Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78237.t1 | XP_003622996.1 | 98.9 | 444 | 5 | 0 | 1 | 444 | 1 | 444 | 1.20E-259 | 905.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78237.t1 | Q9LJ42 | 76.4 | 436 | 98 | 2 | 11 | 444 | 8 | 440 | 6.1e-196 | 684.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78237.t1 | G7L2D3 | 98.9 | 444 | 5 | 0 | 1 | 444 | 1 | 444 | 8.6e-260 | 905.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051914 | MS.gene78237 | 0.827471 | 1.54E-54 | -1.69E-46 |
MS.gene052169 | MS.gene78237 | 0.842601 | 2.34E-58 | -1.69E-46 |
MS.gene054662 | MS.gene78237 | 0.827929 | 1.19E-54 | -1.69E-46 |
MS.gene05652 | MS.gene78237 | 0.835469 | 1.65E-56 | -1.69E-46 |
MS.gene05732 | MS.gene78237 | 0.800158 | 1.64E-48 | -1.69E-46 |
MS.gene057669 | MS.gene78237 | 0.855341 | 6.73E-62 | -1.69E-46 |
MS.gene05926 | MS.gene78237 | 0.83273 | 8.00E-56 | -1.69E-46 |
MS.gene05960 | MS.gene78237 | 0.864373 | 1.27E-64 | -1.69E-46 |
MS.gene060291 | MS.gene78237 | 0.808326 | 3.27E-50 | -1.69E-46 |
MS.gene06093 | MS.gene78237 | 0.815349 | 9.68E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78237.t1 | MTR_7g059290 | 98.874 | 444 | 5 | 0 | 1 | 444 | 1 | 444 | 0.0 | 917 |
MS.gene78237.t1 | MTR_1g047370 | 76.233 | 446 | 99 | 5 | 6 | 444 | 5 | 450 | 0.0 | 686 |
MS.gene78237.t1 | MTR_4g104320 | 71.728 | 382 | 107 | 1 | 64 | 444 | 26 | 407 | 0.0 | 580 |
MS.gene78237.t1 | MTR_6g021950 | 65.803 | 386 | 132 | 0 | 59 | 444 | 19 | 404 | 0.0 | 563 |
MS.gene78237.t1 | MTR_3g075320 | 70.466 | 386 | 114 | 0 | 59 | 444 | 21 | 406 | 0.0 | 556 |
MS.gene78237.t1 | MTR_3g086310 | 69.171 | 386 | 116 | 2 | 59 | 444 | 21 | 403 | 0.0 | 531 |
MS.gene78237.t1 | MTR_1g111590 | 62.069 | 377 | 140 | 1 | 62 | 435 | 30 | 406 | 1.36e-177 | 503 |
MS.gene78237.t1 | MTR_3g086320 | 63.377 | 385 | 138 | 3 | 62 | 444 | 23 | 406 | 8.07e-177 | 501 |
MS.gene78237.t1 | MTR_1g062930 | 60.471 | 382 | 144 | 1 | 66 | 440 | 34 | 415 | 5.22e-175 | 498 |
MS.gene78237.t1 | MTR_7g102940 | 63.564 | 376 | 136 | 1 | 66 | 440 | 35 | 410 | 4.59e-174 | 496 |
MS.gene78237.t1 | MTR_4g107870 | 55.440 | 386 | 163 | 4 | 66 | 444 | 51 | 434 | 5.17e-157 | 451 |
MS.gene78237.t1 | MTR_5g038510 | 58.873 | 355 | 145 | 1 | 91 | 444 | 95 | 449 | 3.97e-148 | 429 |
MS.gene78237.t1 | MTR_8g468980 | 55.801 | 362 | 152 | 2 | 91 | 444 | 94 | 455 | 3.79e-145 | 422 |
MS.gene78237.t1 | MTR_2g023990 | 56.000 | 350 | 150 | 3 | 96 | 444 | 63 | 409 | 1.14e-142 | 414 |
MS.gene78237.t1 | MTR_5g038490 | 59.040 | 354 | 144 | 1 | 92 | 444 | 96 | 449 | 2.83e-142 | 414 |
MS.gene78237.t1 | MTR_4g132460 | 57.429 | 350 | 145 | 3 | 96 | 444 | 39 | 385 | 3.51e-142 | 412 |
MS.gene78237.t1 | MTR_6g011420 | 56.780 | 354 | 152 | 1 | 92 | 444 | 100 | 453 | 1.50e-141 | 412 |
MS.gene78237.t1 | MTR_7g009390 | 49.127 | 458 | 195 | 6 | 9 | 444 | 10 | 451 | 5.78e-140 | 409 |
MS.gene78237.t1 | MTR_3g075320 | 70.787 | 267 | 78 | 0 | 59 | 325 | 21 | 287 | 2.52e-139 | 400 |
MS.gene78237.t1 | MTR_8g078390 | 45.070 | 355 | 185 | 7 | 96 | 444 | 42 | 392 | 2.73e-100 | 305 |
MS.gene78237.t1 | MTR_8g078310 | 44.507 | 355 | 187 | 7 | 96 | 444 | 42 | 392 | 3.46e-100 | 305 |
MS.gene78237.t1 | MTR_3g030900 | 44.507 | 355 | 187 | 7 | 96 | 444 | 23 | 373 | 1.60e-99 | 302 |
MS.gene78237.t1 | MTR_8g078280 | 43.662 | 355 | 190 | 7 | 96 | 444 | 42 | 392 | 2.17e-96 | 295 |
MS.gene78237.t1 | MTR_8g078350 | 45.352 | 355 | 184 | 7 | 96 | 444 | 42 | 392 | 5.40e-94 | 289 |
MS.gene78237.t1 | MTR_4g064420 | 43.553 | 349 | 174 | 7 | 96 | 440 | 42 | 371 | 7.00e-92 | 284 |
MS.gene78237.t1 | MTR_5g019160 | 45.070 | 355 | 185 | 7 | 96 | 444 | 41 | 391 | 1.70e-89 | 277 |
MS.gene78237.t1 | MTR_5g019060 | 43.662 | 355 | 190 | 7 | 96 | 444 | 41 | 391 | 1.16e-87 | 273 |
MS.gene78237.t1 | MTR_5g035840 | 42.697 | 356 | 192 | 8 | 96 | 444 | 41 | 391 | 1.25e-86 | 270 |
MS.gene78237.t1 | MTR_5g019090 | 44.225 | 355 | 188 | 7 | 96 | 444 | 41 | 391 | 3.51e-86 | 269 |
MS.gene78237.t1 | MTR_5g019170 | 45.376 | 346 | 179 | 7 | 96 | 435 | 41 | 382 | 3.84e-86 | 270 |
MS.gene78237.t1 | MTR_3g070740 | 61.538 | 208 | 67 | 3 | 238 | 444 | 131 | 326 | 1.69e-85 | 265 |
MS.gene78237.t1 | MTR_1g069950 | 44.981 | 269 | 144 | 3 | 171 | 437 | 1 | 267 | 8.89e-75 | 235 |
MS.gene78237.t1 | MTR_2g023980 | 48.638 | 257 | 98 | 7 | 171 | 425 | 1 | 225 | 8.40e-69 | 222 |
MS.gene78237.t1 | MTR_6g077900 | 44.727 | 275 | 129 | 6 | 129 | 401 | 6 | 259 | 6.37e-62 | 202 |
MS.gene78237.t1 | MTR_1g115550 | 36.806 | 288 | 156 | 7 | 113 | 399 | 13 | 275 | 2.10e-39 | 144 |
MS.gene78237.t1 | MTR_1g067450 | 35.540 | 287 | 161 | 4 | 113 | 399 | 62 | 324 | 5.75e-37 | 139 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78237.t1 | AT4G13710 | 75.231 | 432 | 97 | 4 | 23 | 444 | 39 | 470 | 0.0 | 682 |
MS.gene78237.t1 | AT4G13710 | 76.485 | 421 | 89 | 4 | 31 | 444 | 34 | 451 | 0.0 | 677 |
MS.gene78237.t1 | AT3G24670 | 76.376 | 436 | 98 | 2 | 11 | 444 | 8 | 440 | 0.0 | 667 |
MS.gene78237.t1 | AT3G07010 | 81.378 | 392 | 73 | 0 | 53 | 444 | 25 | 416 | 0.0 | 665 |
MS.gene78237.t1 | AT1G04680 | 80.977 | 389 | 70 | 1 | 60 | 444 | 41 | 429 | 0.0 | 660 |
MS.gene78237.t1 | AT4G13210 | 74.885 | 434 | 100 | 3 | 12 | 444 | 13 | 438 | 0.0 | 642 |
MS.gene78237.t1 | AT5G48900 | 81.538 | 390 | 72 | 0 | 55 | 444 | 28 | 417 | 0.0 | 636 |
MS.gene78237.t1 | AT3G07010 | 82.880 | 368 | 63 | 0 | 77 | 444 | 16 | 383 | 0.0 | 635 |
MS.gene78237.t1 | AT4G13210 | 79.695 | 394 | 79 | 1 | 52 | 444 | 8 | 401 | 0.0 | 631 |
MS.gene78237.t1 | AT3G24230 | 65.996 | 447 | 139 | 5 | 6 | 444 | 10 | 451 | 0.0 | 596 |
MS.gene78237.t1 | AT1G67750 | 71.916 | 381 | 105 | 1 | 64 | 444 | 30 | 408 | 0.0 | 572 |
MS.gene78237.t1 | AT5G63180 | 70.235 | 383 | 112 | 1 | 64 | 444 | 50 | 432 | 0.0 | 570 |
MS.gene78237.t1 | AT4G24780 | 71.728 | 382 | 107 | 1 | 64 | 444 | 27 | 408 | 0.0 | 560 |
MS.gene78237.t1 | AT4G24780 | 71.728 | 382 | 107 | 1 | 64 | 444 | 27 | 408 | 0.0 | 560 |
MS.gene78237.t1 | AT3G27400 | 66.404 | 381 | 127 | 1 | 64 | 444 | 37 | 416 | 0.0 | 531 |
MS.gene78237.t1 | AT3G27400 | 66.404 | 381 | 127 | 1 | 64 | 444 | 33 | 412 | 0.0 | 530 |
MS.gene78237.t1 | AT3G53190 | 62.963 | 378 | 133 | 1 | 66 | 436 | 37 | 414 | 2.14e-172 | 492 |
MS.gene78237.t1 | AT5G04310 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 2.36e-170 | 487 |
MS.gene78237.t1 | AT5G04310 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 7.20e-169 | 484 |
MS.gene78237.t1 | AT5G04310 | 57.561 | 410 | 158 | 2 | 42 | 435 | 25 | 434 | 7.20e-169 | 484 |
MS.gene78237.t1 | AT3G54920 | 57.360 | 394 | 144 | 4 | 62 | 440 | 32 | 416 | 3.35e-163 | 469 |
MS.gene78237.t1 | AT5G55720 | 55.875 | 383 | 157 | 5 | 63 | 444 | 21 | 392 | 2.34e-154 | 443 |
MS.gene78237.t1 | AT1G11920 | 59.714 | 350 | 138 | 3 | 96 | 444 | 37 | 384 | 5.05e-154 | 442 |
MS.gene78237.t1 | AT3G01270 | 53.301 | 409 | 181 | 3 | 46 | 444 | 67 | 475 | 3.60e-152 | 441 |
MS.gene78237.t1 | AT1G14420 | 55.556 | 360 | 154 | 1 | 91 | 444 | 100 | 459 | 4.26e-149 | 432 |
MS.gene78237.t1 | AT5G15110 | 57.465 | 355 | 149 | 2 | 92 | 444 | 118 | 472 | 1.39e-148 | 431 |
MS.gene78237.t1 | AT4G22090 | 56.857 | 350 | 147 | 3 | 96 | 444 | 47 | 393 | 4.50e-147 | 424 |
MS.gene78237.t1 | AT4G22080 | 56.857 | 350 | 147 | 3 | 96 | 444 | 47 | 393 | 1.05e-146 | 424 |
MS.gene78237.t1 | AT2G02720 | 46.288 | 458 | 213 | 6 | 9 | 444 | 9 | 455 | 6.50e-142 | 414 |
MS.gene78237.t1 | AT1G30350 | 53.009 | 349 | 148 | 3 | 96 | 444 | 36 | 368 | 8.14e-129 | 377 |
MS.gene78237.t1 | AT5G09280 | 48.387 | 248 | 125 | 3 | 129 | 375 | 6 | 251 | 3.12e-78 | 245 |
MS.gene78237.t1 | AT3G09540 | 38.408 | 289 | 150 | 7 | 113 | 399 | 61 | 323 | 2.52e-42 | 154 |
MS.gene78237.t1 | AT3G55140 | 37.884 | 293 | 146 | 9 | 113 | 399 | 14 | 276 | 5.54e-42 | 152 |
MS.gene78237.t1 | AT3G09540 | 38.062 | 289 | 147 | 8 | 113 | 399 | 61 | 319 | 8.65e-40 | 147 |
MS.gene78237.t1 | AT3G55140 | 36.719 | 256 | 131 | 7 | 150 | 399 | 22 | 252 | 5.32e-35 | 132 |
MS.gene78237.t1 | AT3G09540 | 36.992 | 246 | 129 | 5 | 113 | 357 | 61 | 281 | 7.91e-35 | 131 |
Find 141 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCATTGCATACAACCATTT+TGG | 0.110425 | 7.4:-44296161 | MS.gene78237:CDS |
CGTAGCTCCCCTTCCCATTT+TGG | 0.137331 | 7.4:-44296562 | MS.gene78237:CDS |
TCTTTGGTTCCAGTCATATT+TGG | 0.228663 | 7.4:-44296504 | MS.gene78237:CDS |
TCATGATCAATTCTTGCTTC+AGG | 0.237394 | 7.4:+44296725 | None:intergenic |
ATGATACAGGTTATGTTATT+AGG | 0.237677 | 7.4:-44296224 | MS.gene78237:intron |
TGGTCTTGTTGATGCTATTA+TGG | 0.249104 | 7.4:-44296449 | MS.gene78237:CDS |
CCATTGTCCTCCATCCAAAA+TGG | 0.255429 | 7.4:+44296548 | None:intergenic |
GGTGATGGCATTTCCATCTT+TGG | 0.269913 | 7.4:-44296520 | MS.gene78237:CDS |
TATGCTAGAGCCTCAAGTTT+AGG | 0.285322 | 7.4:-44295472 | MS.gene78237:CDS |
TGGATACAGGGTCCGGAGTA+TGG | 0.302482 | 7.4:-44295579 | MS.gene78237:CDS |
TTCACGGGGTCGTCGTCTCT+TGG | 0.302742 | 7.4:+44296829 | None:intergenic |
GCTGATTGTGCCATTGGTTT+TGG | 0.316248 | 7.4:-44296901 | MS.gene78237:CDS |
CTAGTTACCTTGGCATCCTT+TGG | 0.320663 | 7.4:+44296126 | None:intergenic |
TGACGGAGAGTGCCAGGTCT+TGG | 0.329790 | 7.4:+44296805 | None:intergenic |
TCGGCTTACAATCATGGATA+TGG | 0.339277 | 7.4:+44296602 | None:intergenic |
ATGCTAGAGCCTCAAGTTTA+GGG | 0.340135 | 7.4:-44295471 | MS.gene78237:CDS |
GGATAAGACCCTCCCCAAAA+TGG | 0.344066 | 7.4:+44296147 | None:intergenic |
ACCAACTAAAGAAGATGATT+TGG | 0.350395 | 7.4:+44295447 | None:intergenic |
GCCAATGTTCATATTGCCTT+TGG | 0.350632 | 7.4:-44296673 | MS.gene78237:CDS |
TTGTAAGAATGTTACCTCTT+TGG | 0.351461 | 7.4:+44295700 | None:intergenic |
ATTGGCACCACGACCATCTA+TGG | 0.380940 | 7.4:+44296690 | None:intergenic |
GCCAAATCATCTTCTTTAGT+TGG | 0.384213 | 7.4:-44295448 | MS.gene78237:CDS |
CATGATCAATTCTTGCTTCA+GGG | 0.386947 | 7.4:+44296726 | None:intergenic |
AATGTTACCTCTTTGGCAAA+AGG | 0.387769 | 7.4:+44295707 | None:intergenic |
GACGGAGAGTGCCAGGTCTT+GGG | 0.402712 | 7.4:+44296806 | None:intergenic |
GGTCTTGTTGATGCTATTAT+GGG | 0.421679 | 7.4:-44296448 | MS.gene78237:CDS |
TCACGGGGTCGTCGTCTCTT+GGG | 0.425792 | 7.4:+44296830 | None:intergenic |
TTGCCTTGGCTGTTAATTGT+GGG | 0.427394 | 7.4:+44295752 | None:intergenic |
TCCCAGTCGGCTTACAATCA+TGG | 0.429765 | 7.4:+44296596 | None:intergenic |
GAGTATGGAAGGGTTGGAAT+TGG | 0.435726 | 7.4:-44295564 | MS.gene78237:CDS |
AGTGCCAGGTCTTGGGTTCA+CGG | 0.439411 | 7.4:+44296813 | None:intergenic |
AACAGTTTCAAGACCATAGA+TGG | 0.441561 | 7.4:-44296703 | MS.gene78237:CDS |
CACTGGGTGATGTATGCTAT+TGG | 0.442502 | 7.4:-44295788 | MS.gene78237:CDS |
GTTGCCTTGGCTGTTAATTG+TGG | 0.451055 | 7.4:+44295751 | None:intergenic |
CTCAATTTACCTCGTTGTGG+TGG | 0.451940 | 7.4:+44296389 | None:intergenic |
GTGCCAGGTCTTGGGTTCAC+GGG | 0.453527 | 7.4:+44296814 | None:intergenic |
GTGACAAAGAGGGTGGATAC+AGG | 0.460057 | 7.4:-44295592 | MS.gene78237:CDS |
ATGTTACCTCTTTGGCAAAA+GGG | 0.462229 | 7.4:+44295708 | None:intergenic |
ACGGCGTGACGGAGAGTGCC+AGG | 0.476026 | 7.4:+44296799 | None:intergenic |
AATATGACTGGAACCAAAGA+TGG | 0.477110 | 7.4:+44296507 | None:intergenic |
TTAGTTGGTACTTTAACTGC+AGG | 0.478938 | 7.4:-44295433 | MS.gene78237:CDS |
GTGGTGGGTGAAGTAGTTAT+TGG | 0.479572 | 7.4:+44296405 | None:intergenic |
GCTGGCGCTGTGACAAGCTT+TGG | 0.480343 | 7.4:-44296945 | MS.gene78237:CDS |
GCTGCAGCTCCTCTTCCTGA+TGG | 0.482198 | 7.4:+44295499 | None:intergenic |
CTGGTGTTATTAAATGTCGC+CGG | 0.482263 | 7.4:-44295408 | MS.gene78237:CDS |
ACCATGGAAGCAATCTCCTC+TGG | 0.483733 | 7.4:+44299879 | None:intergenic |
CGGTTGGCTGATTGTGCCAT+TGG | 0.488142 | 7.4:-44296907 | MS.gene78237:CDS |
TATGGAAGGGTTGGAATTGG+AGG | 0.491858 | 7.4:-44295561 | MS.gene78237:CDS |
ATCCATGATTGTAAGCCGAC+TGG | 0.492456 | 7.4:-44296598 | MS.gene78237:CDS |
CAGCGCCAGCAGTCATCCAT+TGG | 0.493207 | 7.4:+44296958 | None:intergenic |
AAGAAGCGTTATAGCGAGAA+TGG | 0.493349 | 7.4:+44300535 | None:intergenic |
CATTGTCCTCCATCCAAAAT+GGG | 0.494585 | 7.4:+44296549 | None:intergenic |
TCTCTGTCTAATTGCGCTGA+TGG | 0.499109 | 7.4:-44296469 | MS.gene78237:CDS |
TGGTGTTATTAAATGTCGCC+GGG | 0.500739 | 7.4:-44295407 | MS.gene78237:CDS |
GTAGTTATTGGAAACGGTAA+TGG | 0.501809 | 7.4:+44296417 | None:intergenic |
TCCAGAGGAGATTGCTTCCA+TGG | 0.502756 | 7.4:-44299880 | MS.gene78237:CDS |
TACAGGGTCCGGAGTATGGA+AGG | 0.503644 | 7.4:-44295575 | MS.gene78237:CDS |
GTGAAGCAACAATGGAGTTA+CGG | 0.503946 | 7.4:-44300580 | None:intergenic |
TTCATTAGAATCAATAGCAT+TGG | 0.506032 | 7.4:+44300502 | None:intergenic |
CCCAAAATGGTTGTATGCAA+TGG | 0.513203 | 7.4:+44296160 | None:intergenic |
GGGCAAGGTATCTGTTGCCT+TGG | 0.513269 | 7.4:+44295738 | None:intergenic |
GAAATCCAATGGATGACTGC+TGG | 0.513725 | 7.4:-44296963 | MS.gene78237:CDS |
GGTACTTTAACTGCAGGTGC+TGG | 0.514799 | 7.4:-44295427 | MS.gene78237:CDS |
GTGATCAATCCAAATATGAC+TGG | 0.515085 | 7.4:+44296495 | None:intergenic |
ATTGGAAACGGTAATGGCGG+TGG | 0.517945 | 7.4:+44296423 | None:intergenic |
GTCACGCCGTCATTCAAGAT+AGG | 0.520035 | 7.4:-44296786 | MS.gene78237:CDS |
CATGATGATAGTGTTGTGAA+TGG | 0.528531 | 7.4:-44300326 | MS.gene78237:intron |
CTTTGGCAAAAGGGTTCTGA+GGG | 0.532600 | 7.4:+44295717 | None:intergenic |
GGTTGGAATTGGAGGTCCGA+GGG | 0.539450 | 7.4:-44295553 | MS.gene78237:CDS |
GTACCGCCGCAGAAAGCGGT+TGG | 0.543660 | 7.4:-44296923 | MS.gene78237:CDS |
AATAGTAATGCATGCTCCAA+AGG | 0.544329 | 7.4:+44296657 | None:intergenic |
TCTTTGGCAAAAGGGTTCTG+AGG | 0.544752 | 7.4:+44295716 | None:intergenic |
TCCATGATTGTAAGCCGACT+GGG | 0.546175 | 7.4:-44296597 | MS.gene78237:CDS |
GAGCTTGAATAATTCATCAA+TGG | 0.547562 | 7.4:-44300282 | MS.gene78237:CDS |
AAGAGGGTGGATACAGGGTC+CGG | 0.551709 | 7.4:-44295586 | MS.gene78237:CDS |
AATGCTATCGGTGGCCGTGA+CGG | 0.552465 | 7.4:-44296874 | MS.gene78237:CDS |
TCAATTTACCTCGTTGTGGT+GGG | 0.552926 | 7.4:+44296390 | None:intergenic |
TTGGGGAGGGTCTTATCCAA+AGG | 0.555778 | 7.4:-44296142 | MS.gene78237:CDS |
TCCTCCATCCAAAATGGGAA+GGG | 0.556374 | 7.4:+44296554 | None:intergenic |
GGTCCGGAGTATGGAAGGGT+TGG | 0.562652 | 7.4:-44295570 | MS.gene78237:CDS |
ATCACCAATGTCATCATCCA+TGG | 0.564338 | 7.4:-44296628 | MS.gene78237:CDS |
GTCTTATCCAAAGGATGCCA+AGG | 0.567344 | 7.4:-44296133 | MS.gene78237:intron |
GGTGAAGTAGTTATTGGAAA+CGG | 0.568326 | 7.4:+44296411 | None:intergenic |
GACCCCGTGAACCCAAGACC+TGG | 0.571184 | 7.4:-44296817 | MS.gene78237:CDS |
GTCCTCCATCCAAAATGGGA+AGG | 0.575724 | 7.4:+44296553 | None:intergenic |
CAGCCAACCGCTTTCTGCGG+CGG | 0.578877 | 7.4:+44296920 | None:intergenic |
TGTATTAACACATGCCACCC+CGG | 0.580417 | 7.4:+44295389 | None:intergenic |
TACGCAATCACACGGAGAGA+AGG | 0.580498 | 7.4:-44297014 | MS.gene78237:CDS |
TGCCAGGTCTTGGGTTCACG+GGG | 0.582221 | 7.4:+44296815 | None:intergenic |
TGACAAAGAGGGTGGATACA+GGG | 0.585715 | 7.4:-44295591 | MS.gene78237:CDS |
ATTTAGCAAAAGGTCTCCCT+CGG | 0.591755 | 7.4:+44295537 | None:intergenic |
CTATCGGTGGCCGTGACGGA+AGG | 0.592368 | 7.4:-44296870 | MS.gene78237:CDS |
CCTCCATCCAAAATGGGAAG+GGG | 0.592528 | 7.4:+44296555 | None:intergenic |
CAATGGCCTATCTTGAATGA+CGG | 0.593970 | 7.4:+44296780 | None:intergenic |
AATCAGCCAACCGCTTTCTG+CGG | 0.594304 | 7.4:+44296917 | None:intergenic |
TAAACAATGACTATACACAC+TGG | 0.595352 | 7.4:-44295805 | MS.gene78237:CDS |
ATAATTCATCAATGGCGGAA+AGG | 0.597934 | 7.4:-44300274 | MS.gene78237:intron |
AGTCTCAATTTACCTCGTTG+TGG | 0.602217 | 7.4:+44296386 | None:intergenic |
ATGTGGGACTGGAAATCCAA+TGG | 0.603052 | 7.4:-44296974 | MS.gene78237:CDS |
CAAAAGGGTTCTGAGGGGCA+AGG | 0.604683 | 7.4:+44295723 | None:intergenic |
AATCATGGATATGGACACCA+TGG | 0.604716 | 7.4:+44296611 | None:intergenic |
TCCAAAGGCAATATGAACAT+TGG | 0.605546 | 7.4:+44296672 | None:intergenic |
TGATTTGGCCCCTAAACTTG+AGG | 0.605907 | 7.4:+44295462 | None:intergenic |
ATTCCAACCCTTCCATACTC+CGG | 0.611120 | 7.4:+44295567 | None:intergenic |
CTTGAATAATTCATCAATGG+CGG | 0.613119 | 7.4:-44300279 | MS.gene78237:CDS |
TTCAAGACCATAGATGGTCG+TGG | 0.615460 | 7.4:-44296697 | MS.gene78237:CDS |
GTTATTAAATGTCGCCGGGG+TGG | 0.616534 | 7.4:-44295403 | MS.gene78237:CDS |
TATCTTGAATGACGGCGTGA+CGG | 0.616846 | 7.4:+44296788 | None:intergenic |
AGGACAATGGCTGATGGTGA+TGG | 0.620179 | 7.4:-44296535 | MS.gene78237:CDS |
TTTGGTCGCAATGCTATCGG+TGG | 0.622293 | 7.4:-44296883 | MS.gene78237:CDS |
TCATTCAAGATAGGCCATTG+TGG | 0.624115 | 7.4:-44296777 | MS.gene78237:CDS |
CTATTGATTCTAATGAATCA+CGG | 0.625598 | 7.4:-44300496 | MS.gene78237:intron |
TAAGCCGACTGGGAATGCTA+TGG | 0.626089 | 7.4:-44296587 | MS.gene78237:CDS |
TTTGGTACCGCCGCAGAAAG+CGG | 0.627376 | 7.4:-44296927 | MS.gene78237:CDS |
TGGGTGATGTATGCTATTGG+AGG | 0.631164 | 7.4:-44295785 | MS.gene78237:CDS |
CAGGACTATACGCAATCACA+CGG | 0.632843 | 7.4:-44297022 | MS.gene78237:CDS |
GGATGGAGGACAATGGCTGA+TGG | 0.643191 | 7.4:-44296541 | MS.gene78237:CDS |
AAACAATGACTATACACACT+GGG | 0.644998 | 7.4:-44295804 | MS.gene78237:CDS |
GGGTTGGAATTGGAGGTCCG+AGG | 0.647861 | 7.4:-44295554 | MS.gene78237:CDS |
TGCTAGAGCCTCAAGTTTAG+GGG | 0.654577 | 7.4:-44295470 | MS.gene78237:CDS |
CAACGTAGTACCTTCCGTCA+CGG | 0.656117 | 7.4:+44296860 | None:intergenic |
ACAGGGTCCGGAGTATGGAA+GGG | 0.658271 | 7.4:-44295574 | MS.gene78237:CDS |
GAATTATTACGTATCAACCA+TGG | 0.659930 | 7.4:+44299863 | None:intergenic |
CTCTTGAACACAATCCACAA+TGG | 0.663084 | 7.4:+44296763 | None:intergenic |
TGGACAGGTGACAAAGAGGG+TGG | 0.664985 | 7.4:-44295599 | MS.gene78237:intron |
GAACCCACAATTAACAGCCA+AGG | 0.665968 | 7.4:-44295755 | MS.gene78237:CDS |
GAATATTGCAGATGTAGACA+CGG | 0.668694 | 7.4:-44295842 | MS.gene78237:intron |
AGCATTGCGACCAAAACCAA+TGG | 0.669104 | 7.4:+44296891 | None:intergenic |
GTTATTGGAAACGGTAATGG+CGG | 0.672422 | 7.4:+44296420 | None:intergenic |
GACACCATGGATGATGACAT+TGG | 0.680615 | 7.4:+44296624 | None:intergenic |
AATATTGCAGATGTAGACAC+GGG | 0.684120 | 7.4:-44295841 | MS.gene78237:intron |
ATGTGGACAGGTGACAAAGA+GGG | 0.696684 | 7.4:-44295602 | MS.gene78237:intron |
CGAACCATAGCATTCCCAGT+CGG | 0.703490 | 7.4:+44296583 | None:intergenic |
GCATGCAGTTGATAATCCAG+AGG | 0.706876 | 7.4:-44299895 | MS.gene78237:CDS |
GATGTGGACAGGTGACAAAG+AGG | 0.712511 | 7.4:-44295603 | MS.gene78237:intron |
TATAGTCATTGTTTACCACG+TGG | 0.716427 | 7.4:+44295813 | None:intergenic |
TTTGGCAAAAGGGTTCTGAG+GGG | 0.747633 | 7.4:+44295718 | None:intergenic |
GGTGTTATTAAATGTCGCCG+GGG | 0.749848 | 7.4:-44295406 | MS.gene78237:CDS |
GATTGTGTTCAAGAGAGACA+TGG | 0.751862 | 7.4:-44296755 | MS.gene78237:CDS |
CTACTTCACCCACCACAACG+AGG | 0.767107 | 7.4:-44296398 | MS.gene78237:intron |
TAGACACGGGTATTTCCACG+TGG | 0.797672 | 7.4:-44295828 | MS.gene78237:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAATAAATAATTAAATTAA+AGG | + | chr7.4:44296135-44296154 | None:intergenic | 0.0% |
!! | ATAAATAATTAAATTAAAGG+AGG | + | chr7.4:44296132-44296151 | None:intergenic | 10.0% |
!! | CATATTAAAAAAATTAGAAA+AGG | + | chr7.4:44297818-44297837 | None:intergenic | 10.0% |
!! | TTATAATTAATGACATTTAT+AGG | - | chr7.4:44297022-44297041 | MS.gene78237:CDS | 10.0% |
!!! | TATTTTGTAATGATTAAAAT+CGG | - | chr7.4:44295773-44295792 | MS.gene78237:CDS | 10.0% |
!! | AATAAATAATAATATCACCA+TGG | - | chr7.4:44297060-44297079 | MS.gene78237:intron | 15.0% |
!! | AATATATCTAGAAAATGTTA+TGG | + | chr7.4:44298400-44298419 | None:intergenic | 15.0% |
!! | ACAAATAAAAAAAATTGAGT+TGG | - | chr7.4:44296300-44296319 | MS.gene78237:intron | 15.0% |
!! | ATCTAAATCTATCAATAAAA+AGG | + | chr7.4:44297620-44297639 | None:intergenic | 15.0% |
!! | TAGAAAAAATTGAAATATGA+TGG | - | chr7.4:44298580-44298599 | MS.gene78237:intron | 15.0% |
!! | TATTAATTATATAAAACCAG+AGG | + | chr7.4:44297282-44297301 | None:intergenic | 15.0% |
!!! | AACATTTTCTAGATATATTT+TGG | - | chr7.4:44298401-44298420 | MS.gene78237:intron | 15.0% |
!!! | ATACTTGTTAAATTTTAAAC+AGG | - | chr7.4:44298921-44298940 | MS.gene78237:intron | 15.0% |
!!! | TAACTTCTAAAATTTTTAGT+AGG | - | chr7.4:44298165-44298184 | MS.gene78237:intron | 15.0% |
!!! | TTAAGATGCTTATTTTTATT+CGG | - | chr7.4:44296207-44296226 | MS.gene78237:CDS | 15.0% |
!!! | TTAGTACTAGTATTTATTTT+GGG | - | chr7.4:44299910-44299929 | MS.gene78237:CDS | 15.0% |
!!! | TTATTTTTTTTCCTTTTTGA+AGG | - | chr7.4:44299876-44299895 | MS.gene78237:CDS | 15.0% |
!!! | TTTAGTACTAGTATTTATTT+TGG | - | chr7.4:44299909-44299928 | MS.gene78237:CDS | 15.0% |
!!! | TTTTTTCATCAAAATTAATC+AGG | + | chr7.4:44296795-44296814 | None:intergenic | 15.0% |
!! | AAAATTGTCCCTAAAATTAT+TGG | - | chr7.4:44298824-44298843 | MS.gene78237:intron | 20.0% |
!! | AAATATTGGAAAATTTGATG+TGG | - | chr7.4:44300343-44300362 | MS.gene78237:intron | 20.0% |
!! | AATATAAAGGTCATCAAATA+GGG | + | chr7.4:44297180-44297199 | None:intergenic | 20.0% |
!! | ACTCAATCTAAACTTAATTA+TGG | - | chr7.4:44297851-44297870 | MS.gene78237:intron | 20.0% |
!! | ATAAATACTAGTACTAAAAC+TGG | + | chr7.4:44299907-44299926 | None:intergenic | 20.0% |
!! | ATAAATCTAAAAACATCATG+AGG | + | chr7.4:44297931-44297950 | None:intergenic | 20.0% |
!! | ATTATTATTGATGTATGTTG+AGG | + | chr7.4:44298697-44298716 | None:intergenic | 20.0% |
!! | CCATAAAAAAAATTTGGAAA+TGG | + | chr7.4:44296712-44296731 | None:intergenic | 20.0% |
!! | CTTTCACCATAAAAAAAATT+TGG | + | chr7.4:44296718-44296737 | None:intergenic | 20.0% |
!! | GATTCACAACAAATTATAAA+TGG | + | chr7.4:44296663-44296682 | None:intergenic | 20.0% |
!! | TAAAAAGGTAGTATTAGAAA+AGG | + | chr7.4:44299652-44299671 | None:intergenic | 20.0% |
!! | TAATATATCATTCCAAAAAG+AGG | + | chr7.4:44296685-44296704 | None:intergenic | 20.0% |
!! | TATCTATAAACCTATTTCAT+CGG | - | chr7.4:44296169-44296188 | MS.gene78237:CDS | 20.0% |
!! | TGATGAACTTTACTAAATAT+TGG | - | chr7.4:44300329-44300348 | MS.gene78237:intron | 20.0% |
!! | TTAGATGTATGTACTTAATA+TGG | - | chr7.4:44296589-44296608 | MS.gene78237:CDS | 20.0% |
!! | TTATTATTGATGTATGTTGA+GGG | + | chr7.4:44298696-44298715 | None:intergenic | 20.0% |
!!! | AAAAGCATCAAAGAATATAA+AGG | + | chr7.4:44297193-44297212 | None:intergenic | 20.0% |
!!! | AATTCGTACCAATAATTTTA+GGG | + | chr7.4:44298835-44298854 | None:intergenic | 20.0% |
!!! | AATTTTTTTTATGGTGAAAG+TGG | - | chr7.4:44296718-44296737 | MS.gene78237:CDS | 20.0% |
!!! | ATTGAGTTGGATTATTTTTT+TGG | - | chr7.4:44296313-44296332 | MS.gene78237:intron | 20.0% |
!!! | ATTTTGATGAAAAAATGAGT+TGG | - | chr7.4:44296800-44296819 | MS.gene78237:CDS | 20.0% |
!!! | CCATTTCCAAATTTTTTTTA+TGG | - | chr7.4:44296709-44296728 | MS.gene78237:CDS | 20.0% |
!!! | GTAAACAAGTTTTAAATAGT+AGG | - | chr7.4:44296530-44296549 | MS.gene78237:CDS | 20.0% |
!!! | TAATTCGTACCAATAATTTT+AGG | + | chr7.4:44298836-44298855 | None:intergenic | 20.0% |
!!! | TTTAAAATGACTCTAGTAAA+AGG | + | chr7.4:44297238-44297257 | None:intergenic | 20.0% |
! | AAAGATGTTTGTACTTGTAA+AGG | + | chr7.4:44297525-44297544 | None:intergenic | 25.0% |
! | AAATTGGGTAAAAATGACAA+CGG | - | chr7.4:44299983-44300002 | MS.gene78237:intron | 25.0% |
! | AAATTGTATGAGTAATTGCA+TGG | - | chr7.4:44297109-44297128 | MS.gene78237:intron | 25.0% |
! | AAGTTTAGATTGAGTAGAAA+GGG | + | chr7.4:44297846-44297865 | None:intergenic | 25.0% |
! | AATTGAGTTCTTAATGATAC+AGG | - | chr7.4:44299725-44299744 | MS.gene78237:intron | 25.0% |
! | AATTGTATGAGTAATTGCAT+GGG | - | chr7.4:44297110-44297129 | MS.gene78237:intron | 25.0% |
! | ACAATTTCTAACTTTCTTGA+CGG | + | chr7.4:44297096-44297115 | None:intergenic | 25.0% |
! | AGAATAATTTAATTCTCCTC+TGG | - | chr7.4:44297263-44297282 | MS.gene78237:intron | 25.0% |
! | AGGTATAAAAAGACAAACAA+GGG | + | chr7.4:44297963-44297982 | None:intergenic | 25.0% |
! | AGTCTAATCAGAAATTTATG+TGG | + | chr7.4:44297987-44298006 | None:intergenic | 25.0% |
! | ATAATATCACCATGGAAAAA+CGG | - | chr7.4:44297068-44297087 | MS.gene78237:intron | 25.0% |
! | ATCTAAACTTAATTATGGCT+AGG | - | chr7.4:44297856-44297875 | MS.gene78237:intron | 25.0% |
! | ATGAGAAGTCTACTAAAATT+GGG | - | chr7.4:44299968-44299987 | MS.gene78237:intron | 25.0% |
! | ATGATACAGGTTATGTTATT+AGG | - | chr7.4:44299738-44299757 | MS.gene78237:intron | 25.0% |
! | ATTATTAACTTCCTGAATCT+TGG | + | chr7.4:44298485-44298504 | None:intergenic | 25.0% |
! | GAAATTTATTATGACCGAAA+TGG | + | chr7.4:44297465-44297484 | None:intergenic | 25.0% |
! | GAATATAAAGGTCATCAAAT+AGG | + | chr7.4:44297181-44297200 | None:intergenic | 25.0% |
! | GTCTAATCAGAAATTTATGT+GGG | + | chr7.4:44297986-44298005 | None:intergenic | 25.0% |
! | TAAGTTTAGATTGAGTAGAA+AGG | + | chr7.4:44297847-44297866 | None:intergenic | 25.0% |
! | TCGTTTAGTGATGATTTAAA+CGG | - | chr7.4:44295980-44295999 | MS.gene78237:intron | 25.0% |
! | TCTAAACTTAATTATGGCTA+GGG | - | chr7.4:44297857-44297876 | MS.gene78237:intron | 25.0% |
! | TGGTCATTTAATAAGTTCAT+GGG | + | chr7.4:44298465-44298484 | None:intergenic | 25.0% |
! | TTACTTAAGATAATGAAGGA+GGG | + | chr7.4:44299604-44299623 | None:intergenic | 25.0% |
! | TTATTAAATGACCAAGATTC+AGG | - | chr7.4:44298471-44298490 | MS.gene78237:intron | 25.0% |
! | TTCATTAGAATCAATAGCAT+TGG | + | chr7.4:44295463-44295482 | None:intergenic | 25.0% |
! | TTGGTCATTTAATAAGTTCA+TGG | + | chr7.4:44298466-44298485 | None:intergenic | 25.0% |
! | TTGTAGTAAAACAGAATCAA+CGG | + | chr7.4:44295933-44295952 | None:intergenic | 25.0% |
!! | AATTATTGGGTCTTTGTTTA+TGG | - | chr7.4:44297785-44297804 | MS.gene78237:intron | 25.0% |
!! | GAAGAGTGATTTACTAATTT+TGG | + | chr7.4:44298075-44298094 | None:intergenic | 25.0% |
!! | GTTGTTACTTAAGATAATGA+AGG | + | chr7.4:44299608-44299627 | None:intergenic | 25.0% |
!! | TATCAAGGATGCATAAATTT+TGG | + | chr7.4:44296959-44296978 | None:intergenic | 25.0% |
!! | TGTGTATTACTGATTACTTT+GGG | - | chr7.4:44298201-44298220 | MS.gene78237:intron | 25.0% |
!! | TTGTGTATTACTGATTACTT+TGG | - | chr7.4:44298200-44298219 | MS.gene78237:intron | 25.0% |
!! | TTTTTATTCGGATTTGAATC+TGG | - | chr7.4:44296219-44296238 | MS.gene78237:intron | 25.0% |
!!! | CTATTGATTCTAATGAATCA+CGG | - | chr7.4:44295466-44295485 | MS.gene78237:CDS | 25.0% |
!!! | TTTTCTAGATATATTTTGGC+TGG | - | chr7.4:44298405-44298424 | MS.gene78237:intron | 25.0% |
AAAAAGCTCCATTTAGCAAA+AGG | + | chr7.4:44300438-44300457 | None:intergenic | 30.0% | |
AAACAATGACTATACACACT+GGG | - | chr7.4:44300158-44300177 | MS.gene78237:intron | 30.0% | |
AAATACAAACTAAAGCCAAG+TGG | + | chr7.4:44296507-44296526 | None:intergenic | 30.0% | |
AAATTACCCGTTTGTCTTAA+AGG | + | chr7.4:44298778-44298797 | None:intergenic | 30.0% | |
AATACAAACTAAAGCCAAGT+GGG | + | chr7.4:44296506-44296525 | None:intergenic | 30.0% | |
ACCAACTAAAGAAGATGATT+TGG | + | chr7.4:44300518-44300537 | None:intergenic | 30.0% | |
ACCACTATACAAGAAATGAA+AGG | + | chr7.4:44297675-44297694 | None:intergenic | 30.0% | |
ACTACAATAAATGCCAAGTT+AGG | + | chr7.4:44298561-44298580 | None:intergenic | 30.0% | |
AGAACTAGACAGAGAATTTA+TGG | + | chr7.4:44300077-44300096 | None:intergenic | 30.0% | |
AGCTGGCAAATAAAATATTC+TGG | + | chr7.4:44297413-44297432 | None:intergenic | 30.0% | |
ATAGAATGATACGGTGTATA+CGG | + | chr7.4:44298627-44298646 | None:intergenic | 30.0% | |
ATTTATGCATCCTTGATACA+AGG | - | chr7.4:44296961-44296980 | MS.gene78237:CDS | 30.0% | |
CATAAATCTTACACGTTACA+GGG | - | chr7.4:44298029-44298048 | MS.gene78237:intron | 30.0% | |
CATGAGAAGTCTACTAAAAT+TGG | - | chr7.4:44299967-44299986 | MS.gene78237:intron | 30.0% | |
CATTTAATTGATCATGTGCA+TGG | - | chr7.4:44296376-44296395 | MS.gene78237:intron | 30.0% | |
CCACTATACAAGAAATGAAA+GGG | + | chr7.4:44297674-44297693 | None:intergenic | 30.0% | |
CTAAACTTAATTATGGCTAG+GGG | - | chr7.4:44297858-44297877 | MS.gene78237:intron | 30.0% | |
CTACAATAAATGCCAAGTTA+GGG | + | chr7.4:44298560-44298579 | None:intergenic | 30.0% | |
CTTGAATAATTCATCAATGG+CGG | - | chr7.4:44295683-44295702 | MS.gene78237:intron | 30.0% | |
GAATTATTACGTATCAACCA+TGG | + | chr7.4:44296102-44296121 | None:intergenic | 30.0% | |
GAGCTTGAATAATTCATCAA+TGG | - | chr7.4:44295680-44295699 | MS.gene78237:intron | 30.0% | |
GAGGTATAAAAAGACAAACA+AGG | + | chr7.4:44297964-44297983 | None:intergenic | 30.0% | |
GGTCATTTAATAAGTTCATG+GGG | + | chr7.4:44298464-44298483 | None:intergenic | 30.0% | |
GTCATTTAATAAGTTCATGG+GGG | + | chr7.4:44298463-44298482 | None:intergenic | 30.0% | |
GTTACTTAAGATAATGAAGG+AGG | + | chr7.4:44299605-44299624 | None:intergenic | 30.0% | |
TAAACAATGACTATACACAC+TGG | - | chr7.4:44300157-44300176 | MS.gene78237:intron | 30.0% | |
TAATCAGAAATTTATGTGGG+AGG | + | chr7.4:44297983-44298002 | None:intergenic | 30.0% | |
TACAATAAATGCCAAGTTAG+GGG | + | chr7.4:44298559-44298578 | None:intergenic | 30.0% | |
TGCAGATAATTCTAATCCAA+CGG | + | chr7.4:44295829-44295848 | None:intergenic | 30.0% | |
TTGTAAGAATGTTACCTCTT+TGG | + | chr7.4:44300265-44300284 | None:intergenic | 30.0% | |
TTTATTATGACCGAAATGGT+CGG | + | chr7.4:44297461-44297480 | None:intergenic | 30.0% | |
! | AGTCATGAAGATTGGATTTT+AGG | + | chr7.4:44297559-44297578 | None:intergenic | 30.0% |
! | GTAAAGGCAATTTTCAGATA+AGG | + | chr7.4:44297509-44297528 | None:intergenic | 30.0% |
! | GTATTTTCTTCCTCTGTTTT+TGG | - | chr7.4:44296413-44296432 | MS.gene78237:CDS | 30.0% |
! | TGCATTTTCAGCTTAAGTAA+TGG | - | chr7.4:44296032-44296051 | MS.gene78237:intron | 30.0% |
! | TTTTAAATACTACTGCAGTC+TGG | + | chr7.4:44297155-44297174 | None:intergenic | 30.0% |
!! | ATTCAGTCCTTTAAGACAAA+CGG | - | chr7.4:44298768-44298787 | MS.gene78237:intron | 30.0% |
!! | TTTGTTGTGAATCCTCTTTT+TGG | - | chr7.4:44296670-44296689 | MS.gene78237:CDS | 30.0% |
AACAGTTTCAAGACCATAGA+TGG | - | chr7.4:44299259-44299278 | MS.gene78237:intron | 35.0% | |
AATAGTAATGCATGCTCCAA+AGG | + | chr7.4:44299308-44299327 | None:intergenic | 35.0% | |
AATATGACTGGAACCAAAGA+TGG | + | chr7.4:44299458-44299477 | None:intergenic | 35.0% | |
AATATTGCAGATGTAGACAC+GGG | - | chr7.4:44300121-44300140 | MS.gene78237:intron | 35.0% | |
AATGTTACCTCTTTGGCAAA+AGG | + | chr7.4:44300258-44300277 | None:intergenic | 35.0% | |
AATGTTACTGCTAGTTACCT+TGG | + | chr7.4:44299849-44299868 | None:intergenic | 35.0% | |
ACTTAATATGGTCCCATTAG+CGG | - | chr7.4:44296601-44296620 | MS.gene78237:CDS | 35.0% | |
ACTTCTCATGTCAAATAGAG+AGG | + | chr7.4:44299957-44299976 | None:intergenic | 35.0% | |
AGGATACGGATAGAATGATA+CGG | + | chr7.4:44298636-44298655 | None:intergenic | 35.0% | |
ATCACTCTTCAGTAGTCAAA+AGG | - | chr7.4:44298085-44298104 | MS.gene78237:intron | 35.0% | |
ATGTTACCTCTTTGGCAAAA+GGG | + | chr7.4:44300257-44300276 | None:intergenic | 35.0% | |
CATATCTGATCCTTGTATCA+AGG | + | chr7.4:44296974-44296993 | None:intergenic | 35.0% | |
CATGATCAATTCTTGCTTCA+GGG | + | chr7.4:44299239-44299258 | None:intergenic | 35.0% | |
CCATAAATCTTACACGTTAC+AGG | - | chr7.4:44298028-44298047 | MS.gene78237:intron | 35.0% | |
CCCTTTCATTTCTTGTATAG+TGG | - | chr7.4:44297671-44297690 | MS.gene78237:intron | 35.0% | |
CCTGTAACGTGTAAGATTTA+TGG | + | chr7.4:44298031-44298050 | None:intergenic | 35.0% | |
GAATATTGCAGATGTAGACA+CGG | - | chr7.4:44300120-44300139 | MS.gene78237:intron | 35.0% | |
GCAAACAGTACTATTTACGT+CGG | - | chr7.4:44295882-44295901 | MS.gene78237:intron | 35.0% | |
GCATGAATTCCTAATAGTCT+GGG | + | chr7.4:44298272-44298291 | None:intergenic | 35.0% | |
GCCAAATCATCTTCTTTAGT+TGG | - | chr7.4:44300514-44300533 | MS.gene78237:CDS | 35.0% | |
GGTGAAGTAGTTATTGGAAA+CGG | + | chr7.4:44299554-44299573 | None:intergenic | 35.0% | |
GTAGTTATTGGAAACGGTAA+TGG | + | chr7.4:44299548-44299567 | None:intergenic | 35.0% | |
GTGATCAATCCAAATATGAC+TGG | + | chr7.4:44299470-44299489 | None:intergenic | 35.0% | |
GTGATTGAAGTCATGAAGAT+TGG | + | chr7.4:44297567-44297586 | None:intergenic | 35.0% | |
GTTCATAAACCCAGACTATT+AGG | - | chr7.4:44298260-44298279 | MS.gene78237:intron | 35.0% | |
TACTGCAGTCTGGTAATAAA+TGG | + | chr7.4:44297145-44297164 | None:intergenic | 35.0% | |
TACTTTCTCCTATGTTTCTC+TGG | - | chr7.4:44297736-44297755 | MS.gene78237:intron | 35.0% | |
TATAGTCATTGTTTACCACG+TGG | + | chr7.4:44300152-44300171 | None:intergenic | 35.0% | |
TCACTCTTCAGTAGTCAAAA+GGG | - | chr7.4:44298086-44298105 | MS.gene78237:intron | 35.0% | |
TCATGATCAATTCTTGCTTC+AGG | + | chr7.4:44299240-44299259 | None:intergenic | 35.0% | |
TCCAAAGGCAATATGAACAT+TGG | + | chr7.4:44299293-44299312 | None:intergenic | 35.0% | |
TGCATGAATTCCTAATAGTC+TGG | + | chr7.4:44298273-44298292 | None:intergenic | 35.0% | |
TGGGTCAACAATTAAGGATA+CGG | + | chr7.4:44298650-44298669 | None:intergenic | 35.0% | |
TTCGTAAACCAGAGAAACAT+AGG | + | chr7.4:44297747-44297766 | None:intergenic | 35.0% | |
TTCTCAAAAGCCAAAAACAG+AGG | + | chr7.4:44296426-44296445 | None:intergenic | 35.0% | |
TTGGAAAATTTGATGTGGAC+AGG | - | chr7.4:44300348-44300367 | MS.gene78237:intron | 35.0% | |
! | AACACTCTTTAGAAGAACAG+AGG | + | chr7.4:44300040-44300059 | None:intergenic | 35.0% |
! | ACCATTGCATACAACCATTT+TGG | - | chr7.4:44299801-44299820 | MS.gene78237:intron | 35.0% |
! | ATAAAGGTGTAGATAACCGT+TGG | - | chr7.4:44295810-44295829 | MS.gene78237:CDS | 35.0% |
! | ATAATTCATCAATGGCGGAA+AGG | - | chr7.4:44295688-44295707 | MS.gene78237:intron | 35.0% |
! | CATGATGATAGTGTTGTGAA+TGG | - | chr7.4:44295636-44295655 | MS.gene78237:intron | 35.0% |
! | CATTGCATACAACCATTTTG+GGG | - | chr7.4:44299803-44299822 | MS.gene78237:intron | 35.0% |
! | CCATTGCATACAACCATTTT+GGG | - | chr7.4:44299802-44299821 | MS.gene78237:intron | 35.0% |
! | GATTGATTCATTAAGCACCA+TGG | + | chr7.4:44297351-44297370 | None:intergenic | 35.0% |
! | GGGTTTATGAACTCTGTTTT+TGG | + | chr7.4:44298252-44298271 | None:intergenic | 35.0% |
! | TCTTTGGTTCCAGTCATATT+TGG | - | chr7.4:44299458-44299477 | MS.gene78237:intron | 35.0% |
! | TTAGTTGGTACTTTAACTGC+AGG | - | chr7.4:44300529-44300548 | MS.gene78237:CDS | 35.0% |
!! | GGTCTTGTTGATGCTATTAT+GGG | - | chr7.4:44299514-44299533 | MS.gene78237:intron | 35.0% |
!! | TCTAGTTCTTGCACTAACAA+TGG | - | chr7.4:44300088-44300107 | MS.gene78237:intron | 35.0% |
!! | TGGTCTTGTTGATGCTATTA+TGG | - | chr7.4:44299513-44299532 | MS.gene78237:intron | 35.0% |
!! | TTCAGTCCTTTAAGACAAAC+GGG | - | chr7.4:44298769-44298788 | MS.gene78237:intron | 35.0% |
!!! | ACTCTGTTTTTGGTTCTTTC+AGG | + | chr7.4:44298242-44298261 | None:intergenic | 35.0% |
!!! | AGTCTGAGTTTTTTCTCATG+TGG | - | chr7.4:44298971-44298990 | MS.gene78237:intron | 35.0% |
!!! | GTCTGAGTTTTTTCTCATGT+GGG | - | chr7.4:44298972-44298991 | MS.gene78237:intron | 35.0% |
!!! | TGTTTTTGGCTTTTGAGAAG+AGG | - | chr7.4:44296427-44296446 | MS.gene78237:CDS | 35.0% |
AAACTAGATCTCCCCTAACT+TGG | - | chr7.4:44298545-44298564 | MS.gene78237:intron | 40.0% | |
AATCATGGATATGGACACCA+TGG | + | chr7.4:44299354-44299373 | None:intergenic | 40.0% | |
ACAAAGGTAGCACATTCATG+TGG | + | chr7.4:44298333-44298352 | None:intergenic | 40.0% | |
ACAGGCTGTAGAAACTACAA+AGG | + | chr7.4:44298349-44298368 | None:intergenic | 40.0% | |
ACATTAGCATGTGGTTAAGC+TGG | + | chr7.4:44297430-44297449 | None:intergenic | 40.0% | |
ACTATTTACGTCGGTCAGAT+CGG | - | chr7.4:44295891-44295910 | MS.gene78237:intron | 40.0% | |
AGTCTCAATTTACCTCGTTG+TGG | + | chr7.4:44299579-44299598 | None:intergenic | 40.0% | |
ATCACCAATGTCATCATCCA+TGG | - | chr7.4:44299334-44299353 | MS.gene78237:intron | 40.0% | |
ATCGCCATGTTCTTTGCATA+TGG | - | chr7.4:44297368-44297387 | MS.gene78237:intron | 40.0% | |
ATGCTAGAGCCTCAAGTTTA+GGG | - | chr7.4:44300491-44300510 | MS.gene78237:intron | 40.0% | |
ATTTAGCAAAAGGTCTCCCT+CGG | + | chr7.4:44300428-44300447 | None:intergenic | 40.0% | |
CAATGGCCTATCTTGAATGA+CGG | + | chr7.4:44299185-44299204 | None:intergenic | 40.0% | |
CATTGTCCTCCATCCAAAAT+GGG | + | chr7.4:44299416-44299435 | None:intergenic | 40.0% | |
CCAAGACATGTGTTTAAGAG+GGG | + | chr7.4:44297698-44297717 | None:intergenic | 40.0% | |
CCCAAAATGGTTGTATGCAA+TGG | + | chr7.4:44299805-44299824 | None:intergenic | 40.0% | |
CTCTTAAACACATGTCTTGG+CGG | - | chr7.4:44297698-44297717 | MS.gene78237:intron | 40.0% | |
CTCTTGAACACAATCCACAA+TGG | + | chr7.4:44299202-44299221 | None:intergenic | 40.0% | |
GATCCCATATGCAAAGAACA+TGG | + | chr7.4:44297375-44297394 | None:intergenic | 40.0% | |
GATCTCAGAACATTAGCATG+TGG | + | chr7.4:44297439-44297458 | None:intergenic | 40.0% | |
GATTCATTAAGCACCATGGA+AGG | + | chr7.4:44297347-44297366 | None:intergenic | 40.0% | |
GATTGTGTTCAAGAGAGACA+TGG | - | chr7.4:44299207-44299226 | MS.gene78237:intron | 40.0% | |
GCAGTCTGGTAATAAATGGT+GGG | + | chr7.4:44297141-44297160 | None:intergenic | 40.0% | |
GCCAAGACATGTGTTTAAGA+GGG | + | chr7.4:44297699-44297718 | None:intergenic | 40.0% | |
GCCAATGTTCATATTGCCTT+TGG | - | chr7.4:44299289-44299308 | MS.gene78237:intron | 40.0% | |
GGGACACATTTCAGTATTCA+GGG | - | chr7.4:44297878-44297897 | MS.gene78237:intron | 40.0% | |
GTATGAGTAATTGCATGGGT+AGG | - | chr7.4:44297114-44297133 | MS.gene78237:intron | 40.0% | |
GTCATGTGGGTCAACAATTA+AGG | + | chr7.4:44298656-44298675 | None:intergenic | 40.0% | |
TATGCTAGAGCCTCAAGTTT+AGG | - | chr7.4:44300490-44300509 | MS.gene78237:intron | 40.0% | |
TCAATTTACCTCGTTGTGGT+GGG | + | chr7.4:44299575-44299594 | None:intergenic | 40.0% | |
TCATTCAAGATAGGCCATTG+TGG | - | chr7.4:44299185-44299204 | MS.gene78237:intron | 40.0% | |
TCGACATTGTCCGATGAAAT+AGG | + | chr7.4:44296182-44296201 | None:intergenic | 40.0% | |
TCGCCATGTTCTTTGCATAT+GGG | - | chr7.4:44297369-44297388 | MS.gene78237:intron | 40.0% | |
TCGGCTTACAATCATGGATA+TGG | + | chr7.4:44299363-44299382 | None:intergenic | 40.0% | |
TGCAGTCTGGTAATAAATGG+TGG | + | chr7.4:44297142-44297161 | None:intergenic | 40.0% | |
TTGCCTTGGCTGTTAATTGT+GGG | + | chr7.4:44300213-44300232 | None:intergenic | 40.0% | |
! | GTTATTGGAAACGGTAATGG+CGG | + | chr7.4:44299545-44299564 | None:intergenic | 40.0% |
! | TTTTTCACTCCATCAGGAAG+AGG | - | chr7.4:44300454-44300473 | MS.gene78237:intron | 40.0% |
!! | AAGAAGCGTTATAGCGAGAA+TGG | + | chr7.4:44295430-44295449 | None:intergenic | 40.0% |
!! | AGTTAGGGGAGATCTAGTTT+TGG | + | chr7.4:44298545-44298564 | None:intergenic | 40.0% |
!! | CTGGTGTTATTAAATGTCGC+CGG | - | chr7.4:44300554-44300573 | MS.gene78237:CDS | 40.0% |
!! | TGGTGTTATTAAATGTCGCC+GGG | - | chr7.4:44300555-44300574 | MS.gene78237:CDS | 40.0% |
!!! | AGTTTTTTCTCATGTGGGAC+TGG | - | chr7.4:44298977-44298996 | MS.gene78237:intron | 40.0% |
!!! | GTTAGGGGAGATCTAGTTTT+GGG | + | chr7.4:44298544-44298563 | None:intergenic | 40.0% |
!!! | TTAGGGGAGATCTAGTTTTG+GGG | + | chr7.4:44298543-44298562 | None:intergenic | 40.0% |
AACTGGACGCTCCTTCAAAA+AGG | + | chr7.4:44299890-44299909 | None:intergenic | 45.0% | |
ACCACAATGCAACCGCTAAT+GGG | + | chr7.4:44296616-44296635 | None:intergenic | 45.0% | |
ACGGTGTATACGGAATAACG+AGG | + | chr7.4:44298617-44298636 | None:intergenic | 45.0% | |
AGCATTGCGACCAAAACCAA+TGG | + | chr7.4:44299074-44299093 | None:intergenic | 45.0% | |
ATCCATGATTGTAAGCCGAC+TGG | - | chr7.4:44299364-44299383 | MS.gene78237:intron | 45.0% | |
ATGTGGACAGGTGACAAAGA+GGG | - | chr7.4:44300360-44300379 | MS.gene78237:intron | 45.0% | |
ATGTGGGACTGGAAATCCAA+TGG | - | chr7.4:44298988-44299007 | MS.gene78237:intron | 45.0% | |
ATTCCAACCCTTCCATACTC+CGG | + | chr7.4:44300398-44300417 | None:intergenic | 45.0% | |
CAAATAGAGAGGCTCAGCTT+AGG | + | chr7.4:44299946-44299965 | None:intergenic | 45.0% | |
CAACTTCCTAGTGTCTCAGA+GGG | - | chr7.4:44300013-44300032 | MS.gene78237:intron | 45.0% | |
CACTGGGTGATGTATGCTAT+TGG | - | chr7.4:44300174-44300193 | MS.gene78237:intron | 45.0% | |
CAGGACTATACGCAATCACA+CGG | - | chr7.4:44298940-44298959 | MS.gene78237:intron | 45.0% | |
CCATTGTCCTCCATCCAAAA+TGG | + | chr7.4:44299417-44299436 | None:intergenic | 45.0% | |
CCCCTCTTAAACACATGTCT+TGG | - | chr7.4:44297695-44297714 | MS.gene78237:intron | 45.0% | |
CGCCAAGACATGTGTTTAAG+AGG | + | chr7.4:44297700-44297719 | None:intergenic | 45.0% | |
CGGTGTATACGGAATAACGA+GGG | + | chr7.4:44298616-44298635 | None:intergenic | 45.0% | |
CTACAAGCACAATGCATCTC+TGG | - | chr7.4:44298369-44298388 | MS.gene78237:intron | 45.0% | |
CTAGTTACCTTGGCATCCTT+TGG | + | chr7.4:44299839-44299858 | None:intergenic | 45.0% | |
CTCAATTTACCTCGTTGTGG+TGG | + | chr7.4:44299576-44299595 | None:intergenic | 45.0% | |
CTGCATGAGATAGCTCAGAA+TGG | - | chr7.4:44295844-44295863 | MS.gene78237:intron | 45.0% | |
GAAATCCAATGGATGACTGC+TGG | - | chr7.4:44298999-44299018 | MS.gene78237:intron | 45.0% | |
GAACCCACAATTAACAGCCA+AGG | - | chr7.4:44300207-44300226 | MS.gene78237:intron | 45.0% | |
GACACCATGGATGATGACAT+TGG | + | chr7.4:44299341-44299360 | None:intergenic | 45.0% | |
GAGACACTAGGAAGTTGGAA+TGG | + | chr7.4:44300010-44300029 | None:intergenic | 45.0% | |
GAGTATGGAAGGGTTGGAAT+TGG | - | chr7.4:44300398-44300417 | MS.gene78237:intron | 45.0% | |
GATGCATTGTGCTTGTAGAC+AGG | + | chr7.4:44298367-44298386 | None:intergenic | 45.0% | |
GGGGACACATTTCAGTATTC+AGG | - | chr7.4:44297877-44297896 | MS.gene78237:intron | 45.0% | |
GTATACGGAATAACGAGGGT+TGG | + | chr7.4:44298612-44298631 | None:intergenic | 45.0% | |
GTCTTATCCAAAGGATGCCA+AGG | - | chr7.4:44299829-44299848 | MS.gene78237:intron | 45.0% | |
GTTGCCTTGGCTGTTAATTG+TGG | + | chr7.4:44300214-44300233 | None:intergenic | 45.0% | |
TATCTTGAATGACGGCGTGA+CGG | + | chr7.4:44299177-44299196 | None:intergenic | 45.0% | |
TATGGAAGGGTTGGAATTGG+AGG | - | chr7.4:44300401-44300420 | MS.gene78237:intron | 45.0% | |
TCAGGCAAACACAAGAACAG+TGG | + | chr7.4:44296777-44296796 | None:intergenic | 45.0% | |
TCCATGATTGTAAGCCGACT+GGG | - | chr7.4:44299365-44299384 | MS.gene78237:intron | 45.0% | |
TCCTCCATCCAAAATGGGAA+GGG | + | chr7.4:44299411-44299430 | None:intergenic | 45.0% | |
TCTCTGTCTAATTGCGCTGA+TGG | - | chr7.4:44299493-44299512 | MS.gene78237:intron | 45.0% | |
TCTTCAGTAGTCAAAAGGGC+AGG | - | chr7.4:44298090-44298109 | MS.gene78237:intron | 45.0% | |
TCTTTGGCAAAAGGGTTCTG+AGG | + | chr7.4:44300249-44300268 | None:intergenic | 45.0% | |
TGACAAAGAGGGTGGATACA+GGG | - | chr7.4:44300371-44300390 | MS.gene78237:intron | 45.0% | |
TGCTAGAGCCTCAAGTTTAG+GGG | - | chr7.4:44300492-44300511 | MS.gene78237:intron | 45.0% | |
TGGGTGATGTATGCTATTGG+AGG | - | chr7.4:44300177-44300196 | MS.gene78237:intron | 45.0% | |
TGTATGTTGAGGGATGAGAC+TGG | + | chr7.4:44298686-44298705 | None:intergenic | 45.0% | |
TTAAAATCGGAGCGTACACG+TGG | - | chr7.4:44295786-44295805 | MS.gene78237:CDS | 45.0% | |
TTCAAGACCATAGATGGTCG+TGG | - | chr7.4:44299265-44299284 | MS.gene78237:intron | 45.0% | |
! | CCATTTTGGATGGAGGACAA+TGG | - | chr7.4:44299414-44299433 | MS.gene78237:intron | 45.0% |
! | CTTTGGCAAAAGGGTTCTGA+GGG | + | chr7.4:44300248-44300267 | None:intergenic | 45.0% |
! | GAGGGAGACCTTTTGCTAAA+TGG | - | chr7.4:44300427-44300446 | MS.gene78237:intron | 45.0% |
! | GGTGATGGCATTTCCATCTT+TGG | - | chr7.4:44299442-44299461 | MS.gene78237:intron | 45.0% |
! | TCAGAACCCTTTTGCCAAAG+AGG | - | chr7.4:44300248-44300267 | MS.gene78237:intron | 45.0% |
! | TGATTTGGCCCCTAAACTTG+AGG | + | chr7.4:44300503-44300522 | None:intergenic | 45.0% |
!! | CGTTCTGAAGTTTCCTTCCA+TGG | - | chr7.4:44297331-44297350 | MS.gene78237:intron | 45.0% |
!! | GCATACAACCATTTTGGGGA+GGG | - | chr7.4:44299807-44299826 | MS.gene78237:intron | 45.0% |
!! | GCATGCAGTTGATAATCCAG+AGG | - | chr7.4:44296067-44296086 | MS.gene78237:intron | 45.0% |
!! | GGTGTTATTAAATGTCGCCG+GGG | - | chr7.4:44300556-44300575 | MS.gene78237:CDS | 45.0% |
!! | GGTTTTGGTCGCAATGCTAT+CGG | - | chr7.4:44299076-44299095 | MS.gene78237:intron | 45.0% |
!! | GTGGTGGGTGAAGTAGTTAT+TGG | + | chr7.4:44299560-44299579 | None:intergenic | 45.0% |
!! | GTTCTGAGATCCGACCATTT+CGG | - | chr7.4:44297448-44297467 | MS.gene78237:intron | 45.0% |
!! | TGCATACAACCATTTTGGGG+AGG | - | chr7.4:44299806-44299825 | MS.gene78237:intron | 45.0% |
!! | TTTGGCAAAAGGGTTCTGAG+GGG | + | chr7.4:44300247-44300266 | None:intergenic | 45.0% |
!!! | GAGATCTAGTTTTGGGGTGT+CGG | + | chr7.4:44298537-44298556 | None:intergenic | 45.0% |
!!! | GCTGATTGTGCCATTGGTTT+TGG | - | chr7.4:44299061-44299080 | MS.gene78237:intron | 45.0% |
!!! | GGAGCTTTTTTCACTCCATC+AGG | - | chr7.4:44300448-44300467 | MS.gene78237:intron | 45.0% |
!! | ATACAATAAATTATAATTAT+TGG | - | chr7.4:44297771-44297790 | MS.gene78237:intron | 5.0% |
!! | TACAATAAATTATAATTATT+GGG | - | chr7.4:44297772-44297791 | MS.gene78237:intron | 5.0% |
!! | TGATATAAAATTAATTAAAA+AGG | + | chr7.4:44299667-44299686 | None:intergenic | 5.0% |
!!! | TAATTATAATTTTAATGAAA+TGG | + | chr7.4:44297011-44297030 | None:intergenic | 5.0% |
!!! | TATTATTATTTATTTTGAAA+AGG | + | chr7.4:44297054-44297073 | None:intergenic | 5.0% |
AATCAGCCAACCGCTTTCTG+CGG | + | chr7.4:44299048-44299067 | None:intergenic | 50.0% | |
ACCATGGAAGCAATCTCCTC+TGG | + | chr7.4:44296086-44296105 | None:intergenic | 50.0% | |
ATGTTGAGGGATGAGACTGG+TGG | + | chr7.4:44298683-44298702 | None:intergenic | 50.0% | |
ATTGGCACCACGACCATCTA+TGG | + | chr7.4:44299275-44299294 | None:intergenic | 50.0% | |
CAACGTAGTACCTTCCGTCA+CGG | + | chr7.4:44299105-44299124 | None:intergenic | 50.0% | |
CACATGTCTTGGCGGAGATT+TGG | - | chr7.4:44297706-44297725 | MS.gene78237:intron | 50.0% | |
CCAACTTCCTAGTGTCTCAG+AGG | - | chr7.4:44300012-44300031 | MS.gene78237:intron | 50.0% | |
CCTACATCACCCAACAAGGT+GGG | - | chr7.4:44298302-44298321 | MS.gene78237:intron | 50.0% | |
CCTCCATCCAAAATGGGAAG+GGG | + | chr7.4:44299410-44299429 | None:intergenic | 50.0% | |
CGAACCATAGCATTCCCAGT+CGG | + | chr7.4:44299382-44299401 | None:intergenic | 50.0% | |
CTACATCACCCAACAAGGTG+GGG | - | chr7.4:44298303-44298322 | MS.gene78237:intron | 50.0% | |
CTGTCCTACATCACCCAACA+AGG | - | chr7.4:44298298-44298317 | MS.gene78237:intron | 50.0% | |
GACCACAATGCAACCGCTAA+TGG | + | chr7.4:44296617-44296636 | None:intergenic | 50.0% | |
GATGTGGACAGGTGACAAAG+AGG | - | chr7.4:44300359-44300378 | MS.gene78237:intron | 50.0% | |
GGAGCGTACACGTGGTATAA+AGG | - | chr7.4:44295794-44295813 | MS.gene78237:CDS | 50.0% | |
GGATAAGACCCTCCCCAAAA+TGG | + | chr7.4:44299818-44299837 | None:intergenic | 50.0% | |
GGTACTTTAACTGCAGGTGC+TGG | - | chr7.4:44300535-44300554 | MS.gene78237:CDS | 50.0% | |
GTCACGCCGTCATTCAAGAT+AGG | - | chr7.4:44299176-44299195 | MS.gene78237:intron | 50.0% | |
GTCCTCCATCCAAAATGGGA+AGG | + | chr7.4:44299412-44299431 | None:intergenic | 50.0% | |
GTGACAAAGAGGGTGGATAC+AGG | - | chr7.4:44300370-44300389 | MS.gene78237:intron | 50.0% | |
GTTATTAAATGTCGCCGGGG+TGG | - | chr7.4:44300559-44300578 | MS.gene78237:CDS | 50.0% | |
TAAGCCGACTGGGAATGCTA+TGG | - | chr7.4:44299375-44299394 | MS.gene78237:intron | 50.0% | |
TACGCAATCACACGGAGAGA+AGG | - | chr7.4:44298948-44298967 | MS.gene78237:intron | 50.0% | |
TAGACACGGGTATTTCCACG+TGG | - | chr7.4:44300134-44300153 | MS.gene78237:intron | 50.0% | |
TCCAGAGGAGATTGCTTCCA+TGG | - | chr7.4:44296082-44296101 | MS.gene78237:intron | 50.0% | |
TCCCATTAGCGGTTGCATTG+TGG | - | chr7.4:44296612-44296631 | MS.gene78237:CDS | 50.0% | |
TCCTACATCACCCAACAAGG+TGG | - | chr7.4:44298301-44298320 | MS.gene78237:intron | 50.0% | |
TGTTGAGGGATGAGACTGGT+GGG | + | chr7.4:44298682-44298701 | None:intergenic | 50.0% | |
TTTGGTCGCAATGCTATCGG+TGG | - | chr7.4:44299079-44299098 | MS.gene78237:intron | 50.0% | |
! | AGGACAATGGCTGATGGTGA+TGG | - | chr7.4:44299427-44299446 | MS.gene78237:intron | 50.0% |
! | ATTGGAAACGGTAATGGCGG+TGG | + | chr7.4:44299542-44299561 | None:intergenic | 50.0% |
! | TCCCAGTCGGCTTACAATCA+TGG | + | chr7.4:44299369-44299388 | None:intergenic | 50.0% |
! | TTGGGGAGGGTCTTATCCAA+AGG | - | chr7.4:44299820-44299839 | MS.gene78237:intron | 50.0% |
!! | CCTCTGAGACACTAGGAAGT+TGG | + | chr7.4:44300015-44300034 | None:intergenic | 50.0% |
!!! | ATCTAGTTTTGGGGTGTCGG+TGG | + | chr7.4:44298534-44298553 | None:intergenic | 50.0% |
!!! | TTGACGGTGCCGTTTTTCCA+TGG | + | chr7.4:44297080-44297099 | None:intergenic | 50.0% |
AAGAGGGTGGATACAGGGTC+CGG | - | chr7.4:44300376-44300395 | MS.gene78237:intron | 55.0% | |
AATGCTATCGGTGGCCGTGA+CGG | - | chr7.4:44299088-44299107 | MS.gene78237:intron | 55.0% | |
ACAGGGTCCGGAGTATGGAA+GGG | - | chr7.4:44300388-44300407 | MS.gene78237:intron | 55.0% | |
AGTGCCAGGTCTTGGGTTCA+CGG | + | chr7.4:44299152-44299171 | None:intergenic | 55.0% | |
CCCACCTTGTTGGGTGATGT+AGG | + | chr7.4:44298305-44298324 | None:intergenic | 55.0% | |
CTACTTCACCCACCACAACG+AGG | - | chr7.4:44299564-44299583 | MS.gene78237:intron | 55.0% | |
GGATGGAGGACAATGGCTGA+TGG | - | chr7.4:44299421-44299440 | MS.gene78237:intron | 55.0% | |
GGTTGGAATTGGAGGTCCGA+GGG | - | chr7.4:44300409-44300428 | MS.gene78237:intron | 55.0% | |
GTGGCTTACCCCACCTTGTT+GGG | + | chr7.4:44298314-44298333 | None:intergenic | 55.0% | |
TACAGGGTCCGGAGTATGGA+AGG | - | chr7.4:44300387-44300406 | MS.gene78237:intron | 55.0% | |
TCAGCACAGTCTGACCCACT+TGG | - | chr7.4:44296489-44296508 | MS.gene78237:CDS | 55.0% | |
TGGACAGGTGACAAAGAGGG+TGG | - | chr7.4:44300363-44300382 | MS.gene78237:intron | 55.0% | |
TGGATACAGGGTCCGGAGTA+TGG | - | chr7.4:44300383-44300402 | MS.gene78237:intron | 55.0% | |
TGTGGCTTACCCCACCTTGT+TGG | + | chr7.4:44298315-44298334 | None:intergenic | 55.0% | |
TTTGGTACCGCCGCAGAAAG+CGG | - | chr7.4:44299035-44299054 | MS.gene78237:intron | 55.0% | |
! | CCCCTTCCCATTTTGGATGG+AGG | - | chr7.4:44299407-44299426 | MS.gene78237:intron | 55.0% |
! | CGGTTGGCTGATTGTGCCAT+TGG | - | chr7.4:44299055-44299074 | MS.gene78237:intron | 55.0% |
! | CGTAGCTCCCCTTCCCATTT+TGG | - | chr7.4:44299400-44299419 | MS.gene78237:intron | 55.0% |
! | GCTCCCCTTCCCATTTTGGA+TGG | - | chr7.4:44299404-44299423 | MS.gene78237:intron | 55.0% |
! | GGGCAAGGTATCTGTTGCCT+TGG | + | chr7.4:44300227-44300246 | None:intergenic | 55.0% |
!! | AGAGGTCCCTCTGAGACACT+AGG | + | chr7.4:44300022-44300041 | None:intergenic | 55.0% |
!! | CAAAAGGGTTCTGAGGGGCA+AGG | + | chr7.4:44300242-44300261 | None:intergenic | 55.0% |
CAGCGCCAGCAGTCATCCAT+TGG | + | chr7.4:44299007-44299026 | None:intergenic | 60.0% | |
GCTGCAGCTCCTCTTCCTGA+TGG | + | chr7.4:44300466-44300485 | None:intergenic | 60.0% | |
GCTGGCGCTGTGACAAGCTT+TGG | - | chr7.4:44299017-44299036 | MS.gene78237:intron | 60.0% | |
GGGTTGGAATTGGAGGTCCG+AGG | - | chr7.4:44300408-44300427 | MS.gene78237:intron | 60.0% | |
GGTCCGGAGTATGGAAGGGT+TGG | - | chr7.4:44300392-44300411 | MS.gene78237:intron | 60.0% | |
GTGCCAGGTCTTGGGTTCAC+GGG | + | chr7.4:44299151-44299170 | None:intergenic | 60.0% | |
TCACGGGGTCGTCGTCTCTT+GGG | + | chr7.4:44299135-44299154 | None:intergenic | 60.0% | |
TGCCAGGTCTTGGGTTCACG+GGG | + | chr7.4:44299150-44299169 | None:intergenic | 60.0% | |
TTCACGGGGTCGTCGTCTCT+TGG | + | chr7.4:44299136-44299155 | None:intergenic | 60.0% | |
! | AGACTGGTGGGTCGGTCATG+TGG | + | chr7.4:44298670-44298689 | None:intergenic | 60.0% |
! | GACTGGTGGGTCGGTCATGT+GGG | + | chr7.4:44298669-44298688 | None:intergenic | 60.0% |
! | GAGGGATGAGACTGGTGGGT+CGG | + | chr7.4:44298678-44298697 | None:intergenic | 60.0% |
!! | GACGGAGAGTGCCAGGTCTT+GGG | + | chr7.4:44299159-44299178 | None:intergenic | 60.0% |
!! | TGACGGAGAGTGCCAGGTCT+TGG | + | chr7.4:44299160-44299179 | None:intergenic | 60.0% |
CAGCCAACCGCTTTCTGCGG+CGG | + | chr7.4:44299045-44299064 | None:intergenic | 65.0% | |
GACCCCGTGAACCCAAGACC+TGG | - | chr7.4:44299145-44299164 | MS.gene78237:intron | 65.0% | |
GTACCGCCGCAGAAAGCGGT+TGG | - | chr7.4:44299039-44299058 | MS.gene78237:intron | 65.0% | |
! | CTATCGGTGGCCGTGACGGA+AGG | - | chr7.4:44299092-44299111 | MS.gene78237:intron | 65.0% |
!! | ACGGCGTGACGGAGAGTGCC+AGG | + | chr7.4:44299166-44299185 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 44295393 | 44300591 | 44295393 | ID=MS.gene78237 |
chr7.4 | mRNA | 44295393 | 44300591 | 44295393 | ID=MS.gene78237.t1;Parent=MS.gene78237 |
chr7.4 | exon | 44300497 | 44300591 | 44300497 | ID=MS.gene78237.t1.exon1;Parent=MS.gene78237.t1 |
chr7.4 | CDS | 44300497 | 44300591 | 44300497 | ID=cds.MS.gene78237.t1;Parent=MS.gene78237.t1 |
chr7.4 | exon | 44300275 | 44300337 | 44300275 | ID=MS.gene78237.t1.exon2;Parent=MS.gene78237.t1 |
chr7.4 | CDS | 44300275 | 44300337 | 44300275 | ID=cds.MS.gene78237.t1;Parent=MS.gene78237.t1 |
chr7.4 | exon | 44299873 | 44299941 | 44299873 | ID=MS.gene78237.t1.exon3;Parent=MS.gene78237.t1 |
chr7.4 | CDS | 44299873 | 44299941 | 44299873 | ID=cds.MS.gene78237.t1;Parent=MS.gene78237.t1 |
chr7.4 | exon | 44296399 | 44297041 | 44296399 | ID=MS.gene78237.t1.exon4;Parent=MS.gene78237.t1 |
chr7.4 | CDS | 44296399 | 44297041 | 44296399 | ID=cds.MS.gene78237.t1;Parent=MS.gene78237.t1 |
chr7.4 | exon | 44296134 | 44296237 | 44296134 | ID=MS.gene78237.t1.exon5;Parent=MS.gene78237.t1 |
chr7.4 | CDS | 44296134 | 44296237 | 44296134 | ID=cds.MS.gene78237.t1;Parent=MS.gene78237.t1 |
chr7.4 | exon | 44295715 | 44295853 | 44295715 | ID=MS.gene78237.t1.exon6;Parent=MS.gene78237.t1 |
chr7.4 | CDS | 44295715 | 44295853 | 44295715 | ID=cds.MS.gene78237.t1;Parent=MS.gene78237.t1 |
chr7.4 | exon | 44295393 | 44295614 | 44295393 | ID=MS.gene78237.t1.exon7;Parent=MS.gene78237.t1 |
chr7.4 | CDS | 44295393 | 44295614 | 44295393 | ID=cds.MS.gene78237.t1;Parent=MS.gene78237.t1 |
Gene Sequence |
Protein sequence |