Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79089.t1 | XP_003601915.1 | 94.7 | 508 | 27 | 0 | 6 | 513 | 26 | 533 | 5.60E-261 | 909.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79089.t1 | Q12626 | 28.4 | 349 | 201 | 12 | 182 | 489 | 80 | 420 | 1.8e-34 | 148.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79089.t1 | G7J373 | 94.7 | 508 | 27 | 0 | 6 | 513 | 26 | 533 | 4.0e-261 | 909.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055277 | MS.gene79089 | 0.80679 | 6.93E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene79089 | 0.801558 | 8.51E-49 | -1.69E-46 |
| MS.gene060476 | MS.gene79089 | 0.802728 | 4.89E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79089.t1 | MTR_3g086750 | 94.685 | 508 | 27 | 0 | 6 | 513 | 26 | 533 | 0.0 | 1001 |
| MS.gene79089.t1 | MTR_5g062190 | 48.884 | 493 | 241 | 5 | 1 | 485 | 18 | 507 | 8.51e-171 | 492 |
| MS.gene79089.t1 | MTR_5g062290 | 46.640 | 491 | 254 | 3 | 1 | 485 | 17 | 505 | 9.45e-165 | 476 |
| MS.gene79089.t1 | MTR_3g009020 | 48.312 | 474 | 234 | 7 | 16 | 485 | 7 | 473 | 4.74e-157 | 456 |
| MS.gene79089.t1 | MTR_3g009030 | 48.414 | 473 | 235 | 6 | 16 | 485 | 31 | 497 | 8.76e-156 | 453 |
| MS.gene79089.t1 | MTR_8g091310 | 46.201 | 487 | 248 | 8 | 7 | 485 | 26 | 506 | 1.63e-151 | 442 |
| MS.gene79089.t1 | MTR_3g009010 | 46.626 | 489 | 249 | 9 | 1 | 485 | 82 | 562 | 1.17e-150 | 442 |
| MS.gene79089.t1 | MTR_3g008960 | 47.158 | 475 | 240 | 8 | 13 | 485 | 24 | 489 | 2.52e-150 | 439 |
| MS.gene79089.t1 | MTR_5g061980 | 34.043 | 282 | 123 | 7 | 146 | 426 | 87 | 306 | 9.81e-41 | 150 |
| MS.gene79089.t1 | MTR_4g035760 | 44.882 | 127 | 70 | 0 | 359 | 485 | 53 | 179 | 5.88e-35 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 128 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTATGCTCCATTCCATTT+TGG | 0.078300 | 3.2:+74074933 | None:intergenic |
| TTTCCTTTGGTTGGTGTTAT+TGG | 0.089715 | 3.2:-74073549 | MS.gene79089:CDS |
| GATCCTCCAAGTCCATTTAT+TGG | 0.234600 | 3.2:-74075147 | MS.gene79089:CDS |
| CATCTTCATGGGAAACATTC+AGG | 0.242720 | 3.2:-74076662 | MS.gene79089:CDS |
| CAAAGTCTTGATAATCTGTT+AGG | 0.251151 | 3.2:+74073602 | None:intergenic |
| GCTGCTCCCGGTTCCCAAAA+TGG | 0.255158 | 3.2:-74074947 | MS.gene79089:CDS |
| ATATACACTTTGGGACTCTT+TGG | 0.258550 | 3.2:-74073356 | MS.gene79089:CDS |
| AGAGCGCCGAAGATGTTCTT+AGG | 0.277195 | 3.2:-74075814 | MS.gene79089:CDS |
| TGCAAAGCATCCTGCCTTGC+TGG | 0.282128 | 3.2:-74074567 | MS.gene79089:CDS |
| TCAAGACTTCCTCCAATAAA+TGG | 0.284259 | 3.2:+74075135 | None:intergenic |
| AGGATCTACCAACTTAGTTT+TGG | 0.303072 | 3.2:-74074375 | MS.gene79089:CDS |
| AGGAACAACTATCTTCAATT+AGG | 0.303188 | 3.2:-74073481 | MS.gene79089:intron |
| ATCAAACCTTCTTTGTTTGA+TGG | 0.306412 | 3.2:-74077501 | MS.gene79089:CDS |
| CATGGTGGATTTAAAGTTAG+AGG | 0.345081 | 3.2:-74077561 | MS.gene79089:CDS |
| CCACCGTCACATGTAAGAAA+TGG | 0.346802 | 3.2:+74076309 | None:intergenic |
| ACGAATATTTCCGAACGATT+TGG | 0.348623 | 3.2:+74074468 | None:intergenic |
| GTCCATAACCATTTGCTAAC+TGG | 0.355159 | 3.2:+74075840 | None:intergenic |
| TACCAGTTAGCAAATGGTTA+TGG | 0.364366 | 3.2:-74075842 | MS.gene79089:CDS |
| TTGGTAGCCTTGCTTGTAAT+AGG | 0.383961 | 3.2:+74074487 | None:intergenic |
| GGAGGGTGGCTTGTTATTGA+AGG | 0.394104 | 3.2:-74077528 | MS.gene79089:CDS |
| AATTGGCAATGCAGATCCTT+TGG | 0.399729 | 3.2:-74074417 | MS.gene79089:CDS |
| GTCTATAATGCAGTTTCCTT+TGG | 0.400560 | 3.2:-74073562 | MS.gene79089:CDS |
| CTAACAGATTATCAAGACTT+TGG | 0.401986 | 3.2:-74073601 | MS.gene79089:CDS |
| ACAGGGATTCCCCATCTTCA+TGG | 0.411267 | 3.2:-74076674 | MS.gene79089:CDS |
| AAGTCGGGAAGGTCTGTTGC+AGG | 0.412693 | 3.2:-74074276 | MS.gene79089:CDS |
| CACTTTGGGACTCTTTGGAT+TGG | 0.416831 | 3.2:-74073351 | MS.gene79089:CDS |
| CTTCCTCCAATAAATGGACT+TGG | 0.421956 | 3.2:+74075141 | None:intergenic |
| AATGACTTTGAAATGTAATC+TGG | 0.425615 | 3.2:+74074875 | None:intergenic |
| TTTCAATTCCGTACCAATCA+AGG | 0.427838 | 3.2:-74076333 | MS.gene79089:CDS |
| AGTGTATATATTCTGATTGT+TGG | 0.428231 | 3.2:+74073370 | None:intergenic |
| AAGGATAAATACCTGCAGAT+AGG | 0.428937 | 3.2:+74076182 | None:intergenic |
| ATAATGCAGTTTCCTTTGGT+TGG | 0.429534 | 3.2:-74073558 | MS.gene79089:CDS |
| TCTTTGGATTGGCTTTCACC+TGG | 0.431793 | 3.2:-74073340 | MS.gene79089:CDS |
| AATATGTATCTGCAGACAAT+GGG | 0.437341 | 3.2:-74076719 | MS.gene79089:CDS |
| ATAAATGGACTTGGAGGATC+AGG | 0.438577 | 3.2:+74075150 | None:intergenic |
| AAAGTTAGAGGAGTGAACTT+AGG | 0.438588 | 3.2:-74077549 | MS.gene79089:CDS |
| CAATCAGAATATATACACTT+TGG | 0.445062 | 3.2:-74073366 | MS.gene79089:CDS |
| AATCAGAATATATACACTTT+GGG | 0.445440 | 3.2:-74073365 | MS.gene79089:CDS |
| GAAATGTAATCTGGAGAAGT+TGG | 0.451317 | 3.2:+74074884 | None:intergenic |
| CGGGCCATTTGAATTGTTGA+AGG | 0.451769 | 3.2:+74074253 | None:intergenic |
| GGTGGCTTGTTATTGAAGGT+TGG | 0.451992 | 3.2:-74077524 | MS.gene79089:CDS |
| GTTAGAGGAGTGAACTTAGG+AGG | 0.452306 | 3.2:-74077546 | MS.gene79089:CDS |
| TCATCCCACCCTGGTACGCC+TGG | 0.454217 | 3.2:+74075917 | None:intergenic |
| ATTGACCTTCATGCTGCTCC+CGG | 0.455176 | 3.2:-74074959 | MS.gene79089:CDS |
| GAATGAATGTGACAGTTGAC+AGG | 0.461483 | 3.2:-74076692 | MS.gene79089:CDS |
| TTTGAAGTGGAGGGGTTACA+TGG | 0.465385 | 3.2:-74077579 | MS.gene79089:intron |
| CAGGCCTTCAACAATTCAAA+TGG | 0.468996 | 3.2:-74074257 | MS.gene79089:CDS |
| TGTAAGAAATGGGCCTTGAT+TGG | 0.469804 | 3.2:+74076320 | None:intergenic |
| GATCTGCATTGCCAATTCTC+TGG | 0.470111 | 3.2:+74074423 | None:intergenic |
| GCAAAGCATCCTGCCTTGCT+GGG | 0.470714 | 3.2:-74074566 | MS.gene79089:CDS |
| TTCTTTGTTAATATGAGTGC+TGG | 0.472804 | 3.2:-74074323 | MS.gene79089:CDS |
| CTGAATGTTTCCCATGAAGA+TGG | 0.473464 | 3.2:+74076663 | None:intergenic |
| AAAGAAACTGTGCCAGATGA+TGG | 0.474223 | 3.2:+74074524 | None:intergenic |
| GTTCACATCAAGATAAAGAA+TGG | 0.478186 | 3.2:-74076207 | MS.gene79089:CDS |
| CACCGTCACATGTAAGAAAT+GGG | 0.480113 | 3.2:+74076310 | None:intergenic |
| CTTGTTTCTTTGAAGTGGAG+GGG | 0.480230 | 3.2:-74077587 | MS.gene79089:intron |
| CTATCTTTATAGGCTACAAC+TGG | 0.482204 | 3.2:-74075962 | MS.gene79089:intron |
| GTGATAATGTGCCAGAGAAT+TGG | 0.482707 | 3.2:-74074434 | MS.gene79089:CDS |
| AGCAAGGCTACCAAATCGTT+CGG | 0.482834 | 3.2:-74074478 | MS.gene79089:CDS |
| GTTTACCCTAAGAACATCTT+CGG | 0.484369 | 3.2:+74075808 | None:intergenic |
| TCAAATGTCTCAGACGTTGA+AGG | 0.487324 | 3.2:+74076255 | None:intergenic |
| TACAATACATATTCAAAAGT+CGG | 0.488429 | 3.2:-74074292 | MS.gene79089:CDS |
| GGAGATTACCAGTTAGCAAA+TGG | 0.489034 | 3.2:-74075848 | MS.gene79089:CDS |
| AGGATAAATACCTGCAGATA+GGG | 0.489280 | 3.2:+74076183 | None:intergenic |
| TGAGGATACCGGTTGGGTGG+TGG | 0.493251 | 3.2:-74075185 | MS.gene79089:CDS |
| ACAATACATATTCAAAAGTC+GGG | 0.495085 | 3.2:-74074291 | MS.gene79089:CDS |
| CCTCCAATAAATGGACTTGG+AGG | 0.495773 | 3.2:+74075144 | None:intergenic |
| TGAATGTTTCCCATGAAGAT+GGG | 0.498897 | 3.2:+74076664 | None:intergenic |
| ATGCAAATCCAAAACTAAGT+TGG | 0.500518 | 3.2:+74074367 | None:intergenic |
| GTGTATATATTCTGATTGTT+GGG | 0.500854 | 3.2:+74073371 | None:intergenic |
| AGCTCAATTCCCAGCAAGGC+AGG | 0.501113 | 3.2:+74074557 | None:intergenic |
| CAGGAGAGTGGGTGAATGAG+TGG | 0.505279 | 3.2:-74073642 | MS.gene79089:CDS |
| GAGCTTTATCAACCCAACAT+AGG | 0.509849 | 3.2:-74074395 | MS.gene79089:CDS |
| CAGGGATTCCCCATCTTCAT+GGG | 0.509969 | 3.2:-74076673 | MS.gene79089:CDS |
| CAGCTTACAGCAGACTATCC+AGG | 0.511302 | 3.2:-74075935 | MS.gene79089:CDS |
| AAAGCAATCCACCACCCAAC+CGG | 0.513130 | 3.2:+74075177 | None:intergenic |
| ATCTTCATGGGAAACATTCA+GGG | 0.514450 | 3.2:-74076661 | MS.gene79089:intron |
| TACAATTATCATTTCAAATG+TGG | 0.515816 | 3.2:+74075886 | None:intergenic |
| TTGTTTGATGGCATTGCCAA+TGG | 0.517521 | 3.2:-74077489 | MS.gene79089:CDS |
| TTAATTTCCTATTACAAGCA+AGG | 0.520598 | 3.2:-74074494 | MS.gene79089:CDS |
| TTAGAGGAGTGAACTTAGGA+GGG | 0.520834 | 3.2:-74077545 | MS.gene79089:CDS |
| GCAATGCCATCAAACAAAGA+AGG | 0.527389 | 3.2:+74077495 | None:intergenic |
| AATAAATACTGTGAGGATAC+CGG | 0.529307 | 3.2:-74075196 | MS.gene79089:CDS |
| TTTCTTACATGTGACGGTGG+AGG | 0.533853 | 3.2:-74076306 | MS.gene79089:CDS |
| AAGTTGGTAGATCCTATGTT+GGG | 0.535951 | 3.2:+74074383 | None:intergenic |
| GCAGACTATCCAGGCGTACC+AGG | 0.536546 | 3.2:-74075926 | MS.gene79089:CDS |
| TAAGTTGGTAGATCCTATGT+TGG | 0.537533 | 3.2:+74074382 | None:intergenic |
| AAAGTCTTGATAATCTGTTA+GGG | 0.544709 | 3.2:+74073603 | None:intergenic |
| TTCAAATTTCTATATGAACA+TGG | 0.547778 | 3.2:-74075219 | MS.gene79089:CDS |
| CCTCCAAGTCCATTTATTGG+AGG | 0.547901 | 3.2:-74075144 | MS.gene79089:CDS |
| ACTCACAAGCATGTCTCCAT+TGG | 0.548184 | 3.2:+74077473 | None:intergenic |
| GAGCATAGTGCAAGCAGAGA+TGG | 0.549175 | 3.2:-74074920 | MS.gene79089:CDS |
| CTAACTGGTAATCTCCATGT+AGG | 0.553851 | 3.2:+74075855 | None:intergenic |
| ATCTCAAATATCAGGAGAGT+GGG | 0.554315 | 3.2:-74073653 | MS.gene79089:intron |
| GGCCCATTTCTTACATGTGA+CGG | 0.554380 | 3.2:-74076312 | MS.gene79089:CDS |
| GAGCGCCGAAGATGTTCTTA+GGG | 0.556572 | 3.2:-74075813 | MS.gene79089:intron |
| TAACAAAGAATGTGTCAAAG+AGG | 0.561592 | 3.2:+74074336 | None:intergenic |
| AAATATGTATCTGCAGACAA+TGG | 0.568845 | 3.2:-74076720 | MS.gene79089:CDS |
| AAAGAATGGACCCTATCTGC+AGG | 0.569019 | 3.2:-74076193 | MS.gene79089:intron |
| ATACTGTGAGGATACCGGTT+GGG | 0.576799 | 3.2:-74075191 | MS.gene79089:CDS |
| TTGGGTTGATAAAGCTCCAA+AGG | 0.582698 | 3.2:+74074401 | None:intergenic |
| TACATATTCAAAAGTCGGGA+AGG | 0.586562 | 3.2:-74074287 | MS.gene79089:CDS |
| AATCTCAAATATCAGGAGAG+TGG | 0.589980 | 3.2:-74073654 | MS.gene79089:intron |
| CTATCCAGGCGTACCAGGGT+GGG | 0.591770 | 3.2:-74075921 | MS.gene79089:CDS |
| CAAAAGCTCAATTCCCAGCA+AGG | 0.598883 | 3.2:+74074553 | None:intergenic |
| ATTGTATCTAATAACCTACA+TGG | 0.601786 | 3.2:-74075869 | MS.gene79089:CDS |
| GGGAACCGGGAGCAGCATGA+AGG | 0.601896 | 3.2:+74074954 | None:intergenic |
| TCCCGGTTCCCAAAATGGAA+TGG | 0.613131 | 3.2:-74074942 | MS.gene79089:CDS |
| AAATAGCTATATTACAGTAG+AGG | 0.615992 | 3.2:-74075244 | MS.gene79089:CDS |
| GAGGAGTGAACTTAGGAGGG+TGG | 0.625009 | 3.2:-74077542 | MS.gene79089:CDS |
| GAAATGGGCCTTGATTGGTA+CGG | 0.632108 | 3.2:+74076325 | None:intergenic |
| CTGTGAGGATACCGGTTGGG+TGG | 0.633143 | 3.2:-74075188 | MS.gene79089:CDS |
| GAATGTTTCCCATGAAGATG+GGG | 0.636416 | 3.2:+74076665 | None:intergenic |
| AGGAGAGTGGGTGAATGAGT+GGG | 0.637824 | 3.2:-74073641 | MS.gene79089:CDS |
| GAAGTGGAGGGGTTACATGG+TGG | 0.650799 | 3.2:-74077576 | MS.gene79089:intron |
| AATACTGTGAGGATACCGGT+TGG | 0.651527 | 3.2:-74075192 | MS.gene79089:CDS |
| ACTATCCAGGCGTACCAGGG+TGG | 0.651751 | 3.2:-74075922 | MS.gene79089:CDS |
| AGATTATCAAGACTTTGGAA+AGG | 0.657543 | 3.2:-74073596 | MS.gene79089:CDS |
| AAAGTAAACAAGACAAAACC+AGG | 0.661016 | 3.2:+74073322 | None:intergenic |
| CAGACTATCCAGGCGTACCA+GGG | 0.663790 | 3.2:-74075925 | MS.gene79089:CDS |
| AATGAATGTGACAGTTGACA+GGG | 0.671114 | 3.2:-74076691 | MS.gene79089:CDS |
| AGTCCAATAACACCAACCAA+AGG | 0.673079 | 3.2:+74073546 | None:intergenic |
| TATGTATCTGCAGACAATGG+GGG | 0.679750 | 3.2:-74076717 | MS.gene79089:CDS |
| ATATGTATCTGCAGACAATG+GGG | 0.684552 | 3.2:-74076718 | MS.gene79089:CDS |
| AACATGGAATAAATACTGTG+AGG | 0.697922 | 3.2:-74075203 | MS.gene79089:CDS |
| GCTGAATTATCATCCCACCC+TGG | 0.707594 | 3.2:+74075908 | None:intergenic |
| CCATTTCTTACATGTGACGG+TGG | 0.710780 | 3.2:-74076309 | MS.gene79089:CDS |
| AATGAGTGGGATGTGACAAG+CGG | 0.726351 | 3.2:-74073628 | MS.gene79089:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTGAATTTTTAATTTCT+AGG | - | chr3.2:74076131-74076150 | MS.gene79089:intron | 10.0% |
| !! | ATAAATCAATACAAATAAGT+TGG | + | chr3.2:74075608-74075627 | None:intergenic | 15.0% |
| !! | ATTTGAGTAAATATTAAATG+TGG | - | chr3.2:74073572-74073591 | MS.gene79089:CDS | 15.0% |
| !!! | TTGTTTTTCAATATTATGTA+TGG | + | chr3.2:74075656-74075675 | None:intergenic | 15.0% |
| !! | AAATGAAACAAATGAGATAT+TGG | + | chr3.2:74073354-74073373 | None:intergenic | 20.0% |
| !! | AATCAGAATATATACACTTT+GGG | - | chr3.2:74077613-74077632 | MS.gene79089:intron | 20.0% |
| !! | ATGATATATGTACAAAATGT+AGG | - | chr3.2:74074197-74074216 | MS.gene79089:intron | 20.0% |
| !! | ATTTGATACATGATTGAAAA+CGG | - | chr3.2:74077280-74077299 | MS.gene79089:intron | 20.0% |
| !! | TACAATACATATTCAAAAGT+CGG | - | chr3.2:74076686-74076705 | MS.gene79089:CDS | 20.0% |
| !! | TACAATTATCATTTCAAATG+TGG | + | chr3.2:74075095-74075114 | None:intergenic | 20.0% |
| !! | TTCAAATTTCTATATGAACA+TGG | - | chr3.2:74075759-74075778 | MS.gene79089:intron | 20.0% |
| !! | TTGTAGAAGTTCTTATTATT+GGG | - | chr3.2:74076179-74076198 | MS.gene79089:intron | 20.0% |
| !! | TTTGTAGAAGTTCTTATTAT+TGG | - | chr3.2:74076178-74076197 | MS.gene79089:intron | 20.0% |
| !!! | AAACAGCATTACATTTTTTA+TGG | + | chr3.2:74074854-74074873 | None:intergenic | 20.0% |
| !!! | GATTTGATTTTTTCAGATTA+AGG | - | chr3.2:74074402-74074421 | MS.gene79089:CDS | 20.0% |
| !!! | TTAAAAGTCTAAGATCAATA+TGG | + | chr3.2:74074971-74074990 | None:intergenic | 20.0% |
| !!! | TTTAATTTCTAGGTATGTTT+TGG | - | chr3.2:74076141-74076160 | MS.gene79089:intron | 20.0% |
| ! | AAATAGCTATATTACAGTAG+AGG | - | chr3.2:74075734-74075753 | MS.gene79089:intron | 25.0% |
| ! | AACCATTTGAAAAGATTTAG+AGG | - | chr3.2:74073910-74073929 | MS.gene79089:intron | 25.0% |
| ! | AATAAGATGAAAACAACTTG+TGG | - | chr3.2:74075460-74075479 | MS.gene79089:intron | 25.0% |
| ! | AATTGATATTCTTGAGTACA+TGG | + | chr3.2:74076215-74076234 | None:intergenic | 25.0% |
| ! | ACAATACATATTCAAAAGTC+GGG | - | chr3.2:74076687-74076706 | MS.gene79089:CDS | 25.0% |
| ! | ACTAACAGAAGATACATTTA+GGG | - | chr3.2:74074080-74074099 | MS.gene79089:intron | 25.0% |
| ! | ACTCAAGAATATCAATTAGA+GGG | - | chr3.2:74076218-74076237 | MS.gene79089:CDS | 25.0% |
| ! | AGTGTATATATTCTGATTGT+TGG | + | chr3.2:74077611-74077630 | None:intergenic | 25.0% |
| ! | ATATGTACAAAATGTAGGAT+GGG | - | chr3.2:74074202-74074221 | MS.gene79089:intron | 25.0% |
| ! | ATGACTATCACATTGAAAAT+CGG | - | chr3.2:74075276-74075295 | MS.gene79089:intron | 25.0% |
| ! | ATTGATATTCTTGAGTACAT+GGG | + | chr3.2:74076214-74076233 | None:intergenic | 25.0% |
| ! | ATTGTATCTAATAACCTACA+TGG | - | chr3.2:74075109-74075128 | MS.gene79089:CDS | 25.0% |
| ! | CAATCAGAATATATACACTT+TGG | - | chr3.2:74077612-74077631 | MS.gene79089:intron | 25.0% |
| ! | CAATTTGAATCTCAAATATC+AGG | - | chr3.2:74077317-74077336 | MS.gene79089:intron | 25.0% |
| ! | CTTATAACTTACTGAAAAGA+CGG | + | chr3.2:74075338-74075357 | None:intergenic | 25.0% |
| ! | GTCTTACCAATAAAAATTAG+CGG | + | chr3.2:74076748-74076767 | None:intergenic | 25.0% |
| ! | GTGTATATATTCTGATTGTT+GGG | + | chr3.2:74077610-74077629 | None:intergenic | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | + | chr3.2:74073950-74073969 | None:intergenic | 25.0% |
| ! | TAAGCGTAATGAGAAAAATA+AGG | - | chr3.2:74074749-74074768 | MS.gene79089:intron | 25.0% |
| ! | TACTAACAGAAGATACATTT+AGG | - | chr3.2:74074079-74074098 | MS.gene79089:intron | 25.0% |
| ! | TACTCAAGAATATCAATTAG+AGG | - | chr3.2:74076217-74076236 | MS.gene79089:CDS | 25.0% |
| ! | TATATGTACAAAATGTAGGA+TGG | - | chr3.2:74074201-74074220 | MS.gene79089:intron | 25.0% |
| ! | TCTTACCAATAAAAATTAGC+GGG | + | chr3.2:74076747-74076766 | None:intergenic | 25.0% |
| ! | TTAATTTCCTATTACAAGCA+AGG | - | chr3.2:74076484-74076503 | MS.gene79089:intron | 25.0% |
| ! | TTCAGATAATTATGCATTCA+AGG | + | chr3.2:74076846-74076865 | None:intergenic | 25.0% |
| !! | AAAGTCTTGATAATCTGTTA+GGG | + | chr3.2:74077378-74077397 | None:intergenic | 25.0% |
| !! | AATCAATACAAATAAGTTGG+AGG | + | chr3.2:74075605-74075624 | None:intergenic | 25.0% |
| !! | ATCAGACCATTTTCAATTTA+TGG | + | chr3.2:74076919-74076938 | None:intergenic | 25.0% |
| !! | ATTGGACTTTAAAAAATGAC+AGG | - | chr3.2:74077447-74077466 | MS.gene79089:intron | 25.0% |
| !! | TATATGAAGTTGCTTTACTA+TGG | - | chr3.2:74074941-74074960 | MS.gene79089:CDS | 25.0% |
| !! | TCTAGATAATGCATTTTCAT+GGG | - | chr3.2:74075869-74075888 | MS.gene79089:CDS | 25.0% |
| !! | TTCAGAAATTCAACTGATTT+AGG | + | chr3.2:74074489-74074508 | None:intergenic | 25.0% |
| !! | TTGGACTTTAAAAAATGACA+GGG | - | chr3.2:74077448-74077467 | MS.gene79089:intron | 25.0% |
| !! | TTTTCAAATGGTTTCTCTAA+TGG | + | chr3.2:74073903-74073922 | None:intergenic | 25.0% |
| !!! | AAACTTCTTTTTTCCTTTTG+AGG | - | chr3.2:74075949-74075968 | MS.gene79089:CDS | 25.0% |
| !!! | AATGACTTTGAAATGTAATC+TGG | + | chr3.2:74076106-74076125 | None:intergenic | 25.0% |
| !!! | AATTACATGTTTGATTTTGC+AGG | - | chr3.2:74077577-74077596 | MS.gene79089:intron | 25.0% |
| !!! | ATTACATGTTTGATTTTGCA+GGG | - | chr3.2:74077578-74077597 | MS.gene79089:intron | 25.0% |
| !!! | GTGTTTTTTGTTAGTCAATT+TGG | - | chr3.2:74073664-74073683 | MS.gene79089:intron | 25.0% |
| !!! | TACATGTTTTCTGGTTAATT+TGG | - | chr3.2:74073693-74073712 | MS.gene79089:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr3.2:74073768-74073787 | MS.gene79089:intron | 25.0% |
| AAAGTAAACAAGACAAAACC+AGG | + | chr3.2:74077659-74077678 | None:intergenic | 30.0% | |
| AAATATGTATCTGCAGACAA+TGG | - | chr3.2:74074258-74074277 | MS.gene79089:CDS | 30.0% | |
| AACATGGAATAAATACTGTG+AGG | - | chr3.2:74075775-74075794 | MS.gene79089:intron | 30.0% | |
| AAGTATCTTGCTGAAAATTG+AGG | + | chr3.2:74073548-74073567 | None:intergenic | 30.0% | |
| AAGTGGCCATAAATTGAAAA+TGG | - | chr3.2:74076910-74076929 | MS.gene79089:intron | 30.0% | |
| AATAAATACTGTGAGGATAC+CGG | - | chr3.2:74075782-74075801 | MS.gene79089:intron | 30.0% | |
| AATATGTATCTGCAGACAAT+GGG | - | chr3.2:74074259-74074278 | MS.gene79089:CDS | 30.0% | |
| AATTAAGCACATTCCTCAAA+AGG | + | chr3.2:74075965-74075984 | None:intergenic | 30.0% | |
| ACACAACAATCTGTAACTAT+TGG | + | chr3.2:74077022-74077041 | None:intergenic | 30.0% | |
| AGAAAACGGAACAATTAACT+AGG | + | chr3.2:74075696-74075715 | None:intergenic | 30.0% | |
| AGAACCTATAGTAGAAAAGT+TGG | - | chr3.2:74073757-74073776 | MS.gene79089:intron | 30.0% | |
| AGGAACAACTATCTTCAATT+AGG | - | chr3.2:74077497-74077516 | MS.gene79089:CDS | 30.0% | |
| AGTATCTTGCTGAAAATTGA+GGG | + | chr3.2:74073547-74073566 | None:intergenic | 30.0% | |
| ATCACAAAGTCTATTCTGTA+AGG | + | chr3.2:74076382-74076401 | None:intergenic | 30.0% | |
| ATCACATTGAAAATCGGTAA+AGG | - | chr3.2:74075282-74075301 | MS.gene79089:intron | 30.0% | |
| ATGCAAATCCAAAACTAAGT+TGG | + | chr3.2:74076614-74076633 | None:intergenic | 30.0% | |
| CAAAGTGACAAAAAAACAGT+TGG | + | chr3.2:74077136-74077155 | None:intergenic | 30.0% | |
| CAACTATCTTCAATTAGGTA+AGG | - | chr3.2:74077502-74077521 | MS.gene79089:CDS | 30.0% | |
| CTAACAGATTATCAAGACTT+TGG | - | chr3.2:74077377-74077396 | MS.gene79089:intron | 30.0% | |
| GAAGTAAACAGACAAATTTG+TGG | + | chr3.2:74075583-74075602 | None:intergenic | 30.0% | |
| GACTAACAAAAAACACATTC+AGG | + | chr3.2:74073660-74073679 | None:intergenic | 30.0% | |
| GATTTATAGAGAGACTAACA+TGG | + | chr3.2:74074889-74074908 | None:intergenic | 30.0% | |
| GCTTATACCACTATCTTTAT+AGG | - | chr3.2:74075006-74075025 | MS.gene79089:intron | 30.0% | |
| GTTATCTACTGTCACAATTA+AGG | - | chr3.2:74075222-74075241 | MS.gene79089:CDS | 30.0% | |
| GTTCACATCAAGATAAAGAA+TGG | - | chr3.2:74074771-74074790 | MS.gene79089:intron | 30.0% | |
| TAACAAAGAATGTGTCAAAG+AGG | + | chr3.2:74076645-74076664 | None:intergenic | 30.0% | |
| TAGTGTCAAACAAAACTGAA+AGG | + | chr3.2:74076777-74076796 | None:intergenic | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | - | chr3.2:74073835-74073854 | MS.gene79089:intron | 30.0% | |
| TTAACCAGAAAACATGTAAG+AGG | + | chr3.2:74073691-74073710 | None:intergenic | 30.0% | |
| TTAGGTAAGGACTATAGATT+TGG | - | chr3.2:74077515-74077534 | MS.gene79089:CDS | 30.0% | |
| TTATCATCCAGGGTTTATTA+CGG | - | chr3.2:74075918-74075937 | MS.gene79089:CDS | 30.0% | |
| TTCTCTGTATTTATCATCCA+GGG | - | chr3.2:74075908-74075927 | MS.gene79089:CDS | 30.0% | |
| TTCTTTGTTAATATGAGTGC+TGG | - | chr3.2:74076655-74076674 | MS.gene79089:intron | 30.0% | |
| TTGATCTACTCTTCTTACAA+CGG | + | chr3.2:74073834-74073853 | None:intergenic | 30.0% | |
| TTTCTCTGTATTTATCATCC+AGG | - | chr3.2:74075907-74075926 | MS.gene79089:CDS | 30.0% | |
| ! | AGATTATCAAGACTTTGGAA+AGG | - | chr3.2:74077382-74077401 | MS.gene79089:intron | 30.0% |
| ! | ATCAAACCTTCTTTGTTTGA+TGG | - | chr3.2:74073477-74073496 | MS.gene79089:intron | 30.0% |
| ! | CAAAGTCTTGATAATCTGTT+AGG | + | chr3.2:74077379-74077398 | None:intergenic | 30.0% |
| ! | CTCTAGATAATGCATTTTCA+TGG | - | chr3.2:74075868-74075887 | MS.gene79089:CDS | 30.0% |
| ! | GACCTCTAAATCTTTTCAAA+TGG | + | chr3.2:74073915-74073934 | None:intergenic | 30.0% |
| ! | GGTTTATTTGAGTTTACCTA+CGG | + | chr3.2:74075542-74075561 | None:intergenic | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | + | chr3.2:74073893-74073912 | None:intergenic | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr3.2:74073764-74073783 | None:intergenic | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | chr3.2:74073954-74073973 | MS.gene79089:intron | 30.0% |
| ! | TGTTTTTCTTCTCCTTAAAG+TGG | - | chr3.2:74076893-74076912 | MS.gene79089:intron | 30.0% |
| ! | TTCAATTTATGGCCACTTTA+AGG | + | chr3.2:74076908-74076927 | None:intergenic | 30.0% |
| ! | TTGTTCTTGTTTCTTTGAAG+TGG | - | chr3.2:74073386-74073405 | MS.gene79089:intron | 30.0% |
| !! | GAATGTGCTTTTTATTTGAG+AGG | - | chr3.2:74077087-74077106 | MS.gene79089:intron | 30.0% |
| !! | GATTTTCATGAAGTTGATTG+AGG | + | chr3.2:74076824-74076843 | None:intergenic | 30.0% |
| AAAGTTAGAGGAGTGAACTT+AGG | - | chr3.2:74073429-74073448 | MS.gene79089:intron | 35.0% | |
| AAATGGTCTGATTTCAGACA+TGG | - | chr3.2:74076927-74076946 | MS.gene79089:intron | 35.0% | |
| AACAGTATCTAATGACACAC+AGG | - | chr3.2:74076956-74076975 | MS.gene79089:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr3.2:74073838-74073857 | MS.gene79089:intron | 35.0% | |
| AAGCACTTGTGAGACTATTT+GGG | + | chr3.2:74075515-74075534 | None:intergenic | 35.0% | |
| AAGCTATACTGGAGAGTTTA+TGG | - | chr3.2:74075436-74075455 | MS.gene79089:intron | 35.0% | |
| AAGGATAAATACCTGCAGAT+AGG | + | chr3.2:74074799-74074818 | None:intergenic | 35.0% | |
| AATCTCAAATATCAGGAGAG+TGG | - | chr3.2:74077324-74077343 | MS.gene79089:intron | 35.0% | |
| AATGAATGTGACAGTTGACA+GGG | - | chr3.2:74074287-74074306 | MS.gene79089:CDS | 35.0% | |
| ACGAATATTTCCGAACGATT+TGG | + | chr3.2:74076513-74076532 | None:intergenic | 35.0% | |
| AGACAAATTTGTGGAGACTT+AGG | + | chr3.2:74075574-74075593 | None:intergenic | 35.0% | |
| AGACTATTTGGGAAAGCTTA+TGG | + | chr3.2:74075504-74075523 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr3.2:74073922-74073941 | MS.gene79089:intron | 35.0% | |
| AGGATAAATACCTGCAGATA+GGG | + | chr3.2:74074798-74074817 | None:intergenic | 35.0% | |
| ATAATGCAGTTTCCTTTGGT+TGG | - | chr3.2:74077420-74077439 | MS.gene79089:intron | 35.0% | |
| ATATGTATCTGCAGACAATG+GGG | - | chr3.2:74074260-74074279 | MS.gene79089:CDS | 35.0% | |
| ATCGTAGCAACATATAATGC+TGG | + | chr3.2:74074385-74074404 | None:intergenic | 35.0% | |
| ATCTCAAATATCAGGAGAGT+GGG | - | chr3.2:74077325-74077344 | MS.gene79089:intron | 35.0% | |
| ATCTTCATGGGAAACATTCA+GGG | - | chr3.2:74074317-74074336 | MS.gene79089:CDS | 35.0% | |
| CCAATTTAGCAGAAAGCAAA+AGG | + | chr3.2:74074818-74074837 | None:intergenic | 35.0% | |
| CTATCTTTATAGGCTACAAC+TGG | - | chr3.2:74075016-74075035 | MS.gene79089:intron | 35.0% | |
| CTTACTTTCAAAAACTCTCC+AGG | + | chr3.2:74075377-74075396 | None:intergenic | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr3.2:74073782-74073801 | MS.gene79089:intron | 35.0% | |
| GAAATGTAATCTGGAGAAGT+TGG | + | chr3.2:74076097-74076116 | None:intergenic | 35.0% | |
| GACAAATTTGTGGAGACTTA+GGG | + | chr3.2:74075573-74075592 | None:intergenic | 35.0% | |
| GTCTATAATGCAGTTTCCTT+TGG | - | chr3.2:74077416-74077435 | MS.gene79089:intron | 35.0% | |
| GTTGTAGCCTATAAAGATAG+TGG | + | chr3.2:74075016-74075035 | None:intergenic | 35.0% | |
| GTTTACCCTAAGAACATCTT+CGG | + | chr3.2:74075173-74075192 | None:intergenic | 35.0% | |
| TAAGCACTTGTGAGACTATT+TGG | + | chr3.2:74075516-74075535 | None:intergenic | 35.0% | |
| TACATATTCAAAAGTCGGGA+AGG | - | chr3.2:74076691-74076710 | MS.gene79089:CDS | 35.0% | |
| TACCAGTTAGCAAATGGTTA+TGG | - | chr3.2:74075136-74075155 | MS.gene79089:CDS | 35.0% | |
| TAGGTATGAAACCGTGAAAT+GGG | + | chr3.2:74074470-74074489 | None:intergenic | 35.0% | |
| TCAAGACTTCCTCCAATAAA+TGG | + | chr3.2:74075846-74075865 | None:intergenic | 35.0% | |
| TGAATGTTTCCCATGAAGAT+GGG | + | chr3.2:74074317-74074336 | None:intergenic | 35.0% | |
| TGCTTACTTTACCCATTTCA+CGG | - | chr3.2:74074456-74074475 | MS.gene79089:CDS | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr3.2:74073777-74073796 | MS.gene79089:intron | 35.0% | |
| TTAGGTATGAAACCGTGAAA+TGG | + | chr3.2:74074471-74074490 | None:intergenic | 35.0% | |
| TTATAGAGAGACTAACATGG+TGG | + | chr3.2:74074886-74074905 | None:intergenic | 35.0% | |
| TTCGTGCACAAATTGACTAA+GGG | + | chr3.2:74074057-74074076 | None:intergenic | 35.0% | |
| TTTCAATTCCGTACCAATCA+AGG | - | chr3.2:74074645-74074664 | MS.gene79089:intron | 35.0% | |
| TTTCGTGCACAAATTGACTA+AGG | + | chr3.2:74074058-74074077 | None:intergenic | 35.0% | |
| ! | AATGGCCCGCTAATTTTTAT+TGG | - | chr3.2:74076739-74076758 | MS.gene79089:CDS | 35.0% |
| ! | ACTATGCTCCATTCCATTTT+GGG | + | chr3.2:74076047-74076066 | None:intergenic | 35.0% |
| ! | AGGATCTACCAACTTAGTTT+TGG | - | chr3.2:74076603-74076622 | MS.gene79089:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr3.2:74073934-74073953 | MS.gene79089:intron | 35.0% |
| ! | CCTTTTGCTTTCTGCTAAAT+TGG | - | chr3.2:74074815-74074834 | MS.gene79089:intron | 35.0% |
| ! | CTTTTGAATGAACCATCATC+TGG | - | chr3.2:74076442-74076461 | MS.gene79089:intron | 35.0% |
| ! | GGGATTTTGAATGGAACATT+AGG | - | chr3.2:74077477-74077496 | MS.gene79089:intron | 35.0% |
| ! | TGGGACTAAATTGACTTATC+TGG | - | chr3.2:74074159-74074178 | MS.gene79089:intron | 35.0% |
| ! | TGTCACAATTAAGGCTTGTT+AGG | - | chr3.2:74075231-74075250 | MS.gene79089:CDS | 35.0% |
| !! | AAGTTGGTAGATCCTATGTT+GGG | + | chr3.2:74076598-74076617 | None:intergenic | 35.0% |
| !! | AGCTGTTTTCAAAACAATCC+TGG | - | chr3.2:74075356-74075375 | MS.gene79089:intron | 35.0% |
| !! | ATATACACTTTGGGACTCTT+TGG | - | chr3.2:74077622-74077641 | MS.gene79089:intron | 35.0% |
| !! | CATGGTGGATTTAAAGTTAG+AGG | - | chr3.2:74073417-74073436 | MS.gene79089:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTATAC+TGG | - | chr3.2:74075425-74075444 | MS.gene79089:intron | 35.0% |
| !! | TAAGTTGGTAGATCCTATGT+TGG | + | chr3.2:74076599-74076618 | None:intergenic | 35.0% |
| !! | TCTTGTTTCTTTGAAGTGGA+GGG | - | chr3.2:74073390-74073409 | MS.gene79089:intron | 35.0% |
| !! | TTCTTGTTTCTTTGAAGTGG+AGG | - | chr3.2:74073389-74073408 | MS.gene79089:intron | 35.0% |
| !! | TTTCCTTTGGTTGGTGTTAT+TGG | - | chr3.2:74077429-74077448 | MS.gene79089:intron | 35.0% |
| AAAGAAACTGTGCCAGATGA+TGG | + | chr3.2:74076457-74076476 | None:intergenic | 40.0% | |
| AATTGGCAATGCAGATCCTT+TGG | - | chr3.2:74076561-74076580 | MS.gene79089:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr3.2:74073863-74073882 | MS.gene79089:intron | 40.0% | |
| AGTCCAATAACACCAACCAA+AGG | + | chr3.2:74077435-74077454 | None:intergenic | 40.0% | |
| CACCGTCACATGTAAGAAAT+GGG | + | chr3.2:74074671-74074690 | None:intergenic | 40.0% | |
| CAGGCCTTCAACAATTCAAA+TGG | - | chr3.2:74076721-74076740 | MS.gene79089:CDS | 40.0% | |
| CATCTTCATGGGAAACATTC+AGG | - | chr3.2:74074316-74074335 | MS.gene79089:CDS | 40.0% | |
| CTAACTGGTAATCTCCATGT+AGG | + | chr3.2:74075126-74075145 | None:intergenic | 40.0% | |
| CTATTCTGTAAGGTCGACAA+AGG | + | chr3.2:74076372-74076391 | None:intergenic | 40.0% | |
| CTGAATGTTTCCCATGAAGA+TGG | + | chr3.2:74074318-74074337 | None:intergenic | 40.0% | |
| GAAATGGGTAAAGTAAGCAC+AGG | + | chr3.2:74074455-74074474 | None:intergenic | 40.0% | |
| GAATGAATGTGACAGTTGAC+AGG | - | chr3.2:74074286-74074305 | MS.gene79089:CDS | 40.0% | |
| GAATGTTTCCCATGAAGATG+GGG | + | chr3.2:74074316-74074335 | None:intergenic | 40.0% | |
| GATCCTCCAAGTCCATTTAT+TGG | - | chr3.2:74075831-74075850 | MS.gene79089:CDS | 40.0% | |
| GCAATGCCATCAAACAAAGA+AGG | + | chr3.2:74073486-74073505 | None:intergenic | 40.0% | |
| GGAGATTACCAGTTAGCAAA+TGG | - | chr3.2:74075130-74075149 | MS.gene79089:CDS | 40.0% | |
| GGTAAAGTAAGCACAGGAAA+TGG | + | chr3.2:74074449-74074468 | None:intergenic | 40.0% | |
| GGTAAGGACTATAGATTTGG+TGG | - | chr3.2:74077518-74077537 | MS.gene79089:CDS | 40.0% | |
| GTCTCTGCAGTTACAGAAAA+CGG | + | chr3.2:74075710-74075729 | None:intergenic | 40.0% | |
| TATGTATCTGCAGACAATGG+GGG | - | chr3.2:74074261-74074280 | MS.gene79089:CDS | 40.0% | |
| TCAAATGTCTCAGACGTTGA+AGG | + | chr3.2:74074726-74074745 | None:intergenic | 40.0% | |
| TCCCTTAGAAAAGAGTGAGT+GGG | - | chr3.2:74073731-74073750 | MS.gene79089:intron | 40.0% | |
| TCTTCTTACAACGGCATCTA+CGG | + | chr3.2:74073825-74073844 | None:intergenic | 40.0% | |
| TGTAAGAAATGGGCCTTGAT+TGG | + | chr3.2:74074661-74074680 | None:intergenic | 40.0% | |
| TTAGAGGAGTGAACTTAGGA+GGG | - | chr3.2:74073433-74073452 | MS.gene79089:intron | 40.0% | |
| TTCCCTTAGAAAAGAGTGAG+TGG | - | chr3.2:74073730-74073749 | MS.gene79089:intron | 40.0% | |
| ! | AGTCATTTCAAGTCGTGTCT+CGG | - | chr3.2:74076979-74076998 | MS.gene79089:intron | 40.0% |
| ! | ATAAATGGACTTGGAGGATC+AGG | + | chr3.2:74075831-74075850 | None:intergenic | 40.0% |
| ! | CACTATGCTCCATTCCATTT+TGG | + | chr3.2:74076048-74076067 | None:intergenic | 40.0% |
| ! | CTTCCTCCAATAAATGGACT+TGG | + | chr3.2:74075840-74075859 | None:intergenic | 40.0% |
| ! | GAGCTTTATCAACCCAACAT+AGG | - | chr3.2:74076583-74076602 | MS.gene79089:intron | 40.0% |
| ! | GTCCATAACCATTTGCTAAC+TGG | + | chr3.2:74075141-74075160 | None:intergenic | 40.0% |
| ! | GTGATAATGTGCCAGAGAAT+TGG | - | chr3.2:74076544-74076563 | MS.gene79089:intron | 40.0% |
| ! | TAAAAAATGACAGGGAGCAC+TGG | - | chr3.2:74077456-74077475 | MS.gene79089:intron | 40.0% |
| ! | TGGTCCTCTTACATGTTTTC+TGG | - | chr3.2:74073684-74073703 | MS.gene79089:intron | 40.0% |
| ! | TTGGTAGCCTTGCTTGTAAT+AGG | + | chr3.2:74076494-74076513 | None:intergenic | 40.0% |
| ! | TTGTTTGATGGCATTGCCAA+TGG | - | chr3.2:74073489-74073508 | MS.gene79089:CDS | 40.0% |
| !! | AAAAAATGACAGGGAGCACT+GGG | - | chr3.2:74077457-74077476 | MS.gene79089:intron | 40.0% |
| !! | CTTGTTTCTTTGAAGTGGAG+GGG | - | chr3.2:74073391-74073410 | MS.gene79089:intron | 40.0% |
| !! | GGTGGTGTCATTATAATCTC+TGG | + | chr3.2:74074129-74074148 | None:intergenic | 40.0% |
| !! | TTGGGTTGATAAAGCTCCAA+AGG | + | chr3.2:74076580-74076599 | None:intergenic | 40.0% |
| AAAGAATGGACCCTATCTGC+AGG | - | chr3.2:74074785-74074804 | MS.gene79089:intron | 45.0% | |
| AATACTGTGAGGATACCGGT+TGG | - | chr3.2:74075786-74075805 | MS.gene79089:intron | 45.0% | |
| AATGAGTGGGATGTGACAAG+CGG | - | chr3.2:74077350-74077369 | MS.gene79089:intron | 45.0% | |
| ACTCACAAGCATGTCTCCAT+TGG | + | chr3.2:74073508-74073527 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr3.2:74073847-74073866 | MS.gene79089:intron | 45.0% | |
| AGCAAGGCTACCAAATCGTT+CGG | - | chr3.2:74076500-74076519 | MS.gene79089:intron | 45.0% | |
| AGTTGTGCCGTAATAAACCC+TGG | + | chr3.2:74075928-74075947 | None:intergenic | 45.0% | |
| ATACTCTCCACAACTGCAAC+AGG | + | chr3.2:74074614-74074633 | None:intergenic | 45.0% | |
| ATTTGTGGAGACTTAGGGCT+TGG | + | chr3.2:74075568-74075587 | None:intergenic | 45.0% | |
| CAAAAGCTCAATTCCCAGCA+AGG | + | chr3.2:74076428-74076447 | None:intergenic | 45.0% | |
| CCACAACTGCAACAGGAAAA+AGG | + | chr3.2:74074607-74074626 | None:intergenic | 45.0% | |
| CCACCGTCACATGTAAGAAA+TGG | + | chr3.2:74074672-74074691 | None:intergenic | 45.0% | |
| CCATTTCTTACATGTGACGG+TGG | - | chr3.2:74074669-74074688 | MS.gene79089:intron | 45.0% | |
| CCCTTAGAAAAGAGTGAGTG+GGG | - | chr3.2:74073732-74073751 | MS.gene79089:intron | 45.0% | |
| CCTCCAAGTCCATTTATTGG+AGG | - | chr3.2:74075834-74075853 | MS.gene79089:CDS | 45.0% | |
| CCTTAGAAAAGAGTGAGTGG+GGG | - | chr3.2:74073733-74073752 | MS.gene79089:intron | 45.0% | |
| CGGGCCATTTGAATTGTTGA+AGG | + | chr3.2:74076728-74076747 | None:intergenic | 45.0% | |
| CTTCTTACAACGGCATCTAC+GGG | + | chr3.2:74073824-74073843 | None:intergenic | 45.0% | |
| GAAATGGGCCTTGATTGGTA+CGG | + | chr3.2:74074656-74074675 | None:intergenic | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr3.2:74073857-74073876 | MS.gene79089:intron | 45.0% | |
| GATCTGCATTGCCAATTCTC+TGG | + | chr3.2:74076558-74076577 | None:intergenic | 45.0% | |
| GGCCCATTTCTTACATGTGA+CGG | - | chr3.2:74074666-74074685 | MS.gene79089:intron | 45.0% | |
| GTTAGAGGAGTGAACTTAGG+AGG | - | chr3.2:74073432-74073451 | MS.gene79089:intron | 45.0% | |
| TCACAAGTGCTTATGTCCGT+AGG | - | chr3.2:74075523-74075542 | MS.gene79089:intron | 45.0% | |
| TTTCTTACATGTGACGGTGG+AGG | - | chr3.2:74074672-74074691 | MS.gene79089:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr3.2:74074003-74074022 | None:intergenic | 45.0% |
| ! | ATACTGTGAGGATACCGGTT+GGG | - | chr3.2:74075787-74075806 | MS.gene79089:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr3.2:74074004-74074023 | None:intergenic | 45.0% |
| ! | CCCCACTCACTCTTTTCTAA+GGG | + | chr3.2:74073735-74073754 | None:intergenic | 45.0% |
| ! | CCTCCAATAAATGGACTTGG+AGG | + | chr3.2:74075837-74075856 | None:intergenic | 45.0% |
| ! | CCTTTTTCCTGTTGCAGTTG+TGG | - | chr3.2:74074604-74074623 | MS.gene79089:intron | 45.0% |
| ! | TGCATTTTCATGGGCACAGT+AGG | - | chr3.2:74075878-74075897 | MS.gene79089:CDS | 45.0% |
| ! | TGGTTTGGACATGTAGAGAG+AGG | - | chr3.2:74073797-74073816 | MS.gene79089:intron | 45.0% |
| ! | TTTGAAGTGGAGGGGTTACA+TGG | - | chr3.2:74073399-74073418 | MS.gene79089:intron | 45.0% |
| !! | CACTTTGGGACTCTTTGGAT+TGG | - | chr3.2:74077627-74077646 | MS.gene79089:intron | 45.0% |
| !! | CTCCATTCCATTTTGGGAAC+CGG | + | chr3.2:74076041-74076060 | None:intergenic | 45.0% |
| !! | GCAAGCAGAGATGGTTTTAC+AGG | - | chr3.2:74076067-74076086 | MS.gene79089:intron | 45.0% |
| !! | GGTGGCTTGTTATTGAAGGT+TGG | - | chr3.2:74073454-74073473 | MS.gene79089:intron | 45.0% |
| !! | TCCATTCCATTTTGGGAACC+GGG | + | chr3.2:74076040-74076059 | None:intergenic | 45.0% |
| !! | TCTTTGGATTGGCTTTCACC+TGG | - | chr3.2:74077638-74077657 | MS.gene79089:intron | 45.0% |
| AAAGCAATCCACCACCCAAC+CGG | + | chr3.2:74075804-74075823 | None:intergenic | 50.0% | |
| ACAGGGATTCCCCATCTTCA+TGG | - | chr3.2:74074304-74074323 | MS.gene79089:CDS | 50.0% | |
| AGGAGAGTGGGTGAATGAGT+GGG | - | chr3.2:74077337-74077356 | MS.gene79089:intron | 50.0% | |
| ATTGACCTTCATGCTGCTCC+CGG | - | chr3.2:74076019-74076038 | MS.gene79089:intron | 50.0% | |
| ATTTAGTCCCACAACGAGCG+AGG | + | chr3.2:74074150-74074169 | None:intergenic | 50.0% | |
| CAGCTTACAGCAGACTATCC+AGG | - | chr3.2:74075043-74075062 | MS.gene79089:intron | 50.0% | |
| CAGGGATTCCCCATCTTCAT+GGG | - | chr3.2:74074305-74074324 | MS.gene79089:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr3.2:74074002-74074021 | MS.gene79089:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr3.2:74073999-74074018 | None:intergenic | 50.0% | |
| GAGCATAGTGCAAGCAGAGA+TGG | - | chr3.2:74076058-74076077 | MS.gene79089:intron | 50.0% | |
| GCTGAATTATCATCCCACCC+TGG | + | chr3.2:74075073-74075092 | None:intergenic | 50.0% | |
| TCCCGGTTCCCAAAATGGAA+TGG | - | chr3.2:74076036-74076055 | MS.gene79089:intron | 50.0% | |
| TCTAAGGGAAGACACGCATG+AGG | + | chr3.2:74073720-74073739 | None:intergenic | 50.0% | |
| TGGAGACTTAGGGCTTGGAT+TGG | + | chr3.2:74075563-74075582 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr3.2:74074005-74074024 | None:intergenic | 50.0% |
| ! | CCCCCACTCACTCTTTTCTA+AGG | + | chr3.2:74073736-74073755 | None:intergenic | 50.0% |
| !! | AGAGCGCCGAAGATGTTCTT+AGG | - | chr3.2:74075164-74075183 | MS.gene79089:CDS | 50.0% |
| !! | GAGCGCCGAAGATGTTCTTA+GGG | - | chr3.2:74075165-74075184 | MS.gene79089:CDS | 50.0% |
| !! | GCAGAGATGGTTTTACAGGC+TGG | - | chr3.2:74076071-74076090 | MS.gene79089:intron | 50.0% |
| !! | GGAGGGTGGCTTGTTATTGA+AGG | - | chr3.2:74073450-74073469 | MS.gene79089:intron | 50.0% |
| !!! | GGGAGCACTGGGATTTTGAA+TGG | - | chr3.2:74077468-74077487 | MS.gene79089:intron | 50.0% |
| AAGTCGGGAAGGTCTGTTGC+AGG | - | chr3.2:74076702-74076721 | MS.gene79089:CDS | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr3.2:74073991-74074010 | None:intergenic | 55.0% | |
| AGCTCAATTCCCAGCAAGGC+AGG | + | chr3.2:74076424-74076443 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr3.2:74073990-74074009 | MS.gene79089:intron | 55.0% | |
| CAGACTATCCAGGCGTACCA+GGG | - | chr3.2:74075053-74075072 | MS.gene79089:intron | 55.0% | |
| CAGGAGAGTGGGTGAATGAG+TGG | - | chr3.2:74077336-74077355 | MS.gene79089:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr3.2:74073997-74074016 | MS.gene79089:intron | 55.0% | |
| GAAGTGGAGGGGTTACATGG+TGG | - | chr3.2:74073402-74073421 | MS.gene79089:intron | 55.0% | |
| GAGGAGTGAACTTAGGAGGG+TGG | - | chr3.2:74073436-74073455 | MS.gene79089:intron | 55.0% | |
| GTATCTGCAGACAATGGGGG+AGG | - | chr3.2:74074264-74074283 | MS.gene79089:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr3.2:74073991-74074010 | MS.gene79089:intron | 55.0% | |
| ! | GCAAAGCATCCTGCCTTGCT+GGG | - | chr3.2:74076412-74076431 | MS.gene79089:intron | 55.0% |
| ! | TGCAAAGCATCCTGCCTTGC+TGG | - | chr3.2:74076411-74076430 | MS.gene79089:intron | 55.0% |
| ACTATCCAGGCGTACCAGGG+TGG | - | chr3.2:74075056-74075075 | MS.gene79089:intron | 60.0% | |
| CTATCCAGGCGTACCAGGGT+GGG | - | chr3.2:74075057-74075076 | MS.gene79089:intron | 60.0% | |
| GACACCACCTCGCTCGTTGT+GGG | - | chr3.2:74074140-74074159 | MS.gene79089:intron | 60.0% | |
| GCAGACTATCCAGGCGTACC+AGG | - | chr3.2:74075052-74075071 | MS.gene79089:intron | 60.0% | |
| GCTGCTCCCGGTTCCCAAAA+TGG | - | chr3.2:74076031-74076050 | MS.gene79089:intron | 60.0% | |
| TAGTCCCACAACGAGCGAGG+TGG | + | chr3.2:74074147-74074166 | None:intergenic | 60.0% | |
| TGACACCACCTCGCTCGTTG+TGG | - | chr3.2:74074139-74074158 | MS.gene79089:intron | 60.0% | |
| ! | CTGTGAGGATACCGGTTGGG+TGG | - | chr3.2:74075790-74075809 | MS.gene79089:intron | 60.0% |
| ! | TGAGGATACCGGTTGGGTGG+TGG | - | chr3.2:74075793-74075812 | MS.gene79089:intron | 60.0% |
| GGGAACCGGGAGCAGCATGA+AGG | + | chr3.2:74076027-74076046 | None:intergenic | 65.0% | |
| TCATCCCACCCTGGTACGCC+TGG | + | chr3.2:74075064-74075083 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 74073316 | 74077684 | 74073316 | ID=MS.gene79089 |
| chr3.2 | mRNA | 74073316 | 74077684 | 74073316 | ID=MS.gene79089.t1;Parent=MS.gene79089 |
| chr3.2 | exon | 74077669 | 74077684 | 74077669 | ID=MS.gene79089.t1.exon1;Parent=MS.gene79089.t1 |
| chr3.2 | CDS | 74077669 | 74077684 | 74077669 | ID=cds.MS.gene79089.t1;Parent=MS.gene79089.t1 |
| chr3.2 | exon | 74077479 | 74077594 | 74077479 | ID=MS.gene79089.t1.exon2;Parent=MS.gene79089.t1 |
| chr3.2 | CDS | 74077479 | 74077594 | 74077479 | ID=cds.MS.gene79089.t1;Parent=MS.gene79089.t1 |
| chr3.2 | exon | 74076662 | 74076781 | 74076662 | ID=MS.gene79089.t1.exon3;Parent=MS.gene79089.t1 |
| chr3.2 | CDS | 74076662 | 74076781 | 74076662 | ID=cds.MS.gene79089.t1;Parent=MS.gene79089.t1 |
| chr3.2 | exon | 74076194 | 74076379 | 74076194 | ID=MS.gene79089.t1.exon4;Parent=MS.gene79089.t1 |
| chr3.2 | CDS | 74076194 | 74076379 | 74076194 | ID=cds.MS.gene79089.t1;Parent=MS.gene79089.t1 |
| chr3.2 | exon | 74075814 | 74075972 | 74075814 | ID=MS.gene79089.t1.exon5;Parent=MS.gene79089.t1 |
| chr3.2 | CDS | 74075814 | 74075972 | 74075814 | ID=cds.MS.gene79089.t1;Parent=MS.gene79089.t1 |
| chr3.2 | exon | 74075105 | 74075274 | 74075105 | ID=MS.gene79089.t1.exon6;Parent=MS.gene79089.t1 |
| chr3.2 | CDS | 74075105 | 74075274 | 74075105 | ID=cds.MS.gene79089.t1;Parent=MS.gene79089.t1 |
| chr3.2 | exon | 74074848 | 74075003 | 74074848 | ID=MS.gene79089.t1.exon7;Parent=MS.gene79089.t1 |
| chr3.2 | CDS | 74074848 | 74075003 | 74074848 | ID=cds.MS.gene79089.t1;Parent=MS.gene79089.t1 |
| chr3.2 | exon | 74074240 | 74074592 | 74074240 | ID=MS.gene79089.t1.exon8;Parent=MS.gene79089.t1 |
| chr3.2 | CDS | 74074240 | 74074592 | 74074240 | ID=cds.MS.gene79089.t1;Parent=MS.gene79089.t1 |
| chr3.2 | exon | 74073482 | 74073661 | 74073482 | ID=MS.gene79089.t1.exon9;Parent=MS.gene79089.t1 |
| chr3.2 | CDS | 74073482 | 74073661 | 74073482 | ID=cds.MS.gene79089.t1;Parent=MS.gene79089.t1 |
| chr3.2 | exon | 74073316 | 74073401 | 74073316 | ID=MS.gene79089.t1.exon10;Parent=MS.gene79089.t1 |
| chr3.2 | CDS | 74073316 | 74073401 | 74073316 | ID=cds.MS.gene79089.t1;Parent=MS.gene79089.t1 |
| Gene Sequence |
| Protein sequence |
