Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058529.t1 | XP_024629522.1 | 96.7 | 755 | 24 | 1 | 1 | 755 | 1 | 754 | 0.00E+00 | 1495.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058529.t1 | Q9LMT2 | 60.1 | 751 | 242 | 10 | 15 | 753 | 9 | 713 | 1.3e-246 | 854.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058529.t1 | G7LCF5 | 96.7 | 755 | 24 | 1 | 1 | 755 | 1 | 754 | 0.0e+00 | 1495.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058529 | MS.gene063536 | 0.819982 | 8.72E-53 | -1.69E-46 |
| MS.gene058529 | MS.gene066531 | 0.80335 | 3.64E-49 | -1.69E-46 |
| MS.gene058529 | MS.gene071623 | 0.822716 | 2.04E-53 | -1.69E-46 |
| MS.gene058529 | MS.gene071624 | 0.805085 | 1.58E-49 | -1.69E-46 |
| MS.gene058529 | MS.gene36309 | 0.808637 | 2.81E-50 | -1.69E-46 |
| MS.gene058529 | MS.gene47820 | 0.804999 | 1.65E-49 | -1.69E-46 |
| MS.gene058529 | MS.gene47821 | 0.806848 | 6.74E-50 | -1.69E-46 |
| MS.gene058529 | MS.gene47843 | 0.805996 | 1.02E-49 | -1.69E-46 |
| MS.gene058529 | MS.gene61653 | 0.80098 | 1.12E-48 | -1.69E-46 |
| MS.gene058529 | MS.gene66371 | 0.804081 | 2.56E-49 | -1.69E-46 |
| MS.gene058529 | MS.gene68981 | 0.807521 | 4.85E-50 | -1.69E-46 |
| MS.gene058529 | MS.gene75039 | 0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene058529 | MS.gene76490 | 0.804643 | 1.96E-49 | -1.69E-46 |
| MS.gene058529 | MS.gene78329 | 0.823331 | 1.47E-53 | -1.69E-46 |
| MS.gene058529 | MS.gene78332 | 0.810458 | 1.14E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058529.t1 | MTR_8g106560 | 96.689 | 755 | 24 | 1 | 1 | 755 | 1 | 754 | 0.0 | 1522 |
| MS.gene058529.t1 | MTR_6g082000 | 72.823 | 758 | 197 | 5 | 1 | 755 | 1 | 752 | 0.0 | 1136 |
| MS.gene058529.t1 | MTR_3g110375 | 64.386 | 497 | 175 | 2 | 13 | 507 | 20 | 516 | 0.0 | 709 |
| MS.gene058529.t1 | MTR_3g110375 | 64.386 | 497 | 175 | 2 | 13 | 507 | 20 | 516 | 0.0 | 709 |
| MS.gene058529.t1 | MTR_3g110375 | 64.386 | 497 | 175 | 2 | 13 | 507 | 20 | 516 | 0.0 | 707 |
| MS.gene058529.t1 | MTR_0283s0030 | 95.989 | 349 | 14 | 0 | 1 | 349 | 1 | 349 | 0.0 | 706 |
| MS.gene058529.t1 | MTR_3g110375 | 60.765 | 497 | 172 | 3 | 13 | 507 | 20 | 495 | 0.0 | 657 |
| MS.gene058529.t1 | MTR_8g014560 | 63.067 | 463 | 162 | 3 | 86 | 546 | 1 | 456 | 0.0 | 634 |
| MS.gene058529.t1 | MTR_8g014560 | 63.067 | 463 | 162 | 3 | 86 | 546 | 1 | 456 | 0.0 | 634 |
| MS.gene058529.t1 | MTR_8g014560 | 63.067 | 463 | 162 | 3 | 86 | 546 | 1 | 456 | 0.0 | 633 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058529.t1 | AT1G17980 | 61.192 | 755 | 227 | 13 | 15 | 753 | 9 | 713 | 0.0 | 885 |
| MS.gene058529.t1 | AT4G32850 | 66.736 | 478 | 158 | 1 | 18 | 494 | 22 | 499 | 0.0 | 706 |
| MS.gene058529.t1 | AT4G32850 | 66.736 | 478 | 158 | 1 | 18 | 494 | 22 | 499 | 0.0 | 706 |
| MS.gene058529.t1 | AT4G32850 | 66.736 | 478 | 158 | 1 | 18 | 494 | 22 | 499 | 0.0 | 706 |
| MS.gene058529.t1 | AT4G32850 | 66.736 | 478 | 158 | 1 | 18 | 494 | 22 | 499 | 0.0 | 706 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 706 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 706 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 705 |
| MS.gene058529.t1 | AT4G32850 | 66.736 | 478 | 158 | 1 | 18 | 494 | 22 | 499 | 0.0 | 705 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 704 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 704 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 704 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 704 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 704 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 704 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 704 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 704 |
| MS.gene058529.t1 | AT4G32850 | 66.320 | 481 | 161 | 1 | 15 | 494 | 19 | 499 | 0.0 | 704 |
| MS.gene058529.t1 | AT2G25850 | 60.935 | 535 | 193 | 4 | 18 | 550 | 24 | 544 | 0.0 | 696 |
| MS.gene058529.t1 | AT2G25850 | 60.935 | 535 | 193 | 4 | 18 | 550 | 24 | 544 | 0.0 | 695 |
| MS.gene058529.t1 | AT2G25850 | 60.935 | 535 | 193 | 4 | 18 | 550 | 24 | 544 | 0.0 | 694 |
| MS.gene058529.t1 | AT2G25850 | 60.935 | 535 | 193 | 4 | 18 | 550 | 24 | 544 | 0.0 | 694 |
| MS.gene058529.t1 | AT2G25850 | 60.935 | 535 | 193 | 4 | 18 | 550 | 24 | 544 | 0.0 | 694 |
| MS.gene058529.t1 | AT2G25850 | 60.935 | 535 | 193 | 4 | 18 | 550 | 24 | 544 | 0.0 | 694 |
| MS.gene058529.t1 | AT2G25850 | 60.935 | 535 | 193 | 4 | 18 | 550 | 24 | 544 | 0.0 | 694 |
| MS.gene058529.t1 | AT2G25850 | 60.935 | 535 | 193 | 4 | 18 | 550 | 24 | 544 | 0.0 | 694 |
| MS.gene058529.t1 | AT2G25850 | 60.935 | 535 | 193 | 4 | 18 | 550 | 24 | 544 | 0.0 | 694 |
| MS.gene058529.t1 | AT1G17980 | 58.425 | 635 | 200 | 12 | 134 | 753 | 1 | 586 | 0.0 | 689 |
| MS.gene058529.t1 | AT3G06560 | 38.653 | 401 | 231 | 5 | 39 | 438 | 21 | 407 | 1.22e-84 | 278 |
Find 187 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAATTATCACACCTTTC+TGG | 0.144956 | 4.1:-954190 | None:intergenic |
| TCTTTGTCTACCTGAATATT+TGG | 0.161580 | 4.1:-954698 | None:intergenic |
| CAAACTGTTCGCAGTCTTAA+TGG | 0.187355 | 4.1:+954641 | MS.gene058529:CDS |
| CAGTAATGCTTTGTGCTATT+AGG | 0.199866 | 4.1:+955121 | MS.gene058529:CDS |
| AGAAATAAAGTCAAAGATTT+TGG | 0.214683 | 4.1:+957282 | MS.gene058529:CDS |
| CGTTCAGAGCTTAGGGTTTC+CGG | 0.219101 | 4.1:+956802 | MS.gene058529:CDS |
| TGTTGGTGTCTCGATTCTTT+AGG | 0.240500 | 4.1:+955070 | MS.gene058529:CDS |
| TGAGTTAGATTGTGAAGATT+TGG | 0.249542 | 4.1:+953716 | MS.gene058529:intron |
| GATCTCTTGGACTTCAAGTT+TGG | 0.256862 | 4.1:+955148 | MS.gene058529:CDS |
| ATACCCTCCTTTGTATTTCC+TGG | 0.260182 | 4.1:+956730 | MS.gene058529:CDS |
| GGGTTAAGCAACCGCGATTT+CGG | 0.275931 | 4.1:+953098 | MS.gene058529:CDS |
| TTATCCTTGGGATTTCTTCT+AGG | 0.277232 | 4.1:-955174 | None:intergenic |
| CTAATAGCACAAAGCATTAC+TGG | 0.280032 | 4.1:-955120 | None:intergenic |
| CAGGTTGAATTTCACCTCCT+TGG | 0.283830 | 4.1:+958625 | MS.gene058529:intron |
| TTTACACTGTTCTTACTTCA+TGG | 0.285582 | 4.1:+956558 | MS.gene058529:CDS |
| TTGTATTTCCTGGTGGTATT+CGG | 0.285920 | 4.1:+956740 | MS.gene058529:CDS |
| CAAGTTCAATGGCATCTCTT+TGG | 0.287754 | 4.1:+954388 | MS.gene058529:CDS |
| ATCAAATTGTCCGCCTTCTT+TGG | 0.290734 | 4.1:-956608 | None:intergenic |
| GTTGGTGTCTCGATTCTTTA+GGG | 0.291373 | 4.1:+955071 | MS.gene058529:CDS |
| AGTAATGCTTTGTGCTATTA+GGG | 0.297888 | 4.1:+955122 | MS.gene058529:CDS |
| GCTCGGTTATCCCTAACTTT+TGG | 0.297925 | 4.1:-953127 | None:intergenic |
| TCAACTCATATATACTCTAA+TGG | 0.298407 | 4.1:+957390 | MS.gene058529:CDS |
| GGTTAAGCAACCGCGATTTC+GGG | 0.298710 | 4.1:+953099 | MS.gene058529:CDS |
| CATTGAGATGCGTGAAGTTA+TGG | 0.304250 | 4.1:+954810 | MS.gene058529:CDS |
| GAACTTGGCAAACATCAATT+TGG | 0.304572 | 4.1:+957308 | MS.gene058529:CDS |
| GCATTTGGTTCCAAATATTC+AGG | 0.305575 | 4.1:+954688 | MS.gene058529:CDS |
| TCAAGCTCATCAGGTTCTTC+AGG | 0.305920 | 4.1:-957243 | None:intergenic |
| AGGTTGAATTTCACCTCCTT+GGG | 0.315222 | 4.1:+958626 | MS.gene058529:intron |
| GACTGATCAAATCTTGCATT+TGG | 0.327355 | 4.1:+954673 | MS.gene058529:CDS |
| TGGCTTTAGGAAGATTTCTT+TGG | 0.334957 | 4.1:+954281 | MS.gene058529:intron |
| GAGTTAGATTGTGAAGATTT+GGG | 0.341588 | 4.1:+953717 | MS.gene058529:intron |
| GGGTGCAACTCTGTCACTTC+TGG | 0.341852 | 4.1:-954332 | None:intergenic |
| AATCGAGACACCAACATATT+AGG | 0.341938 | 4.1:-955063 | None:intergenic |
| CAACTCATATATACTCTAAT+GGG | 0.349594 | 4.1:+957391 | MS.gene058529:CDS |
| ATCTCTTGGACTTCAAGTTT+GGG | 0.350438 | 4.1:+955149 | MS.gene058529:CDS |
| CTCACCCAGGTTACTTTGGA+TGG | 0.351923 | 4.1:-956772 | None:intergenic |
| TTCGGGCAGCGCCAAAAGTT+AGG | 0.352461 | 4.1:+953116 | MS.gene058529:CDS |
| ATATGTCACGGGCAGGTTGC+AGG | 0.353400 | 4.1:+954973 | MS.gene058529:intron |
| TTTATGCACAATTATCTTTG+TGG | 0.356533 | 4.1:+954417 | MS.gene058529:CDS |
| TTCCGCTGTGGCACTGGTGC+TGG | 0.359270 | 4.1:-958447 | None:intergenic |
| GTTACTTTGGATGGGCATTT+AGG | 0.364483 | 4.1:-956763 | None:intergenic |
| AGATAAGCAGGAGTAATTAT+TGG | 0.366019 | 4.1:-955210 | None:intergenic |
| CCTCTCTGCCTCCCTCTAGC+AGG | 0.372633 | 4.1:+956938 | MS.gene058529:CDS |
| CGCCGGCTTGTATGAGAATC+AGG | 0.373338 | 4.1:+953319 | MS.gene058529:CDS |
| GCACAAAGCATTACTGGGTT+TGG | 0.381859 | 4.1:-955114 | None:intergenic |
| CATTAGATGGTATTTATCCT+TGG | 0.381933 | 4.1:-955187 | None:intergenic |
| AACATATTAGGCAGTGCATT+TGG | 0.383440 | 4.1:-955051 | None:intergenic |
| ATTAGATGGTATTTATCCTT+GGG | 0.393020 | 4.1:-955186 | None:intergenic |
| TTTCAGGGGAGTGTCCTTCT+GGG | 0.394299 | 4.1:+957076 | MS.gene058529:CDS |
| AATTGTCCGCCTTCTTTGGC+AGG | 0.398728 | 4.1:-956604 | None:intergenic |
| TGGAGGCTAACAAGGCTGAT+TGG | 0.401722 | 4.1:+956163 | MS.gene058529:CDS |
| AGATCATCTTCAAGCTCATC+AGG | 0.401791 | 4.1:-957252 | None:intergenic |
| ATCTTAGAAACTGGAAAGGC+TGG | 0.402109 | 4.1:+956268 | MS.gene058529:CDS |
| GGAGGCTAACAAGGCTGATT+GGG | 0.408887 | 4.1:+956164 | MS.gene058529:CDS |
| AGTTGGGAGCAAACAATGAT+AGG | 0.410690 | 4.1:+956860 | MS.gene058529:CDS |
| GAGATGGATATATTCATTCC+AGG | 0.411288 | 4.1:-956688 | None:intergenic |
| TTATGCACAATTATCTTTGT+GGG | 0.411391 | 4.1:+954418 | MS.gene058529:CDS |
| ATTGAGATGCGTGAAGTTAT+GGG | 0.413969 | 4.1:+954811 | MS.gene058529:CDS |
| GAGTAATTATTGGCATTAGA+TGG | 0.414055 | 4.1:-955200 | None:intergenic |
| GTAAGCGACGTTCAGAGCTT+AGG | 0.418314 | 4.1:+956794 | MS.gene058529:CDS |
| CTTGCGCCAGTTGACATTGA+AGG | 0.420649 | 4.1:+956302 | MS.gene058529:CDS |
| ATTATGGTTTACCTAATAAG+AGG | 0.426995 | 4.1:-958471 | None:intergenic |
| CTTACTCACCCAGGTTACTT+TGG | 0.427213 | 4.1:-956776 | None:intergenic |
| TAAGCGACGTTCAGAGCTTA+GGG | 0.433261 | 4.1:+956795 | MS.gene058529:CDS |
| ATGTTGATGATCTTAGAAAC+TGG | 0.435019 | 4.1:+956259 | MS.gene058529:CDS |
| TAGATTGAGAGGAACACTTA+TGG | 0.435165 | 4.1:+956484 | MS.gene058529:intron |
| ACAAAGATAATTGTGCATAA+AGG | 0.440809 | 4.1:-954415 | None:intergenic |
| AGAGGGAGGCAGAGAGGAAA+AGG | 0.442744 | 4.1:-956932 | None:intergenic |
| ATGGACCACACACAATCTTC+TGG | 0.443788 | 4.1:-957200 | None:intergenic |
| ACCTTTCTGGTTGCATGTCT+AGG | 0.447295 | 4.1:-954177 | None:intergenic |
| AATTTGTTGATGGGGAGCAC+TGG | 0.449994 | 4.1:+953077 | None:intergenic |
| CACAGCGGAAGCCTCTTATT+AGG | 0.452711 | 4.1:+958460 | MS.gene058529:CDS |
| TATATACCTTCAATGTCAAC+TGG | 0.454373 | 4.1:-956308 | None:intergenic |
| AGCAGGGATGTTCATGAAGA+TGG | 0.454788 | 4.1:+956955 | MS.gene058529:CDS |
| TTACACTGTTCTTACTTCAT+GGG | 0.455282 | 4.1:+956559 | MS.gene058529:CDS |
| GAGCTTAGGGTTTCCGGCCA+TGG | 0.456723 | 4.1:+956808 | MS.gene058529:CDS |
| AATGGAGCTGTAAGCTCAGC+AGG | 0.457568 | 4.1:-958411 | None:intergenic |
| GCTATTAGGGAAGGATCTCT+TGG | 0.461527 | 4.1:+955135 | MS.gene058529:CDS |
| GTAGGGAGGAAGTGCTTGGC+AGG | 0.466400 | 4.1:+953354 | MS.gene058529:CDS |
| ATCAGGACGAAGCGATTTGT+AGG | 0.468725 | 4.1:+953336 | MS.gene058529:CDS |
| GAGGCAGAGAGGAAAAGGAC+CGG | 0.474857 | 4.1:-956927 | None:intergenic |
| CTTCTCGAGCTCACGCGTCT+TGG | 0.475119 | 4.1:-953186 | None:intergenic |
| AAATCCCTTTGCACGGCTAA+CGG | 0.475309 | 4.1:-953746 | None:intergenic |
| ATCACTGGAACATGAGCATC+AGG | 0.477906 | 4.1:-954359 | None:intergenic |
| GTCTCAAGAGGGTAAAGAGT+TGG | 0.478740 | 4.1:+956843 | MS.gene058529:CDS |
| AAGAACGTCAATATCTGCTC+CGG | 0.479690 | 4.1:-954145 | None:intergenic |
| GTGATGGGTTTCAAGTTCAA+TGG | 0.481598 | 4.1:+954377 | MS.gene058529:CDS |
| TCGGGCAGCGCCAAAAGTTA+GGG | 0.482509 | 4.1:+953117 | MS.gene058529:CDS |
| TCTCAAGAGGGTAAAGAGTT+GGG | 0.485029 | 4.1:+956844 | MS.gene058529:CDS |
| AGAGGCTTCCGCTGTGGCAC+TGG | 0.486863 | 4.1:-958453 | None:intergenic |
| GCGTACACGCAATGGAAACC+TGG | 0.488459 | 4.1:+956670 | MS.gene058529:CDS |
| AAAGGGATTTAACGAACAAC+TGG | 0.491052 | 4.1:+953759 | MS.gene058529:CDS |
| CTCTCTGCCTCCCTCTAGCA+GGG | 0.491602 | 4.1:+956939 | MS.gene058529:CDS |
| GAATTCATGCACAGATAAGC+AGG | 0.491662 | 4.1:-955222 | None:intergenic |
| ATAAACTGGGCATTGCTTGT+TGG | 0.493016 | 4.1:+955009 | MS.gene058529:CDS |
| AAAGCAAGCAGAAGATAGTC+GGG | 0.493024 | 4.1:+956888 | MS.gene058529:CDS |
| GAAAGCAAGCAGAAGATAGT+CGG | 0.498683 | 4.1:+956887 | MS.gene058529:CDS |
| TCTTTAGGGTATACACTCAA+TGG | 0.504290 | 4.1:+955085 | MS.gene058529:CDS |
| CTCATCAGGTTCTTCAGGAA+AGG | 0.505716 | 4.1:-957238 | None:intergenic |
| GATGCTCATGTTCCAGTGAT+GGG | 0.507414 | 4.1:+954362 | MS.gene058529:CDS |
| TTGAACTTGAAACCCATCAC+TGG | 0.510031 | 4.1:-954374 | None:intergenic |
| GGAACATGAGCATCAGGCAC+TGG | 0.510601 | 4.1:-954353 | None:intergenic |
| AGAACGTCAATATCTGCTCC+GGG | 0.514026 | 4.1:-954144 | None:intergenic |
| TGATGCTCATGTTCCAGTGA+TGG | 0.514204 | 4.1:+954361 | MS.gene058529:CDS |
| ATTTGTTGATGGGGAGCACT+GGG | 0.519969 | 4.1:+953078 | None:intergenic |
| GCGGCGTTTCACATGGGAGA+TGG | 0.520378 | 4.1:-956704 | None:intergenic |
| AATCTTATAAGAATTATTTG+CGG | 0.524889 | 4.1:+956217 | MS.gene058529:CDS |
| CAAGGAGTTCCTGCCAAAGA+AGG | 0.525214 | 4.1:+956595 | MS.gene058529:CDS |
| ATTTGTAGGGAGGAAGTGCT+TGG | 0.525485 | 4.1:+953350 | MS.gene058529:CDS |
| TTAGGCTATGGAGGCTAACA+AGG | 0.527787 | 4.1:+956155 | MS.gene058529:intron |
| CCCTCCTTTGTATTTCCTGG+TGG | 0.533197 | 4.1:+956733 | MS.gene058529:CDS |
| CTTCAGTGTCATCCACATCC+TGG | 0.537994 | 4.1:+956511 | MS.gene058529:CDS |
| AATGCCCATCCAAAGTAACC+TGG | 0.539596 | 4.1:+956767 | MS.gene058529:CDS |
| GCAGTGCATTTGGATATAGC+TGG | 0.539999 | 4.1:-955041 | None:intergenic |
| GTATATTGCGGCGTTTCACA+TGG | 0.542592 | 4.1:-956711 | None:intergenic |
| TTCAGGGGAGTGTCCTTCTG+GGG | 0.542622 | 4.1:+957077 | MS.gene058529:CDS |
| GTTGGTCCGCTCAATGAGAT+CGG | 0.547111 | 4.1:-953149 | None:intergenic |
| AAAACCGTTAGCCGTGCAAA+GGG | 0.548467 | 4.1:+953742 | MS.gene058529:CDS |
| GATATTGACGTTCTTTGTGT+GGG | 0.550757 | 4.1:+954153 | MS.gene058529:CDS |
| TCACCCAGGTTACTTTGGAT+GGG | 0.551473 | 4.1:-956771 | None:intergenic |
| CTGTCAATGCGTACACGCAA+TGG | 0.552154 | 4.1:+956662 | MS.gene058529:CDS |
| AGATATTGACGTTCTTTGTG+TGG | 0.554128 | 4.1:+954152 | MS.gene058529:CDS |
| CAAAACCGTTAGCCGTGCAA+AGG | 0.554179 | 4.1:+953741 | MS.gene058529:CDS |
| ATGCTTTGTGCTATTAGGGA+AGG | 0.556768 | 4.1:+955126 | MS.gene058529:CDS |
| ATGAAGTAAGAACAGTGTAA+AGG | 0.558232 | 4.1:-956556 | None:intergenic |
| GTTTAGTACTTGCAAGACGC+CGG | 0.565736 | 4.1:+953302 | MS.gene058529:intron |
| TAATAGCACAAAGCATTACT+GGG | 0.568662 | 4.1:-955119 | None:intergenic |
| ATAGGACTTGGATTTATCAC+AGG | 0.569485 | 4.1:+954592 | MS.gene058529:intron |
| TTTGGCGCTGCCCGAAATCG+CGG | 0.570440 | 4.1:-953109 | None:intergenic |
| TATCAGTAGCAGCAAGTAGA+GGG | 0.570624 | 4.1:-957143 | None:intergenic |
| GTTCGTTAAATCCCTTTGCA+CGG | 0.573155 | 4.1:-953753 | None:intergenic |
| GGGTATACACTCAATGGCGT+TGG | 0.578720 | 4.1:+955091 | MS.gene058529:CDS |
| AGGCAGAGAGGAAAAGGACC+GGG | 0.579422 | 4.1:-956926 | None:intergenic |
| TATGACAGAGGAATTTCAGA+GGG | 0.579932 | 4.1:+955278 | MS.gene058529:CDS |
| CTTTGAACATCTAGATTGAG+AGG | 0.582804 | 4.1:+956473 | MS.gene058529:intron |
| CTATCAGTAGCAGCAAGTAG+AGG | 0.584655 | 4.1:-957144 | None:intergenic |
| TTGGCGACATCATATTCAGT+TGG | 0.584796 | 4.1:-953167 | None:intergenic |
| AGTGCTTGGCAGGCTAGACC+AGG | 0.589329 | 4.1:+953364 | MS.gene058529:CDS |
| GAACATGAGCATCAGGCACT+GGG | 0.589802 | 4.1:-954352 | None:intergenic |
| ACCTAGACATGCAACCAGAA+AGG | 0.590035 | 4.1:+954176 | MS.gene058529:CDS |
| TCAGGACGAAGCGATTTGTA+GGG | 0.596039 | 4.1:+953337 | MS.gene058529:CDS |
| CATTTAGGCCGAATACCACC+AGG | 0.602857 | 4.1:-956748 | None:intergenic |
| ATGGGTCTGCAACGTAAGCA+AGG | 0.604283 | 4.1:+956577 | MS.gene058529:CDS |
| TCTTAGAAACTGGAAAGGCT+GGG | 0.607158 | 4.1:+956269 | MS.gene058529:CDS |
| TTCATGAACATCCCTGCTAG+AGG | 0.609618 | 4.1:-956950 | None:intergenic |
| AAATGCACTGCCTAATATGT+TGG | 0.610636 | 4.1:+955053 | MS.gene058529:CDS |
| GTCCTGATTCTCATACAAGC+CGG | 0.611765 | 4.1:-953321 | None:intergenic |
| AAGTTATGGGCTAAGCGTCG+TGG | 0.611953 | 4.1:+954824 | MS.gene058529:CDS |
| CAAGAACTAGAAATGCTGAC+AGG | 0.613646 | 4.1:-956982 | None:intergenic |
| CCACCAGGAAATACAAAGGA+GGG | 0.615860 | 4.1:-956733 | None:intergenic |
| TCATGAACATCCCTGCTAGA+GGG | 0.618224 | 4.1:-956949 | None:intergenic |
| AACTCATATATACTCTAATG+GGG | 0.619528 | 4.1:+957392 | MS.gene058529:CDS |
| ATGCCCATCCAAAGTAACCT+GGG | 0.622591 | 4.1:+956768 | MS.gene058529:CDS |
| AAGGCTTGATGTACCTCACA+TGG | 0.622782 | 4.1:-957219 | None:intergenic |
| GGTTGAATTTCACCTCCTTG+GGG | 0.623561 | 4.1:+958627 | MS.gene058529:intron |
| CTTACAGCTCCATTGTTCAG+TGG | 0.632852 | 4.1:+958420 | MS.gene058529:CDS |
| TTGGTCTCTCTATCCCCAGA+AGG | 0.633023 | 4.1:-957090 | None:intergenic |
| TCAAGCAGAAAAGTCTCAAG+AGG | 0.634015 | 4.1:+956831 | MS.gene058529:CDS |
| CCTGCTAGAGGGAGGCAGAG+AGG | 0.636042 | 4.1:-956938 | None:intergenic |
| GCTGGATTTCCACTGAACAA+TGG | 0.638532 | 4.1:-958429 | None:intergenic |
| GGAGTTCCTGCCAAAGAAGG+CGG | 0.639166 | 4.1:+956598 | MS.gene058529:CDS |
| GGACGAAGCGATTTGTAGGG+AGG | 0.639484 | 4.1:+953340 | MS.gene058529:CDS |
| TCTGGGGATAGAGAGACCAA+TGG | 0.642628 | 4.1:+957093 | MS.gene058529:CDS |
| ACCACCAGGAAATACAAAGG+AGG | 0.648062 | 4.1:-956734 | None:intergenic |
| GATGATCTTAGAAACTGGAA+AGG | 0.649709 | 4.1:+956264 | MS.gene058529:CDS |
| GGACTCTACAAAGTCTGCAG+TGG | 0.650459 | 4.1:+957329 | MS.gene058529:CDS |
| TCCGCTCAATGAGATCGGCT+CGG | 0.650558 | 4.1:-953144 | None:intergenic |
| GGATCCTAGAAGAAATCCCA+AGG | 0.650740 | 4.1:+955170 | MS.gene058529:CDS |
| GTCATCCAGAAGATTGTGTG+TGG | 0.654869 | 4.1:+957195 | MS.gene058529:CDS |
| TACATTGCGTGTTATGACAG+AGG | 0.656944 | 4.1:+955266 | MS.gene058529:CDS |
| TATATTGCGGCGTTTCACAT+GGG | 0.659358 | 4.1:-956710 | None:intergenic |
| TGAACATCCCTGCTAGAGGG+AGG | 0.659467 | 4.1:-956946 | None:intergenic |
| CAAGACGCGTGAGCTCGAGA+AGG | 0.662270 | 4.1:+953187 | MS.gene058529:CDS |
| CTAATAAGAGGCTTCCGCTG+TGG | 0.663602 | 4.1:-958459 | None:intergenic |
| GAGGGGAGATGAAATATGTG+AGG | 0.673344 | 4.1:+955296 | MS.gene058529:CDS |
| TGAACGTCGCTTACTCACCC+AGG | 0.678323 | 4.1:-956785 | None:intergenic |
| AATACCACCAGGAAATACAA+AGG | 0.679279 | 4.1:-956737 | None:intergenic |
| TTATGACAGAGGAATTTCAG+AGG | 0.679308 | 4.1:+955277 | MS.gene058529:CDS |
| GGGATGACTTGAGAAACTCC+CGG | 0.679894 | 4.1:+956908 | MS.gene058529:CDS |
| ACCGAGCCGATCTCATTGAG+CGG | 0.681660 | 4.1:+953143 | MS.gene058529:CDS |
| CAAGCAGAAAAGTCTCAAGA+GGG | 0.682829 | 4.1:+956832 | MS.gene058529:CDS |
| ATCCAGCACCAGTGCCACAG+CGG | 0.695774 | 4.1:+958445 | MS.gene058529:CDS |
| ACTCATATATACTCTAATGG+GGG | 0.698755 | 4.1:+957393 | MS.gene058529:CDS |
| ATACAAAGGAGGGTATATTG+CGG | 0.719107 | 4.1:-956723 | None:intergenic |
| GATTGTGTGTGGTCCATGTG+AGG | 0.722355 | 4.1:+957206 | MS.gene058529:CDS |
| GAACGTCAATATCTGCTCCG+GGG | 0.726104 | 4.1:-954143 | None:intergenic |
| ATGACAGAGGAATTTCAGAG+GGG | 0.736796 | 4.1:+955279 | MS.gene058529:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATAAACAAAC+AGG | + | chr4.1:955826-955845 | MS.gene058529:intron | 10.0% |
| !! | AAATAAAAATTAAGGATATA+TGG | - | chr4.1:958262-958281 | None:intergenic | 10.0% |
| !! | AAATTATAACTAAAAAAACT+AGG | - | chr4.1:957605-957624 | None:intergenic | 10.0% |
| !! | TACAAAATTTGAATTAAAAA+TGG | - | chr4.1:954114-954133 | None:intergenic | 10.0% |
| !!! | ATTTTTAATTCAAATTTTGT+AGG | + | chr4.1:954113-954132 | MS.gene058529:intron | 10.0% |
| !!! | TATTTTAATCTATAACAAAT+GGG | - | chr4.1:955544-955563 | None:intergenic | 10.0% |
| !!! | TTATTTTAATACTTTTTATG+GGG | + | chr4.1:955428-955447 | MS.gene058529:intron | 10.0% |
| !!! | TTATTTTAATCTATAACAAA+TGG | - | chr4.1:955545-955564 | None:intergenic | 10.0% |
| !! | AAAAAAGAGAAAAATAGTAT+TGG | - | chr4.1:956078-956097 | None:intergenic | 15.0% |
| !! | AAAATCAACAACAATTTATA+AGG | - | chr4.1:958074-958093 | None:intergenic | 15.0% |
| !! | AATCTTATAAGAATTATTTG+CGG | + | chr4.1:956217-956236 | MS.gene058529:CDS | 15.0% |
| !! | AGAGTAATTTGAATTATTTA+GGG | + | chr4.1:953506-953525 | MS.gene058529:intron | 15.0% |
| !! | ATAAGTAAATACAATATTTC+CGG | - | chr4.1:954041-954060 | None:intergenic | 15.0% |
| !! | ATTGAAAATAATGAATCTAT+TGG | - | chr4.1:953977-953996 | None:intergenic | 15.0% |
| !! | CTTAATATATATCTTACATT+TGG | + | chr4.1:957440-957459 | MS.gene058529:intron | 15.0% |
| !! | TAGAGTAATTTGAATTATTT+AGG | + | chr4.1:953505-953524 | MS.gene058529:intron | 15.0% |
| !! | TTCTTATAAGATTCAAAAAA+CGG | - | chr4.1:956210-956229 | None:intergenic | 15.0% |
| !! | TTTATATACATAACCTAATT+TGG | + | chr4.1:956445-956464 | MS.gene058529:intron | 15.0% |
| !!! | AAAAATGAGTTTGTTAAAAA+TGG | - | chr4.1:955757-955776 | None:intergenic | 15.0% |
| !!! | TATTCAATCATTTATTTTGT+TGG | + | chr4.1:954075-954094 | MS.gene058529:intron | 15.0% |
| !!! | TATTTTAATACTTTTTATGG+GGG | + | chr4.1:955429-955448 | MS.gene058529:intron | 15.0% |
| !!! | TTGAAGAAAATCATTTTTAA+TGG | - | chr4.1:955707-955726 | None:intergenic | 15.0% |
| !! | AAATAAATGAAACTACAAAG+AGG | - | chr4.1:956348-956367 | None:intergenic | 20.0% |
| !! | AAATGATTGAATAAATACAC+TGG | - | chr4.1:954068-954087 | None:intergenic | 20.0% |
| !! | AAGAGAGAAAACATAATTTA+TGG | - | chr4.1:955684-955703 | None:intergenic | 20.0% |
| !! | AATAAAAATTGACAGCAATT+TGG | + | chr4.1:957681-957700 | MS.gene058529:intron | 20.0% |
| !! | ATATCATTAAGAAATCAAAG+TGG | + | chr4.1:958339-958358 | MS.gene058529:intron | 20.0% |
| !! | CATGGTTGAAATAAAAATAA+GGG | - | chr4.1:958317-958336 | None:intergenic | 20.0% |
| !! | GATGGATAATGAATATAATA+AGG | + | chr4.1:957746-957765 | MS.gene058529:intron | 20.0% |
| !! | GATGGTCAATAAATATAATA+AGG | - | chr4.1:958013-958032 | None:intergenic | 20.0% |
| !! | GGTTAATTATATTTAGTAGA+TGG | - | chr4.1:958031-958050 | None:intergenic | 20.0% |
| !! | GTGACAGAAAATAAAAATTA+AGG | - | chr4.1:958270-958289 | None:intergenic | 20.0% |
| !! | GTTATTGACATTAAAAATTG+TGG | + | chr4.1:957950-957969 | MS.gene058529:intron | 20.0% |
| !!! | AGAAATAAAGTCAAAGATTT+TGG | + | chr4.1:957282-957301 | MS.gene058529:CDS | 20.0% |
| !!! | ATAAGGTTTCTGATATTTTT+AGG | + | chr4.1:956137-956156 | MS.gene058529:intron | 20.0% |
| !!! | ATTATTGTTAAGAAAAGCAT+AGG | + | chr4.1:955593-955612 | MS.gene058529:intron | 20.0% |
| !!! | ATTTTATGAACAGAAGATTT+TGG | + | chr4.1:953910-953929 | MS.gene058529:intron | 20.0% |
| !!! | CATTTATGTTGCTTAATATA+AGG | + | chr4.1:956120-956139 | MS.gene058529:intron | 20.0% |
| !!! | CATTTTTAAAAGTTGACTTA+GGG | + | chr4.1:954214-954233 | MS.gene058529:intron | 20.0% |
| !!! | TAAGTAATACTGTTTGTTAT+TGG | + | chr4.1:954569-954588 | MS.gene058529:intron | 20.0% |
| !!! | TTATTTTCTCAAAAAGAGTT+GGG | + | chr4.1:956395-956414 | MS.gene058529:intron | 20.0% |
| !!! | TTTATTTTCTCAAAAAGAGT+TGG | + | chr4.1:956394-956413 | MS.gene058529:intron | 20.0% |
| ! | AAATAATGAATCTATTGGAG+TGG | - | chr4.1:953972-953991 | None:intergenic | 25.0% |
| ! | AAATATACACCTAATAATCG+TGG | + | chr4.1:957928-957947 | MS.gene058529:intron | 25.0% |
| ! | AACTCATATATACTCTAATG+GGG | + | chr4.1:957392-957411 | MS.gene058529:CDS | 25.0% |
| ! | ACAAAGATAATTGTGCATAA+AGG | - | chr4.1:954418-954437 | None:intergenic | 25.0% |
| ! | ACAGTTAAACATTATTTGGA+TGG | - | chr4.1:957877-957896 | None:intergenic | 25.0% |
| ! | ACATATCATGAAGAAAAGTT+AGG | - | chr4.1:954959-954978 | None:intergenic | 25.0% |
| ! | ACTAAAATTGTTGTCTGAAT+TGG | + | chr4.1:954261-954280 | MS.gene058529:intron | 25.0% |
| ! | ACTCTCACAATATTAGTAAT+AGG | + | chr4.1:955517-955536 | MS.gene058529:intron | 25.0% |
| ! | AGAATAAGAGATGATATTCT+TGG | + | chr4.1:953417-953436 | MS.gene058529:intron | 25.0% |
| ! | AGAGTATAGAGTGAAAATTT+GGG | - | chr4.1:955895-955914 | None:intergenic | 25.0% |
| ! | ATAAGATTCAAAAAACGGAT+AGG | - | chr4.1:956205-956224 | None:intergenic | 25.0% |
| ! | ATTAATGACATTCAAAATCG+TGG | - | chr4.1:957812-957831 | None:intergenic | 25.0% |
| ! | ATTAGATGGTATTTATCCTT+GGG | - | chr4.1:955189-955208 | None:intergenic | 25.0% |
| ! | ATTATGGTTTACCTAATAAG+AGG | - | chr4.1:958474-958493 | None:intergenic | 25.0% |
| ! | CAACTCATATATACTCTAAT+GGG | + | chr4.1:957391-957410 | MS.gene058529:CDS | 25.0% |
| ! | CATTATTTGGATGGTTATAA+TGG | - | chr4.1:957868-957887 | None:intergenic | 25.0% |
| ! | CCATGGTTGAAATAAAAATA+AGG | - | chr4.1:958318-958337 | None:intergenic | 25.0% |
| ! | CTCTCACAATATTAGTAATA+GGG | + | chr4.1:955518-955537 | MS.gene058529:intron | 25.0% |
| ! | CTTGGAAATATTTCCAAATA+AGG | - | chr4.1:953588-953607 | None:intergenic | 25.0% |
| ! | GATTTCTTAATGATATACCA+TGG | - | chr4.1:958335-958354 | None:intergenic | 25.0% |
| ! | GGTTATGTATATAAACAAAG+AGG | - | chr4.1:956440-956459 | None:intergenic | 25.0% |
| ! | GTTAATGTAGTTCAAATGTA+TGG | - | chr4.1:958052-958071 | None:intergenic | 25.0% |
| ! | TAACAAACAGTATTACTTAG+TGG | - | chr4.1:954568-954587 | None:intergenic | 25.0% |
| ! | TAAGATTCAAAAAACGGATA+GGG | - | chr4.1:956204-956223 | None:intergenic | 25.0% |
| ! | TAGAGTATAGAGTGAAAATT+TGG | - | chr4.1:955896-955915 | None:intergenic | 25.0% |
| ! | TATCTATTAACCATAACTTG+CGG | + | chr4.1:957903-957922 | MS.gene058529:intron | 25.0% |
| ! | TCAACTCATATATACTCTAA+TGG | + | chr4.1:957390-957409 | MS.gene058529:CDS | 25.0% |
| ! | TCATTATTCTTCTTATTCTC+AGG | + | chr4.1:958606-958625 | MS.gene058529:intron | 25.0% |
| ! | TCGTACAGTTAAACATTATT+TGG | - | chr4.1:957881-957900 | None:intergenic | 25.0% |
| ! | TGAGAAAATAAAACAGAAAG+AGG | - | chr4.1:956386-956405 | None:intergenic | 25.0% |
| ! | TGATCCAAAAGTAAAAATCA+TGG | - | chr4.1:953800-953819 | None:intergenic | 25.0% |
| ! | TGTTTATTCAAATGTATGCA+AGG | + | chr4.1:954847-954866 | MS.gene058529:intron | 25.0% |
| ! | TTATGCACAATTATCTTTGT+GGG | + | chr4.1:954418-954437 | MS.gene058529:CDS | 25.0% |
| ! | TTTATGCACAATTATCTTTG+TGG | + | chr4.1:954417-954436 | MS.gene058529:CDS | 25.0% |
| !! | AATAAAGTCAAAGATTTTGG+TGG | + | chr4.1:957285-957304 | MS.gene058529:CDS | 25.0% |
| !! | AATGCCATGATTTTTACTTT+TGG | + | chr4.1:953793-953812 | MS.gene058529:CDS | 25.0% |
| !! | AATTCAGACAACAATTTTAG+TGG | - | chr4.1:954262-954281 | None:intergenic | 25.0% |
| !! | AGACAAAGATAGAACTTTTA+CGG | + | chr4.1:954712-954731 | MS.gene058529:intron | 25.0% |
| !! | GATTTCCATTTTCTTGTATT+TGG | + | chr4.1:958531-958550 | MS.gene058529:intron | 25.0% |
| !! | TATTTTCTCAAAAAGAGTTG+GGG | + | chr4.1:956396-956415 | MS.gene058529:intron | 25.0% |
| !!! | AAACCTGATTTGAATTTTTC+AGG | + | chr4.1:957060-957079 | MS.gene058529:CDS | 25.0% |
| !!! | AACCTGATTTGAATTTTTCA+GGG | + | chr4.1:957061-957080 | MS.gene058529:CDS | 25.0% |
| !!! | AATACTGTTTGTTATTGGAT+AGG | + | chr4.1:954574-954593 | MS.gene058529:intron | 25.0% |
| !!! | ATAAAGTCAAAGATTTTGGT+GGG | + | chr4.1:957286-957305 | MS.gene058529:CDS | 25.0% |
| !!! | ATTCAGACAACAATTTTAGT+GGG | - | chr4.1:954261-954280 | None:intergenic | 25.0% |
| !!! | CCATTTTTAAAAGTTGACTT+AGG | + | chr4.1:954213-954232 | MS.gene058529:intron | 25.0% |
| !!! | CCTAAGTCAACTTTTAAAAA+TGG | - | chr4.1:954216-954235 | None:intergenic | 25.0% |
| !!! | CCTTATTTTTATTTCAACCA+TGG | + | chr4.1:958315-958334 | MS.gene058529:intron | 25.0% |
| !!! | GAATTTCAAGTTTTTGAGTA+TGG | + | chr4.1:957835-957854 | MS.gene058529:intron | 25.0% |
| !!! | TAATTTTGAAGAAGCTGAAA+AGG | + | chr4.1:957170-957189 | MS.gene058529:CDS | 25.0% |
| !!! | TTTCTGATATTTTTAGGCTA+TGG | + | chr4.1:956143-956162 | MS.gene058529:intron | 25.0% |
| !!! | TTTTCCTTTTGAGAAAAAAC+AGG | - | chr4.1:957363-957382 | None:intergenic | 25.0% |
| !!! | TTTTTATCTTTTTGAGCAGT+AGG | - | chr4.1:955465-955484 | None:intergenic | 25.0% |
| AAAGTGTAAACAACAGAAGA+AGG | - | chr4.1:958383-958402 | None:intergenic | 30.0% | |
| AAATGTGATGGTCAAATTTG+TGG | + | chr4.1:954014-954033 | MS.gene058529:intron | 30.0% | |
| AAGTGTAAACAACAGAAGAA+GGG | - | chr4.1:958382-958401 | None:intergenic | 30.0% | |
| ACTCATATATACTCTAATGG+GGG | + | chr4.1:957393-957412 | MS.gene058529:CDS | 30.0% | |
| AGATAAGCAGGAGTAATTAT+TGG | - | chr4.1:955213-955232 | None:intergenic | 30.0% | |
| ATGAAGTAAGAACAGTGTAA+AGG | - | chr4.1:956559-956578 | None:intergenic | 30.0% | |
| CAAAGCCAAATACAAGAAAA+TGG | - | chr4.1:958539-958558 | None:intergenic | 30.0% | |
| CATCGTTCAACAACTTATTA+TGG | - | chr4.1:958490-958509 | None:intergenic | 30.0% | |
| CATTAGATGGTATTTATCCT+TGG | - | chr4.1:955190-955209 | None:intergenic | 30.0% | |
| CATTTCACGTTATACCATAT+TGG | + | chr4.1:953639-953658 | MS.gene058529:intron | 30.0% | |
| CCAAAATATATGAGTTCATG+AGG | - | chr4.1:953680-953699 | None:intergenic | 30.0% | |
| GAGAATAATCAATTCGCTAT+AGG | - | chr4.1:953226-953245 | None:intergenic | 30.0% | |
| GAGTAATTATTGGCATTAGA+TGG | - | chr4.1:955203-955222 | None:intergenic | 30.0% | |
| GAGTTAGATTGTGAAGATTT+GGG | + | chr4.1:953717-953736 | MS.gene058529:intron | 30.0% | |
| GTTATACCATATTGGAAATG+TGG | + | chr4.1:953647-953666 | MS.gene058529:intron | 30.0% | |
| TAATTAAGTTCATCTGCAGA+TGG | - | chr4.1:957788-957807 | None:intergenic | 30.0% | |
| TACAAGTAACATTGAAGTTC+AGG | - | chr4.1:954920-954939 | None:intergenic | 30.0% | |
| TATATACCTTCAATGTCAAC+TGG | - | chr4.1:956311-956330 | None:intergenic | 30.0% | |
| TCAACAAAATAAATCCAACC+TGG | - | chr4.1:953385-953404 | None:intergenic | 30.0% | |
| TCTTTCCATATCAAATGTGA+TGG | + | chr4.1:954002-954021 | MS.gene058529:intron | 30.0% | |
| TCTTTGTCTACCTGAATATT+TGG | - | chr4.1:954701-954720 | None:intergenic | 30.0% | |
| TGAGTTAGATTGTGAAGATT+TGG | + | chr4.1:953716-953735 | MS.gene058529:intron | 30.0% | |
| TGTCAATAACCACGATTATT+AGG | - | chr4.1:957940-957959 | None:intergenic | 30.0% | |
| TTACACTGTTCTTACTTCAT+GGG | + | chr4.1:956559-956578 | MS.gene058529:CDS | 30.0% | |
| TTCCATAAATCACTTACTTC+AGG | - | chr4.1:954449-954468 | None:intergenic | 30.0% | |
| TTCCTGAAGTAAGTGATTTA+TGG | + | chr4.1:954444-954463 | MS.gene058529:intron | 30.0% | |
| TTGGAAATATTTCCAAGTTG+AGG | + | chr4.1:953591-953610 | MS.gene058529:intron | 30.0% | |
| TTGGAGTTTATGTCATGATT+AGG | + | chr4.1:958556-958575 | MS.gene058529:intron | 30.0% | |
| TTTACACTGTTCTTACTTCA+TGG | + | chr4.1:956558-956577 | MS.gene058529:CDS | 30.0% | |
| TTTGACCATCACATTTGATA+TGG | - | chr4.1:954010-954029 | None:intergenic | 30.0% | |
| ! | AGTAATGCTTTGTGCTATTA+GGG | + | chr4.1:955122-955141 | MS.gene058529:CDS | 30.0% |
| ! | ATTCAAATTTTGTAGGTGCA+TGG | + | chr4.1:954120-954139 | MS.gene058529:intron | 30.0% |
| ! | ATTTTCTCAAAAAGAGTTGG+GGG | + | chr4.1:956397-956416 | MS.gene058529:intron | 30.0% |
| ! | CCTCATGAACTCATATATTT+TGG | + | chr4.1:953677-953696 | MS.gene058529:intron | 30.0% |
| ! | CTTTTCTTCATGATATGTCA+CGG | + | chr4.1:954961-954980 | MS.gene058529:intron | 30.0% |
| ! | GCATACAAGAAAATTTTGGA+AGG | - | chr4.1:953851-953870 | None:intergenic | 30.0% |
| ! | TAATAGCACAAAGCATTACT+GGG | - | chr4.1:955122-955141 | None:intergenic | 30.0% |
| ! | TGGAAATATTTCCAAGTTGA+GGG | + | chr4.1:953592-953611 | MS.gene058529:intron | 30.0% |
| ! | TTTTCTTCATGATATGTCAC+GGG | + | chr4.1:954962-954981 | MS.gene058529:intron | 30.0% |
| ! | TTTTCTTGGTGGAATAAACT+GGG | + | chr4.1:954996-955015 | MS.gene058529:CDS | 30.0% |
| !! | ACCTGATTTGAATTTTTCAG+GGG | + | chr4.1:957062-957081 | MS.gene058529:CDS | 30.0% |
| !! | ATGTTGATGATCTTAGAAAC+TGG | + | chr4.1:956259-956278 | MS.gene058529:CDS | 30.0% |
| !! | CATTTTCTTGTATTTGGCTT+TGG | + | chr4.1:958537-958556 | MS.gene058529:intron | 30.0% |
| !! | GATTTTTCTGAAAAATCACC+AGG | - | chr4.1:956532-956551 | None:intergenic | 30.0% |
| !!! | AGAACCTGTTTTTTCTCAAA+AGG | + | chr4.1:957356-957375 | MS.gene058529:CDS | 30.0% |
| AAAGGGATTTAACGAACAAC+TGG | + | chr4.1:953759-953778 | MS.gene058529:CDS | 35.0% | |
| AAAGTGACAACTGTACAGAT+TGG | - | chr4.1:955948-955967 | None:intergenic | 35.0% | |
| AAATGCACTGCCTAATATGT+TGG | + | chr4.1:955053-955072 | MS.gene058529:CDS | 35.0% | |
| AAATTGCATAAGTGAGTGTG+AGG | - | chr4.1:953880-953899 | None:intergenic | 35.0% | |
| AACATATTAGGCAGTGCATT+TGG | - | chr4.1:955054-955073 | None:intergenic | 35.0% | |
| AATAAAACAGAAAGAGGCAG+AGG | - | chr4.1:956380-956399 | None:intergenic | 35.0% | |
| AATACCACCAGGAAATACAA+AGG | - | chr4.1:956740-956759 | None:intergenic | 35.0% | |
| AATCGAGACACCAACATATT+AGG | - | chr4.1:955066-955085 | None:intergenic | 35.0% | |
| AATTGCATAAGTGAGTGTGA+GGG | - | chr4.1:953879-953898 | None:intergenic | 35.0% | |
| ACAGCAATTTGGATGCTTTA+CGG | + | chr4.1:957692-957711 | MS.gene058529:intron | 35.0% | |
| AGATATTGACGTTCTTTGTG+TGG | + | chr4.1:954152-954171 | MS.gene058529:CDS | 35.0% | |
| AGTTTATGTCATGATTAGGC+TGG | + | chr4.1:958560-958579 | MS.gene058529:intron | 35.0% | |
| ATAGGACTTGGATTTATCAC+AGG | + | chr4.1:954592-954611 | MS.gene058529:intron | 35.0% | |
| ATGTGGTTAATTACGTTCAG+TGG | + | chr4.1:957724-957743 | MS.gene058529:intron | 35.0% | |
| ATTGAGATGCGTGAAGTTAT+GGG | + | chr4.1:954811-954830 | MS.gene058529:CDS | 35.0% | |
| ATTTATCGCATGAAGTTTGC+AGG | + | chr4.1:958136-958155 | MS.gene058529:intron | 35.0% | |
| CAAGAATTATCACACCTTTC+TGG | - | chr4.1:954193-954212 | None:intergenic | 35.0% | |
| CACAATCAGTTAGAAAAAGC+TGG | - | chr4.1:957514-957533 | None:intergenic | 35.0% | |
| CTCTCAATCTAGATGTTCAA+AGG | - | chr4.1:956475-956494 | None:intergenic | 35.0% | |
| CTTTGAACATCTAGATTGAG+AGG | + | chr4.1:956473-956492 | MS.gene058529:intron | 35.0% | |
| GAACTTGGCAAACATCAATT+TGG | + | chr4.1:957308-957327 | MS.gene058529:CDS | 35.0% | |
| GACTGATCAAATCTTGCATT+TGG | + | chr4.1:954673-954692 | MS.gene058529:CDS | 35.0% | |
| GAGATGGATATATTCATTCC+AGG | - | chr4.1:956691-956710 | None:intergenic | 35.0% | |
| GATATTGACGTTCTTTGTGT+GGG | + | chr4.1:954153-954172 | MS.gene058529:CDS | 35.0% | |
| GATGATCTTAGAAACTGGAA+AGG | + | chr4.1:956264-956283 | MS.gene058529:CDS | 35.0% | |
| GTATATTTGACCGCAAGTTA+TGG | - | chr4.1:957916-957935 | None:intergenic | 35.0% | |
| TAGATTGAGAGGAACACTTA+TGG | + | chr4.1:956484-956503 | MS.gene058529:intron | 35.0% | |
| TAGCTATGTTGTGCTGAATT+TGG | + | chr4.1:953263-953282 | MS.gene058529:intron | 35.0% | |
| TAGTTTCAAGCAAAATGCAG+AGG | - | chr4.1:954508-954527 | None:intergenic | 35.0% | |
| TATGACAGAGGAATTTCAGA+GGG | + | chr4.1:955278-955297 | MS.gene058529:CDS | 35.0% | |
| TATGAGCTGATGCAATAAGT+TGG | + | chr4.1:958203-958222 | MS.gene058529:intron | 35.0% | |
| TCCCCTGAAAAATTCAAATC+AGG | - | chr4.1:957066-957085 | None:intergenic | 35.0% | |
| TGGGATCGAAATCACAAAAA+GGG | - | chr4.1:953538-953557 | None:intergenic | 35.0% | |
| TTATCCTTGGGATTTCTTCT+AGG | - | chr4.1:955177-955196 | None:intergenic | 35.0% | |
| TTATGACAGAGGAATTTCAG+AGG | + | chr4.1:955277-955296 | MS.gene058529:CDS | 35.0% | |
| TTGGGATCGAAATCACAAAA+AGG | - | chr4.1:953539-953558 | None:intergenic | 35.0% | |
| TTGTATTTCCTGGTGGTATT+CGG | + | chr4.1:956740-956759 | MS.gene058529:CDS | 35.0% | |
| ! | ATACAAAGGAGGGTATATTG+CGG | - | chr4.1:956726-956745 | None:intergenic | 35.0% |
| ! | ATCTCTTGGACTTCAAGTTT+GGG | + | chr4.1:955149-955168 | MS.gene058529:CDS | 35.0% |
| ! | ATGAAGTTTGCAGGCTTTAT+AGG | + | chr4.1:958145-958164 | MS.gene058529:intron | 35.0% |
| ! | CAGTAATGCTTTGTGCTATT+AGG | + | chr4.1:955121-955140 | MS.gene058529:CDS | 35.0% |
| ! | CTAATAGCACAAAGCATTAC+TGG | - | chr4.1:955123-955142 | None:intergenic | 35.0% |
| ! | GCACGCATACAAGAAAATTT+TGG | - | chr4.1:953855-953874 | None:intergenic | 35.0% |
| ! | GCATTTGGTTCCAAATATTC+AGG | + | chr4.1:954688-954707 | MS.gene058529:CDS | 35.0% |
| ! | GTTTTCTTGGTGGAATAAAC+TGG | + | chr4.1:954995-955014 | MS.gene058529:CDS | 35.0% |
| ! | TGAAGTTTGCAGGCTTTATA+GGG | + | chr4.1:958146-958165 | MS.gene058529:intron | 35.0% |
| ! | TTTTCTCAAAAAGAGTTGGG+GGG | + | chr4.1:956398-956417 | MS.gene058529:intron | 35.0% |
| !! | AAAGTTGACTTAGGGTTTTC+AGG | + | chr4.1:954222-954241 | MS.gene058529:intron | 35.0% |
| !! | AGACAACAATTTTAGTGGGA+AGG | - | chr4.1:954257-954276 | None:intergenic | 35.0% |
| !! | GAACAGAAGATTTTGGTAAG+AGG | + | chr4.1:953917-953936 | MS.gene058529:intron | 35.0% |
| !! | GTTTGTTATTGGATAGGACT+TGG | + | chr4.1:954580-954599 | MS.gene058529:intron | 35.0% |
| !! | TCTTTAGGGTATACACTCAA+TGG | + | chr4.1:955085-955104 | MS.gene058529:CDS | 35.0% |
| !! | TGGCTTTAGGAAGATTTCTT+TGG | + | chr4.1:954281-954300 | MS.gene058529:intron | 35.0% |
| !! | TTGTTGTCTGAATTGGCTTT+AGG | + | chr4.1:954268-954287 | MS.gene058529:intron | 35.0% |
| !!! | CTGATATTTTTAGGCTATGG+AGG | + | chr4.1:956146-956165 | MS.gene058529:intron | 35.0% |
| AAAGCAAGCAGAAGATAGTC+GGG | + | chr4.1:956888-956907 | MS.gene058529:CDS | 40.0% | |
| AAGAACGTCAATATCTGCTC+CGG | - | chr4.1:954148-954167 | None:intergenic | 40.0% | |
| AGATCATCTTCAAGCTCATC+AGG | - | chr4.1:957255-957274 | None:intergenic | 40.0% | |
| AGGTTGAATTTCACCTCCTT+GGG | + | chr4.1:958626-958645 | MS.gene058529:intron | 40.0% | |
| AGTTGGGAGCAAACAATGAT+AGG | + | chr4.1:956860-956879 | MS.gene058529:CDS | 40.0% | |
| ATACCCTCCTTTGTATTTCC+TGG | + | chr4.1:956730-956749 | MS.gene058529:CDS | 40.0% | |
| ATCAAATTGTCCGCCTTCTT+TGG | - | chr4.1:956611-956630 | None:intergenic | 40.0% | |
| ATCTTAGAAACTGGAAAGGC+TGG | + | chr4.1:956268-956287 | MS.gene058529:CDS | 40.0% | |
| ATGACAGAGGAATTTCAGAG+GGG | + | chr4.1:955279-955298 | MS.gene058529:CDS | 40.0% | |
| ATTACACAAAGCCCTCAACT+TGG | - | chr4.1:953606-953625 | None:intergenic | 40.0% | |
| CAAAATGCAGAGGTGATGAA+GGG | - | chr4.1:954498-954517 | None:intergenic | 40.0% | |
| CAAACTGTTCGCAGTCTTAA+TGG | + | chr4.1:954641-954660 | MS.gene058529:CDS | 40.0% | |
| CAAGAACTAGAAATGCTGAC+AGG | - | chr4.1:956985-957004 | None:intergenic | 40.0% | |
| CAAGCAGAAAAGTCTCAAGA+GGG | + | chr4.1:956832-956851 | MS.gene058529:CDS | 40.0% | |
| CAAGTTCAATGGCATCTCTT+TGG | + | chr4.1:954388-954407 | MS.gene058529:CDS | 40.0% | |
| CATTGAGATGCGTGAAGTTA+TGG | + | chr4.1:954810-954829 | MS.gene058529:CDS | 40.0% | |
| CTTAGTCAAATCTGCGCATA+TGG | + | chr4.1:957574-957593 | MS.gene058529:intron | 40.0% | |
| CTTTACGGCGTTTGAATATG+TGG | + | chr4.1:957707-957726 | MS.gene058529:intron | 40.0% | |
| GAAAGCAAGCAGAAGATAGT+CGG | + | chr4.1:956887-956906 | MS.gene058529:CDS | 40.0% | |
| GAATTCATGCACAGATAAGC+AGG | - | chr4.1:955225-955244 | None:intergenic | 40.0% | |
| GCTCAACCACATTTCCAATA+TGG | - | chr4.1:953656-953675 | None:intergenic | 40.0% | |
| GGTTAATTACGTTCAGTGGA+TGG | + | chr4.1:957728-957747 | MS.gene058529:intron | 40.0% | |
| GTACAGATTGGTGTGCTAAA+TGG | - | chr4.1:955936-955955 | None:intergenic | 40.0% | |
| GTTAGTAGAGACAAATCCCT+TGG | + | chr4.1:955861-955880 | MS.gene058529:intron | 40.0% | |
| GTTCAAAGGACAGCCAAATT+AGG | - | chr4.1:956461-956480 | None:intergenic | 40.0% | |
| GTTCGTTAAATCCCTTTGCA+CGG | - | chr4.1:953756-953775 | None:intergenic | 40.0% | |
| TACATTGCGTGTTATGACAG+AGG | + | chr4.1:955266-955285 | MS.gene058529:CDS | 40.0% | |
| TATATACTCTAATGGGGGCT+TGG | + | chr4.1:957398-957417 | MS.gene058529:CDS | 40.0% | |
| TATATTGCGGCGTTTCACAT+GGG | - | chr4.1:956713-956732 | None:intergenic | 40.0% | |
| TATCAGTAGCAGCAAGTAGA+GGG | - | chr4.1:957146-957165 | None:intergenic | 40.0% | |
| TCAAGCAGAAAAGTCTCAAG+AGG | + | chr4.1:956831-956850 | MS.gene058529:CDS | 40.0% | |
| TCTCAAGAGGGTAAAGAGTT+GGG | + | chr4.1:956844-956863 | MS.gene058529:CDS | 40.0% | |
| TCTGAAAAATCACCAGGATG+TGG | - | chr4.1:956526-956545 | None:intergenic | 40.0% | |
| TCTTAGAAACTGGAAAGGCT+GGG | + | chr4.1:956269-956288 | MS.gene058529:CDS | 40.0% | |
| TGATGGTCAAATTTGTGGAC+CGG | + | chr4.1:954019-954038 | MS.gene058529:intron | 40.0% | |
| TTGAACTTGAAACCCATCAC+TGG | - | chr4.1:954377-954396 | None:intergenic | 40.0% | |
| TTGGCGACATCATATTCAGT+TGG | - | chr4.1:953170-953189 | None:intergenic | 40.0% | |
| ! | AAATTTGGGACTTACCTCCA+AGG | - | chr4.1:955881-955900 | None:intergenic | 40.0% |
| ! | AATTTGGGACTTACCTCCAA+GGG | - | chr4.1:955880-955899 | None:intergenic | 40.0% |
| ! | ACTTTTGGATCATATCGCCT+AGG | + | chr4.1:953808-953827 | MS.gene058529:CDS | 40.0% |
| ! | ATAAACTGGGCATTGCTTGT+TGG | + | chr4.1:955009-955028 | MS.gene058529:CDS | 40.0% |
| ! | ATGCTTTGTGCTATTAGGGA+AGG | + | chr4.1:955126-955145 | MS.gene058529:CDS | 40.0% |
| ! | CTTTTGGATCATATCGCCTA+GGG | + | chr4.1:953809-953828 | MS.gene058529:CDS | 40.0% |
| ! | GATCTCTTGGACTTCAAGTT+TGG | + | chr4.1:955148-955167 | MS.gene058529:CDS | 40.0% |
| ! | GTCAGCTTTGATATGACTTC+TGG | + | chr4.1:954734-954753 | MS.gene058529:intron | 40.0% |
| ! | GTTACTTTGGATGGGCATTT+AGG | - | chr4.1:956766-956785 | None:intergenic | 40.0% |
| ! | GTTGGTGTCTCGATTCTTTA+GGG | + | chr4.1:955071-955090 | MS.gene058529:CDS | 40.0% |
| ! | TGTTGGTGTCTCGATTCTTT+AGG | + | chr4.1:955070-955089 | MS.gene058529:CDS | 40.0% |
| ! | TTTTGGATCATATCGCCTAG+GGG | + | chr4.1:953810-953829 | MS.gene058529:CDS | 40.0% |
| !! | CAAAGATTTTGGTGGGAACT+TGG | + | chr4.1:957293-957312 | MS.gene058529:CDS | 40.0% |
| !! | GTGATGGGTTTCAAGTTCAA+TGG | + | chr4.1:954377-954396 | MS.gene058529:CDS | 40.0% |
| !!! | GTTGCTTTTCACTGATCCAT+TGG | - | chr4.1:957112-957131 | None:intergenic | 40.0% |
| AAAAACAGCACCATACCCCT+AGG | - | chr4.1:953828-953847 | None:intergenic | 45.0% | |
| AAAACCGTTAGCCGTGCAAA+GGG | + | chr4.1:953742-953761 | MS.gene058529:CDS | 45.0% | |
| AAATCCCTTTGCACGGCTAA+CGG | - | chr4.1:953749-953768 | None:intergenic | 45.0% | |
| AAGGCTTGATGTACCTCACA+TGG | - | chr4.1:957222-957241 | None:intergenic | 45.0% | |
| AATGCCCATCCAAAGTAACC+TGG | + | chr4.1:956767-956786 | MS.gene058529:CDS | 45.0% | |
| ACCACCAGGAAATACAAAGG+AGG | - | chr4.1:956737-956756 | None:intergenic | 45.0% | |
| ACCTAGACATGCAACCAGAA+AGG | + | chr4.1:954176-954195 | MS.gene058529:CDS | 45.0% | |
| AGAACGTCAATATCTGCTCC+GGG | - | chr4.1:954147-954166 | None:intergenic | 45.0% | |
| AGCAGGGATGTTCATGAAGA+TGG | + | chr4.1:956955-956974 | MS.gene058529:CDS | 45.0% | |
| AGTAGAGACAAATCCCTTGG+AGG | + | chr4.1:955864-955883 | MS.gene058529:intron | 45.0% | |
| ATCACTGGAACATGAGCATC+AGG | - | chr4.1:954362-954381 | None:intergenic | 45.0% | |
| ATCAGGACGAAGCGATTTGT+AGG | + | chr4.1:953336-953355 | MS.gene058529:CDS | 45.0% | |
| ATGCCCATCCAAAGTAACCT+GGG | + | chr4.1:956768-956787 | MS.gene058529:CDS | 45.0% | |
| ATGGACCACACACAATCTTC+TGG | - | chr4.1:957203-957222 | None:intergenic | 45.0% | |
| ATTTCGATCCCAAGTGACAG+AGG | + | chr4.1:953546-953565 | MS.gene058529:intron | 45.0% | |
| CCACCAGGAAATACAAAGGA+GGG | - | chr4.1:956736-956755 | None:intergenic | 45.0% | |
| CTATCAGTAGCAGCAAGTAG+AGG | - | chr4.1:957147-957166 | None:intergenic | 45.0% | |
| CTCATCAGGTTCTTCAGGAA+AGG | - | chr4.1:957241-957260 | None:intergenic | 45.0% | |
| CTTACAGCTCCATTGTTCAG+TGG | + | chr4.1:958420-958439 | MS.gene058529:CDS | 45.0% | |
| CTTACTCACCCAGGTTACTT+TGG | - | chr4.1:956779-956798 | None:intergenic | 45.0% | |
| GAGGGGAGATGAAATATGTG+AGG | + | chr4.1:955296-955315 | MS.gene058529:CDS | 45.0% | |
| GATGCTCATGTTCCAGTGAT+GGG | + | chr4.1:954362-954381 | MS.gene058529:CDS | 45.0% | |
| GCAAAATGCAGAGGTGATGA+AGG | - | chr4.1:954499-954518 | None:intergenic | 45.0% | |
| GCAGTGCATTTGGATATAGC+TGG | - | chr4.1:955044-955063 | None:intergenic | 45.0% | |
| GCTATTAGGGAAGGATCTCT+TGG | + | chr4.1:955135-955154 | MS.gene058529:CDS | 45.0% | |
| GCTGGATTTCCACTGAACAA+TGG | - | chr4.1:958432-958451 | None:intergenic | 45.0% | |
| GGATCCTAGAAGAAATCCCA+AGG | + | chr4.1:955170-955189 | MS.gene058529:CDS | 45.0% | |
| GGTTGAATTTCACCTCCTTG+GGG | + | chr4.1:958627-958646 | MS.gene058529:intron | 45.0% | |
| GTATATTGCGGCGTTTCACA+TGG | - | chr4.1:956714-956733 | None:intergenic | 45.0% | |
| GTCATCCAGAAGATTGTGTG+TGG | + | chr4.1:957195-957214 | MS.gene058529:CDS | 45.0% | |
| GTCCTGATTCTCATACAAGC+CGG | - | chr4.1:953324-953343 | None:intergenic | 45.0% | |
| GTCTCAAGAGGGTAAAGAGT+TGG | + | chr4.1:956843-956862 | MS.gene058529:CDS | 45.0% | |
| GTTTAGTACTTGCAAGACGC+CGG | + | chr4.1:953302-953321 | MS.gene058529:intron | 45.0% | |
| TAAGCGACGTTCAGAGCTTA+GGG | + | chr4.1:956795-956814 | MS.gene058529:CDS | 45.0% | |
| TATCACACAGATGCACGACT+GGG | - | chr4.1:956012-956031 | None:intergenic | 45.0% | |
| TCAAGCTCATCAGGTTCTTC+AGG | - | chr4.1:957246-957265 | None:intergenic | 45.0% | |
| TCAGGACGAAGCGATTTGTA+GGG | + | chr4.1:953337-953356 | MS.gene058529:CDS | 45.0% | |
| TCATGAACATCCCTGCTAGA+GGG | - | chr4.1:956952-956971 | None:intergenic | 45.0% | |
| TGATGCTCATGTTCCAGTGA+TGG | + | chr4.1:954361-954380 | MS.gene058529:CDS | 45.0% | |
| TTAGGCTATGGAGGCTAACA+AGG | + | chr4.1:956155-956174 | MS.gene058529:intron | 45.0% | |
| TTATCACACAGATGCACGAC+TGG | - | chr4.1:956013-956032 | None:intergenic | 45.0% | |
| TTCATGAACATCCCTGCTAG+AGG | - | chr4.1:956953-956972 | None:intergenic | 45.0% | |
| TTCTCTTTCCCTCTGTCACT+TGG | - | chr4.1:953558-953577 | None:intergenic | 45.0% | |
| TTCTGTCACACAGTGCCTTT+GGG | + | chr4.1:958281-958300 | MS.gene058529:intron | 45.0% | |
| TTTACCTACAAACCACCTCC+CGG | + | chr4.1:955976-955995 | MS.gene058529:intron | 45.0% | |
| TTTCGATCCCAAGTGACAGA+GGG | + | chr4.1:953547-953566 | MS.gene058529:intron | 45.0% | |
| TTTCTGTCACACAGTGCCTT+TGG | + | chr4.1:958280-958299 | MS.gene058529:intron | 45.0% | |
| ! | AGAGAAGCAGACGCCTTATT+TGG | + | chr4.1:953572-953591 | MS.gene058529:intron | 45.0% |
| ! | CAGGTTGAATTTCACCTCCT+TGG | + | chr4.1:958625-958644 | MS.gene058529:intron | 45.0% |
| ! | GAGACTTTTCTGCTTGACCA+TGG | - | chr4.1:956828-956847 | None:intergenic | 45.0% |
| ! | GCACAAAGCATTACTGGGTT+TGG | - | chr4.1:955117-955136 | None:intergenic | 45.0% |
| ! | GCTCGGTTATCCCTAACTTT+TGG | - | chr4.1:953130-953149 | None:intergenic | 45.0% |
| ! | TCACCCAGGTTACTTTGGAT+GGG | - | chr4.1:956774-956793 | None:intergenic | 45.0% |
| ! | TCTCTTTCCCTCTGTCACTT+GGG | - | chr4.1:953557-953576 | None:intergenic | 45.0% |
| ! | TTTGTCAGCAGTTTTCCCCA+AGG | - | chr4.1:958645-958664 | None:intergenic | 45.0% |
| !! | ACCTTTCTGGTTGCATGTCT+AGG | - | chr4.1:954180-954199 | None:intergenic | 45.0% |
| !! | ATAGTATTGGCCAACCTCTG+AGG | - | chr4.1:956065-956084 | None:intergenic | 45.0% |
| !! | ATTTGTAGGGAGGAAGTGCT+TGG | + | chr4.1:953350-953369 | MS.gene058529:CDS | 45.0% |
| !! | CACTCTATACTCTAGAGCCA+TGG | + | chr4.1:955902-955921 | MS.gene058529:intron | 45.0% |
| !! | TAGTATTGGCCAACCTCTGA+GGG | - | chr4.1:956064-956083 | None:intergenic | 45.0% |
| !! | TTTTTGAGCAGTAGGCCTCA+TGG | - | chr4.1:955457-955476 | None:intergenic | 45.0% |
| !!! | CTTTTTATGGGGGTACCATG+AGG | + | chr4.1:955439-955458 | MS.gene058529:intron | 45.0% |
| !!! | ATTTATTTTAATACTTTTTA+TGG | + | chr4.1:955426-955445 | MS.gene058529:intron | 5.0% |
| !!! | TTTATTTTAATACTTTTTAT+GGG | + | chr4.1:955427-955446 | MS.gene058529:intron | 5.0% |
| AAGGAAGCTCGAGCTGTAGA+TGG | + | chr4.1:954866-954885 | MS.gene058529:intron | 50.0% | |
| AAGGGCTTAATTGCCCCCAA+AGG | - | chr4.1:958299-958318 | None:intergenic | 50.0% | |
| AATGCAGAGGTGATGAAGGG+AGG | - | chr4.1:954495-954514 | None:intergenic | 50.0% | |
| AATGGAGCTGTAAGCTCAGC+AGG | - | chr4.1:958414-958433 | None:intergenic | 50.0% | |
| AATTGTCCGCCTTCTTTGGC+AGG | - | chr4.1:956607-956626 | None:intergenic | 50.0% | |
| ATACTCTAATGGGGGCTTGG+AGG | + | chr4.1:957401-957420 | MS.gene058529:CDS | 50.0% | |
| ATCACACAGATGCACGACTG+GGG | - | chr4.1:956011-956030 | None:intergenic | 50.0% | |
| ATGGGTCTGCAACGTAAGCA+AGG | + | chr4.1:956577-956596 | MS.gene058529:CDS | 50.0% | |
| CAAAACCGTTAGCCGTGCAA+AGG | + | chr4.1:953741-953760 | MS.gene058529:CDS | 50.0% | |
| CAAGGAGTTCCTGCCAAAGA+AGG | + | chr4.1:956595-956614 | MS.gene058529:CDS | 50.0% | |
| CACAGCGGAAGCCTCTTATT+AGG | + | chr4.1:958460-958479 | MS.gene058529:CDS | 50.0% | |
| CATTTAGGCCGAATACCACC+AGG | - | chr4.1:956751-956770 | None:intergenic | 50.0% | |
| CCCTCCTTTGTATTTCCTGG+TGG | + | chr4.1:956733-956752 | MS.gene058529:CDS | 50.0% | |
| CGTTCAGAGCTTAGGGTTTC+CGG | + | chr4.1:956802-956821 | MS.gene058529:CDS | 50.0% | |
| CTAATAAGAGGCTTCCGCTG+TGG | - | chr4.1:958462-958481 | None:intergenic | 50.0% | |
| CTGTCAATGCGTACACGCAA+TGG | + | chr4.1:956662-956681 | MS.gene058529:CDS | 50.0% | |
| CTTCAGTGTCATCCACATCC+TGG | + | chr4.1:956511-956530 | MS.gene058529:CDS | 50.0% | |
| CTTCATGATATGTCACGGGC+AGG | + | chr4.1:954966-954985 | MS.gene058529:intron | 50.0% | |
| CTTGCGCCAGTTGACATTGA+AGG | + | chr4.1:956302-956321 | MS.gene058529:CDS | 50.0% | |
| GAACATGAGCATCAGGCACT+GGG | - | chr4.1:954355-954374 | None:intergenic | 50.0% | |
| GAACGTCAATATCTGCTCCG+GGG | - | chr4.1:954146-954165 | None:intergenic | 50.0% | |
| GATCATATCGCCTAGGGGTA+TGG | + | chr4.1:953815-953834 | MS.gene058529:intron | 50.0% | |
| GATTGTGTGTGGTCCATGTG+AGG | + | chr4.1:957206-957225 | MS.gene058529:CDS | 50.0% | |
| GCTAAATGGAGCTTCGACCA+TGG | - | chr4.1:955922-955941 | None:intergenic | 50.0% | |
| GGACTCTACAAAGTCTGCAG+TGG | + | chr4.1:957329-957348 | MS.gene058529:CDS | 50.0% | |
| GGAGGCTAACAAGGCTGATT+GGG | + | chr4.1:956164-956183 | MS.gene058529:CDS | 50.0% | |
| GGGATGACTTGAGAAACTCC+CGG | + | chr4.1:956908-956927 | MS.gene058529:CDS | 50.0% | |
| GGGTATACACTCAATGGCGT+TGG | + | chr4.1:955091-955110 | MS.gene058529:CDS | 50.0% | |
| GGGTTAAGCAACCGCGATTT+CGG | + | chr4.1:953098-953117 | MS.gene058529:CDS | 50.0% | |
| GGTTAAGCAACCGCGATTTC+GGG | + | chr4.1:953099-953118 | MS.gene058529:CDS | 50.0% | |
| GTAAGCGACGTTCAGAGCTT+AGG | + | chr4.1:956794-956813 | MS.gene058529:CDS | 50.0% | |
| GTTGGTCCGCTCAATGAGAT+CGG | - | chr4.1:953152-953171 | None:intergenic | 50.0% | |
| TCTGGGGATAGAGAGACCAA+TGG | + | chr4.1:957093-957112 | MS.gene058529:CDS | 50.0% | |
| TCTGTCACACAGTGCCTTTG+GGG | + | chr4.1:958282-958301 | MS.gene058529:intron | 50.0% | |
| TGGAGGCTAACAAGGCTGAT+TGG | + | chr4.1:956163-956182 | MS.gene058529:CDS | 50.0% | |
| TTGGTCTCTCTATCCCCAGA+AGG | - | chr4.1:957093-957112 | None:intergenic | 50.0% | |
| ! | AAGTTATGGGCTAAGCGTCG+TGG | + | chr4.1:954824-954843 | MS.gene058529:CDS | 50.0% |
| ! | ATTTTGTAGGTGCATGGCCC+CGG | + | chr4.1:954126-954145 | MS.gene058529:intron | 50.0% |
| ! | CAGGTTGCAGGTTTTCTTGG+TGG | + | chr4.1:954985-955004 | MS.gene058529:intron | 50.0% |
| ! | CTCACCCAGGTTACTTTGGA+TGG | - | chr4.1:956775-956794 | None:intergenic | 50.0% |
| ! | CTTTTCTGCTTGACCATGGC+CGG | - | chr4.1:956824-956843 | None:intergenic | 50.0% |
| ! | TTTTAGCCGTGTTCCCTCAG+AGG | + | chr4.1:956048-956067 | MS.gene058529:intron | 50.0% |
| !! | TTTCAGGGGAGTGTCCTTCT+GGG | + | chr4.1:957076-957095 | MS.gene058529:CDS | 50.0% |
| !!! | TTTTCAGGGGAGTGTCCTTC+TGG | + | chr4.1:957075-957094 | MS.gene058529:CDS | 50.0% |
| ACCGAGCCGATCTCATTGAG+CGG | + | chr4.1:953143-953162 | MS.gene058529:CDS | 55.0% | |
| AGAGGGAGGCAGAGAGGAAA+AGG | - | chr4.1:956935-956954 | None:intergenic | 55.0% | |
| AGGCAGAGAGGAAAAGGACC+GGG | - | chr4.1:956929-956948 | None:intergenic | 55.0% | |
| ATATGTCACGGGCAGGTTGC+AGG | + | chr4.1:954973-954992 | MS.gene058529:intron | 55.0% | |
| CTGTCACACAGTGCCTTTGG+GGG | + | chr4.1:958283-958302 | MS.gene058529:intron | 55.0% | |
| GAGGCAGAGAGGAAAAGGAC+CGG | - | chr4.1:956930-956949 | None:intergenic | 55.0% | |
| GCGTACACGCAATGGAAACC+TGG | + | chr4.1:956670-956689 | MS.gene058529:CDS | 55.0% | |
| GGAACATGAGCATCAGGCAC+TGG | - | chr4.1:954356-954375 | None:intergenic | 55.0% | |
| GGACGAAGCGATTTGTAGGG+AGG | + | chr4.1:953340-953359 | MS.gene058529:CDS | 55.0% | |
| GGAGTTCCTGCCAAAGAAGG+CGG | + | chr4.1:956598-956617 | MS.gene058529:CDS | 55.0% | |
| TCCGCTCAATGAGATCGGCT+CGG | - | chr4.1:953147-953166 | None:intergenic | 55.0% | |
| TCGGGCAGCGCCAAAAGTTA+GGG | + | chr4.1:953117-953136 | MS.gene058529:CDS | 55.0% | |
| TGAACATCCCTGCTAGAGGG+AGG | - | chr4.1:956949-956968 | None:intergenic | 55.0% | |
| TGAACGTCGCTTACTCACCC+AGG | - | chr4.1:956788-956807 | None:intergenic | 55.0% | |
| TTCGGGCAGCGCCAAAAGTT+AGG | + | chr4.1:953116-953135 | MS.gene058529:CDS | 55.0% | |
| ! | GGGCAGGTTGCAGGTTTTCT+TGG | + | chr4.1:954982-955001 | MS.gene058529:intron | 55.0% |
| ! | GGGTGCAACTCTGTCACTTC+TGG | - | chr4.1:954335-954354 | None:intergenic | 55.0% |
| ! | GTCAGCAGTTTTCCCCAAGG+AGG | - | chr4.1:958642-958661 | None:intergenic | 55.0% |
| !! | CGCCGGCTTGTATGAGAATC+AGG | + | chr4.1:953319-953338 | MS.gene058529:CDS | 55.0% |
| !! | TTCAGGGGAGTGTCCTTCTG+GGG | + | chr4.1:957077-957096 | MS.gene058529:CDS | 55.0% |
| ACGACTGGGGCAACAAGGAC+CGG | - | chr4.1:955998-956017 | None:intergenic | 60.0% | |
| AGCCGTGTTCCCTCAGAGGT+TGG | + | chr4.1:956052-956071 | MS.gene058529:intron | 60.0% | |
| AGTGCTTGGCAGGCTAGACC+AGG | + | chr4.1:953364-953383 | MS.gene058529:CDS | 60.0% | |
| ATCCAGCACCAGTGCCACAG+CGG | + | chr4.1:958445-958464 | MS.gene058529:CDS | 60.0% | |
| CAAGACGCGTGAGCTCGAGA+AGG | + | chr4.1:953187-953206 | MS.gene058529:CDS | 60.0% | |
| CTCTCTGCCTCCCTCTAGCA+GGG | + | chr4.1:956939-956958 | MS.gene058529:CDS | 60.0% | |
| CTTCTCGAGCTCACGCGTCT+TGG | - | chr4.1:953189-953208 | None:intergenic | 60.0% | |
| CTTGGCAGGCTAGACCAGGT+TGG | + | chr4.1:953368-953387 | MS.gene058529:intron | 60.0% | |
| GAGCTTAGGGTTTCCGGCCA+TGG | + | chr4.1:956808-956827 | MS.gene058529:CDS | 60.0% | |
| GATGCACGACTGGGGCAACA+AGG | - | chr4.1:956003-956022 | None:intergenic | 60.0% | |
| GCGGCGTTTCACATGGGAGA+TGG | - | chr4.1:956707-956726 | None:intergenic | 60.0% | |
| TTTGGCGCTGCCCGAAATCG+CGG | - | chr4.1:953112-953131 | None:intergenic | 60.0% | |
| ! | AGGACCGGGAGGTGGTTTGT+AGG | - | chr4.1:955983-956002 | None:intergenic | 60.0% |
| ! | GGCCAACCTCTGAGGGAACA+CGG | - | chr4.1:956057-956076 | None:intergenic | 60.0% |
| !! | GTAGGGAGGAAGTGCTTGGC+AGG | + | chr4.1:953354-953373 | MS.gene058529:CDS | 60.0% |
| AGAGGCTTCCGCTGTGGCAC+TGG | - | chr4.1:958456-958475 | None:intergenic | 65.0% | |
| CCTCTCTGCCTCCCTCTAGC+AGG | + | chr4.1:956938-956957 | MS.gene058529:CDS | 65.0% | |
| CCTGCTAGAGGGAGGCAGAG+AGG | - | chr4.1:956941-956960 | None:intergenic | 65.0% | |
| CGACTGGGGCAACAAGGACC+GGG | - | chr4.1:955997-956016 | None:intergenic | 65.0% | |
| TGGGGGCTTGGAGGAGCTTG+AGG | + | chr4.1:957410-957429 | MS.gene058529:CDS | 65.0% | |
| !! | TTCCGCTGTGGCACTGGTGC+TGG | - | chr4.1:958450-958469 | None:intergenic | 65.0% |
| CTGGGGCAACAAGGACCGGG+AGG | - | chr4.1:955994-956013 | None:intergenic | 70.0% | |
| GGGCAACAAGGACCGGGAGG+TGG | - | chr4.1:955991-956010 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 953086 | 958673 | 953086 | ID=MS.gene058529 |
| chr4.1 | mRNA | 953086 | 958673 | 953086 | ID=MS.gene058529.t1;Parent=MS.gene058529 |
| chr4.1 | exon | 953086 | 953208 | 953086 | ID=MS.gene058529.t1.exon1;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 953086 | 953208 | 953086 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| chr4.1 | exon | 953308 | 953385 | 953308 | ID=MS.gene058529.t1.exon2;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 953308 | 953385 | 953308 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| chr4.1 | exon | 953724 | 953831 | 953724 | ID=MS.gene058529.t1.exon3;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 953724 | 953831 | 953724 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| chr4.1 | exon | 954135 | 954197 | 954135 | ID=MS.gene058529.t1.exon4;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 954135 | 954197 | 954135 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| chr4.1 | exon | 954290 | 954451 | 954290 | ID=MS.gene058529.t1.exon5;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 954290 | 954451 | 954290 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| chr4.1 | exon | 954596 | 954709 | 954596 | ID=MS.gene058529.t1.exon6;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 954596 | 954709 | 954596 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| chr4.1 | exon | 954797 | 954859 | 954797 | ID=MS.gene058529.t1.exon7;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 954797 | 954859 | 954797 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| chr4.1 | exon | 954988 | 955317 | 954988 | ID=MS.gene058529.t1.exon8;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 954988 | 955317 | 954988 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| chr4.1 | exon | 956159 | 956323 | 956159 | ID=MS.gene058529.t1.exon9;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 956159 | 956323 | 956159 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| chr4.1 | exon | 956487 | 957431 | 956487 | ID=MS.gene058529.t1.exon10;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 956487 | 957431 | 956487 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| chr4.1 | exon | 958411 | 958481 | 958411 | ID=MS.gene058529.t1.exon11;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 958411 | 958481 | 958411 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| chr4.1 | exon | 958628 | 958673 | 958628 | ID=MS.gene058529.t1.exon12;Parent=MS.gene058529.t1 |
| chr4.1 | CDS | 958628 | 958673 | 958628 | ID=cds.MS.gene058529.t1;Parent=MS.gene058529.t1 |
| Gene Sequence |
| Protein sequence |
