AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78390.t1 MTR_2g097960 96.568 437 5 2 1 436 1 428 0.0 868
MS.gene78390.t1 MTR_4g131970 54.768 367 125 6 8 367 67 399 4.03e-129 379
MS.gene78390.t1 MTR_2g022950 53.646 384 117 9 6 371 51 391 4.42e-124 366
MS.gene78390.t1 MTR_4g086600 56.678 307 114 4 12 313 113 405 5.69e-120 357
MS.gene78390.t1 MTR_1g020080 50.681 367 139 6 13 374 95 424 4.97e-119 354
MS.gene78390.t1 MTR_3g101370 50.269 372 146 6 6 374 84 419 3.79e-118 351
MS.gene78390.t1 MTR_2g022950 70.968 186 52 1 6 189 51 236 1.26e-91 278
MS.gene78390.t1 MTR_2g022950 70.968 186 52 1 6 189 51 236 2.41e-91 278
MS.gene78390.t1 MTR_3g101370 63.874 191 68 1 6 195 84 274 2.95e-85 263
MS.gene78390.t1 MTR_1g020080 63.736 182 66 0 13 194 95 276 3.72e-82 255
MS.gene78390.t1 MTR_3g109090 30.159 315 194 7 14 322 43 337 2.28e-36 138
MS.gene78390.t1 MTR_3g109090 30.159 315 194 7 14 322 59 353 2.78e-36 138
MS.gene78390.t1 MTR_4g124940 31.013 316 189 9 14 322 45 338 2.08e-34 132
MS.gene78390.t1 MTR_8g022050 30.945 307 186 11 14 316 61 345 8.33e-32 126
MS.gene78390.t1 MTR_7g102730 25.076 331 191 8 16 339 11 291 4.82e-27 114
MS.gene78390.t1 MTR_7g102730 25.559 313 189 10 14 318 97 373 1.47e-20 94.7
MS.gene78390.t1 MTR_1g061870 25.402 311 179 7 16 321 16 278 4.66e-26 110
MS.gene78390.t1 MTR_3g065190 32.203 177 114 3 16 192 26 196 8.42e-24 102
MS.gene78390.t1 MTR_1g097440 22.912 419 227 10 16 345 31 442 2.91e-23 102
MS.gene78390.t1 MTR_1g056520 29.146 199 130 3 1 191 94 289 3.90e-23 99.8
MS.gene78390.t1 MTR_1g019150 23.939 330 197 8 16 339 33 314 1.03e-22 101
MS.gene78390.t1 MTR_1g019150 24.537 216 146 5 10 212 206 417 1.70e-13 72.8
MS.gene78390.t1 MTR_4g085540 24.272 309 181 8 16 319 35 295 6.01e-21 95.9
MS.gene78390.t1 MTR_4g085540 25.962 208 140 5 16 212 214 418 4.29e-15 77.8
MS.gene78390.t1 MTR_1g045510 31.148 183 114 5 13 190 110 285 2.84e-20 90.9
MS.gene78390.t1 MTR_3g075500 31.868 182 115 4 17 192 111 289 2.90e-19 88.2
MS.gene78390.t1 MTR_3g102040 25.517 290 163 8 16 300 25 266 3.13e-19 90.5
MS.gene78390.t1 MTR_3g102040 24.766 214 147 5 13 215 201 411 8.05e-14 73.9
MS.gene78390.t1 MTR_7g106440 26.203 187 123 3 17 191 111 294 6.87e-19 87.4
MS.gene78390.t1 MTR_6g040190 23.123 333 198 9 13 339 23 303 9.77e-19 89.0
MS.gene78390.t1 MTR_4g104470 29.231 195 115 6 4 188 114 295 1.24e-18 86.3
MS.gene78390.t1 MTR_3g075500 32.716 162 100 4 17 172 111 269 2.20e-17 82.4
MS.gene78390.t1 MTR_1g064230 32.143 196 107 6 17 189 86 278 7.21e-17 80.9
MS.gene78390.t1 MTR_7g053230 52.381 63 29 1 230 291 1 63 1.45e-13 65.9
MS.gene78390.t1 MTR_6g004810 27.746 173 119 2 17 189 47 213 1.69e-13 72.0
MS.gene78390.t1 MTR_1g080150 40.789 76 44 1 107 182 131 205 2.46e-13 69.7
MS.gene78390.t1 MTR_3g079200 37.000 100 57 2 238 336 224 318 2.98e-13 72.0
MS.gene78390.t1 MTR_3g055990 27.778 198 125 6 12 197 3 194 6.42e-13 70.9
MS.gene78390.t1 MTR_3g055990 27.778 198 125 6 12 197 3 194 6.97e-13 70.5
MS.gene78390.t1 MTR_2g026180 27.568 185 115 5 17 188 6 184 3.58e-12 68.6
MS.gene78390.t1 MTR_5g097580 27.778 198 121 7 17 200 8 197 8.76e-12 67.4
MS.gene78390.t1 MTR_5g097580 27.778 198 121 7 17 200 8 197 1.27e-11 66.6
MS.gene78390.t1 MTR_3g084040 41.250 80 45 2 110 189 38 115 2.91e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78390.t1 AT5G19350 68.822 433 109 9 4 433 13 422 0.0 558
MS.gene78390.t1 AT5G19350 68.591 433 106 10 4 433 13 418 0.0 553
MS.gene78390.t1 AT5G54900 53.073 358 124 5 6 357 51 370 2.05e-121 358
MS.gene78390.t1 AT1G11650 52.557 352 127 6 7 357 54 366 2.44e-117 349
MS.gene78390.t1 AT1G47490 50.535 374 146 8 6 374 92 431 1.62e-113 340
MS.gene78390.t1 AT1G49600 50.716 349 141 4 12 359 116 434 4.63e-113 339
MS.gene78390.t1 AT1G47500 51.337 374 143 9 6 374 94 433 1.24e-112 338
MS.gene78390.t1 AT3G19130 52.941 306 128 3 9 313 102 392 8.00e-112 336
MS.gene78390.t1 AT4G27000 53.016 315 119 1 8 322 73 358 1.21e-110 332
MS.gene78390.t1 AT1G49600 54.934 304 114 3 12 313 116 398 3.86e-110 332
MS.gene78390.t1 AT1G49600 54.934 304 114 3 12 313 116 398 3.86e-110 332
MS.gene78390.t1 AT1G11650 55.674 282 95 3 7 287 54 306 1.24e-104 313
MS.gene78390.t1 AT1G47500 62.176 193 70 2 6 195 94 286 3.35e-80 251
MS.gene78390.t1 AT1G47490 61.140 193 72 2 6 195 92 284 3.46e-79 248
MS.gene78390.t1 AT1G54080 32.026 306 184 9 14 316 62 346 5.52e-36 137
MS.gene78390.t1 AT3G14100 32.026 306 184 9 14 316 58 342 7.29e-36 137
MS.gene78390.t1 AT1G54080 31.935 310 183 10 14 316 62 350 4.67e-35 135
MS.gene78390.t1 AT1G17370 31.596 307 184 10 14 316 53 337 7.55e-34 131
MS.gene78390.t1 AT1G17370 31.270 307 182 10 14 316 53 334 8.63e-34 131
MS.gene78390.t1 AT1G22760 25.806 310 178 8 16 320 50 312 9.52e-24 104
MS.gene78390.t1 AT1G22760 26.738 187 119 5 16 189 230 411 4.07e-13 71.6
MS.gene78390.t1 AT3G52380 30.256 195 120 4 9 191 111 301 5.25e-23 99.8
MS.gene78390.t1 AT2G36660 25.402 311 177 10 16 321 25 285 1.31e-22 100
MS.gene78390.t1 AT1G71770 24.516 310 182 9 16 320 60 322 2.42e-22 100
MS.gene78390.t1 AT1G71770 25.134 187 122 5 16 189 240 421 5.86e-12 68.2
MS.gene78390.t1 AT1G71770 24.516 310 182 9 16 320 60 322 2.42e-22 100
MS.gene78390.t1 AT1G71770 25.134 187 122 5 16 189 240 421 5.86e-12 68.2
MS.gene78390.t1 AT1G49760 24.625 333 193 8 16 338 46 330 9.41e-22 98.6
MS.gene78390.t1 AT1G49760 27.568 185 120 4 16 189 225 406 1.02e-13 73.6
MS.gene78390.t1 AT1G49760 24.625 333 193 8 16 338 46 330 9.41e-22 98.6
MS.gene78390.t1 AT1G49760 27.568 185 120 4 16 189 225 406 1.02e-13 73.6
MS.gene78390.t1 AT2G18510 29.148 223 133 5 16 219 26 242 1.78e-21 95.9
MS.gene78390.t1 AT5G50250 33.143 175 111 3 17 188 115 286 1.53e-20 91.7
MS.gene78390.t1 AT4G24770 33.516 182 118 3 8 188 144 323 4.72e-20 91.3
MS.gene78390.t1 AT4G24770 33.516 182 118 3 8 188 144 323 4.72e-20 91.3
MS.gene78390.t1 AT4G34110 23.875 289 167 7 16 299 37 277 9.97e-20 92.4
MS.gene78390.t1 AT4G34110 26.168 214 144 5 9 211 209 419 2.26e-14 75.9
MS.gene78390.t1 AT1G60000 30.899 178 111 4 17 189 87 257 1.49e-19 88.2
MS.gene78390.t1 AT2G23350 23.948 309 182 7 16 319 47 307 1.53e-18 88.6
MS.gene78390.t1 AT2G23350 26.486 185 122 5 16 189 226 407 4.45e-13 71.6
MS.gene78390.t1 AT3G16380 24.437 311 184 6 16 321 22 286 2.83e-18 87.4
MS.gene78390.t1 AT2G37220 29.897 194 111 4 17 188 93 283 4.46e-18 84.7
MS.gene78390.t1 AT2G33410 31.383 188 106 6 17 188 8 188 7.39e-17 82.4
MS.gene78390.t1 AT3G13224 29.630 189 124 3 14 197 9 193 8.83e-16 79.0
MS.gene78390.t1 AT3G52150 28.358 201 117 5 4 185 61 253 3.67e-15 75.5
MS.gene78390.t1 AT3G52150 28.358 201 117 5 4 185 61 253 3.67e-15 75.5
MS.gene78390.t1 AT3G13224 29.570 186 122 3 17 197 21 202 5.51e-15 76.6
MS.gene78390.t1 AT4G14300 31.210 157 92 4 17 160 8 161 3.83e-14 74.3
MS.gene78390.t1 AT4G14300 31.210 157 92 4 17 160 8 161 3.83e-14 74.3
MS.gene78390.t1 AT1G17640 27.322 183 112 3 17 190 68 238 1.46e-13 72.4
MS.gene78390.t1 AT1G17640 27.322 183 112 3 17 190 68 238 1.46e-13 72.4
MS.gene78390.t1 AT1G17640 27.322 183 112 3 17 190 68 238 1.46e-13 72.4
MS.gene78390.t1 AT5G40490 26.064 188 125 5 6 189 33 210 1.50e-13 72.4
MS.gene78390.t1 AT4G16280 25.359 209 147 5 17 221 122 325 3.48e-13 71.6
MS.gene78390.t1 AT1G48920 27.841 176 102 7 15 172 297 465 3.68e-13 71.6
MS.gene78390.t1 AT4G16280 25.359 209 147 5 17 221 47 250 4.74e-13 71.6
MS.gene78390.t1 AT4G16280 25.359 209 147 5 17 221 122 325 5.70e-13 71.6
MS.gene78390.t1 AT5G40490 28.221 163 104 4 30 189 41 193 6.83e-13 70.5
MS.gene78390.t1 AT4G13850 39.506 81 48 1 110 190 37 116 8.89e-13 65.5
MS.gene78390.t1 AT4G13850 39.506 81 48 1 110 190 37 116 1.26e-12 65.5
MS.gene78390.t1 AT3G13224 30.000 160 102 3 17 173 21 173 1.70e-12 67.4
MS.gene78390.t1 AT3G04500 37.500 80 49 1 107 186 136 214 1.94e-12 67.4
MS.gene78390.t1 AT4G13850 40.506 79 46 1 110 188 37 114 2.73e-12 64.7
MS.gene78390.t1 AT4G13850 40.506 79 46 1 110 188 37 114 3.04e-12 64.7
MS.gene78390.t1 AT3G23830 40.741 81 47 1 110 190 37 116 6.81e-12 63.2
MS.gene78390.t1 AT3G23830 40.741 81 47 1 110 190 37 116 6.81e-12 63.2
MS.gene78390.t1 AT5G55550 26.396 197 126 5 13 191 4 199 9.37e-12 67.0
MS.gene78390.t1 AT5G55550 26.396 197 126 5 13 191 4 199 9.37e-12 67.0
MS.gene78390.t1 AT5G55550 26.396 197 126 5 13 191 4 199 9.37e-12 67.0
MS.gene78390.t1 AT5G55550 26.396 197 126 5 13 191 4 199 9.37e-12 67.0
MS.gene78390.t1 AT5G55550 26.396 197 126 5 13 191 4 199 9.37e-12 67.0
MS.gene78390.t1 AT5G55550 26.396 197 126 5 13 191 4 199 1.37e-11 66.6
MS.gene78390.t1 AT5G55550 26.396 197 126 5 13 191 4 199 1.37e-11 66.6
MS.gene78390.t1 AT5G55550 26.396 197 126 5 13 191 4 199 1.37e-11 66.6
MS.gene78390.t1 AT5G55550 26.396 197 126 5 13 191 4 199 1.37e-11 66.6
MS.gene78390.t1 AT5G47620 27.273 187 119 6 13 188 4 184 1.50e-11 66.2
MS.gene78390.t1 AT5G47620 27.273 187 119 6 13 188 4 184 1.50e-11 66.2
MS.gene78390.t1 AT5G47620 27.273 187 119 6 13 188 4 184 1.50e-11 66.2
MS.gene78390.t1 AT4G39260 37.209 86 53 1 107 192 5 89 1.54e-11 60.8
MS.gene78390.t1 AT2G29580 34.066 91 59 1 238 327 224 314 1.63e-11 66.6
MS.gene78390.t1 AT3G07810 27.136 199 125 5 17 201 8 200 2.33e-11 65.9
MS.gene78390.t1 AT3G07810 27.136 199 125 5 17 201 8 200 2.42e-11 65.9
MS.gene78390.t1 AT2G35410 27.072 181 112 6 15 182 95 268 2.85e-11 64.7
MS.gene78390.t1 AT1G07360 34.177 79 51 1 238 315 224 302 5.05e-11 65.1
MS.gene78390.t1 AT4G39260 39.241 79 47 1 107 185 5 82 7.25e-11 60.1

Find 144 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGATTTATGTTGGTAATT+TGG 0.120731 2.3:+5257070 MS.gene78390:intron
AACAAACCTTCCGTTTAAAC+TGG 0.249900 2.3:+5254374 MS.gene78390:CDS
AAATACCTGTCTAGCTGTTT+GGG 0.286831 2.3:-5257519 None:intergenic
CCAGAGGGACCGCCCTAAAA+TGG 0.305529 2.3:-5258928 None:intergenic
AAAATACCTGTCTAGCTGTT+TGG 0.327900 2.3:-5257520 None:intergenic
TTCGATATTTGTGGGTGATT+TGG 0.328238 2.3:+5254444 MS.gene78390:CDS
ACAAATGATGCGAGTTTCTT+GGG 0.332011 2.3:+5257490 MS.gene78390:CDS
GTATTGTTTACATCGTATTC+TGG 0.332261 2.3:-5256975 None:intergenic
AACAAAACCACATGCTTTGC+CGG 0.335534 2.3:-5257168 None:intergenic
CGTTTAAACTGGGCTTCCTT+TGG 0.342734 2.3:+5254385 MS.gene78390:CDS
GAATGATCGGGACCCGCATC+AGG 0.345542 2.3:-5254424 None:intergenic
AACAAATGATGCGAGTTTCT+TGG 0.349426 2.3:+5257489 MS.gene78390:CDS
GGATAGGCGATTTACAATAC+TGG 0.352727 2.3:+5254173 MS.gene78390:CDS
AGTCAATGGAGTGCATACTA+TGG 0.359233 2.3:+5258303 MS.gene78390:CDS
ACCGGTCAACCCGAAGGTTA+TGG 0.366411 2.3:+5254274 MS.gene78390:CDS
TTATATAACTTACCTGTTGC+GGG 0.367839 2.3:-5258419 None:intergenic
CCCTTACTCCTCCCAGTATT+CGG 0.368992 2.3:-5254550 None:intergenic
GGTTATGAAGCTTATGCATA+TGG 0.389478 2.3:+5258339 MS.gene78390:CDS
AAGATGCAGGGAAAGATATT+AGG 0.405827 2.3:+5257464 MS.gene78390:CDS
TTTGTTATACCTTTAGGAAC+AGG 0.406458 2.3:-5254763 None:intergenic
GTTGTGACTGATCCGAATAC+TGG 0.406476 2.3:+5254538 MS.gene78390:CDS
CGAACTTCTTCGAGGGATGC+TGG 0.408501 2.3:-5254142 None:intergenic
CAAAGGAAGCCCAGTTTAAA+CGG 0.412622 2.3:-5254384 None:intergenic
TTCGATGAAACCATAACCTT+CGG 0.415958 2.3:-5254284 None:intergenic
CGGAAGGTTTGTTCGGTACC+AGG 0.416453 2.3:-5254364 None:intergenic
TGATTTGGCTCCGGATGTTA+CGG 0.425043 2.3:+5254459 MS.gene78390:CDS
GTGATGAGAGTGAGAGGAAT+CGG 0.425373 2.3:+5254593 MS.gene78390:CDS
CTTTCCCTGCATCTTCTGAA+TGG 0.425808 2.3:-5257456 None:intergenic
ACCTGGAGGATGGGGACAAC+AGG 0.425840 2.3:+5258272 MS.gene78390:CDS
ACAGGAGCAGCAGCAACAAC+AGG 0.430443 2.3:-5254745 None:intergenic
ACCTGTTGTCCCCATCCTCC+AGG 0.435952 2.3:-5258273 None:intergenic
TCCCGATCATTCGATATTTG+TGG 0.447211 2.3:+5254435 MS.gene78390:CDS
ACCATAACCTTCGGGTTGAC+CGG 0.449485 2.3:-5254275 None:intergenic
TCGATGAAACCATAACCTTC+GGG 0.450007 2.3:-5254283 None:intergenic
AACTGGGCTTCCTTTGGTAT+CGG 0.452673 2.3:+5254391 MS.gene78390:CDS
CCAGCATATGCATACATTGA+AGG 0.454115 2.3:-5258375 None:intergenic
GGGGCGGTGTATGCCGGCAC+TGG 0.455472 2.3:-5256936 None:intergenic
AATCCTTATGCTGCTGCTGT+TGG 0.458426 2.3:+5254706 MS.gene78390:CDS
TCCGAATACTGGGAGGAGTA+AGG 0.459906 2.3:+5254549 MS.gene78390:CDS
CGGTGAACGCCGCCCTGATG+CGG 0.461004 2.3:+5254411 MS.gene78390:CDS
CTGCTGCAAGGATGAGGAAT+GGG 0.461294 2.3:-5258958 None:intergenic
TTATGCATATGGGGCTGCTC+AGG 0.463165 2.3:+5258350 MS.gene78390:CDS
AGGCATTTGAGTGCCGTTGT+AGG 0.465540 2.3:-5254344 None:intergenic
GGAAATTACTTATCAACATC+GGG 0.466329 2.3:-5258592 None:intergenic
GGTGAACGCCGCCCTGATGC+GGG 0.466689 2.3:+5254412 MS.gene78390:CDS
CCCGATCATTCGATATTTGT+GGG 0.467568 2.3:+5254436 MS.gene78390:CDS
ATTATATAACTTACCTGTTG+CGG 0.469981 2.3:-5258420 None:intergenic
TACTTATGTTCGTAGGTTGA+AGG 0.474035 2.3:+5258496 MS.gene78390:intron
GGAAGAGTTGTATGATCCTC+TGG 0.477748 2.3:+5258564 MS.gene78390:CDS
TCTGGTGGAACTATATTCAC+TGG 0.479806 2.3:-5256957 None:intergenic
GTAGCAGCACTAATCCTCAT+AGG 0.480555 2.3:-5254655 None:intergenic
CTGGGAGGAGTAAGGGGTAT+GGG 0.481051 2.3:+5254557 MS.gene78390:CDS
CCTTCAATGTATGCATATGC+TGG 0.484513 2.3:+5258375 MS.gene78390:CDS
GTTATGAAGCTTATGCATAT+GGG 0.486863 2.3:+5258340 MS.gene78390:CDS
TTCACTGGGGCGGTGTATGC+CGG 0.489655 2.3:-5256942 None:intergenic
TTTGCAATGCAGATTTATGT+TGG 0.490899 2.3:+5257062 MS.gene78390:intron
GCTGCTGCTCCTGTTCCTAA+AGG 0.491900 2.3:+5254754 MS.gene78390:CDS
ACAAAACCACATGCTTTGCC+GGG 0.492254 2.3:-5257167 None:intergenic
GTAGGTTTGAAGAACGCGTT+CGG 0.493065 2.3:-5254326 None:intergenic
TCTAGGACGTACCTGGAGGA+TGG 0.494871 2.3:+5258262 MS.gene78390:intron
TATGCATATGCTGGATATGC+TGG 0.494958 2.3:+5258384 MS.gene78390:CDS
AACGCGTTCGGCGGCAGAGT+GGG 0.495405 2.3:-5254314 None:intergenic
TCGAAGAAGTTCGAACCCTA+TGG 0.495608 2.3:+5254152 MS.gene78390:CDS
CTATGCACAATACCCGCAAC+AGG 0.497442 2.3:+5258407 MS.gene78390:CDS
CTAGGACGTACCTGGAGGAT+GGG 0.497812 2.3:+5258263 MS.gene78390:intron
GTTTAAACGGAAGGTTTGTT+CGG 0.500336 2.3:-5254371 None:intergenic
ATCCTTGCAGCAGCAAGCTT+AGG 0.506123 2.3:+5258968 MS.gene78390:CDS
GCACCAACAGCAGCAGCATA+AGG 0.509999 2.3:-5254709 None:intergenic
ATTGTAAATCGCCTATCCAT+AGG 0.510888 2.3:-5254168 None:intergenic
AGAAGCCATTCAGAAGATGC+AGG 0.511885 2.3:+5257451 MS.gene78390:CDS
CCGAATACTGGGAGGAGTAA+GGG 0.512021 2.3:+5254550 MS.gene78390:CDS
ATACTATGGGTATGGACAGC+CGG 0.512029 2.3:+5258317 MS.gene78390:CDS
TGGAGTGCATACTATGGGTA+TGG 0.512551 2.3:+5258309 MS.gene78390:CDS
CTGGTGGAACTATATTCACT+GGG 0.513945 2.3:-5256956 None:intergenic
AAATGGTTCTAGGACGTACC+TGG 0.515634 2.3:+5258255 MS.gene78390:intron
AGCTTGCTGCTGCAAGGATG+AGG 0.516585 2.3:-5258964 None:intergenic
TGTGCCTACCTTGGAACAAA+GGG 0.518894 2.3:+5258543 MS.gene78390:CDS
TGATGAGAGTGAGAGGAATC+GGG 0.519583 2.3:+5254594 MS.gene78390:CDS
TGAGAGGAATCGGGCTATGT+CGG 0.521570 2.3:+5254603 MS.gene78390:CDS
AGTAAATAATCCGTAACATC+CGG 0.522797 2.3:-5254469 None:intergenic
ACCCACAAATATCGAATGAT+CGG 0.525158 2.3:-5254437 None:intergenic
CAACTCTTCCCTTTGTTCCA+AGG 0.526046 2.3:-5258551 None:intergenic
TACTATGGGTATGGACAGCC+GGG 0.528661 2.3:+5258318 MS.gene78390:CDS
ACTCATTATGGGAGTGTTCG+TGG 0.529143 2.3:+5254508 MS.gene78390:CDS
TCTTCCCTTTGTTCCAAGGT+AGG 0.532246 2.3:-5258547 None:intergenic
TAGGCCCCAAACAGCTAGAC+AGG 0.532303 2.3:+5257514 MS.gene78390:CDS
CGGGCTATGTCGGAGATGAA+TGG 0.532900 2.3:+5254613 MS.gene78390:CDS
CTTCTTCGAGGGATGCTGGT+TGG 0.533486 2.3:-5254138 None:intergenic
AGCTATGTCTGTGCCTACCT+TGG 0.534806 2.3:+5258534 MS.gene78390:CDS
ACAAACCTTCCGTTTAAACT+GGG 0.535255 2.3:+5254375 MS.gene78390:CDS
AACAGGTGGATCAAAGTCAA+TGG 0.535631 2.3:+5258289 MS.gene78390:CDS
GGAAGCCCAGTTTAAACGGA+AGG 0.536078 2.3:-5254380 None:intergenic
TACAACGGCACTCAAATGCC+TGG 0.539720 2.3:+5254346 MS.gene78390:CDS
GTCAATGGAGTGCATACTAT+GGG 0.545165 2.3:+5258304 MS.gene78390:CDS
TTGTGACTGATCCGAATACT+GGG 0.547682 2.3:+5254539 MS.gene78390:CDS
ATAGGGTTCGAACTTCTTCG+AGG 0.549325 2.3:-5254150 None:intergenic
CTGTGCCTACCTTGGAACAA+AGG 0.550340 2.3:+5258542 MS.gene78390:CDS
ATTTGTGGGTGATTTGGCTC+CGG 0.555387 2.3:+5254450 MS.gene78390:CDS
ATCCTAAGCTTGCTGCTGCA+AGG 0.556106 2.3:-5258970 None:intergenic
ACTGGGAGGAGTAAGGGGTA+TGG 0.556936 2.3:+5254556 MS.gene78390:CDS
GGCAGCAATATATCCAGTGC+CGG 0.557073 2.3:+5256923 MS.gene78390:intron
CCCACAAATATCGAATGATC+GGG 0.557696 2.3:-5254436 None:intergenic
TTGTTTACATCGTATTCTGG+TGG 0.561644 2.3:-5256972 None:intergenic
ATCATCCGCAACAAAATCAC+CGG 0.568521 2.3:+5254256 MS.gene78390:CDS
GAAGTTCGAACCCTATGGAT+AGG 0.569963 2.3:+5254157 MS.gene78390:CDS
TGGAGGATGGGGACAACAGG+TGG 0.570788 2.3:+5258275 MS.gene78390:CDS
GCTGCTGCAAGGATGAGGAA+TGG 0.571044 2.3:-5258959 None:intergenic
AATTTAGTGATGAGAGTGAG+AGG 0.571499 2.3:+5254587 MS.gene78390:CDS
GGGAAATTACTTATCAACAT+CGG 0.572190 2.3:-5258593 None:intergenic
GGAGATGACTTCGCCGGTGT+GGG 0.574880 2.3:-5254227 None:intergenic
TTGTAAATCGCCTATCCATA+GGG 0.576708 2.3:-5254167 None:intergenic
CGAATACTGGGAGGAGTAAG+GGG 0.590206 2.3:+5254551 MS.gene78390:CDS
TAGGACGTACCTGGAGGATG+GGG 0.597591 2.3:+5258264 MS.gene78390:intron
GAACGCGTTCGGCGGCAGAG+TGG 0.602194 2.3:-5254315 None:intergenic
TAGGGTTCGAACTTCTTCGA+GGG 0.602408 2.3:-5254149 None:intergenic
TGGAGATGACTTCGCCGGTG+TGG 0.604188 2.3:-5254228 None:intergenic
AATGATCGGGACCCGCATCA+GGG 0.607645 2.3:-5254423 None:intergenic
TGGGAGTGTTCGTGGTGCGA+AGG 0.608528 2.3:+5254516 MS.gene78390:CDS
CAAATGATGCGAGTTTCTTG+GGG 0.613630 2.3:+5257491 MS.gene78390:CDS
GGATCTTAATGTCTCAGAGG+AGG 0.616641 2.3:+5257091 MS.gene78390:CDS
GTTCATCCCGGCAAAGCATG+TGG 0.617595 2.3:+5257161 MS.gene78390:CDS
GATAGGCGATTTACAATACT+GGG 0.619711 2.3:+5254174 MS.gene78390:CDS
GTGTCTGTCAAAGTTCATCC+CGG 0.622798 2.3:+5257149 MS.gene78390:CDS
ATTGTTCTACTAGACCTATG+AGG 0.628022 2.3:+5254641 MS.gene78390:CDS
GCCCTAAAATGGCATTTCCG+TGG 0.628522 2.3:-5258917 None:intergenic
GCTGCATATCTCTCAGTCCA+CGG 0.628742 2.3:+5258900 MS.gene78390:CDS
GAAGCCATTCAGAAGATGCA+GGG 0.631248 2.3:+5257452 MS.gene78390:CDS
TTATGAAGCTTATGCATATG+GGG 0.631339 2.3:+5258341 MS.gene78390:CDS
TGATGCGAGTTTCTTGGGGT+AGG 0.638220 2.3:+5257495 MS.gene78390:CDS
GCGGCGTTCACCGATACCAA+AGG 0.642957 2.3:-5254401 None:intergenic
TATGCATAAGCTTCATAACC+CGG 0.644180 2.3:-5258336 None:intergenic
TTTGATGGAGATGACTTCGC+CGG 0.645530 2.3:-5254233 None:intergenic
CGCGTTCTTCAAACCTACAA+CGG 0.646772 2.3:+5254331 MS.gene78390:CDS
AATACCTGTCTAGCTGTTTG+GGG 0.652016 2.3:-5257518 None:intergenic
TCAACATCGGGCATTGCCAG+AGG 0.653213 2.3:-5258580 None:intergenic
AAAATCACCGGTCAACCCGA+AGG 0.657468 2.3:+5254268 MS.gene78390:CDS
ACACACTGCTTCTCCCACAC+CGG 0.659459 2.3:+5254214 MS.gene78390:CDS
TTTGGATCTTAATGTCTCAG+AGG 0.664207 2.3:+5257088 MS.gene78390:CDS
GGTTTGAAGAACGCGTTCGG+CGG 0.681527 2.3:-5254323 None:intergenic
TGGAACTATATTCACTGGGG+CGG 0.686340 2.3:-5256952 None:intergenic
GATCGGGACCCGCATCAGGG+CGG 0.708758 2.3:-5254420 None:intergenic
TGGTTCTAGGACGTACCTGG+AGG 0.726254 2.3:+5258258 MS.gene78390:intron
TGACTGATCCGAATACTGGG+AGG 0.766798 2.3:+5254542 MS.gene78390:CDS
TGGTGGAACTATATTCACTG+GGG 0.789434 2.3:-5256955 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTGTTTATTTATAAATTATT+GGG + chr2.3:5254870-5254889 MS.gene78390:intron 10.0%
!!! TAACAATATTTGAAATTTAA+AGG - chr2.3:5256760-5256779 None:intergenic 10.0%
!! CTTATATATAAGCTTAATAT+AGG - chr2.3:5255732-5255751 None:intergenic 15.0%
!! CTTATATGAAAACAATTTAT+AGG - chr2.3:5255200-5255219 None:intergenic 15.0%
!! GGTGTTTATTTATAAATTAT+TGG + chr2.3:5254869-5254888 MS.gene78390:intron 15.0%
!! TAAATATGAGATTTAAATCT+GGG - chr2.3:5258723-5258742 None:intergenic 15.0%
!! TATATTTGCACTAATAAATT+TGG + chr2.3:5258228-5258247 MS.gene78390:intron 15.0%
!! TGAAAATTTCAAAAATGTTA+CGG - chr2.3:5257018-5257037 None:intergenic 15.0%
!! TGAAATAAGAAAAAATAGAA+TGG - chr2.3:5256664-5256683 None:intergenic 15.0%
!! TTATGGAAATAAAATGAAAT+TGG + chr2.3:5256045-5256064 MS.gene78390:intron 15.0%
!! TTTAAATTTACATATTGCAT+TGG + chr2.3:5258443-5258462 MS.gene78390:intron 15.0%
!!! GTCATTTTTATAAGTAATTT+TGG + chr2.3:5254991-5255010 MS.gene78390:intron 15.0%
!!! TCTCTTTTGTTATTAATTTT+GGG - chr2.3:5255075-5255094 None:intergenic 15.0%
!!! TTTATTGATAATTCGAATTT+AGG + chr2.3:5258027-5258046 MS.gene78390:intron 15.0%
!!! TTTTATAATTAGGATATGTT+TGG + chr2.3:5254797-5254816 MS.gene78390:intron 15.0%
!! AAAATATGATAGAATCAGAA+TGG + chr2.3:5256443-5256462 MS.gene78390:intron 20.0%
!! AAGCATAACAATACATAAAA+AGG - chr2.3:5257734-5257753 None:intergenic 20.0%
!! ACATTCACATAATAGAATTA+AGG - chr2.3:5257386-5257405 None:intergenic 20.0%
!! AGCATAACAATACATAAAAA+GGG - chr2.3:5257733-5257752 None:intergenic 20.0%
!! CTAAATATGAGATTTAAATC+TGG - chr2.3:5258724-5258743 None:intergenic 20.0%
!! GTTAAAAACCTAAACAAATA+TGG - chr2.3:5257666-5257685 None:intergenic 20.0%
!! TTTACTTTATACTAGTAGAT+AGG + chr2.3:5256124-5256143 MS.gene78390:intron 20.0%
!!! AATAAAATGAAATTGGCTTA+TGG + chr2.3:5256052-5256071 MS.gene78390:intron 20.0%
!!! ACAATAGATATGTATTGATA+TGG + chr2.3:5257988-5258007 MS.gene78390:intron 20.0%
!!! AGGTATTTTTTCTTTAGAAA+TGG + chr2.3:5257534-5257553 MS.gene78390:intron 20.0%
!!! ATTTTGATTTAGTACAACTT+AGG + chr2.3:5256875-5256894 MS.gene78390:intron 20.0%
!!! CCTAATTATAAAAAAGTGTA+GGG - chr2.3:5254790-5254809 None:intergenic 20.0%
!!! CTAATAAATTTGGTTCTAAA+TGG + chr2.3:5258238-5258257 MS.gene78390:intron 20.0%
!!! CTCTTTTGTTATTAATTTTG+GGG - chr2.3:5255074-5255093 None:intergenic 20.0%
!!! GTCTCTTTTGTTATTAATTT+TGG - chr2.3:5255076-5255095 None:intergenic 20.0%
!!! GTTATTTTTATATGCTATCT+TGG + chr2.3:5256017-5256036 MS.gene78390:intron 20.0%
!!! TATTTTTCTTGTACCTATAT+GGG + chr2.3:5256510-5256529 MS.gene78390:intron 20.0%
!!! TCCTAATTATAAAAAAGTGT+AGG - chr2.3:5254791-5254810 None:intergenic 20.0%
!!! TTAGATAAAGTTTGTTATGA+TGG - chr2.3:5258124-5258143 None:intergenic 20.0%
!!! TTTGAAATTTTCATTTCCTA+TGG + chr2.3:5257025-5257044 MS.gene78390:intron 20.0%
!!! TTTGTTTAGGTTTTTAACAT+AGG + chr2.3:5257668-5257687 MS.gene78390:intron 20.0%
! AACACATTGCATTGAAAATT+AGG - chr2.3:5256174-5256193 None:intergenic 25.0%
! ACACATTGCATTGAAAATTA+GGG - chr2.3:5256173-5256192 None:intergenic 25.0%
! AGTGCTTATGTATAAGTTAT+TGG + chr2.3:5255433-5255452 MS.gene78390:intron 25.0%
! ATACTTATCTATGATTTCCT+TGG + chr2.3:5256902-5256921 MS.gene78390:intron 25.0%
! ATTATATAACTTACCTGTTG+CGG - chr2.3:5258423-5258442 None:intergenic 25.0%
! CATGTTATAAAAAGAAAGGA+GGG - chr2.3:5258616-5258635 None:intergenic 25.0%
! GTACAAGAAAAATAGAGAAA+CGG - chr2.3:5256504-5256523 None:intergenic 25.0%
! GTGCTTATGTATAAGTTATT+GGG + chr2.3:5255434-5255453 MS.gene78390:intron 25.0%
! TAATGGTTAAAGACTAAAAC+AGG + chr2.3:5257897-5257916 MS.gene78390:intron 25.0%
! TACAAGAAAAATAGAGAAAC+GGG - chr2.3:5256503-5256522 None:intergenic 25.0%
! TTTATTTCCAGAAGTTATCT+AGG - chr2.3:5255247-5255266 None:intergenic 25.0%
!! AAGCAAAACTTTTTGCAATT+TGG + chr2.3:5257119-5257138 MS.gene78390:CDS 25.0%
!! AGTTGAAACTTTGATCTTTT+TGG + chr2.3:5256843-5256862 MS.gene78390:intron 25.0%
!! ATAGATATGTATTGATATGG+AGG + chr2.3:5257991-5258010 MS.gene78390:intron 25.0%
!! ATATAGTTTGTACTTGTGAA+TGG + chr2.3:5256314-5256333 MS.gene78390:intron 25.0%
!! ATTTACTACAAGAGACTTTT+AGG + chr2.3:5254485-5254504 MS.gene78390:CDS 25.0%
!! CTCCTTTCTTTTTATAACAT+GGG + chr2.3:5258615-5258634 MS.gene78390:intron 25.0%
!! CTCTTCTGTTAGTAATTTTA+TGG - chr2.3:5255852-5255871 None:intergenic 25.0%
!! GTCTCTTTTATAAGTCATTT+TGG + chr2.3:5254978-5254997 MS.gene78390:intron 25.0%
!! TATAGTTTGTACTTGTGAAT+GGG + chr2.3:5256315-5256334 MS.gene78390:intron 25.0%
!! TATGTAGAAGTTTGTTTGTT+AGG + chr2.3:5257755-5257774 MS.gene78390:intron 25.0%
!! TTCTGGAAATAAAGTGAAAT+TGG + chr2.3:5255254-5255273 MS.gene78390:intron 25.0%
!! TTTCAACTTTTCCTTTGTAT+AGG + chr2.3:5256606-5256625 MS.gene78390:intron 25.0%
!!! CAATTCAAACAACCTTTTTT+GGG + chr2.3:5255362-5255381 MS.gene78390:intron 25.0%
!!! CCCTACACTTTTTTATAATT+AGG + chr2.3:5254787-5254806 MS.gene78390:intron 25.0%
!!! CTATTTTTCTTGTACCTATA+TGG + chr2.3:5256509-5256528 MS.gene78390:intron 25.0%
!!! TCAATTCAAACAACCTTTTT+TGG + chr2.3:5255361-5255380 MS.gene78390:intron 25.0%
AAATGCACATGAAGTCAATA+TGG - chr2.3:5258846-5258865 None:intergenic 30.0%
AACTTATCCTAGATAACTTC+TGG + chr2.3:5255237-5255256 MS.gene78390:intron 30.0%
AAGTTTGTAGTTATCACAAG+GGG - chr2.3:5258101-5258120 None:intergenic 30.0%
AATGCACATGAAGTCAATAT+GGG - chr2.3:5258845-5258864 None:intergenic 30.0%
ACTTCCACAAAACTAAATAG+TGG - chr2.3:5255464-5255483 None:intergenic 30.0%
AGAATCAGAATGGTATGTAA+AGG + chr2.3:5256453-5256472 MS.gene78390:intron 30.0%
AGGAGTCATATGTATAGATA+TGG + chr2.3:5257932-5257951 MS.gene78390:intron 30.0%
AGTAAATAATCCGTAACATC+CGG - chr2.3:5254472-5254491 None:intergenic 30.0%
AGTCAACAGAATCTGTTATT+AGG + chr2.3:5255035-5255054 MS.gene78390:intron 30.0%
AGTGTAATTCATTGTCACAT+TGG + chr2.3:5255481-5255500 MS.gene78390:intron 30.0%
ATATCTATACATATGACTCC+TGG - chr2.3:5257933-5257952 None:intergenic 30.0%
ATCTTGAAATTGTGAAGGTT+TGG + chr2.3:5257819-5257838 MS.gene78390:intron 30.0%
ATGCTATCTTGGATAACTTA+TGG + chr2.3:5256028-5256047 MS.gene78390:intron 30.0%
ATTACTAACAGAAGAGACAA+TGG + chr2.3:5255856-5255875 MS.gene78390:intron 30.0%
CAAATCGTCCATATTTGTTT+AGG + chr2.3:5257655-5257674 MS.gene78390:intron 30.0%
CATTGAAAATTAGGGCTATT+TGG - chr2.3:5256165-5256184 None:intergenic 30.0%
CCATGTTATAAAAAGAAAGG+AGG - chr2.3:5258617-5258636 None:intergenic 30.0%
CTCCCATGTTATAAAAAGAA+AGG - chr2.3:5258620-5258639 None:intergenic 30.0%
GAGAAGTGAATGTAATTGTA+AGG - chr2.3:5256567-5256586 None:intergenic 30.0%
GGAAATTACTTATCAACATC+GGG - chr2.3:5258595-5258614 None:intergenic 30.0%
GGGAAATTACTTATCAACAT+CGG - chr2.3:5258596-5258615 None:intergenic 30.0%
GTAAAAATACTCAAGATGCA+TGG - chr2.3:5257347-5257366 None:intergenic 30.0%
GTAAGAAAATTGTACATGAC+CGG + chr2.3:5256284-5256303 MS.gene78390:intron 30.0%
GTATTGTTTACATCGTATTC+TGG - chr2.3:5256978-5256997 None:intergenic 30.0%
GTTATGAAGCTTATGCATAT+GGG + chr2.3:5258340-5258359 MS.gene78390:CDS 30.0%
TATCTATACATATGACTCCT+GGG - chr2.3:5257932-5257951 None:intergenic 30.0%
TCAAGATGCATGGTAAATTA+GGG - chr2.3:5257337-5257356 None:intergenic 30.0%
TCTTTCAAACAAACTCACAA+GGG + chr2.3:5256101-5256120 MS.gene78390:intron 30.0%
TGAAACTTATTTCCTTTGAG+AGG - chr2.3:5257309-5257328 None:intergenic 30.0%
TGACAAACGAAAAACGTAAT+TGG - chr2.3:5255822-5255841 None:intergenic 30.0%
TGATAATTCGAATTTAGGCT+TGG + chr2.3:5258032-5258051 MS.gene78390:intron 30.0%
TGCTTAAAAAGAGATTAGAG+AGG - chr2.3:5257218-5257237 None:intergenic 30.0%
TGTATAGATATGGTTGTTGA+AGG + chr2.3:5257942-5257961 MS.gene78390:intron 30.0%
TTAAACTTACTGCCCAAAAA+AGG - chr2.3:5255377-5255396 None:intergenic 30.0%
TTACATGGGTCAATACTTAA+TGG + chr2.3:5257880-5257899 MS.gene78390:intron 30.0%
TTACTAACAGAAGAGACAAT+GGG + chr2.3:5255857-5255876 MS.gene78390:intron 30.0%
TTATATAACTTACCTGTTGC+GGG - chr2.3:5258422-5258441 None:intergenic 30.0%
TTATGAAGCTTATGCATATG+GGG + chr2.3:5258341-5258360 MS.gene78390:CDS 30.0%
TTGATAAACACAAATGCACA+AGG - chr2.3:5257591-5257610 None:intergenic 30.0%
TTGCAATTTCGATACATTCA+GGG - chr2.3:5254944-5254963 None:intergenic 30.0%
TTGCGATTTCGATACATTTA+GGG + chr2.3:5255887-5255906 MS.gene78390:intron 30.0%
TTTAAAGGATTGCATAACCT+TGG - chr2.3:5256745-5256764 None:intergenic 30.0%
TTTGCAATGCAGATTTATGT+TGG + chr2.3:5257062-5257081 MS.gene78390:intron 30.0%
TTTGCAATTCGATGCATTTA+GGG + chr2.3:5255105-5255124 MS.gene78390:intron 30.0%
TTTGCAATTTCGATACATTC+AGG - chr2.3:5254945-5254964 None:intergenic 30.0%
TTTGCGATTTCGATACATTT+AGG + chr2.3:5255886-5255905 MS.gene78390:intron 30.0%
! AATAAAGTGAAATTGGCTCA+TGG + chr2.3:5255261-5255280 MS.gene78390:intron 30.0%
! CCTCCTTTCTTTTTATAACA+TGG + chr2.3:5258614-5258633 MS.gene78390:intron 30.0%
! TTACAGCAAAACAACCATTT+TGG - chr2.3:5255943-5255962 None:intergenic 30.0%
! TTTGTTATACCTTTAGGAAC+AGG - chr2.3:5254766-5254785 None:intergenic 30.0%
!! ATTAAGTATTGACCCATGTA+AGG - chr2.3:5257881-5257900 None:intergenic 30.0%
!! ATTGCATTGGTTCATATTGA+AGG + chr2.3:5258456-5258475 MS.gene78390:intron 30.0%
!! ATTTGGTTCTAAATGGTTCT+AGG + chr2.3:5258245-5258264 MS.gene78390:intron 30.0%
!! GCAGATTTATGTTGGTAATT+TGG + chr2.3:5257070-5257089 MS.gene78390:intron 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG - chr2.3:5255666-5255685 None:intergenic 30.0%
!! TTAAGTATTGACCCATGTAA+GGG - chr2.3:5257880-5257899 None:intergenic 30.0%
!! TTGCATTGGTTCATATTGAA+GGG + chr2.3:5258457-5258476 MS.gene78390:intron 30.0%
!!! AGACTTTTAGGACTCATTAT+GGG + chr2.3:5254497-5254516 MS.gene78390:CDS 30.0%
!!! ATGCAAATTTTAGAACCTCA+AGG - chr2.3:5256705-5256724 None:intergenic 30.0%
!!! ATGTGGTTTTGTTCAATTTG+GGG + chr2.3:5257178-5257197 MS.gene78390:CDS 30.0%
!!! CAAACCACTATTTAGTTTTG+TGG + chr2.3:5255457-5255476 MS.gene78390:intron 30.0%
!!! CATGTGGTTTTGTTCAATTT+GGG + chr2.3:5257177-5257196 MS.gene78390:CDS 30.0%
AAAACAGGAAATGATATCCC+AGG + chr2.3:5257912-5257931 MS.gene78390:intron 35.0%
AAAATACCTGTCTAGCTGTT+TGG - chr2.3:5257523-5257542 None:intergenic 35.0%
AAATACCTGTCTAGCTGTTT+GGG - chr2.3:5257522-5257541 None:intergenic 35.0%
AACAAACCTTCCGTTTAAAC+TGG + chr2.3:5254374-5254393 MS.gene78390:CDS 35.0%
AACAAATGATGCGAGTTTCT+TGG + chr2.3:5257489-5257508 MS.gene78390:CDS 35.0%
AACAAGCTGCTTATCCAAAT+AGG + chr2.3:5255788-5255807 MS.gene78390:intron 35.0%
AACATACCATGCCTATACAA+AGG - chr2.3:5256620-5256639 None:intergenic 35.0%
AACTGAACACGAGATATTGA+CGG + chr2.3:5258646-5258665 MS.gene78390:intron 35.0%
AAGATGCAGGGAAAGATATT+AGG + chr2.3:5257464-5257483 MS.gene78390:CDS 35.0%
AATTTAGTGATGAGAGTGAG+AGG + chr2.3:5254587-5254606 MS.gene78390:CDS 35.0%
ACAAACCTTCCGTTTAAACT+GGG + chr2.3:5254375-5254394 MS.gene78390:CDS 35.0%
ACAAATGATGCGAGTTTCTT+GGG + chr2.3:5257490-5257509 MS.gene78390:CDS 35.0%
ACAAGCTGCTTATCCAAATA+GGG + chr2.3:5255789-5255808 MS.gene78390:intron 35.0%
ACCCACAAATATCGAATGAT+CGG - chr2.3:5254440-5254459 None:intergenic 35.0%
AGAAAAATAGAGAAACGGGA+CGG - chr2.3:5256499-5256518 None:intergenic 35.0%
AGCATAAGTGTTTACACTGT+TGG + chr2.3:5254848-5254867 MS.gene78390:intron 35.0%
AGGTTATCTAGATTACCTTG+TGG - chr2.3:5255180-5255199 None:intergenic 35.0%
ATAGACCATCCGATCTAAAT+CGG + chr2.3:5258776-5258795 MS.gene78390:intron 35.0%
ATCTGACTACTTATGTTCGT+AGG + chr2.3:5258489-5258508 MS.gene78390:intron 35.0%
ATTACATGCAATCATGCAGT+CGG - chr2.3:5258816-5258835 None:intergenic 35.0%
ATTGTAAATCGCCTATCCAT+AGG - chr2.3:5254171-5254190 None:intergenic 35.0%
ATTGTTCTACTAGACCTATG+AGG + chr2.3:5254641-5254660 MS.gene78390:CDS 35.0%
CAAAGGAAATAAGTTTCACG+TGG + chr2.3:5257311-5257330 MS.gene78390:intron 35.0%
CATTCCATCAATCATCAACA+CGG - chr2.3:5256395-5256414 None:intergenic 35.0%
CTCAAGATGCATGGTAAATT+AGG - chr2.3:5257338-5257357 None:intergenic 35.0%
CTCTTTCAAACAAACTCACA+AGG + chr2.3:5256100-5256119 MS.gene78390:intron 35.0%
GAGCAATCTTGAAATTGTGA+AGG + chr2.3:5257814-5257833 MS.gene78390:intron 35.0%
GATAGGCGATTTACAATACT+GGG + chr2.3:5254174-5254193 MS.gene78390:CDS 35.0%
GGTTATGAAGCTTATGCATA+TGG + chr2.3:5258339-5258358 MS.gene78390:CDS 35.0%
GTACCTATATGGGTTTAAGA+TGG + chr2.3:5256520-5256539 MS.gene78390:intron 35.0%
GTTCCATCTTAAACCCATAT+AGG - chr2.3:5256526-5256545 None:intergenic 35.0%
GTTTGCAATTCGATGCATTT+AGG + chr2.3:5255104-5255123 MS.gene78390:intron 35.0%
TACAAACTATATAGTGACGC+CGG - chr2.3:5256306-5256325 None:intergenic 35.0%
TACATTCACTTCTCGAACTT+TGG + chr2.3:5256573-5256592 MS.gene78390:intron 35.0%
TACTAACAGAAGAGACAATG+GGG + chr2.3:5255858-5255877 MS.gene78390:intron 35.0%
TAGAATAGAACCCCATGTAT+GGG - chr2.3:5257695-5257714 None:intergenic 35.0%
TATGCATAAGCTTCATAACC+CGG - chr2.3:5258339-5258358 None:intergenic 35.0%
TGTTATGGTCATAACTCACA+AGG - chr2.3:5256208-5256227 None:intergenic 35.0%
TTAACATAGGACCCATACAT+GGG + chr2.3:5257681-5257700 MS.gene78390:intron 35.0%
TTCAAAAATGTTACGGCTAC+AGG - chr2.3:5257011-5257030 None:intergenic 35.0%
TTCGATATTTGTGGGTGATT+TGG + chr2.3:5254444-5254463 MS.gene78390:CDS 35.0%
TTCGATGAAACCATAACCTT+CGG - chr2.3:5254287-5254306 None:intergenic 35.0%
TTGCAATTCGATGCATTTAG+GGG + chr2.3:5255106-5255125 MS.gene78390:intron 35.0%
TTGGAAGGGTTTATGTTCTT+AGG + chr2.3:5255324-5255343 MS.gene78390:intron 35.0%
TTGTAAATCGCCTATCCATA+GGG - chr2.3:5254170-5254189 None:intergenic 35.0%
TTGTTTACATCGTATTCTGG+TGG - chr2.3:5256975-5256994 None:intergenic 35.0%
TTTAACATAGGACCCATACA+TGG + chr2.3:5257680-5257699 MS.gene78390:intron 35.0%
TTTGATATGTTGCCTCTCAA+AGG + chr2.3:5257294-5257313 MS.gene78390:intron 35.0%
TTTGGATCTTAATGTCTCAG+AGG + chr2.3:5257088-5257107 MS.gene78390:CDS 35.0%
! ACTTTTCCTTTGTATAGGCA+TGG + chr2.3:5256611-5256630 MS.gene78390:intron 35.0%
! ATAAGGATTTTGCTGATACC+CGG - chr2.3:5254695-5254714 None:intergenic 35.0%
! CGGCAAATTTTCAATCAAAC+AGG - chr2.3:5256375-5256394 None:intergenic 35.0%
! GTTTAAACGGAAGGTTTGTT+CGG - chr2.3:5254374-5254393 None:intergenic 35.0%
! TACTTATGTTCGTAGGTTGA+AGG + chr2.3:5258496-5258515 MS.gene78390:intron 35.0%
! TTGTGGCAAATCAACCATTT+TGG - chr2.3:5255163-5255182 None:intergenic 35.0%
! TTTGTTGCGGATGATTTTGA+TGG - chr2.3:5254251-5254270 None:intergenic 35.0%
! TTTGTTTGTTAGGACATGTG+TGG + chr2.3:5257765-5257784 MS.gene78390:intron 35.0%
!! AAAATGGTTGATTTGCCACA+AGG + chr2.3:5255162-5255181 MS.gene78390:intron 35.0%
!! AAAGTATGTAAGAGCACCAT+AGG - chr2.3:5257044-5257063 None:intergenic 35.0%
!! AGTGTAACTTGCTGTAACAT+TGG + chr2.3:5254917-5254936 MS.gene78390:intron 35.0%
!! TAGAGCGTTGTTGAATGTTA+TGG - chr2.3:5256223-5256242 None:intergenic 35.0%
!! TAGGGCTTTGTTATACCTTT+AGG - chr2.3:5254772-5254791 None:intergenic 35.0%
!!! GAGACTTTTAGGACTCATTA+TGG + chr2.3:5254496-5254515 MS.gene78390:CDS 35.0%
!!! GCATGTGGTTTTGTTCAATT+TGG + chr2.3:5257176-5257195 MS.gene78390:CDS 35.0%
AACAAAACCACATGCTTTGC+CGG - chr2.3:5257171-5257190 None:intergenic 40.0%
AACAGGTGGATCAAAGTCAA+TGG + chr2.3:5258289-5258308 MS.gene78390:CDS 40.0%
AACTTGTGAATGGCCAATGT+GGG + chr2.3:5257843-5257862 MS.gene78390:intron 40.0%
AAGGATTGCATAACCTTGGT+AGG - chr2.3:5256741-5256760 None:intergenic 40.0%
AAGGTTTGGCAACTTGTGAA+TGG + chr2.3:5257833-5257852 MS.gene78390:intron 40.0%
AATACCTGTCTAGCTGTTTG+GGG - chr2.3:5257521-5257540 None:intergenic 40.0%
AATTGGCGACTATCCCTATT+TGG - chr2.3:5255805-5255824 None:intergenic 40.0%
ACATTGAGAGACCCTTACAT+GGG + chr2.3:5257866-5257885 MS.gene78390:intron 40.0%
ACCTTGGTAGGGTAAAAAGA+AGG - chr2.3:5256729-5256748 None:intergenic 40.0%
ACTTCCAGAAACCAAGATAG+CGG - chr2.3:5254900-5254919 None:intergenic 40.0%
AGGATTGCATAACCTTGGTA+GGG - chr2.3:5256740-5256759 None:intergenic 40.0%
AGTCAATGGAGTGCATACTA+TGG + chr2.3:5258303-5258322 MS.gene78390:CDS 40.0%
AGTCTGCTTGAAAGAGCTTA+CGG - chr2.3:5255305-5255324 None:intergenic 40.0%
ATCATCCGCAACAAAATCAC+CGG + chr2.3:5254256-5254275 MS.gene78390:CDS 40.0%
ATTGTATGCAGTCTTGCAGT+CGG + chr2.3:5258675-5258694 MS.gene78390:intron 40.0%
CAAAGGAAGCCCAGTTTAAA+CGG - chr2.3:5254387-5254406 None:intergenic 40.0%
CAAATGATGCGAGTTTCTTG+GGG + chr2.3:5257491-5257510 MS.gene78390:CDS 40.0%
CAAATGCAAGACTTTGTCCT+AGG - chr2.3:5256822-5256841 None:intergenic 40.0%
CACACATTCAAGGACCAAAA+TGG + chr2.3:5255146-5255165 MS.gene78390:intron 40.0%
CCAGCATATGCATACATTGA+AGG - chr2.3:5258378-5258397 None:intergenic 40.0%
CCCACAAATATCGAATGATC+GGG - chr2.3:5254439-5254458 None:intergenic 40.0%
CCCGATCATTCGATATTTGT+GGG + chr2.3:5254436-5254455 MS.gene78390:CDS 40.0%
CCTTCAATGTATGCATATGC+TGG + chr2.3:5258375-5258394 MS.gene78390:CDS 40.0%
CTAAATCGGACGGCAAAAAA+GGG + chr2.3:5258790-5258809 MS.gene78390:intron 40.0%
CTAGAATAGAACCCCATGTA+TGG - chr2.3:5257696-5257715 None:intergenic 40.0%
CTGCATGATTGCATGTAATC+TGG + chr2.3:5258817-5258836 MS.gene78390:intron 40.0%
CTGGTGGAACTATATTCACT+GGG - chr2.3:5256959-5256978 None:intergenic 40.0%
GAGATATGCAGCATTTAACC+TGG - chr2.3:5258892-5258911 None:intergenic 40.0%
GGATAGGCGATTTACAATAC+TGG + chr2.3:5254173-5254192 MS.gene78390:CDS 40.0%
GTCAATGGAGTGCATACTAT+GGG + chr2.3:5258304-5258323 MS.gene78390:CDS 40.0%
TAACATAGGACCCATACATG+GGG + chr2.3:5257682-5257701 MS.gene78390:intron 40.0%
TAAGCTCTTTCAAGCAGACT+TGG + chr2.3:5255305-5255324 MS.gene78390:intron 40.0%
TAGAACCTCAAGGCTAAAGT+TGG - chr2.3:5256695-5256714 None:intergenic 40.0%
TATGCATATGCTGGATATGC+TGG + chr2.3:5258384-5258403 MS.gene78390:CDS 40.0%
TCCCGATCATTCGATATTTG+TGG + chr2.3:5254435-5254454 MS.gene78390:CDS 40.0%
TCGATGAAACCATAACCTTC+GGG - chr2.3:5254286-5254305 None:intergenic 40.0%
TCTAAATCGGACGGCAAAAA+AGG + chr2.3:5258789-5258808 MS.gene78390:intron 40.0%
TCTGGTGGAACTATATTCAC+TGG - chr2.3:5256960-5256979 None:intergenic 40.0%
TCTTTCAAGCAGACTTGGAA+GGG + chr2.3:5255310-5255329 MS.gene78390:intron 40.0%
TGGTGGAACTATATTCACTG+GGG - chr2.3:5256958-5256977 None:intergenic 40.0%
TGGTTCTCGAATCTGTTCTT+AGG + chr2.3:5255558-5255577 MS.gene78390:intron 40.0%
TTAACCTGGCAAAGCAATCA+AGG - chr2.3:5258878-5258897 None:intergenic 40.0%
TTGAAAGAGCTTACGGAATC+AGG - chr2.3:5255298-5255317 None:intergenic 40.0%
TTGTGACTGATCCGAATACT+GGG + chr2.3:5254539-5254558 MS.gene78390:CDS 40.0%
! TAAGGATTTTGCTGATACCC+GGG - chr2.3:5254694-5254713 None:intergenic 40.0%
! TGTACTTGTGAATGGGTTTC+TGG + chr2.3:5256322-5256341 MS.gene78390:intron 40.0%
! TTTTGCCGTCCGATTTAGAT+CGG - chr2.3:5258788-5258807 None:intergenic 40.0%
! TTTTGGTCCTTGAATGTGTG+AGG - chr2.3:5255146-5255165 None:intergenic 40.0%
!! CGTGTTGATGATTGATGGAA+TGG + chr2.3:5256393-5256412 MS.gene78390:intron 40.0%
!! GATATCCAACTTTAGCCTTG+AGG + chr2.3:5256687-5256706 MS.gene78390:intron 40.0%
!! GTTTTGTTCAATTTGGGGCT+AGG + chr2.3:5257183-5257202 MS.gene78390:CDS 40.0%
!! TTTGCCGTGTTGATGATTGA+TGG + chr2.3:5256388-5256407 MS.gene78390:intron 40.0%
!!! TCCACGGAAATGCCATTTTA+GGG + chr2.3:5258916-5258935 MS.gene78390:CDS 40.0%
AACTGGGCTTCCTTTGGTAT+CGG + chr2.3:5254391-5254410 MS.gene78390:CDS 45.0%
AATCCTTATGCTGCTGCTGT+TGG + chr2.3:5254706-5254725 MS.gene78390:CDS 45.0%
ACAAAACCACATGCTTTGCC+GGG - chr2.3:5257170-5257189 None:intergenic 45.0%
ACCATCCGATCTAAATCGGA+CGG + chr2.3:5258780-5258799 MS.gene78390:intron 45.0%
AGAAGCCATTCAGAAGATGC+AGG + chr2.3:5257451-5257470 MS.gene78390:CDS 45.0%
ATACTATGGGTATGGACAGC+CGG + chr2.3:5258317-5258336 MS.gene78390:CDS 45.0%
ATAGGGTTCGAACTTCTTCG+AGG - chr2.3:5254153-5254172 None:intergenic 45.0%
ATGTCCTTGATTGCTTTGCC+AGG + chr2.3:5258871-5258890 MS.gene78390:intron 45.0%
CAAACCGCTATCTTGGTTTC+TGG + chr2.3:5254893-5254912 MS.gene78390:intron 45.0%
CAACTCTTCCCTTTGTTCCA+AGG - chr2.3:5258554-5258573 None:intergenic 45.0%
CAACTTGTGAATGGCCAATG+TGG + chr2.3:5257842-5257861 MS.gene78390:intron 45.0%
CACTGGATATATTGCTGCCA+AGG - chr2.3:5256922-5256941 None:intergenic 45.0%
CGCGTTCTTCAAACCTACAA+CGG + chr2.3:5254331-5254350 MS.gene78390:CDS 45.0%
CGTTTAAACTGGGCTTCCTT+TGG + chr2.3:5254385-5254404 MS.gene78390:CDS 45.0%
CTCTTTCAAGCAGACTTGGA+AGG + chr2.3:5255309-5255328 MS.gene78390:intron 45.0%
CTGCAAGACTGCATACAATC+CGG - chr2.3:5258674-5258693 None:intergenic 45.0%
CTTTCCCTGCATCTTCTGAA+TGG - chr2.3:5257459-5257478 None:intergenic 45.0%
GAAGCCATTCAGAAGATGCA+GGG + chr2.3:5257452-5257471 MS.gene78390:CDS 45.0%
GAAGTTCGAACCCTATGGAT+AGG + chr2.3:5254157-5254176 MS.gene78390:CDS 45.0%
GACATTGAGAGACCCTTACA+TGG + chr2.3:5257865-5257884 MS.gene78390:intron 45.0%
GAGATTTAAATCTGGGCCGT+CGG - chr2.3:5258716-5258735 None:intergenic 45.0%
GATGTGACTAGAACCTTCCT+AGG + chr2.3:5256802-5256821 MS.gene78390:intron 45.0%
GGAAGAGTTGTATGATCCTC+TGG + chr2.3:5258564-5258583 MS.gene78390:CDS 45.0%
GGATCTTAATGTCTCAGAGG+AGG + chr2.3:5257091-5257110 MS.gene78390:CDS 45.0%
GTAGCAGCACTAATCCTCAT+AGG - chr2.3:5254658-5254677 None:intergenic 45.0%
GTAGGTTTGAAGAACGCGTT+CGG - chr2.3:5254329-5254348 None:intergenic 45.0%
GTGATGAGAGTGAGAGGAAT+CGG + chr2.3:5254593-5254612 MS.gene78390:CDS 45.0%
GTGTCTGTCAAAGTTCATCC+CGG + chr2.3:5257149-5257168 MS.gene78390:CDS 45.0%
GTTGTGACTGATCCGAATAC+TGG + chr2.3:5254538-5254557 MS.gene78390:CDS 45.0%
TAGGGTTCGAACTTCTTCGA+GGG - chr2.3:5254152-5254171 None:intergenic 45.0%
TATTGGGCAAACCGCTATCT+TGG + chr2.3:5254886-5254905 MS.gene78390:intron 45.0%
TCGAAGAAGTTCGAACCCTA+TGG + chr2.3:5254152-5254171 MS.gene78390:CDS 45.0%
TCTTCCCTTTGTTCCAAGGT+AGG - chr2.3:5258550-5258569 None:intergenic 45.0%
TGATGAGAGTGAGAGGAATC+GGG + chr2.3:5254594-5254613 MS.gene78390:CDS 45.0%
TGCAAGACTTTGTCCTAGGA+AGG - chr2.3:5256818-5256837 None:intergenic 45.0%
TGGAACTATATTCACTGGGG+CGG - chr2.3:5256955-5256974 None:intergenic 45.0%
TGGAGTGCATACTATGGGTA+TGG + chr2.3:5258309-5258328 MS.gene78390:CDS 45.0%
TGTGCCTACCTTGGAACAAA+GGG + chr2.3:5258543-5258562 MS.gene78390:CDS 45.0%
TTCAGCACCTCACACATTCA+AGG + chr2.3:5255136-5255155 MS.gene78390:intron 45.0%
TTTGATGGAGATGACTTCGC+CGG - chr2.3:5254236-5254255 None:intergenic 45.0%
! ACACGAGATATTGACGGATC+CGG + chr2.3:5258652-5258671 MS.gene78390:intron 45.0%
! ATTTGTGGGTGATTTGGCTC+CGG + chr2.3:5254450-5254469 MS.gene78390:CDS 45.0%
! GCCTTCTTTTTACCCTACCA+AGG + chr2.3:5256725-5256744 MS.gene78390:intron 45.0%
! GTTGACCGGTGATTTTGTTG+CGG - chr2.3:5254264-5254283 None:intergenic 45.0%
! TGATACCCGGGAGTTTTCTT+GGG - chr2.3:5254682-5254701 None:intergenic 45.0%
! TGATTTGGCTCCGGATGTTA+CGG + chr2.3:5254459-5254478 MS.gene78390:CDS 45.0%
!! AAATGGTTCTAGGACGTACC+TGG + chr2.3:5258255-5258274 MS.gene78390:intron 45.0%
!! ACTCATTATGGGAGTGTTCG+TGG + chr2.3:5254508-5254527 MS.gene78390:CDS 45.0%
!!! ACGGAAATGCCATTTTAGGG+CGG + chr2.3:5258919-5258938 MS.gene78390:CDS 45.0%
!!! GTCCACGGAAATGCCATTTT+AGG + chr2.3:5258915-5258934 MS.gene78390:CDS 45.0%
AAAATCACCGGTCAACCCGA+AGG + chr2.3:5254268-5254287 MS.gene78390:CDS 50.0%
AGCTATGTCTGTGCCTACCT+TGG + chr2.3:5258534-5258553 MS.gene78390:CDS 50.0%
CCCTTACTCCTCCCAGTATT+CGG - chr2.3:5254553-5254572 None:intergenic 50.0%
CCGAATACTGGGAGGAGTAA+GGG + chr2.3:5254550-5254569 MS.gene78390:CDS 50.0%
CGAATACTGGGAGGAGTAAG+GGG + chr2.3:5254551-5254570 MS.gene78390:CDS 50.0%
CTATGCACAATACCCGCAAC+AGG + chr2.3:5258407-5258426 MS.gene78390:CDS 50.0%
CTGCTGCAAGGATGAGGAAT+GGG - chr2.3:5258961-5258980 None:intergenic 50.0%
CTGTGCCTACCTTGGAACAA+AGG + chr2.3:5258542-5258561 MS.gene78390:CDS 50.0%
GCCCTAAAATGGCATTTCCG+TGG - chr2.3:5258920-5258939 None:intergenic 50.0%
GCTGCATATCTCTCAGTCCA+CGG + chr2.3:5258900-5258919 MS.gene78390:CDS 50.0%
GGAAGCCCAGTTTAAACGGA+AGG - chr2.3:5254383-5254402 None:intergenic 50.0%
GGCAGCAATATATCCAGTGC+CGG + chr2.3:5256923-5256942 MS.gene78390:intron 50.0%
GGTCTCTCAATGTCCCACAT+TGG - chr2.3:5257859-5257878 None:intergenic 50.0%
GTCCATTTCTGACCATCCGA+CGG + chr2.3:5258697-5258716 MS.gene78390:intron 50.0%
TACAACGGCACTCAAATGCC+TGG + chr2.3:5254346-5254365 MS.gene78390:CDS 50.0%
TACTATGGGTATGGACAGCC+GGG + chr2.3:5258318-5258337 MS.gene78390:CDS 50.0%
TCCGAATACTGGGAGGAGTA+AGG + chr2.3:5254549-5254568 MS.gene78390:CDS 50.0%
TGACTGATCCGAATACTGGG+AGG + chr2.3:5254542-5254561 MS.gene78390:CDS 50.0%
TGAGAGGAATCGGGCTATGT+CGG + chr2.3:5254603-5254622 MS.gene78390:CDS 50.0%
TGATGCGAGTTTCTTGGGGT+AGG + chr2.3:5257495-5257514 MS.gene78390:CDS 50.0%
TTATGCATATGGGGCTGCTC+AGG + chr2.3:5258350-5258369 MS.gene78390:CDS 50.0%
TTTAAATCTGGGCCGTCGGA+TGG - chr2.3:5258712-5258731 None:intergenic 50.0%
! AGGCATTTGAGTGCCGTTGT+AGG - chr2.3:5254347-5254366 None:intergenic 50.0%
! ATACCCGGGAGTTTTCTTGG+GGG - chr2.3:5254680-5254699 None:intergenic 50.0%
! CTGATACCCGGGAGTTTTCT+TGG - chr2.3:5254683-5254702 None:intergenic 50.0%
! GATACCCGGGAGTTTTCTTG+GGG - chr2.3:5254681-5254700 None:intergenic 50.0%
!! ACCATAACCTTCGGGTTGAC+CGG - chr2.3:5254278-5254297 None:intergenic 50.0%
!! AGGAATGGGTTTTGTGCCAG+AGG - chr2.3:5258947-5258966 None:intergenic 50.0%
!! GGAATGGGTTTTGTGCCAGA+GGG - chr2.3:5258946-5258965 None:intergenic 50.0%
AATGATCGGGACCCGCATCA+GGG - chr2.3:5254426-5254445 None:intergenic 55.0%
ACACACTGCTTCTCCCACAC+CGG + chr2.3:5254214-5254233 MS.gene78390:CDS 55.0%
ACAGGAGCAGCAGCAACAAC+AGG - chr2.3:5254748-5254767 None:intergenic 55.0%
ACCGGTCAACCCGAAGGTTA+TGG + chr2.3:5254274-5254293 MS.gene78390:CDS 55.0%
ACTGGGAGGAGTAAGGGGTA+TGG + chr2.3:5254556-5254575 MS.gene78390:CDS 55.0%
CGAACTTCTTCGAGGGATGC+TGG - chr2.3:5254145-5254164 None:intergenic 55.0%
CGGGCTATGTCGGAGATGAA+TGG + chr2.3:5254613-5254632 MS.gene78390:CDS 55.0%
CTACCCCCAAGAAAACTCCC+GGG + chr2.3:5254674-5254693 MS.gene78390:CDS 55.0%
CTAGGACGTACCTGGAGGAT+GGG + chr2.3:5258263-5258282 MS.gene78390:intron 55.0%
CTTCTTCGAGGGATGCTGGT+TGG - chr2.3:5254141-5254160 None:intergenic 55.0%
GCACCAACAGCAGCAGCATA+AGG - chr2.3:5254712-5254731 None:intergenic 55.0%
GCCGTCCGATTTAGATCGGA+TGG - chr2.3:5258784-5258803 None:intergenic 55.0%
GCTACCCCCAAGAAAACTCC+CGG + chr2.3:5254673-5254692 MS.gene78390:CDS 55.0%
GCTGCTGCAAGGATGAGGAA+TGG - chr2.3:5258962-5258981 None:intergenic 55.0%
GCTGCTGCTCCTGTTCCTAA+AGG + chr2.3:5254754-5254773 MS.gene78390:CDS 55.0%
GGTTTGAAGAACGCGTTCGG+CGG - chr2.3:5254326-5254345 None:intergenic 55.0%
GTCAGCGCCTCACACATTCA+AGG + chr2.3:5255916-5255935 MS.gene78390:intron 55.0%
GTTCATCCCGGCAAAGCATG+TGG + chr2.3:5257161-5257180 MS.gene78390:CDS 55.0%
TAGGACGTACCTGGAGGATG+GGG + chr2.3:5258264-5258283 MS.gene78390:intron 55.0%
TAGGCCCCAAACAGCTAGAC+AGG + chr2.3:5257514-5257533 MS.gene78390:CDS 55.0%
! CGGAAGGTTTGTTCGGTACC+AGG - chr2.3:5254367-5254386 None:intergenic 55.0%
! CTGGGAGGAGTAAGGGGTAT+GGG + chr2.3:5254557-5254576 MS.gene78390:CDS 55.0%
! TCAACATCGGGCATTGCCAG+AGG - chr2.3:5258583-5258602 None:intergenic 55.0%
! TCTAGGACGTACCTGGAGGA+TGG + chr2.3:5258262-5258281 MS.gene78390:intron 55.0%
!! AGCTTGCTGCTGCAAGGATG+AGG - chr2.3:5258967-5258986 None:intergenic 55.0%
!! TGGTTCTAGGACGTACCTGG+AGG + chr2.3:5258258-5258277 MS.gene78390:intron 55.0%
ACCTGGAGGATGGGGACAAC+AGG + chr2.3:5258272-5258291 MS.gene78390:CDS 60.0%
ACCTGTTGTCCCCATCCTCC+AGG - chr2.3:5258276-5258295 None:intergenic 60.0%
CCAGAGGGACCGCCCTAAAA+TGG - chr2.3:5258931-5258950 None:intergenic 60.0%
GAATGATCGGGACCCGCATC+AGG - chr2.3:5254427-5254446 None:intergenic 60.0%
GCGGCGTTCACCGATACCAA+AGG - chr2.3:5254404-5254423 None:intergenic 60.0%
GGAGATGACTTCGCCGGTGT+GGG - chr2.3:5254230-5254249 None:intergenic 60.0%
GGCCGTCGGATGGTCAGAAA+TGG - chr2.3:5258702-5258721 None:intergenic 60.0%
TGGAGATGACTTCGCCGGTG+TGG - chr2.3:5254231-5254250 None:intergenic 60.0%
TGGAGGATGGGGACAACAGG+TGG + chr2.3:5258275-5258294 MS.gene78390:CDS 60.0%
TTCACTGGGGCGGTGTATGC+CGG - chr2.3:5256945-5256964 None:intergenic 60.0%
!! TGGGAGTGTTCGTGGTGCGA+AGG + chr2.3:5254516-5254535 MS.gene78390:CDS 60.0%
!!! CCATTTTAGGGCGGTCCCTC+TGG + chr2.3:5258928-5258947 MS.gene78390:CDS 60.0%
AACGCGTTCGGCGGCAGAGT+GGG - chr2.3:5254317-5254336 None:intergenic 65.0%
CGGTGAACGCCGCCCTGATG+CGG + chr2.3:5254411-5254430 MS.gene78390:CDS 70.0%
GAACGCGTTCGGCGGCAGAG+TGG - chr2.3:5254318-5254337 None:intergenic 70.0%
GATCGGGACCCGCATCAGGG+CGG - chr2.3:5254423-5254442 None:intergenic 70.0%
GGTGAACGCCGCCCTGATGC+GGG + chr2.3:5254412-5254431 MS.gene78390:CDS 70.0%
GGGGCGGTGTATGCCGGCAC+TGG - chr2.3:5256939-5256958 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 5254121 5258989 5254121 ID=MS.gene78390
chr2.3 mRNA 5254121 5258989 5254121 ID=MS.gene78390.t1;Parent=MS.gene78390
chr2.3 exon 5254121 5254775 5254121 ID=MS.gene78390.t1.exon1;Parent=MS.gene78390.t1
chr2.3 CDS 5254121 5254775 5254121 ID=cds.MS.gene78390.t1;Parent=MS.gene78390.t1
chr2.3 exon 5256928 5257001 5256928 ID=MS.gene78390.t1.exon2;Parent=MS.gene78390.t1
chr2.3 CDS 5256928 5257001 5256928 ID=cds.MS.gene78390.t1;Parent=MS.gene78390.t1
chr2.3 exon 5257074 5257204 5257074 ID=MS.gene78390.t1.exon3;Parent=MS.gene78390.t1
chr2.3 CDS 5257074 5257204 5257074 ID=cds.MS.gene78390.t1;Parent=MS.gene78390.t1
chr2.3 exon 5257439 5257535 5257439 ID=MS.gene78390.t1.exon4;Parent=MS.gene78390.t1
chr2.3 CDS 5257439 5257535 5257439 ID=cds.MS.gene78390.t1;Parent=MS.gene78390.t1
chr2.3 exon 5258267 5258428 5258267 ID=MS.gene78390.t1.exon5;Parent=MS.gene78390.t1
chr2.3 CDS 5258267 5258428 5258267 ID=cds.MS.gene78390.t1;Parent=MS.gene78390.t1
chr2.3 exon 5258511 5258605 5258511 ID=MS.gene78390.t1.exon6;Parent=MS.gene78390.t1
chr2.3 CDS 5258511 5258605 5258511 ID=cds.MS.gene78390.t1;Parent=MS.gene78390.t1
chr2.3 exon 5258893 5258989 5258893 ID=MS.gene78390.t1.exon7;Parent=MS.gene78390.t1
chr2.3 CDS 5258893 5258989 5258893 ID=cds.MS.gene78390.t1;Parent=MS.gene78390.t1
Gene Sequence

>MS.gene78390

ATGGCAACAACGTATCACCAACCAGCATCCCTCGAAGAAGTTCGAACCCTATGGATAGGCGATTTACAATACTGGGTAGACGAAAACTATCTCACACACTGCTTCTCCCACACCGGCGAAGTCATCTCCATCAAAATCATCCGCAACAAAATCACCGGTCAACCCGAAGGTTATGGTTTCATCGAATTCGTCTCCCACTCTGCCGCCGAACGCGTTCTTCAAACCTACAACGGCACTCAAATGCCTGGTACCGAACAAACCTTCCGTTTAAACTGGGCTTCCTTTGGTATCGGTGAACGCCGCCCTGATGCGGGTCCCGATCATTCGATATTTGTGGGTGATTTGGCTCCGGATGTTACGGATTATTTACTACAAGAGACTTTTAGGACTCATTATGGGAGTGTTCGTGGTGCGAAGGTTGTGACTGATCCGAATACTGGGAGGAGTAAGGGGTATGGGTTTGTTAAATTTAGTGATGAGAGTGAGAGGAATCGGGCTATGTCGGAGATGAATGGTGTTTATTGTTCTACTAGACCTATGAGGATTAGTGCTGCTACCCCCAAGAAAACTCCCGGGTATCAGCAAAATCCTTATGCTGCTGCTGTTGGTGCTGTTGCTGTTGCTCCTGTTGTTGCTGCTGCTCCTGTTCCTAAAGGTATAACAAAGCCCTACACTTTTTTATAATTAGGATATGTTTGGATAAGTAGTTTAATTAAGTGCTTATAATAGCATAAGTGTTTACACTGTTGGTGTTTATTTATAAATTATTGGGCAAACCGCTATCTTGGTTTCTGGAAGTGTAACTTGCTGTAACATTGGTCATTGAATGTATCGAAATTGCAAACACATTCACAAGTGTCTCTTTTATAAGTCATTTTTATAAGTAATTTTGGTTCTCAGAATATGTTGTTAGTAGTCAACAGAATCTGTTATTAGGTAGTCAATTTAGTCCCCAAAATTAATAACAAAAGAGACTACGATGTGTTTGCAATTCGATGCATTTAGGGGTTATAGTTTCAGCACCTCACACATTCAAGGACCAAAATGGTTGATTTGCCACAAGGTAATCTAGATAACCTATAAATTGTTTTCATATAAGTTATAAATTGTTTTTGTAACTTATCCTAGATAACTTCTGGAAATAAAGTGAAATTGGCTCATGGACATGTCATAACCTGATTCCGTAAGCTCTTTCAAGCAGACTTGGAAGGGTTTATGTTCTTAGGCAAGTTCAAATAAATCAATTCAAACAACCTTTTTTGGGCAGTAAGTTTAATTAAGTGCTTATAGTATAATTGTTTATCATGTTAGTAGTGCTTATGTATAAGTTATTGGGCAAACCACTATTTAGTTTTGTGGAAGTGTAATTCATTGTCACATTGGTCTCCCTGAATGTATCGAAATTGCAAACACACACGTCTCTTTTATAAGTCATTTTGGTTCTCGAATCTGTTCTTAGGTAGTCTATTAGAGCTTATCTATTGAAGTAAACAACTTATGACACTTTTCACAAGCTTTTCTCAGCTTAATTTCATAAATTCTCCAAGATAGCTTATGAAAACAACTTATAGCATATACAAACAACAATTTAACTTTATTTTATATGTTCCTATATTAAGCTTATATATAAGCACTTATCATGATAAACGCTTGTTCTATATGCTGCAAACAAGCTGCTTATCCAAATAGGGATAGTCGCCAATTACGTTTTTCGTTTGTCAATTTAGTCCATAAAATTACTAACAGAAGAGACAATGGGGATGTTTTTGCGATTTCGATACATTTAGGGATTAGTGTCAGCGCCTCACACATTCAAGGACCAAAATGGTTGTTTTGCTGTAAGTTATTCTATAGAAAAAGATGAAATAAAGTCAAATTGTTTCGTATAAATTATAAGTTATTTTTATATGCTATCTTGGATAACTTATGGAAATAAAATGAAATTGGCTTATGGACATGTCATAAACTGTTTTCGTAAGCTCTTTCAAACAAACTCACAAGGGTTTACTTTATACTAGTAGATAGGTTCAAATAAATTAATCCAAATAGCCCTAATTTTCAATGCAATGTGTTTTTCAGCTTTACCTTGTGAGTTATGACCATAACATTCAACAACGCTCTATTTCATATGTAGTTTTAATTCTCTATCTTTAGTGATTGAGTGTAAGAAAATTGTACATGACCGGCGTCACTATATAGTTTGTACTTGTGAATGGGTTTCTGGTTAAAGACTTACATTGTTATCTATAAGCCTGTTTGATTGAAAATTTGCCGTGTTGATGATTGATGGAATGGTACTAATTGTTGTTGTTGAGACTGTTCAAAATATGATAGAATCAGAATGGTATGTAAAGGAATTTATATTCTATCACATTCCGTCCCGTTTCTCTATTTTTCTTGTACCTATATGGGTTTAAGATGGAACTTACTTGTTTATTAATCTCCTTACAATTACATTCACTTCTCGAACTTTGGAAAGAAAGCTTTTCAACTTTTCCTTTGTATAGGCATGGTATGTTCTTATTCATAAAAAAACTATTCCATTCTATTTTTTCTTATTTCACTTGATATCCAACTTTAGCCTTGAGGTTCTAAAATTTGCATGCCTTCTTTTTACCCTACCAAGGTTATGCAATCCTTTAAATTTCAAATATTGTTAGTCATATAGATATGTATTTCATGATGTGACTAGAACCTTCCTAGGACAAAGTCTTGCATTTGAAGTTGAAACTTTGATCTTTTTGGTGTTCTGATATTTTGATTTAGTACAACTTAGGAAAGATACTTATCTATGATTTCCTTGGCAGCAATATATCCAGTGCCGGCATACACCGCCCCAGTGAATATAGTTCCACCAGAATACGATGTAAACAATACGACTGTAAGTCCTGTAGCCGTAACATTTTTGAAATTTTCATTTCCTATGGTGCTCTTACATACTTTTGCAATGCAGATTTATGTTGGTAATTTGGATCTTAATGTCTCAGAGGAGGAGCTGAAGCAAAACTTTTTGCAATTTGGAGAGATTGTGTCTGTCAAAGTTCATCCCGGCAAAGCATGTGGTTTTGTTCAATTTGGGGCTAGGTCTTCTTTTCCTCTCTAATCTCTTTTTAAGCATTGAAGTGTTTTTGTGATTTTTTTTTAAAATTGTAACTAAAAAGTAATGATAAGATTTTGATATGTTGCCTCTCAAAGGAAATAAGTTTCACGTGGCCCTAATTTACCATGCATCTTGAGTATTTTTACGATCTTTATATTTTTTCCTTAATTCTATTATGTGAATGTTCATTTAATCTTTCTCATATCTGATGTCTGTAGAGCATCTGCTGAAGAAGCCATTCAGAAGATGCAGGGAAAGATATTAGGTCAACAAATGATGCGAGTTTCTTGGGGTAGGCCCCAAACAGCTAGACAGGTATTTTTTCTTTAGAAATGGTTCATTTCTTTACAAAGTACTTAAGCTATAGCCTTGTGCATTTGTGTTTATCAATCATTTCAATTTCAGATATTCTTTCAATGTAGAATCATAGATTACAAATCGTCCATATTTGTTTAGGTTTTTAACATAGGACCCATACATGGGGTTCTATTCTAGTATAATTTTTATTGCCCTTTTTATGTATTGTTATGCTTTTATGTAGAAGTTTGTTTGTTAGGACATGTGTGGAAAATATTCTAGATTCTAGTTCTACTGAGCAATCTTGAAATTGTGAAGGTTTGGCAACTTGTGAATGGCCAATGTGGGACATTGAGAGACCCTTACATGGGTCAATACTTAATGGTTAAAGACTAAAACAGGAAATGATATCCCAGGAGTCATATGTATAGATATGGTTGTTGAAGGTTCAGTAAAAAAGTTAGACTGTAACAATAGATATGTATTGATATGGAGGACGTCAATTAGTGTTTATTGATAATTCGAATTTAGGCTTGGTCTTCTTGATTCTTGATGTATAATTTGCTAATATTAGCAACGACCCCTTGTGATAACTACAAACTTCCATCATAACAAACTTTATCTAAATATTAAAAATACTTGAGATTATATGTCAGTGAGTTTTGATATCTCTGATTAGTTCTATAAGTGTCTCATCATGTTTGAAGTGTTATATTTGCACTAATAAATTTGGTTCTAAATGGTTCTAGGACGTACCTGGAGGATGGGGACAACAGGTGGATCAAAGTCAATGGAGTGCATACTATGGGTATGGACAGCCGGGTTATGAAGCTTATGCATATGGGGCTGCTCAGGATCCTTCAATGTATGCATATGCTGGATATGCTGGCTATGCACAATACCCGCAACAGGTAAGTTATATAATTTTAAATTTACATATTGCATTGGTTCATATTGAAGGGAATGACTTTATCTGACTACTTATGTTCGTAGGTTGAAGGTGCTCAAGACGTATCAGCTATGTCTGTGCCTACCTTGGAACAAAGGGAAGAGTTGTATGATCCTCTGGCAATGCCCGATGTTGATAAGTAATTTCCCTCCTTTCTTTTTATAACATGGGAGATAAACAACTGAACACGAGATATTGACGGATCCGGATTGTATGCAGTCTTGCAGTCGGTCCATTTCTGACCATCCGACGGCCCAGATTTAAATCTCATATTTAGATTTAATAAAACGAATACAATCTGCTTTAAATATAGACCATCCGATCTAAATCGGACGGCAAAAAAGGGCCGACTGCATGATTGCATGTAATCTGGATCCCATATTGACTTCATGTGCATTTCTGACATGTCCTTGATTGCTTTGCCAGGTTAAATGCTGCATATCTCTCAGTCCACGGAAATGCCATTTTAGGGCGGTCCCTCTGGCACAAAACCCATTCCTCATCCTTGCAGCAGCAAGCTTAG
Protein sequence

>MS.gene78390.t1

MATTYHQPASLEEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKTPGYQQNPYAAAVGAVAVAPVVAAAPVPKAIYPVPAYTAPVNIVPPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQMMRVSWGRPQTARQDVPGGWGQQVDQSQWSAYYGYGQPGYEAYAYGAAQDPSMYAYAGYAGYAQYPQQVEGAQDVSAMSVPTLEQREELYDPLAMPDVDKLNAAYLSVHGNAILGRSLWHKTHSSSLQQQA