | chr6.1:56832333-56832352 | MS.gene76985:intron | 45.0% | |
| AGCGAAGTTCATCCCAGTTT+AGG | - | chr6.1:56832772-56832791 | MS.gene76985:intron | 45.0% | |
| AGCTGAGAAAGCTCGTATCT+TGG | - | chr6.1:56833892-56833911 | MS.gene76985:CDS | 45.0% | |
| AGTTCTCTCTGTTCGGTACT+TGG | - | chr6.1:56832727-56832746 | MS.gene76985:intron | 45.0% | |
| ATGGAGGCTGCTTATGTCAT+TGG | + | chr6.1:56835170-56835189 | None:intergenic | 45.0% | |
| CATCTCATTACGGCAAGAGA+AGG | - | chr6.1:56834274-56834293 | MS.gene76985:CDS | 45.0% | |
| CCCAGTTTAGGAAATTCGGA+AGG | - | chr6.1:56832784-56832803 | MS.gene76985:intron | 45.0% | |
| CGCAGATTTCTCACTTGGTA+AGG | - | chr6.1:56834946-56834965 | MS.gene76985:CDS | 45.0% | |
| CTCTATGTGGCAACATGGAA+CGG | - | chr6.1:56835386-56835405 | MS.gene76985:CDS | 45.0% | |
| GAAATCTACCAGCTGAGATG+TGG | + | chr6.1:56835458-56835477 | None:intergenic | 45.0% | |
| GATAGCTGTAAGTTCTGCCT+CGG | + | chr6.1:56832004-56832023 | None:intergenic | 45.0% | |
| GCAGAGTGATCGTATGAAGA+AGG | - | chr6.1:56832681-56832700 | MS.gene76985:intron | 45.0% | |
| GGAAGAGGATGATCGTTATG+AGG | + | chr6.1:56831701-56831720 | None:intergenic | 45.0% | |
| GGGATAGTAGTAGTAGTGAG+TGG | + | chr6.1:56835766-56835785 | None:intergenic | 45.0% | |
| TAAGGCTCTATGTGGCAACA+TGG | - | chr6.1:56835381-56835400 | MS.gene76985:CDS | 45.0% | |
| TAATTCGTACCCGCTGTCTA+CGG | + | chr6.1:56834310-56834329 | None:intergenic | 45.0% | |
| TAGGAAATTCGGAAGGATCC+AGG | - | chr6.1:56832791-56832810 | MS.gene76985:intron | 45.0% | |
| TATCCCGAAAACAGACACGT+TGG | - | chr6.1:56835780-56835799 | MS.gene76985:CDS | 45.0% | |
| TCAAGCTCCACAAGAAAGAC+TGG | - | chr6.1:56834803-56834822 | MS.gene76985:intron | 45.0% | |
| TGAGCAACCAATAGATGCTG+AGG | + | chr6.1:56834183-56834202 | None:intergenic | 45.0% | |
| TGAGTTCATGCAGCTAGAAG+AGG | - | chr6.1:56835541-56835560 | MS.gene76985:intron | 45.0% | |
| TGGTGTAGTAGTGGTAGTAG+TGG | + | chr6.1:56835851-56835870 | None:intergenic | 45.0% | |
| TTTGATGTTGTTGGAGGTGG+AGG | - | chr6.1:56835426-56835445 | MS.gene76985:CDS | 45.0% | |
| TTTGGATGTGGTAGACTGGT+AGG | - | chr6.1:56835046-56835065 | MS.gene76985:CDS | 45.0% | |
| ! | AGCTAAGGGTCTCCTTTTCA+AGG | + | chr6.1:56834387-56834406 | None:intergenic | 45.0% |
| ! | CACTGTCTTTGGTGTAGTAG+TGG | + | chr6.1:56835860-56835879 | None:intergenic | 45.0% |
| ! | CTTCTAGCTGCATGAACTCA+AGG | + | chr6.1:56835541-56835560 | None:intergenic | 45.0% |
| ! | GGAAGTGCAGCTAATAGAAG+AGG | - | chr6.1:56834734-56834753 | MS.gene76985:CDS | 45.0% |
| ! | TACACCGATTGAAGAGCAAC+AGG | - | chr6.1:56833028-56833047 | MS.gene76985:CDS | 45.0% |
| ! | TCCCAAGTACTCTTGATGGT+GGG | - | chr6.1:56835351-56835370 | MS.gene76985:CDS | 45.0% |
| ! | TCGACCAACGTGTCTGTTTT+CGG | + | chr6.1:56835787-56835806 | None:intergenic | 45.0% |
| ! | TGCAAAAGCGAAAGCATGAG+CGG | - | chr6.1:56832368-56832387 | MS.gene76985:intron | 45.0% |
| ! | TTCAGACAAGGTGTTTGGCT+CGG | + | chr6.1:56833102-56833121 | None:intergenic | 45.0% |
| ! | TTTTGCGTGTGTGTTGTGAG+GGG | - | chr6.1:56832590-56832609 | MS.gene76985:intron | 45.0% |
| !! | AACCCACCATCAAGAGTACT+TGG | + | chr6.1:56835356-56835375 | None:intergenic | 45.0% |
| !! | AAGAGGTACCTTTGGAGGAT+CGG | - | chr6.1:56834751-56834770 | MS.gene76985:CDS | 45.0% |
| !! | ACCCACCATCAAGAGTACTT+GGG | + | chr6.1:56835355-56835374 | None:intergenic | 45.0% |
| !! | ATTGCTCTAGGGCTCAAGTT+AGG | - | chr6.1:56831962-56831981 | MS.gene76985:CDS | 45.0% |
| !! | CAAGCTTCTAGCCTTTTGAC+CGG | + | chr6.1:56832308-56832327 | None:intergenic | 45.0% |
| !! | CAGAACAGGAAGTACTGTAC+GGG | - | chr6.1:56834657-56834676 | MS.gene76985:CDS | 45.0% |
| !! | GCAAGAAATTGCTGATTCCG+AGG | - | chr6.1:56831984-56832003 | MS.gene76985:CDS | 45.0% |
| !! | GCAGAACAGGAAGTACTGTA+CGG | - | chr6.1:56834656-56834675 | MS.gene76985:CDS | 45.0% |
| !! | TGGCTCGGTTACTTCATGTT+CGG | + | chr6.1:56833087-56833106 | None:intergenic | 45.0% |
| !!! | TAAGGGGGTTGTTTTGGATG+TGG | - | chr6.1:56835034-56835053 | MS.gene76985:CDS | 45.0% |
| AATGATTCTCCTGGAGCTGG+AGG | - | chr6.1:56832342-56832361 | MS.gene76985:intron | 50.0% | |
| AGCAATGATTCTCCTGGAGC+TGG | - | chr6.1:56832339-56832358 | MS.gene76985:intron | 50.0% | |
| ATGTCCAAGAGCGATACCAC+TGG | - | chr6.1:56833378-56833397 | MS.gene76985:intron | 50.0% | |
| ATGTGACGAAGAGTCTTGGC+TGG | - | chr6.1:56833578-56833597 | MS.gene76985:intron | 50.0% | |
| CAAGTGAGAAATCTGCGAGC+CGG | + | chr6.1:56834943-56834962 | None:intergenic | 50.0% | |
| CAGCATGTGACGAAGAGTCT+TGG | - | chr6.1:56833574-56833593 | MS.gene76985:intron | 50.0% | |
| CCACATGTGGTTTCAGCTTG+CGG | + | chr6.1:56831722-56831741 | None:intergenic | 50.0% | |
| CTCCCAAGTACTCTTGATGG+TGG | - | chr6.1:56835350-56835369 | MS.gene76985:CDS | 50.0% | |
| GCACGGTGTAATTGTACGGT+TGG | - | chr6.1:56833702-56833721 | MS.gene76985:intron | 50.0% | |
| GCGACCCGTACATAATAGAC+AGG | - | chr6.1:56832041-56832060 | MS.gene76985:CDS | 50.0% | |
| GTGGCAACATGGAACGGTTT+AGG | - | chr6.1:56835392-56835411 | MS.gene76985:CDS | 50.0% | |
| TATGAATACGGCCACGACTC+CGG | - | chr6.1:56835888-56835907 | MS.gene76985:intron | 50.0% | |
| TCATCCAGTGGTATCGCTCT+TGG | + | chr6.1:56833385-56833404 | None:intergenic | 50.0% | |
| TTGCACTCTGGGCCTTTGAA+GGG | + | chr6.1:56834691-56834710 | None:intergenic | 50.0% | |
| TTTGCATTTCCTCCAGCTCC+AGG | + | chr6.1:56832354-56832373 | None:intergenic | 50.0% | |
| TTTGCGTGTGTGTTGTGAGG+GGG | - | chr6.1:56832591-56832610 | MS.gene76985:intron | 50.0% | |
| ! | AGGCGCTTTTCTTGCACTCT+GGG | + | chr6.1:56834702-56834721 | None:intergenic | 50.0% |
| ! | CGACCAACGTGTCTGTTTTC+GGG | + | chr6.1:56835786-56835805 | None:intergenic | 50.0% |
| ! | GTAGTGGTAGTAGTGGAGAC+AGG | + | chr6.1:56835844-56835863 | None:intergenic | 50.0% |
| ! | TAGGCGCTTTTCTTGCACTC+TGG | + | chr6.1:56834703-56834722 | None:intergenic | 50.0% |
| !! | AGAGTGCAAGAAAAGCGCCT+AGG | - | chr6.1:56834702-56834721 | MS.gene76985:CDS | 50.0% |
| ACGACTCCGGCTCATTTAGG+AGG | - | chr6.1:56835901-56835920 | MS.gene76985:intron | 55.0% | |
| AGCAAGAACGCCGTAGACAG+CGG | - | chr6.1:56834297-56834316 | MS.gene76985:intron | 55.0% | |
| CCGCAAGCTGAAACCACATG+TGG | - | chr6.1:56831719-56831738 | MS.gene76985:intron | 55.0% | |
| CGGCTCGCAGATTTCTCACT+TGG | - | chr6.1:56834941-56834960 | MS.gene76985:CDS | 55.0% | |
| CGGGTCAAAGAGCCCTTCAA+AGG | - | chr6.1:56834676-56834695 | MS.gene76985:CDS | 55.0% | |
| CTTGCACTCTGGGCCTTTGA+AGG | + | chr6.1:56834692-56834711 | None:intergenic | 55.0% | |
| GCACTTCCATTGGGTGTCCT+AGG | + | chr6.1:56834722-56834741 | None:intergenic | 55.0% | |
| GGAGTCGTGGCCGTATTCAT+AGG | + | chr6.1:56835889-56835908 | None:intergenic | 55.0% | |
| GGTCAAAGCCACATCTCAGC+TGG | - | chr6.1:56835447-56835466 | MS.gene76985:intron | 55.0% | |
| GTGGTTTCAGCTTGCGGAAG+AGG | + | chr6.1:56831716-56831735 | None:intergenic | 55.0% | |
| TACGGGTCGCTCTCCCATTT+CGG | + | chr6.1:56832031-56832050 | None:intergenic | 55.0% | |
| TCCTAAATGAGCCGGAGTCG+TGG | + | chr6.1:56835902-56835921 | None:intergenic | 55.0% | |
| TGACGAAGAGTCTTGGCTGG+AGG | - | chr6.1:56833581-56833600 | MS.gene76985:intron | 55.0% | |
| ! | AAAGCGCCTAGGACACCCAA+TGG | - | chr6.1:56834713-56834732 | MS.gene76985:CDS | 55.0% |
| GCAAGAACGCCGTAGACAGC+GGG | - | chr6.1:56834298-56834317 | MS.gene76985:intron | 60.0% | |
| GCCACGACTCCGGCTCATTT+AGG | - | chr6.1:56835898-56835917 | MS.gene76985:intron | 60.0% | |
| TGAAGAGAGAGGGAGAGGCG+AGG | + | chr6.1:56832560-56832579 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 56831689 | 56836068 | 56831689 | ID=MS.gene76985 |
| chr6.1 | mRNA | 56831689 | 56836068 | 56831689 | ID=MS.gene76985.t1;Parent=MS.gene76985 |
| chr6.1 | exon | 56835994 | 56836068 | 56835994 | ID=MS.gene76985.t1.exon1;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56835994 | 56836068 | 56835994 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56835695 | 56835901 | 56835695 | ID=MS.gene76985.t1.exon2;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56835695 | 56835901 | 56835695 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56835208 | 56835453 | 56835208 | ID=MS.gene76985.t1.exon3;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56835208 | 56835453 | 56835208 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56834863 | 56835072 | 56834863 | ID=MS.gene76985.t1.exon4;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56834863 | 56835072 | 56834863 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56834621 | 56834776 | 56834621 | ID=MS.gene76985.t1.exon5;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56834621 | 56834776 | 56834621 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56834383 | 56834533 | 56834383 | ID=MS.gene76985.t1.exon6;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56834383 | 56834533 | 56834383 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56834143 | 56834294 | 56834143 | ID=MS.gene76985.t1.exon7;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56834143 | 56834294 | 56834143 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56833828 | 56833915 | 56833828 | ID=MS.gene76985.t1.exon8;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56833828 | 56833915 | 56833828 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56833611 | 56833684 | 56833611 | ID=MS.gene76985.t1.exon9;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56833611 | 56833684 | 56833611 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56833438 | 56833512 | 56833438 | ID=MS.gene76985.t1.exon10;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56833438 | 56833512 | 56833438 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56832870 | 56833131 | 56832870 | ID=MS.gene76985.t1.exon11;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56832870 | 56833131 | 56832870 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56831835 | 56832203 | 56831835 | ID=MS.gene76985.t1.exon12;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56831835 | 56832203 | 56831835 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| chr6.1 | exon | 56831689 | 56831717 | 56831689 | ID=MS.gene76985.t1.exon13;Parent=MS.gene76985.t1 |
| chr6.1 | CDS | 56831689 | 56831717 | 56831689 | ID=cds.MS.gene76985.t1;Parent=MS.gene76985.t1 |
| Gene Sequence |
| Protein sequence |
