AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78332

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78332.t1 MTR_7g113960 97.834 277 4 1 1 277 207 481 0.0 545
MS.gene78332.t1 MTR_7g113970 80.392 255 50 0 1 255 242 496 1.60e-151 433
MS.gene78332.t1 MTR_7g113960 97.516 161 2 1 1 161 207 365 2.09e-103 306
MS.gene78332.t1 MTR_4g118610 57.812 256 107 1 1 255 232 487 3.41e-101 304
MS.gene78332.t1 MTR_2g020710 54.688 256 115 1 1 255 140 395 4.85e-97 290
MS.gene78332.t1 MTR_2g020710 54.688 256 115 1 1 255 229 484 5.99e-96 291
MS.gene78332.t1 MTR_7g094110 50.980 255 125 0 1 255 222 476 2.00e-91 279
MS.gene78332.t1 MTR_7g094450 49.020 255 130 0 1 255 220 474 1.48e-87 269
MS.gene78332.t1 MTR_7g113970 79.503 161 33 0 1 161 242 402 2.97e-87 266
MS.gene78332.t1 MTR_7g094110 44.706 255 121 1 1 255 222 456 2.80e-73 231
MS.gene78332.t1 MTR_1g022315 45.525 257 134 2 1 251 130 386 5.91e-71 223
MS.gene78332.t1 MTR_1g022315 45.525 257 134 2 1 251 229 485 6.98e-70 224
MS.gene78332.t1 MTR_8g077310 42.308 260 145 2 1 255 130 389 1.37e-66 212
MS.gene78332.t1 MTR_8g077310 43.077 260 143 3 1 255 227 486 2.51e-65 212
MS.gene78332.t1 MTR_5g020270 43.411 258 141 2 1 253 130 387 8.90e-65 207
MS.gene78332.t1 MTR_5g020270 43.411 258 141 2 1 253 230 487 1.18e-63 207
MS.gene78332.t1 MTR_8g077300 42.146 261 140 3 1 253 219 476 4.87e-60 197
MS.gene78332.t1 MTR_4g118610 53.297 182 84 1 1 181 232 413 7.02e-60 196
MS.gene78332.t1 MTR_2g020710 49.451 182 91 1 1 181 229 410 1.81e-56 187
MS.gene78332.t1 MTR_2g020710 49.724 181 90 1 1 180 229 409 3.52e-56 186
MS.gene78332.t1 MTR_5g020270 39.535 258 130 3 1 253 230 466 2.87e-52 177
MS.gene78332.t1 MTR_2g020710 49.650 143 71 1 1 142 229 371 4.86e-40 143
MS.gene78332.t1 MTR_7g082270 34.351 262 151 7 4 256 255 504 4.07e-39 143
MS.gene78332.t1 MTR_6g018790 33.977 259 154 6 4 255 295 543 6.87e-39 143
MS.gene78332.t1 MTR_7g094420 45.098 153 63 1 67 219 4 135 5.56e-38 130
MS.gene78332.t1 MTR_4g077740 32.700 263 158 6 2 252 243 498 3.87e-34 129
MS.gene78332.t1 MTR_7g446340 30.496 282 167 8 5 268 246 516 8.10e-33 126
MS.gene78332.t1 MTR_6g007340 30.496 282 167 8 5 268 246 516 8.10e-33 126
MS.gene78332.t1 MTR_7g021390 54.902 102 29 2 154 255 58 142 1.06e-32 117
MS.gene78332.t1 MTR_1g116650 31.855 248 138 5 18 251 279 509 1.94e-28 114
MS.gene78332.t1 MTR_3g084110 34.052 232 143 5 29 250 240 471 2.04e-28 113
MS.gene78332.t1 MTR_7g005910 32.258 248 147 6 19 251 235 476 3.77e-28 112
MS.gene78332.t1 MTR_1g116660 32.500 240 152 6 22 251 240 479 4.66e-28 112
MS.gene78332.t1 MTR_7g082270 34.158 202 117 5 4 199 255 446 6.82e-27 108
MS.gene78332.t1 MTR_8g077310 37.500 168 103 2 1 166 227 394 1.71e-26 107
MS.gene78332.t1 MTR_2g013310 30.739 257 165 6 5 251 171 424 4.15e-25 103
MS.gene78332.t1 MTR_2g013310 30.739 257 165 6 5 251 244 497 5.29e-25 104
MS.gene78332.t1 MTR_3g074340 25.882 255 180 3 4 250 63 316 1.59e-24 100
MS.gene78332.t1 MTR_3g074370 25.882 255 180 3 4 250 63 316 1.76e-24 100
MS.gene78332.t1 MTR_4g069500 32.663 199 128 3 61 253 103 301 2.09e-24 100
MS.gene78332.t1 MTR_3g116240 31.034 203 134 3 61 257 292 494 2.80e-24 102
MS.gene78332.t1 MTR_4g013205 30.075 266 168 7 2 260 224 478 7.02e-24 100
MS.gene78332.t1 MTR_3g118530 32.558 215 128 4 48 248 510 721 9.46e-24 100
MS.gene78332.t1 MTR_4g069500 32.663 199 128 3 61 253 292 490 1.57e-23 100
MS.gene78332.t1 MTR_4g069500 32.663 199 128 3 61 253 242 440 1.78e-23 99.4
MS.gene78332.t1 MTR_3g074320 25.490 255 181 3 4 250 63 316 1.82e-23 98.2
MS.gene78332.t1 MTR_6g087910 27.273 264 174 6 2 258 238 490 8.01e-23 97.8
MS.gene78332.t1 MTR_3g074410 25.292 257 181 3 4 251 232 486 8.07e-23 97.8
MS.gene78332.t1 MTR_5g044910 32.547 212 118 4 55 248 497 701 1.22e-22 97.8
MS.gene78332.t1 MTR_8g073100 33.641 217 125 5 47 248 487 699 2.08e-22 97.1
MS.gene78332.t1 MTR_5g024740 31.250 208 126 3 55 248 499 703 3.35e-22 96.3
MS.gene78332.t1 MTR_5g006070 27.273 253 176 4 4 250 185 435 4.49e-22 95.5
MS.gene78332.t1 MTR_5g006070 27.273 253 176 4 4 250 233 483 6.85e-22 95.1
MS.gene78332.t1 MTR_3g074390 26.641 259 173 5 4 250 235 488 7.00e-22 95.1
MS.gene78332.t1 MTR_3g008160 27.200 250 175 4 7 251 188 435 2.53e-21 93.2
MS.gene78332.t1 MTR_3g008160 27.200 250 175 4 7 251 237 484 4.31e-21 92.8
MS.gene78332.t1 MTR_3g116060 31.754 211 119 5 56 248 508 711 6.58e-21 92.8
MS.gene78332.t1 MTR_1g104780 27.668 253 175 4 4 250 233 483 4.43e-20 90.1
MS.gene78332.t1 MTR_4g072030 29.612 206 133 4 61 257 288 490 4.53e-20 90.1
MS.gene78332.t1 MTR_8g077890 30.222 225 149 4 57 275 279 501 1.20e-19 88.6
MS.gene78332.t1 MTR_8g102860 26.848 257 172 7 4 250 183 433 1.21e-19 88.6
MS.gene78332.t1 MTR_3g074270 24.400 250 169 3 4 250 230 462 2.07e-19 87.8
MS.gene78332.t1 MTR_8g102860 26.848 257 172 7 4 250 235 485 2.46e-19 87.8
MS.gene78332.t1 MTR_5g077580 28.000 275 148 6 31 255 277 551 3.80e-19 87.4
MS.gene78332.t1 MTR_4g091370 28.125 256 174 4 4 251 233 486 3.99e-19 87.0
MS.gene78332.t1 MTR_4g116770 27.820 266 171 7 4 257 433 689 4.58e-19 87.0
MS.gene78332.t1 MTR_0204s0040 27.820 266 171 7 4 257 237 493 6.36e-19 86.7
MS.gene78332.t1 MTR_3g093060 23.864 264 189 5 4 257 186 447 8.38e-19 85.9
MS.gene78332.t1 MTR_5g075300 30.049 203 132 4 57 251 279 479 1.19e-18 85.9
MS.gene78332.t1 MTR_3g007910 25.490 255 162 5 4 250 219 453 2.75e-18 84.7
MS.gene78332.t1 MTR_3g008170 24.400 250 183 3 7 251 237 485 4.50e-18 84.0
MS.gene78332.t1 MTR_3g080240 25.385 260 180 6 2 255 281 532 4.72e-18 84.0
MS.gene78332.t1 MTR_0204s0020 25.969 258 172 6 4 250 226 475 4.99e-18 84.0
MS.gene78332.t1 MTR_0204s0020 25.969 258 172 6 4 250 229 478 6.06e-18 83.6
MS.gene78332.t1 MTR_1g104750 24.800 250 180 4 7 250 236 483 3.65e-17 81.3
MS.gene78332.t1 MTR_1g104770 25.969 258 175 6 7 254 237 488 7.19e-17 80.5
MS.gene78332.t1 MTR_4g116790 26.667 255 174 6 4 250 235 484 9.86e-17 80.1
MS.gene78332.t1 MTR_3g023480 26.923 260 172 6 4 251 232 485 9.88e-17 80.1
MS.gene78332.t1 MTR_6g088450 29.353 201 132 4 54 246 304 502 1.15e-16 80.1
MS.gene78332.t1 MTR_5g041550 26.493 268 177 8 4 257 234 495 1.43e-16 79.7
MS.gene78332.t1 MTR_0009s0370 25.769 260 175 7 4 251 232 485 3.54e-16 78.6
MS.gene78332.t1 MTR_3g093010 25.581 258 176 5 4 250 233 485 4.27e-16 78.2
MS.gene78332.t1 MTR_6g087040 28.295 258 167 8 4 250 235 485 9.90e-16 77.0
MS.gene78332.t1 MTR_6g088375 28.295 258 167 8 4 250 235 485 9.90e-16 77.0
MS.gene78332.t1 MTR_4g090600 27.413 259 170 6 4 250 233 485 7.14e-15 74.7
MS.gene78332.t1 MTR_5g019870 27.803 223 150 4 55 269 272 491 2.14e-14 73.2
MS.gene78332.t1 MTR_5g094760 27.059 255 173 5 4 250 235 484 3.25e-14 72.8
MS.gene78332.t1 MTR_4g064820 32.530 166 95 4 7 162 303 461 3.65e-14 72.4
MS.gene78332.t1 MTR_2g049020 39.216 102 61 1 154 254 452 553 9.84e-14 71.2
MS.gene78332.t1 MTR_2g049020 28.221 163 102 5 2 155 215 371 5.19e-11 63.2
MS.gene78332.t1 MTR_7g118110 27.933 179 79 6 42 217 130 261 1.30e-13 70.5
MS.gene78332.t1 MTR_8g103500 29.268 205 134 3 55 251 267 468 1.61e-13 70.5
MS.gene78332.t1 MTR_5g077590 26.780 295 160 12 3 244 95 386 7.07e-13 68.6
MS.gene78332.t1 MTR_7g091690 26.953 256 172 6 4 250 235 484 7.11e-13 68.6
MS.gene78332.t1 MTR_2g026160 36.792 106 62 3 153 255 454 557 2.18e-12 67.4
MS.gene78332.t1 MTR_1g038600 25.483 259 176 6 4 251 214 466 3.01e-12 66.6
MS.gene78332.t1 MTR_1g038630 25.097 259 177 6 4 251 232 484 4.16e-12 66.2
MS.gene78332.t1 MTR_5g082540 25.869 259 175 6 4 251 232 484 4.52e-12 66.2
MS.gene78332.t1 MTR_2g048720 29.012 162 103 5 2 157 215 370 1.53e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78332.t1 AT1G54730 69.020 255 79 0 1 255 212 466 3.33e-122 357
MS.gene78332.t1 AT1G54730 61.569 255 77 1 1 255 212 445 5.13e-102 305
MS.gene78332.t1 AT1G54730 68.610 223 70 0 1 223 212 434 1.96e-101 303
MS.gene78332.t1 AT2G48020 52.344 256 122 0 1 256 208 463 4.48e-96 290
MS.gene78332.t1 AT2G48020 52.344 256 122 0 1 256 208 463 4.48e-96 290
MS.gene78332.t1 AT5G18840 54.297 256 116 1 1 255 224 479 6.97e-89 272
MS.gene78332.t1 AT3G05160 47.059 255 135 0 1 255 152 406 1.30e-85 262
MS.gene78332.t1 AT3G05160 47.059 255 135 0 1 255 152 406 1.30e-85 262
MS.gene78332.t1 AT3G05150 52.174 253 120 1 3 254 217 469 4.89e-85 262
MS.gene78332.t1 AT3G05150 52.174 253 120 1 3 254 217 469 4.89e-85 262
MS.gene78332.t1 AT3G05160 47.059 255 135 0 1 255 201 455 6.59e-85 261
MS.gene78332.t1 AT3G05150 52.174 253 120 1 3 254 217 469 7.91e-85 262
MS.gene78332.t1 AT4G04760 49.804 255 125 1 1 252 152 406 1.05e-83 257
MS.gene78332.t1 AT4G04760 49.804 255 125 1 1 252 211 465 6.12e-83 257
MS.gene78332.t1 AT5G27360 48.031 254 132 0 1 254 111 364 6.46e-82 251
MS.gene78332.t1 AT5G27360 48.031 254 132 0 1 254 111 364 6.46e-82 251
MS.gene78332.t1 AT4G04750 49.416 257 128 1 1 255 216 472 1.36e-81 254
MS.gene78332.t1 AT4G04750 49.416 257 128 1 1 255 216 472 1.36e-81 254
MS.gene78332.t1 AT3G05165 47.059 255 135 0 1 255 210 464 1.65e-81 253
MS.gene78332.t1 AT3G05165 47.059 255 135 0 1 255 210 464 1.65e-81 253
MS.gene78332.t1 AT3G05165 47.059 255 135 0 1 255 210 464 1.65e-81 253
MS.gene78332.t1 AT1G54730 60.090 223 68 1 1 223 212 413 2.15e-81 251
MS.gene78332.t1 AT4G04750 49.416 257 128 1 1 255 260 516 2.79e-81 254
MS.gene78332.t1 AT5G27360 48.031 254 132 0 1 254 215 468 6.08e-81 252
MS.gene78332.t1 AT5G27360 48.031 254 132 0 1 254 263 516 2.57e-80 251
MS.gene78332.t1 AT5G27350 48.819 254 130 0 1 254 211 464 1.47e-79 248
MS.gene78332.t1 AT1G08930 47.059 255 135 0 1 255 238 492 6.21e-79 247
MS.gene78332.t1 AT1G08930 47.059 255 135 0 1 255 238 492 6.21e-79 247
MS.gene78332.t1 AT3G05400 45.850 253 137 0 1 253 186 438 4.34e-78 243
MS.gene78332.t1 AT1G54730 68.108 185 59 0 1 185 212 396 4.44e-78 243
MS.gene78332.t1 AT1G54730 68.108 185 59 0 1 185 212 396 4.44e-78 243
MS.gene78332.t1 AT3G05400 45.850 253 137 0 1 253 206 458 5.96e-78 244
MS.gene78332.t1 AT1G08920 46.693 257 137 0 1 257 212 468 1.49e-76 240
MS.gene78332.t1 AT1G08920 45.455 264 137 1 1 257 212 475 2.60e-74 235
MS.gene78332.t1 AT1G08900 46.850 254 135 0 1 254 163 416 2.63e-74 233
MS.gene78332.t1 AT1G08900 46.850 254 135 0 1 254 205 458 5.85e-74 233
MS.gene78332.t1 AT1G08900 46.850 254 135 0 1 254 205 458 5.85e-74 233
MS.gene78332.t1 AT1G08900 46.850 254 135 0 1 254 197 450 6.30e-74 233
MS.gene78332.t1 AT3G20460 46.275 255 137 0 1 255 233 487 2.33e-73 233
MS.gene78332.t1 AT1G08890 47.843 255 131 2 1 254 207 460 1.51e-72 230
MS.gene78332.t1 AT4G04760 46.693 257 127 3 1 252 211 462 2.52e-70 224
MS.gene78332.t1 AT3G05155 44.531 256 138 2 1 255 207 459 3.71e-70 223
MS.gene78332.t1 AT3G05165 45.089 224 123 0 1 224 210 433 4.19e-66 214
MS.gene78332.t1 AT1G19450 42.966 263 133 4 1 252 229 485 1.54e-63 207
MS.gene78332.t1 AT1G75220 42.308 260 139 3 1 252 228 484 4.12e-62 203
MS.gene78332.t1 AT1G54730 57.838 185 57 1 1 185 212 375 3.61e-58 191
MS.gene78332.t1 AT1G08920 44.292 219 122 0 1 219 212 430 7.66e-58 191
MS.gene78332.t1 AT3G05165 43.810 210 118 0 1 210 210 419 3.58e-57 190
MS.gene78332.t1 AT3G05165 43.810 210 118 0 1 210 210 419 3.58e-57 190
MS.gene78332.t1 AT1G08900 43.836 219 123 0 1 219 205 423 8.24e-57 188
MS.gene78332.t1 AT1G54730 67.480 123 40 0 1 123 212 334 7.56e-48 162
MS.gene78332.t1 AT2G48020 45.963 161 87 0 1 161 208 368 8.56e-46 158
MS.gene78332.t1 AT5G27360 41.714 175 102 0 1 175 215 389 5.90e-43 152
MS.gene78332.t1 AT3G03090 34.677 248 149 4 12 252 259 500 5.49e-36 134
MS.gene78332.t1 AT5G17010 35.573 253 150 6 7 252 254 500 1.41e-35 133
MS.gene78332.t1 AT5G17010 35.573 253 150 6 7 252 254 500 1.41e-35 133
MS.gene78332.t1 AT5G17010 35.573 253 150 6 7 252 254 500 1.41e-35 133
MS.gene78332.t1 AT2G48020 47.581 124 65 0 1 124 208 331 2.76e-34 127
MS.gene78332.t1 AT5G16150 33.463 257 158 6 4 255 295 543 9.25e-34 129
MS.gene78332.t1 AT5G16150 33.463 257 158 6 4 255 295 543 9.25e-34 129
MS.gene78332.t1 AT5G16150 33.463 257 158 6 4 255 295 543 9.25e-34 129
MS.gene78332.t1 AT1G54730 62.745 102 38 0 1 102 212 313 5.02e-33 123
MS.gene78332.t1 AT1G54730 62.745 102 38 0 1 102 212 313 5.02e-33 123
MS.gene78332.t1 AT5G59250 32.558 258 158 5 7 254 305 556 6.48e-32 124
MS.gene78332.t1 AT2G43330 31.061 264 154 8 7 251 222 476 7.76e-27 109
MS.gene78332.t1 AT2G20780 29.845 258 166 5 4 251 245 497 4.72e-26 107
MS.gene78332.t1 AT2G20780 29.845 258 166 5 4 251 187 439 5.95e-26 106
MS.gene78332.t1 AT1G67300 29.845 258 170 5 2 254 239 490 1.17e-25 105
MS.gene78332.t1 AT1G67300 30.651 261 163 7 2 254 239 489 2.76e-25 104
MS.gene78332.t1 AT1G67300 30.651 261 163 7 2 254 239 489 2.76e-25 104
MS.gene78332.t1 AT3G18830 27.542 236 151 4 55 270 293 528 2.84e-24 102
MS.gene78332.t1 AT4G35300 33.810 210 118 4 55 248 319 523 6.43e-24 101
MS.gene78332.t1 AT4G35300 33.810 210 118 4 55 248 516 720 1.70e-23 100
MS.gene78332.t1 AT4G35300 33.810 210 118 4 55 248 516 720 1.70e-23 100
MS.gene78332.t1 AT4G35300 33.810 210 118 4 55 248 516 720 1.70e-23 100
MS.gene78332.t1 AT4G35300 33.810 210 118 4 55 248 516 720 1.70e-23 100
MS.gene78332.t1 AT4G35300 33.810 210 118 4 55 248 516 720 1.70e-23 100
MS.gene78332.t1 AT4G35300 33.810 210 118 4 55 248 516 720 1.70e-23 100
MS.gene78332.t1 AT4G35300 33.810 210 118 4 55 248 516 720 1.70e-23 100
MS.gene78332.t1 AT4G35300 33.810 210 118 4 55 248 506 710 1.77e-23 100
MS.gene78332.t1 AT4G35300 33.810 210 118 4 55 248 506 710 1.77e-23 100
MS.gene78332.t1 AT4G35300 33.810 210 118 4 55 248 506 710 1.77e-23 100
MS.gene78332.t1 AT3G05155 42.276 123 68 1 1 123 207 326 2.35e-23 97.4
MS.gene78332.t1 AT3G51490 31.628 215 116 5 55 248 510 714 3.58e-23 99.4
MS.gene78332.t1 AT3G51490 31.628 215 116 5 55 248 460 664 4.53e-23 99.0
MS.gene78332.t1 AT1G79820 29.502 261 164 5 2 254 242 490 1.35e-22 97.1
MS.gene78332.t1 AT1G79820 29.502 261 164 5 2 254 242 490 1.35e-22 97.1
MS.gene78332.t1 AT1G05030 27.273 264 182 5 2 261 267 524 1.48e-21 94.4
MS.gene78332.t1 AT1G05030 27.170 265 183 5 1 261 214 472 2.19e-21 93.6
MS.gene78332.t1 AT1G20840 31.731 208 125 3 55 248 509 713 1.54e-20 91.7
MS.gene78332.t1 AT1G20840 31.731 208 125 3 55 248 509 713 1.54e-20 91.7
MS.gene78332.t1 AT3G51490 33.178 214 106 6 55 248 510 706 2.14e-20 91.3
MS.gene78332.t1 AT5G26340 26.846 298 187 7 4 275 234 526 3.64e-20 90.1
MS.gene78332.t1 AT2G16130 29.954 217 137 5 61 267 289 500 7.06e-20 89.4
MS.gene78332.t1 AT2G16120 28.636 220 143 5 61 270 289 504 2.36e-19 87.8
MS.gene78332.t1 AT5G61520 27.668 253 174 5 4 250 190 439 6.68e-19 86.3
MS.gene78332.t1 AT5G26250 27.734 256 176 5 5 254 231 483 8.72e-19 86.3
MS.gene78332.t1 AT4G36670 28.431 204 140 3 55 252 274 477 9.04e-19 86.3
MS.gene78332.t1 AT5G61520 27.668 253 174 5 4 250 238 487 9.62e-19 86.3
MS.gene78332.t1 AT1G50310 24.903 257 179 6 4 250 91 343 1.07e-17 82.4
MS.gene78332.t1 AT1G11260 26.641 259 172 6 4 250 233 485 1.70e-17 82.4
MS.gene78332.t1 AT1G67300 30.097 206 127 6 2 200 239 434 2.90e-17 81.6
MS.gene78332.t1 AT1G67300 30.097 206 127 6 2 200 239 434 2.90e-17 81.6
MS.gene78332.t1 AT1G50310 24.903 257 179 6 4 250 234 486 2.91e-17 81.6
MS.gene78332.t1 AT4G21480 27.413 259 172 6 4 251 231 484 3.59e-17 81.3
MS.gene78332.t1 AT3G05960 26.378 254 178 5 7 254 232 482 8.21e-17 80.5
MS.gene78332.t1 AT1G77210 27.451 255 173 7 4 250 86 336 1.56e-16 79.0
MS.gene78332.t1 AT1G77210 27.451 255 173 7 4 250 235 485 3.84e-16 78.6
MS.gene78332.t1 AT1G77210 27.451 255 173 7 4 250 235 485 3.84e-16 78.6
MS.gene78332.t1 AT1G79820 28.502 207 129 4 2 201 242 436 4.83e-16 78.2
MS.gene78332.t1 AT4G02050 26.667 255 174 6 4 250 235 484 5.11e-16 78.2
MS.gene78332.t1 AT4G02050 26.667 255 174 6 4 250 235 484 5.11e-16 78.2
MS.gene78332.t1 AT2G18480 29.208 202 134 4 57 251 281 480 5.17e-16 78.2
MS.gene78332.t1 AT3G19940 24.706 255 181 6 4 250 234 485 1.78e-15 76.6
MS.gene78332.t1 AT1G34580 25.483 259 179 5 4 250 181 437 1.95e-15 76.3
MS.gene78332.t1 AT1G34580 25.483 259 179 5 4 250 231 487 3.35e-15 75.5
MS.gene78332.t1 AT1G07340 27.969 261 165 8 4 250 230 481 1.28e-14 73.9
MS.gene78332.t1 AT1G67300 29.648 199 123 6 2 193 239 427 1.77e-14 73.2
MS.gene78332.t1 AT1G67300 29.648 199 123 6 2 193 239 427 1.77e-14 73.2
MS.gene78332.t1 AT5G23270 25.758 264 167 7 4 250 235 486 1.90e-14 73.6
MS.gene78332.t1 AT1G30220 37.255 102 63 1 155 255 456 557 8.25e-14 71.6
MS.gene78332.t1 AT4G16480 35.922 103 65 1 154 255 459 561 2.71e-13 70.1
MS.gene78332.t1 AT4G16480 35.922 103 65 1 154 255 459 561 2.71e-13 70.1
MS.gene78332.t1 AT4G16480 35.922 103 65 1 154 255 459 561 2.71e-13 70.1
MS.gene78332.t1 AT2G35740 37.255 102 63 1 154 254 458 559 2.76e-13 70.1
MS.gene78332.t1 AT1G79820 32.903 155 92 3 105 254 295 442 3.97e-13 69.3
MS.gene78332.t1 AT1G79820 32.903 155 92 3 105 254 233 380 8.07e-13 68.2
MS.gene78332.t1 AT3G19930 25.194 258 178 7 4 251 232 484 6.10e-12 65.9
MS.gene78332.t1 AT3G19930 25.194 258 178 7 4 251 232 484 6.10e-12 65.9

Find 65 sgRNAs with CRISPR-Local

Find 137 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTCACTGGTTGTGTTCT+TGG 0.226899 7.1:+2568510 MS.gene78332:CDS
TGCTATTGTTCCAATACTTC+TGG 0.234236 7.1:-2567541 None:intergenic
TATGCATGCAATTCTGTTAC+AGG 0.251586 7.1:-2568879 None:intergenic
ATATGCAGGACTTGCATAAA+TGG 0.275987 7.1:+2567997 MS.gene78332:intron
TTGTTGGATACTGTCTGATA+TGG 0.318096 7.1:-2568834 None:intergenic
AATAGCAATGGTTGTTGTTC+AGG 0.339658 7.1:+2567557 MS.gene78332:CDS
TGCCAAATTCATCTCTTTGT+TGG 0.339996 7.1:-2568850 None:intergenic
ATCCAACAAAGAGATGAATT+TGG 0.340305 7.1:+2568848 MS.gene78332:CDS
GAAGGAATTCAGTCCCATTC+TGG 0.348944 7.1:+2568019 MS.gene78332:CDS
CAAACTGTTGTAGTATTATC+AGG 0.367972 7.1:-2567220 None:intergenic
ATAGATCCCAATGACAGCTT+TGG 0.374563 7.1:+2567709 MS.gene78332:intron
AGCAGAACCCTTCACATTGA+TGG 0.376678 7.1:-2568471 None:intergenic
AATCCACTTTACAGCACCTT+AGG 0.388303 7.1:+2566882 MS.gene78332:CDS
ATTACTCCCAAAGCTGTCAT+TGG 0.396470 7.1:-2567716 None:intergenic
TTCTTCTAGCGTACGCCCCT+TGG 0.400544 7.1:-2568793 None:intergenic
CAACAGTTTGGCGGAGTTAA+CGG 0.405022 7.1:+2567233 MS.gene78332:CDS
TAGATCCCAATGACAGCTTT+GGG 0.408715 7.1:+2567710 MS.gene78332:intron
GCAGGCAAAGGTTGGTCGCT+TGG 0.414342 7.1:+2566850 None:intergenic
TCTGGCACTCGTCGGTGTAC+TGG 0.423682 7.1:+2568037 MS.gene78332:CDS
AGTTCTATATTTGTCTCTGC+TGG 0.432640 7.1:+2567272 MS.gene78332:CDS
GCTTTGTTACATTTGTTCAC+TGG 0.446450 7.1:+2568498 MS.gene78332:CDS
AGCGTACGCCCCTTGGTCTC+TGG 0.452619 7.1:-2568786 None:intergenic
ATCAATGTGAAGGGTTCTGC+TGG 0.456001 7.1:+2568473 MS.gene78332:CDS
ATCCACTTTACAGCACCTTA+GGG 0.481918 7.1:+2566883 MS.gene78332:CDS
TTCATATTCTCTAGCATCTG+TGG 0.483621 7.1:+2568732 MS.gene78332:CDS
CTGATAATACTACAACAGTT+TGG 0.484038 7.1:+2567221 MS.gene78332:CDS
CATAATAATCAGGTATATAC+CGG 0.492927 7.1:+2568308 MS.gene78332:intron
TCCCCTAAGGTGCTGTAAAG+TGG 0.493199 7.1:-2566885 None:intergenic
CGGATCTTTCTCACTTGGCA+TGG 0.497102 7.1:+2568328 MS.gene78332:CDS
TTACTCCCAAAGCTGTCATT+GGG 0.497965 7.1:-2567715 None:intergenic
TCTGCATCAGGAACATGCTT+AGG 0.498862 7.1:+2567856 MS.gene78332:CDS
CTCATGAGTTGGAATTCAGC+AGG 0.499619 7.1:+2568557 MS.gene78332:CDS
TCACATTGTTAGGTAGGAGT+TGG 0.508953 7.1:+2567197 MS.gene78332:intron
ATTATACAGATCTCTGCATC+AGG 0.511602 7.1:+2567844 MS.gene78332:intron
GAATGTTGATATTTCTGAAG+AGG 0.522673 7.1:+2566910 MS.gene78332:CDS
GATATTTCCCATCAATGTGA+AGG 0.523629 7.1:+2568463 MS.gene78332:intron
TATCAACATTCTTTCCCCTA+AGG 0.526789 7.1:-2566898 None:intergenic
TTGGCATGGGAGGAATACCC+TGG 0.527653 7.1:+2568342 MS.gene78332:CDS
GCAGAACCCTTCACATTGAT+GGG 0.528455 7.1:-2568470 None:intergenic
GGATCTTTCTCACTTGGCAT+GGG 0.535076 7.1:+2568329 MS.gene78332:CDS
CAAAGGTTGGTCGCTTGGAA+AGG 0.543452 7.1:+2566855 MS.gene78332:CDS
TACACCGACGAGTGCCAGAA+TGG 0.544851 7.1:-2568033 None:intergenic
ATTGTTCTGCAGGCAAAGGT+TGG 0.546143 7.1:+2566842 None:intergenic
TCTTTCTCACTTGGCATGGG+AGG 0.546522 7.1:+2568332 MS.gene78332:CDS
CATGCCAAGTGAGAAAGATC+CGG 0.555741 7.1:-2568327 None:intergenic
ACACCGACGAGTGCCAGAAT+GGG 0.557562 7.1:-2568032 None:intergenic
ATTACATACTCTAATTTCAG+TGG 0.575662 7.1:-2566933 None:intergenic
TATACCGGATCTTTCTCACT+TGG 0.576596 7.1:+2568323 MS.gene78332:CDS
AGCTTCTGTTTGCTGCTGAG+AGG 0.578800 7.1:-2567064 None:intergenic
GCAGGACTTGCATAAATGGA+AGG 0.583428 7.1:+2568001 MS.gene78332:intron
ACCTCAGACATTATAACCCA+GGG 0.595175 7.1:-2568359 None:intergenic
ATATTTCCCATCAATGTGAA+GGG 0.595917 7.1:+2568464 MS.gene78332:CDS
ATAATACTACAACAGTTTGG+CGG 0.603039 7.1:+2567224 MS.gene78332:CDS
TACCTCAGACATTATAACCC+AGG 0.616486 7.1:-2568360 None:intergenic
AGTCCCATTCTGGCACTCGT+CGG 0.621294 7.1:+2568029 MS.gene78332:CDS
AACTAGTACCAGAGACCAAG+GGG 0.634126 7.1:+2568778 MS.gene78332:CDS
CTGCTGAATTCCAACTCATG+AGG 0.635484 7.1:-2568556 None:intergenic
AAGTATTGGAACAATAGCAA+TGG 0.641668 7.1:+2567545 MS.gene78332:CDS
AAAACTAGTACCAGAGACCA+AGG 0.643814 7.1:+2568776 MS.gene78332:CDS
AAAAGAATGACAGAGATACA+AGG 0.644048 7.1:-2567885 None:intergenic
ACCCTGGGTTATAATGTCTG+AGG 0.647294 7.1:+2568358 MS.gene78332:CDS
TGGCATGGGAGGAATACCCT+GGG 0.647522 7.1:+2568343 MS.gene78332:CDS
AAACTAGTACCAGAGACCAA+GGG 0.649846 7.1:+2568777 MS.gene78332:CDS
TTGCTACAAATAGAATGGTG+AGG 0.651966 7.1:-2568755 None:intergenic
TCCACTTTACAGCACCTTAG+GGG 0.658562 7.1:+2566884 MS.gene78332:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAATATGTTACACTTTT+AGG - chr7.1:2567013-2567032 None:intergenic 15.0%
!!! TTAATGTATTATTTTTTACC+AGG + chr7.1:2568702-2568721 MS.gene78332:intron 15.0%
!! AAAAAATGATTATCAAGATG+AGG - chr7.1:2568437-2568456 None:intergenic 20.0%
!! AAGAAAACAAAAAATCAGAA+AGG + chr7.1:2568610-2568629 MS.gene78332:intron 20.0%
!! AATAGAATTATTAATTCTGC+TGG - chr7.1:2567369-2567388 None:intergenic 20.0%
!! ATCTTATTCATCATATTAAG+AGG - chr7.1:2567619-2567638 None:intergenic 20.0%
!! ATTTAGTTACCATAATAATC+AGG + chr7.1:2568298-2568317 MS.gene78332:intron 20.0%
!! ATTTCATGAATGCAAATATA+AGG - chr7.1:2568211-2568230 None:intergenic 20.0%
!! TAAAAATATGCAGATTCTTA+TGG + chr7.1:2567167-2567186 MS.gene78332:intron 20.0%
!! TGATTATTATGGTAACTAAA+TGG - chr7.1:2568299-2568318 None:intergenic 20.0%
!!! AACTTTCTCTATTTTAAATG+TGG + chr7.1:2568141-2568160 MS.gene78332:intron 20.0%
!!! ATTTTTTGTTTTCTTCTAGA+GGG - chr7.1:2568605-2568624 None:intergenic 20.0%
!!! CTATTTTCTCAAATTATTAC+TGG + chr7.1:2567384-2567403 MS.gene78332:intron 20.0%
!!! TTTATACACTTACTTTTTGT+AGG + chr7.1:2567029-2567048 MS.gene78332:intron 20.0%
! ATTACATACTCTAATTTCAG+TGG - chr7.1:2566936-2566955 None:intergenic 25.0%
! ATTACATGATTCTCATGAAA+GGG + chr7.1:2567492-2567511 MS.gene78332:intron 25.0%
! ATTTACAGAATAGCATGAAA+AGG - chr7.1:2567805-2567824 None:intergenic 25.0%
! CATAATAATCAGGTATATAC+CGG + chr7.1:2568308-2568327 MS.gene78332:intron 25.0%
! TAAGATAAGATGCATGAATT+GGG - chr7.1:2567149-2567168 None:intergenic 25.0%
! TATGATGAATAAGATGAGAT+AGG + chr7.1:2567624-2567643 MS.gene78332:intron 25.0%
! TATTACATGATTCTCATGAA+AGG + chr7.1:2567491-2567510 MS.gene78332:intron 25.0%
! TTAAGATAAGATGCATGAAT+TGG - chr7.1:2567150-2567169 None:intergenic 25.0%
!! AAACAGAAGCTAACATTTTT+GGG + chr7.1:2567076-2567095 MS.gene78332:CDS 25.0%
!! TAATCGTTTTACCAGTAAAA+GGG - chr7.1:2567768-2567787 None:intergenic 25.0%
!! TGGTAAAGTTAAAAGGTATA+TGG + chr7.1:2568258-2568277 MS.gene78332:intron 25.0%
!! TTAATCGTTTTACCAGTAAA+AGG - chr7.1:2567769-2567788 None:intergenic 25.0%
!!! AAATCAGAGAAAGTATTAGT+AGG - chr7.1:2568180-2568199 None:intergenic 25.0%
!!! GATTTTTTGTTTTCTTCTAG+AGG - chr7.1:2568606-2568625 None:intergenic 25.0%
!!! GTAATTTTGATGGATAAATC+TGG + chr7.1:2567734-2567753 MS.gene78332:CDS 25.0%
!!! TAGTTTTGCTACAAATAGAA+TGG - chr7.1:2568763-2568782 None:intergenic 25.0%
AAAAGAATGACAGAGATACA+AGG - chr7.1:2567888-2567907 None:intergenic 30.0%
AAATTACTGAACAGTGTGAA+GGG - chr7.1:2567681-2567700 None:intergenic 30.0%
ATAATACTACAACAGTTTGG+CGG + chr7.1:2567224-2567243 MS.gene78332:CDS 30.0%
ATATTTCCCATCAATGTGAA+GGG + chr7.1:2568464-2568483 MS.gene78332:CDS 30.0%
ATCCAACAAAGAGATGAATT+TGG + chr7.1:2568848-2568867 MS.gene78332:CDS 30.0%
ATTTAGTCACATTGTTAGGT+AGG + chr7.1:2567191-2567210 MS.gene78332:intron 30.0%
CAAACTGTTGTAGTATTATC+AGG - chr7.1:2567223-2567242 None:intergenic 30.0%
CATGAATGCAAATATAAGGT+TGG - chr7.1:2568207-2568226 None:intergenic 30.0%
CGGTATATACCTGATTATTA+TGG - chr7.1:2568310-2568329 None:intergenic 30.0%
CTGATAATACTACAACAGTT+TGG + chr7.1:2567221-2567240 MS.gene78332:CDS 30.0%
GAAAATTCTTATCCATCACA+GGG + chr7.1:2567514-2567533 MS.gene78332:intron 30.0%
GAATGAAGTCTTGAAAAGTA+GGG + chr7.1:2568647-2568666 MS.gene78332:intron 30.0%
TAGCATATGACATGTAAAGA+AGG + chr7.1:2567443-2567462 MS.gene78332:intron 30.0%
TGAATGAAGTCTTGAAAAGT+AGG + chr7.1:2568646-2568665 MS.gene78332:intron 30.0%
TGGTATTTAGTCACATTGTT+AGG + chr7.1:2567187-2567206 MS.gene78332:intron 30.0%
TTGCATTCATGAAATAGACT+TGG + chr7.1:2568216-2568235 MS.gene78332:intron 30.0%
! AATCGTTTTACCAGTAAAAG+GGG - chr7.1:2567767-2567786 None:intergenic 30.0%
! ATTGTTTTCTTCCAATATGC+AGG + chr7.1:2567983-2568002 MS.gene78332:intron 30.0%
! CAAACAGAAGCTAACATTTT+TGG + chr7.1:2567075-2567094 MS.gene78332:CDS 30.0%
! GAATGTTGATATTTCTGAAG+AGG + chr7.1:2566910-2566929 MS.gene78332:CDS 30.0%
!! AAGTATTGGAACAATAGCAA+TGG + chr7.1:2567545-2567564 MS.gene78332:CDS 30.0%
!! GACTTATAAATCGGTTTTGT+AGG - chr7.1:2568100-2568119 None:intergenic 30.0%
AAAATTTGCATACCCAGTGA+AGG - chr7.1:2568393-2568412 None:intergenic 35.0%
AATTACTGAACAGTGTGAAG+GGG - chr7.1:2567680-2567699 None:intergenic 35.0%
ACACTCCTCGACTTATAAAT+CGG - chr7.1:2568109-2568128 None:intergenic 35.0%
ACAGAATAGCATGAAAAGGA+AGG - chr7.1:2567801-2567820 None:intergenic 35.0%
AGTTCTATATTTGTCTCTGC+TGG + chr7.1:2567272-2567291 MS.gene78332:CDS 35.0%
ATATGCAGGACTTGCATAAA+TGG + chr7.1:2567997-2568016 MS.gene78332:intron 35.0%
ATTATACAGATCTCTGCATC+AGG + chr7.1:2567844-2567863 MS.gene78332:intron 35.0%
GAAATTACTGAACAGTGTGA+AGG - chr7.1:2567682-2567701 None:intergenic 35.0%
GAGAATATGAAGAAAGTTCC+TGG - chr7.1:2568723-2568742 None:intergenic 35.0%
GATATTTCCCATCAATGTGA+AGG + chr7.1:2568463-2568482 MS.gene78332:intron 35.0%
GGAAAATTCTTATCCATCAC+AGG + chr7.1:2567513-2567532 MS.gene78332:intron 35.0%
TATCAACATTCTTTCCCCTA+AGG - chr7.1:2566901-2566920 None:intergenic 35.0%
TATGCATGCAATTCTGTTAC+AGG - chr7.1:2568882-2568901 None:intergenic 35.0%
TCACATTGATGGGAAATATC+TGG - chr7.1:2568463-2568482 None:intergenic 35.0%
TGCCAAATTCATCTCTTTGT+TGG - chr7.1:2568853-2568872 None:intergenic 35.0%
TGCTATTGTTCCAATACTTC+TGG - chr7.1:2567544-2567563 None:intergenic 35.0%
TTCATATTCTCTAGCATCTG+TGG + chr7.1:2568732-2568751 MS.gene78332:CDS 35.0%
TTGCTACAAATAGAATGGTG+AGG - chr7.1:2568758-2568777 None:intergenic 35.0%
TTGTTGGATACTGTCTGATA+TGG - chr7.1:2568837-2568856 None:intergenic 35.0%
TTTATGCAAGTCCTGCATAT+TGG - chr7.1:2567997-2568016 None:intergenic 35.0%
! AATAGCAATGGTTGTTGTTC+AGG + chr7.1:2567557-2567576 MS.gene78332:CDS 35.0%
! ATCTCTGTCATTCTTTTTGC+AGG + chr7.1:2567891-2567910 MS.gene78332:CDS 35.0%
! CAAAACCGATTTATAAGTCG+AGG + chr7.1:2568101-2568120 MS.gene78332:intron 35.0%
! GCTTTGTTACATTTGTTCAC+TGG + chr7.1:2568498-2568517 MS.gene78332:CDS 35.0%
!! TCATTAGAGTGTTGACTTGT+GGG + chr7.1:2566966-2566985 MS.gene78332:intron 35.0%
!! TTCATTAGAGTGTTGACTTG+TGG + chr7.1:2566965-2566984 MS.gene78332:intron 35.0%
!!! AGCTTTGGGAGTAATTTTGA+TGG + chr7.1:2567724-2567743 MS.gene78332:CDS 35.0%
!!! CTTTTAACTTCCTCATGAGT+TGG + chr7.1:2568546-2568565 MS.gene78332:CDS 35.0%
!!! TTTTAACTTTACCACCATCG+CGG - chr7.1:2568252-2568271 None:intergenic 35.0%
AAAACTAGTACCAGAGACCA+AGG + chr7.1:2568776-2568795 MS.gene78332:CDS 40.0%
AAACTAGTACCAGAGACCAA+GGG + chr7.1:2568777-2568796 MS.gene78332:CDS 40.0%
AATCCACTTTACAGCACCTT+AGG + chr7.1:2566882-2566901 MS.gene78332:CDS 40.0%
ACCTCAGACATTATAACCCA+GGG - chr7.1:2568362-2568381 None:intergenic 40.0%
AGGTAATATGCTCCTTCACT+GGG + chr7.1:2568378-2568397 MS.gene78332:intron 40.0%
ATAGATCCCAATGACAGCTT+TGG + chr7.1:2567709-2567728 MS.gene78332:intron 40.0%
ATCCACTTTACAGCACCTTA+GGG + chr7.1:2566883-2566902 MS.gene78332:CDS 40.0%
ATTACTCCCAAAGCTGTCAT+TGG - chr7.1:2567719-2567738 None:intergenic 40.0%
GCTAGGTTGTTCTTCACAAT+AGG + chr7.1:2567943-2567962 MS.gene78332:intron 40.0%
TAAGATGATCTGCTCTTGCT+AGG + chr7.1:2567926-2567945 MS.gene78332:intron 40.0%
TACCTCAGACATTATAACCC+AGG - chr7.1:2568363-2568382 None:intergenic 40.0%
TAGATCCCAATGACAGCTTT+GGG + chr7.1:2567710-2567729 MS.gene78332:intron 40.0%
TAGGGTATGCTTCTTAAGTG+TGG + chr7.1:2568665-2568684 MS.gene78332:intron 40.0%
TATACCGGATCTTTCTCACT+TGG + chr7.1:2568323-2568342 MS.gene78332:CDS 40.0%
TCACATTGTTAGGTAGGAGT+TGG + chr7.1:2567197-2567216 MS.gene78332:intron 40.0%
TTACTCCCAAAGCTGTCATT+GGG - chr7.1:2567718-2567737 None:intergenic 40.0%
TTGGTTTAAGAATACCGCGA+TGG + chr7.1:2568235-2568254 MS.gene78332:intron 40.0%
! GCGATGGTGGTAAAGTTAAA+AGG + chr7.1:2568251-2568270 MS.gene78332:intron 40.0%
! TTGTGGGTTATCATCTAGCT+AGG + chr7.1:2566982-2567001 MS.gene78332:intron 40.0%
! TTGTTCACTGGTTGTGTTCT+TGG + chr7.1:2568510-2568529 MS.gene78332:CDS 40.0%
!! ACAGGGTTTTCCAGAAGTAT+TGG + chr7.1:2567531-2567550 MS.gene78332:intron 40.0%
AACACCAGACATGTCACTGA+TGG - chr7.1:2567414-2567433 None:intergenic 45.0%
AACTAGTACCAGAGACCAAG+GGG + chr7.1:2568778-2568797 MS.gene78332:CDS 45.0%
ACCCTGGGTTATAATGTCTG+AGG + chr7.1:2568358-2568377 MS.gene78332:CDS 45.0%
AGCAGAACCCTTCACATTGA+TGG - chr7.1:2568474-2568493 None:intergenic 45.0%
ATCAATGTGAAGGGTTCTGC+TGG + chr7.1:2568473-2568492 MS.gene78332:CDS 45.0%
ATCAGTGACATGTCTGGTGT+TGG + chr7.1:2567413-2567432 MS.gene78332:intron 45.0%
CAACAGTTTGGCGGAGTTAA+CGG + chr7.1:2567233-2567252 MS.gene78332:CDS 45.0%
CATGCCAAGTGAGAAAGATC+CGG - chr7.1:2568330-2568349 None:intergenic 45.0%
CTGCTGAATTCCAACTCATG+AGG - chr7.1:2568559-2568578 None:intergenic 45.0%
GAAGGAATTCAGTCCCATTC+TGG + chr7.1:2568019-2568038 MS.gene78332:CDS 45.0%
GAGGTAATATGCTCCTTCAC+TGG + chr7.1:2568377-2568396 MS.gene78332:intron 45.0%
GCAGAACCCTTCACATTGAT+GGG - chr7.1:2568473-2568492 None:intergenic 45.0%
GCAGGACTTGCATAAATGGA+AGG + chr7.1:2568001-2568020 MS.gene78332:intron 45.0%
GGATCTTTCTCACTTGGCAT+GGG + chr7.1:2568329-2568348 MS.gene78332:CDS 45.0%
GTTTAAGAATACCGCGATGG+TGG + chr7.1:2568238-2568257 MS.gene78332:intron 45.0%
TCCACTTTACAGCACCTTAG+GGG + chr7.1:2566884-2566903 MS.gene78332:CDS 45.0%
TCTGCATCAGGAACATGCTT+AGG + chr7.1:2567856-2567875 MS.gene78332:CDS 45.0%
TTGACCATCAGTGACATGTC+TGG + chr7.1:2567407-2567426 MS.gene78332:intron 45.0%
! ACTTCTGGAAAACCCTGTGA+TGG - chr7.1:2567529-2567548 None:intergenic 45.0%
! CTCATGAGTTGGAATTCAGC+AGG + chr7.1:2568557-2568576 MS.gene78332:CDS 45.0%
! TGAGTTGGAATTCAGCAGGT+AGG + chr7.1:2568561-2568580 MS.gene78332:intron 45.0%
CGGATCTTTCTCACTTGGCA+TGG + chr7.1:2568328-2568347 MS.gene78332:CDS 50.0%
TCTTTCTCACTTGGCATGGG+AGG + chr7.1:2568332-2568351 MS.gene78332:CDS 50.0%
! AGCTTCTGTTTGCTGCTGAG+AGG - chr7.1:2567067-2567086 None:intergenic 50.0%
! CAAAGGTTGGTCGCTTGGAA+AGG + chr7.1:2566855-2566874 MS.gene78332:CDS 50.0%
! TGGAAGACGACCCCTTTTAC+TGG + chr7.1:2567754-2567773 MS.gene78332:CDS 50.0%
!! TCCCCTAAGGTGCTGTAAAG+TGG - chr7.1:2566888-2566907 None:intergenic 50.0%
ACACCGACGAGTGCCAGAAT+GGG - chr7.1:2568035-2568054 None:intergenic 55.0%
AGTCCCATTCTGGCACTCGT+CGG + chr7.1:2568029-2568048 MS.gene78332:CDS 55.0%
TACACCGACGAGTGCCAGAA+TGG - chr7.1:2568036-2568055 None:intergenic 55.0%
TGGCATGGGAGGAATACCCT+GGG + chr7.1:2568343-2568362 MS.gene78332:CDS 55.0%
TTCTTCTAGCGTACGCCCCT+TGG - chr7.1:2568796-2568815 None:intergenic 55.0%
TTGGCATGGGAGGAATACCC+TGG + chr7.1:2568342-2568361 MS.gene78332:CDS 55.0%
TCTGGCACTCGTCGGTGTAC+TGG + chr7.1:2568037-2568056 MS.gene78332:CDS 60.0%
AGCGTACGCCCCTTGGTCTC+TGG - chr7.1:2568789-2568808 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 2566854 2568902 2566854 ID=MS.gene78332
chr7.1 mRNA 2566854 2568902 2566854 ID=MS.gene78332.t1;Parent=MS.gene78332
chr7.1 exon 2566854 2566946 2566854 ID=MS.gene78332.t1.exon1;Parent=MS.gene78332.t1
chr7.1 CDS 2566854 2566946 2566854 ID=cds.MS.gene78332.t1;Parent=MS.gene78332.t1
chr7.1 exon 2567051 2567131 2567051 ID=MS.gene78332.t1.exon2;Parent=MS.gene78332.t1
chr7.1 CDS 2567051 2567131 2567051 ID=cds.MS.gene78332.t1;Parent=MS.gene78332.t1
chr7.1 exon 2567209 2567293 2567209 ID=MS.gene78332.t1.exon3;Parent=MS.gene78332.t1
chr7.1 CDS 2567209 2567293 2567209 ID=cds.MS.gene78332.t1;Parent=MS.gene78332.t1
chr7.1 exon 2567535 2567578 2567535 ID=MS.gene78332.t1.exon4;Parent=MS.gene78332.t1
chr7.1 CDS 2567535 2567578 2567535 ID=cds.MS.gene78332.t1;Parent=MS.gene78332.t1
chr7.1 exon 2567713 2567775 2567713 ID=MS.gene78332.t1.exon5;Parent=MS.gene78332.t1
chr7.1 CDS 2567713 2567775 2567713 ID=cds.MS.gene78332.t1;Parent=MS.gene78332.t1
chr7.1 exon 2567853 2567912 2567853 ID=MS.gene78332.t1.exon6;Parent=MS.gene78332.t1
chr7.1 CDS 2567853 2567912 2567853 ID=cds.MS.gene78332.t1;Parent=MS.gene78332.t1
chr7.1 exon 2568005 2568058 2568005 ID=MS.gene78332.t1.exon7;Parent=MS.gene78332.t1
chr7.1 CDS 2568005 2568058 2568005 ID=cds.MS.gene78332.t1;Parent=MS.gene78332.t1
chr7.1 exon 2568320 2568379 2568320 ID=MS.gene78332.t1.exon8;Parent=MS.gene78332.t1
chr7.1 CDS 2568320 2568379 2568320 ID=cds.MS.gene78332.t1;Parent=MS.gene78332.t1
chr7.1 exon 2568464 2568578 2568464 ID=MS.gene78332.t1.exon9;Parent=MS.gene78332.t1
chr7.1 CDS 2568464 2568578 2568464 ID=cds.MS.gene78332.t1;Parent=MS.gene78332.t1
chr7.1 exon 2568724 2568902 2568724 ID=MS.gene78332.t1.exon10;Parent=MS.gene78332.t1
chr7.1 CDS 2568724 2568902 2568724 ID=cds.MS.gene78332.t1;Parent=MS.gene78332.t1
Gene Sequence

>MS.gene78332

GCAAAGGTTGGTCGCTTGGAAAGGAGTGAATCCACTTTACAGCACCTTAGGGGAAAGAATGTTGATATTTCTGAAGAGGCCACTGAAATTAGAGTATGTAATAAGAGTTTGTTCATTAGAGTGTTGACTTGTGGGTTATCATCTAGCTAGGAAGAACCTAAAAGTGTAACATATTTTTATACACTTACTTTTTGTAGGAATTTACAGAAGCCTCTCAGCAGCAAACAGAAGCTAACATTTTTGGGTTATTTCAATTGCAGTATTTGAAGTCACTTACTGTGAGATTTCTAATCCCAATTCATGCATCTTATCTTAAAAATATGCAGATTCTTATGGTATTTAGTCACATTGTTAGGTAGGAGTTGGCCTGATAATACTACAACAGTTTGGCGGAGTTAACGGCATTGCTTTTTATGCAAGTTCTATATTTGTCTCTGCTGGTATGTGTACGTTTTATTTATGCTTCTATCATATTTAAAACTTCACATAGAAAACGTGTCAAATGTCGAATACCAGCAGAATTAATAATTCTATTTTCTCAAATTATTACTGGTTGACCATCAGTGACATGTCTGGTGTTGGTGCTTCATAGCATATGACATGTAAAGAAGGTGATTACAATAACTAACATTATATTTATTACATGATTCTCATGAAAGGGAAAATTCTTATCCATCACAGGGTTTTCCAGAAGTATTGGAACAATAGCAATGGTTGTTGTTCAGGTTCTTAGTTCTCTTCATATAATTTGTTTATTTTTGTCCTCTTAATATGATGAATAAGATGAGATAGGTGTCAATTTTGATGAGTCTTCATTACTGAGCCCCTTCACACTGTTCAGTAATTTCTGTCTTCATAGATCCCAATGACAGCTTTGGGAGTAATTTTGATGGATAAATCTGGAAGACGACCCCTTTTACTGGTAAAACGATTAAACTTTTGTGCCTTCCTTTTCATGCTATTCTGTAAATTCTAAATCTAAAATTTTACATTATACAGATCTCTGCATCAGGAACATGCTTAGGATGCTTCCTTGTATCTCTGTCATTCTTTTTGCAGGTTCTCTGAATAATAAGATGATCTGCTCTTGCTAGGTTGTTCTTCACAATAGGTATTTCTAAATCAACAGATTGTTTTCTTCCAATATGCAGGACTTGCATAAATGGAAGGAATTCAGTCCCATTCTGGCACTCGTCGGTGTACTGGTATTGATTTTGTCTGATTATGTTGCTTCTAACTCATTCCTACAAAACCGATTTATAAGTCGAGGAGTGTCATTATTTTATAAACTTTCTCTATTTTAAATGTGGAACTTGAGTTTTTCCTACTAATACTTTCTCTGATTTTTCACCAACCTTATATTTGCATTCATGAAATAGACTTGGTTTAAGAATACCGCGATGGTGGTAAAGTTAAAAGGTATATGGTAATATACATTTTCACCATTTAGTTACCATAATAATCAGGTATATACCGGATCTTTCTCACTTGGCATGGGAGGAATACCCTGGGTTATAATGTCTGAGGTAATATGCTCCTTCACTGGGTATGCAAATTTTGATCGCAAGTTCATAACAAGTCCTCATCTTGATAATCATTTTTTTTACCAGATATTTCCCATCAATGTGAAGGGTTCTGCTGGAAGCTTTGTTACATTTGTTCACTGGTTGTGTTCTTGGATTGTATCATATGCTTTTAACTTCCTCATGAGTTGGAATTCAGCAGGTAGGTTTTCATTTACTTTTGATCCCTCTAGAAGAAAACAAAAAATCAGAAAGGACAAACACAAAAATGAATGAAGTCTTGAAAAGTAGGGTATGCTTCTTAAGTGTGGAATAAGTTCATTAATTAATGTATTATTTTTTACCAGGAACTTTCTTCATATTCTCTAGCATCTGTGGCCTCACCATTCTATTTGTAGCAAAACTAGTACCAGAGACCAAGGGGCGTACGCTAGAAGAAGTTCAAGCGTCTCTCAATCCATATCAGACAGTATCCAACAAAGAGATGAATTTGGCATATGATCCTGTAACAGAATTGCATGCATAA
Protein sequence

>MS.gene78332.t1

AKVGRLERSESTLQHLRGKNVDISEEATEIREFTEASQQQTEANIFGLFQLQYLKSLTVGVGLIILQQFGGVNGIAFYASSIFVSAGFSRSIGTIAMVVVQIPMTALGVILMDKSGRRPLLLISASGTCLGCFLVSLSFFLQDLHKWKEFSPILALVGVLVYTGSFSLGMGGIPWVIMSEIFPINVKGSAGSFVTFVHWLCSWIVSYAFNFLMSWNSAGTFFIFSSICGLTILFVAKLVPETKGRTLEEVQASLNPYQTVSNKEMNLAYDPVTELHA