Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79233.t1 | XP_003601987.1 | 99.6 | 510 | 2 | 0 | 1 | 510 | 1 | 510 | 3.10E-288 | 1000.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79233.t1 | Q9SSV4 | 91.8 | 510 | 42 | 0 | 1 | 510 | 1 | 510 | 1.8e-276 | 952.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79233.t1 | G7J4B5 | 99.6 | 510 | 2 | 0 | 1 | 510 | 1 | 510 | 2.3e-288 | 1000.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050702 | MS.gene79233 | 0.849123 | 3.96E-60 | -1.69E-46 |
| MS.gene052224 | MS.gene79233 | 0.880213 | 6.60E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79233.t1 | MTR_3g087590 | 99.608 | 510 | 2 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1052 |
| MS.gene79233.t1 | MTR_8g091320 | 91.373 | 510 | 44 | 0 | 1 | 510 | 1 | 510 | 0.0 | 985 |
| MS.gene79233.t1 | MTR_3g087590 | 99.336 | 452 | 3 | 0 | 1 | 452 | 1 | 452 | 0.0 | 927 |
| MS.gene79233.t1 | MTR_3g087590 | 99.765 | 425 | 1 | 0 | 86 | 510 | 4 | 428 | 0.0 | 876 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79233.t1 | AT2G22240 | 88.431 | 510 | 59 | 0 | 1 | 510 | 1 | 510 | 0.0 | 963 |
| MS.gene79233.t1 | AT5G10170 | 88.235 | 510 | 60 | 0 | 1 | 510 | 1 | 510 | 0.0 | 960 |
| MS.gene79233.t1 | AT4G39800 | 88.845 | 511 | 56 | 1 | 1 | 510 | 1 | 511 | 0.0 | 959 |
| MS.gene79233.t1 | AT2G22240 | 87.778 | 450 | 55 | 0 | 1 | 450 | 1 | 450 | 0.0 | 843 |
| MS.gene79233.t1 | AT2G22240 | 88.684 | 380 | 43 | 0 | 131 | 510 | 1 | 380 | 0.0 | 718 |
Find 134 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATATTCATGTCCCTAAAT+TGG | 0.139724 | 3.1:+70443120 | MS.gene79233:CDS |
| TAGGATACTAACCCCAATTT+AGG | 0.157622 | 3.1:-70443133 | None:intergenic |
| ACATGAATTCAGGGAATTTA+AGG | 0.214114 | 3.1:+70444338 | MS.gene79233:intron |
| CACCAAAACAGATTTCATTT+TGG | 0.237842 | 3.1:-70444730 | None:intergenic |
| TAGGGTAATGCTTGTGGGCT+GGG | 0.247084 | 3.1:+70443236 | MS.gene79233:intron |
| AGTCAAGGATCCAAAGTAAT+TGG | 0.258694 | 3.1:-70443433 | None:intergenic |
| TTTGGCTGCTCCTATTATCT+TGG | 0.260165 | 3.1:+70445320 | MS.gene79233:CDS |
| GACCAAAATGAAATCTGTTT+TGG | 0.315009 | 3.1:+70444728 | MS.gene79233:CDS |
| AGAACCAAGTCCAAGATAAT+AGG | 0.315065 | 3.1:-70445330 | None:intergenic |
| ACTTAATGTCTTTGATGATT+TGG | 0.316276 | 3.1:-70444223 | None:intergenic |
| GTTTGCCATTGCTTGTGTTA+TGG | 0.321854 | 3.1:+70444506 | MS.gene79233:CDS |
| GGCTTGTTGAATCTTATCTT+TGG | 0.324221 | 3.1:-70443412 | None:intergenic |
| GATATTCATGTCCCTAAATT+GGG | 0.324625 | 3.1:+70443121 | MS.gene79233:CDS |
| TTAGGGTAATGCTTGTGGGC+TGG | 0.326783 | 3.1:+70443235 | MS.gene79233:intron |
| TGATCATGTTGTAGTCATTA+AGG | 0.330877 | 3.1:+70445102 | MS.gene79233:CDS |
| CACATGTGAGGACTCCCTTT+TGG | 0.337114 | 3.1:+70445302 | MS.gene79233:CDS |
| TGCTCCTATTATCTTGGACT+TGG | 0.337540 | 3.1:+70445326 | MS.gene79233:CDS |
| AATCAAACAGTTGTTCTTGA+TGG | 0.339221 | 3.1:-70444679 | None:intergenic |
| CAATTTAGGGACATGAATAT+CGG | 0.345716 | 3.1:-70443119 | None:intergenic |
| TTCTGTCCACAGCAGCAAAA+AGG | 0.352039 | 3.1:-70444455 | None:intergenic |
| AGGATACTAACCCCAATTTA+GGG | 0.368499 | 3.1:-70443132 | None:intergenic |
| CTGATGCCATGGCTAGGGCC+AGG | 0.381997 | 3.1:+70444051 | MS.gene79233:CDS |
| ATTCAACAAGCCAATTACTT+TGG | 0.386610 | 3.1:+70443423 | MS.gene79233:CDS |
| TCCTTGGAGCGGAAGGTTTG+TGG | 0.393131 | 3.1:-70445007 | None:intergenic |
| CCTTGGAGCGGAAGGTTTGT+GGG | 0.393231 | 3.1:-70445006 | None:intergenic |
| GAATCCATGGTTCCACTTCC+CGG | 0.397208 | 3.1:+70444116 | MS.gene79233:CDS |
| GTGGATTTCCTTGTAGGAGC+TGG | 0.403897 | 3.1:+70444750 | MS.gene79233:CDS |
| TTATCTGACCAAGGCTCCTC+TGG | 0.410514 | 3.1:+70446121 | MS.gene79233:CDS |
| GAGAATGTTCCTTTCATCAA+TGG | 0.416258 | 3.1:+70444528 | MS.gene79233:CDS |
| TAACACAAGCAATGGCAAAC+AGG | 0.418453 | 3.1:-70444503 | None:intergenic |
| GTTGCTCTTGGAAATTTCCT+TGG | 0.419538 | 3.1:-70445023 | None:intergenic |
| GTCAAAGCAGCGAGCAATGC+TGG | 0.421080 | 3.1:+70446277 | MS.gene79233:CDS |
| TCTAGGATCATGTTGTTCTC+TGG | 0.422099 | 3.1:-70446332 | None:intergenic |
| ATCGTCAACAACGTTGCTCT+TGG | 0.428897 | 3.1:-70445035 | None:intergenic |
| GATTTCATTGCTGCTAATCA+AGG | 0.434233 | 3.1:+70444152 | MS.gene79233:CDS |
| GAGCATGAATTTCCTCTCCT+TGG | 0.438687 | 3.1:-70443485 | None:intergenic |
| GAGCAACGTTGTTGACGATA+TGG | 0.445374 | 3.1:+70445039 | MS.gene79233:CDS |
| TTGTTGAATCTTATCTTTGG+TGG | 0.450721 | 3.1:-70443409 | None:intergenic |
| CCCTGCTTCACTTGTACTCT+AGG | 0.451998 | 3.1:-70446349 | None:intergenic |
| TGATTAGCAGCAATGAAATC+CGG | 0.452153 | 3.1:-70444149 | None:intergenic |
| ATCAAGAACAACTGTTTGAT+TGG | 0.452379 | 3.1:+70444681 | MS.gene79233:CDS |
| TAACTGAGGATGGTAGCAAC+AGG | 0.452446 | 3.1:-70446101 | None:intergenic |
| TTTGTTAGGGTAATGCTTGT+GGG | 0.455984 | 3.1:+70443231 | MS.gene79233:intron |
| TTGATTTGCAAAAGCAATTG+AGG | 0.457030 | 3.1:+70444084 | MS.gene79233:CDS |
| AGATAATAGGAGCAGCCAAA+AGG | 0.457683 | 3.1:-70445317 | None:intergenic |
| AGGTACAGTAACTTAGTTGT+AGG | 0.460941 | 3.1:+70444411 | MS.gene79233:CDS |
| TTAATGACTACAACATGATC+AGG | 0.467562 | 3.1:-70445100 | None:intergenic |
| AGGGTAATGCTTGTGGGCTG+GGG | 0.467936 | 3.1:+70443237 | MS.gene79233:intron |
| GAAATCCGGGTCATAGATAC+CGG | 0.470564 | 3.1:-70444135 | None:intergenic |
| GCATTCACCACTGGTGTGCC+TGG | 0.475338 | 3.1:-70446251 | None:intergenic |
| GATTCAGTGTACTTAACATT+GGG | 0.477319 | 3.1:-70442986 | None:intergenic |
| GGTGGTTTCGTAATTGTAAA+CGG | 0.478186 | 3.1:-70443020 | None:intergenic |
| GTAATGCTTGTGGGCTGGGG+TGG | 0.481711 | 3.1:+70443240 | MS.gene79233:CDS |
| GGAACCATGGATTCCATGTA+AGG | 0.483038 | 3.1:-70444107 | None:intergenic |
| GATAATAGGAGCAGCCAAAA+GGG | 0.486125 | 3.1:-70445316 | None:intergenic |
| ACGTGCAAATAACGTTATCA+AGG | 0.491091 | 3.1:+70444178 | MS.gene79233:CDS |
| AGGAAGCAAACAAAGTGGAC+AGG | 0.493386 | 3.1:+70444358 | MS.gene79233:CDS |
| TGATGCCATGGCTAGGGCCA+GGG | 0.493673 | 3.1:+70444052 | MS.gene79233:CDS |
| GGAAATTTCCTTGGAGCGGA+AGG | 0.501533 | 3.1:-70445014 | None:intergenic |
| AAATATTTACCATTGGAAGA+AGG | 0.501662 | 3.1:-70443518 | None:intergenic |
| CAAGCTTCAGCTATTCGAGT+TGG | 0.504429 | 3.1:+70443456 | MS.gene79233:CDS |
| CCTTGTAGGAGCTGGTATCA+AGG | 0.505836 | 3.1:+70444758 | MS.gene79233:CDS |
| AAAGCAATTGAGGCCTTACA+TGG | 0.505909 | 3.1:+70444094 | MS.gene79233:CDS |
| ATAGTGAGTTACAATCATCT+TGG | 0.506560 | 3.1:+70444956 | MS.gene79233:CDS |
| AGCAATAACACCACCGGTAA+GGG | 0.507926 | 3.1:-70443277 | None:intergenic |
| CTCTTGCTGTCACCAACATA+AGG | 0.508453 | 3.1:-70445216 | None:intergenic |
| ATTTGTTAGGGTAATGCTTG+TGG | 0.509057 | 3.1:+70443230 | MS.gene79233:intron |
| TTTCAAGAGCCTTCTTCCAA+TGG | 0.511249 | 3.1:+70443509 | MS.gene79233:CDS |
| CATGAGAGCTTGTGTTGGAT+TGG | 0.511914 | 3.1:+70446307 | MS.gene79233:CDS |
| AACAACGGTTCAACCCTTAC+CGG | 0.512660 | 3.1:+70443264 | MS.gene79233:CDS |
| CTTGTTCATGAAAATCGTAA+TGG | 0.514368 | 3.1:+70443046 | MS.gene79233:CDS |
| TTGCAGTATGTGCCTTATGT+TGG | 0.518481 | 3.1:+70445204 | MS.gene79233:intron |
| AGATTCAGTGTACTTAACAT+TGG | 0.521108 | 3.1:-70442987 | None:intergenic |
| TTTGACAATGCATTCACCAC+TGG | 0.524218 | 3.1:-70446260 | None:intergenic |
| CCTTGATACCAGCTCCTACA+AGG | 0.526501 | 3.1:-70444758 | None:intergenic |
| TTAACGCACCAGAGGAGCCT+TGG | 0.528664 | 3.1:-70446129 | None:intergenic |
| TAGCAATAACACCACCGGTA+AGG | 0.532037 | 3.1:-70443278 | None:intergenic |
| AATCATCTTGGAAACAATGA+TGG | 0.537294 | 3.1:+70444968 | MS.gene79233:CDS |
| GGGTCATAGATACCGGGAAG+TGG | 0.539794 | 3.1:-70444128 | None:intergenic |
| ACATGATCAGGATGTTCGCC+AGG | 0.540181 | 3.1:-70445088 | None:intergenic |
| TGGACAGGGTTGTTGTACTC+TGG | 0.548164 | 3.1:+70444373 | MS.gene79233:CDS |
| CCTTGCTGATGCCATGGCTA+GGG | 0.551502 | 3.1:+70444046 | MS.gene79233:CDS |
| GATGGTAGCAACAGGGTGAA+AGG | 0.552503 | 3.1:-70446093 | None:intergenic |
| GAGGCCTTACATGGAATCCA+TGG | 0.553960 | 3.1:+70444103 | MS.gene79233:CDS |
| ATTCGAGTTGGATCTTTCCA+AGG | 0.554359 | 3.1:+70443468 | MS.gene79233:CDS |
| AACATCATGAGAGCTTGTGT+TGG | 0.560655 | 3.1:+70446302 | MS.gene79233:CDS |
| CCCACAAACCTTCCGCTCCA+AGG | 0.565550 | 3.1:+70445006 | MS.gene79233:CDS |
| AGTTGGATCTTTCCAAGGAG+AGG | 0.567879 | 3.1:+70443473 | MS.gene79233:CDS |
| TGAGGACTTCCATTGATGAA+AGG | 0.570861 | 3.1:-70444537 | None:intergenic |
| ACCTTGCTGATGCCATGGCT+AGG | 0.571457 | 3.1:+70444045 | MS.gene79233:CDS |
| GTTACTGTACCTCTCTGTGT+TGG | 0.574857 | 3.1:-70444400 | None:intergenic |
| CTTGGAGCGGAAGGTTTGTG+GGG | 0.577089 | 3.1:-70445005 | None:intergenic |
| CATGAACCTTGCTGATGCCA+TGG | 0.578935 | 3.1:+70444040 | MS.gene79233:CDS |
| AACACAAGCAATGGCAAACA+GGG | 0.579935 | 3.1:-70444502 | None:intergenic |
| TCAGTTTAAATCTGAAGCTG+AGG | 0.583789 | 3.1:+70445377 | MS.gene79233:CDS |
| TTCACCACTGGTGTGCCTGG+TGG | 0.584765 | 3.1:-70446248 | None:intergenic |
| GCAATGGCAAACAGGGTGGA+AGG | 0.586236 | 3.1:-70444495 | None:intergenic |
| GATTAGCAGCAATGAAATCC+GGG | 0.589255 | 3.1:-70444148 | None:intergenic |
| ATTGGAAGAAGGCTCTTGAA+AGG | 0.589300 | 3.1:-70443507 | None:intergenic |
| ATCGTAATGGCACTTATCAG+TGG | 0.589528 | 3.1:+70443059 | MS.gene79233:CDS |
| GTGGGCTGGGGTGGAAACAA+CGG | 0.593220 | 3.1:+70443249 | MS.gene79233:CDS |
| TTGTAACTCACTATTGATGT+TGG | 0.597352 | 3.1:-70444947 | None:intergenic |
| ACTTCCCGGTATCTATGACC+CGG | 0.600843 | 3.1:+70444130 | MS.gene79233:CDS |
| TGGTGACAGCAAGAGAGCTA+TGG | 0.602579 | 3.1:+70445224 | MS.gene79233:CDS |
| ATTCTCCATAACACAAGCAA+TGG | 0.605875 | 3.1:-70444511 | None:intergenic |
| CCCTAGCCATGGCATCAGCA+AGG | 0.607382 | 3.1:-70444046 | None:intergenic |
| AAGAACAACTGTTTGATTGG+TGG | 0.609331 | 3.1:+70444684 | MS.gene79233:CDS |
| TTCGCCAGGTGCATAGAGGA+TGG | 0.609515 | 3.1:-70445074 | None:intergenic |
| AATGCCATCCTCTATGCACC+TGG | 0.609865 | 3.1:+70445070 | MS.gene79233:CDS |
| TTATACGTGCAGGTTCCACC+AGG | 0.610525 | 3.1:+70446233 | MS.gene79233:intron |
| ATATTCATGTCCCTAAATTG+GGG | 0.612827 | 3.1:+70443122 | MS.gene79233:CDS |
| GGAAGGTTTGTGGGGCTGAG+AGG | 0.615482 | 3.1:-70444997 | None:intergenic |
| CGTGCAAATAACGTTATCAA+GGG | 0.615803 | 3.1:+70444179 | MS.gene79233:CDS |
| CTTGGTCAGATAACTGAGGA+TGG | 0.622462 | 3.1:-70446111 | None:intergenic |
| CCTGGAACAAAAGTGTTCTG+AGG | 0.628658 | 3.1:-70444555 | None:intergenic |
| TCTTGGAAATTTCCTTGGAG+CGG | 0.633995 | 3.1:-70445018 | None:intergenic |
| AATAGCTGAAGCTTGAGTCA+AGG | 0.634507 | 3.1:-70443448 | None:intergenic |
| GGAAGCAAACAAAGTGGACA+GGG | 0.639443 | 3.1:+70444359 | MS.gene79233:CDS |
| GGTGGTGATGATTTCAAGAG+TGG | 0.641949 | 3.1:+70444702 | MS.gene79233:CDS |
| TCTGTTAGCAATAACACCAC+CGG | 0.649419 | 3.1:-70443283 | None:intergenic |
| AGCTATGGATGAGTACACTT+CGG | 0.651582 | 3.1:+70445239 | MS.gene79233:CDS |
| ATTTAAGGAAGCAAACAAAG+TGG | 0.652703 | 3.1:+70444353 | MS.gene79233:CDS |
| CATCCTCAGTTATCTGACCA+AGG | 0.657948 | 3.1:+70446112 | MS.gene79233:CDS |
| AACGGTTCAACCCTTACCGG+TGG | 0.661685 | 3.1:+70443267 | MS.gene79233:CDS |
| AACTGAGGATGGTAGCAACA+GGG | 0.662195 | 3.1:-70446100 | None:intergenic |
| GATACCGGGAAGTGGAACCA+TGG | 0.668036 | 3.1:-70444120 | None:intergenic |
| GATGTTCGCCAGGTGCATAG+AGG | 0.676178 | 3.1:-70445078 | None:intergenic |
| AAATCCGGGTCATAGATACC+GGG | 0.679094 | 3.1:-70444134 | None:intergenic |
| ACAAGCAATGGCAAACAGGG+TGG | 0.679241 | 3.1:-70444499 | None:intergenic |
| GGTTCCACCAGGCACACCAG+TGG | 0.697669 | 3.1:+70446244 | MS.gene79233:intron |
| TCTGGACTGCCAACACAGAG+AGG | 0.697710 | 3.1:+70444391 | MS.gene79233:CDS |
| TGTAGGACTCAATGACACCA+TGG | 0.702021 | 3.1:+70444428 | MS.gene79233:CDS |
| GAGCCTTGGTCAGATAACTG+AGG | 0.725753 | 3.1:-70446115 | None:intergenic |
| TGTGTTGCACAACACATGTG+AGG | 0.753320 | 3.1:+70445290 | MS.gene79233:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTTAAAAATAAAA+TGG | + | chr3.1:70443906-70443925 | MS.gene79233:intron | 0.0% |
| !! | AAAAAATCAATTAAAACAAA+AGG | - | chr3.1:70443552-70443571 | None:intergenic | 10.0% |
| !! | AAAAATCAATTAAAACAAAA+GGG | - | chr3.1:70443551-70443570 | None:intergenic | 10.0% |
| !! | TTAACTTTATAAATAATACA+AGG | - | chr3.1:70446040-70446059 | None:intergenic | 10.0% |
| !!! | TTTTATTAATTGTGATTAAT+GGG | + | chr3.1:70443334-70443353 | MS.gene79233:intron | 10.0% |
| !!! | TTTTTATTAATTGTGATTAA+TGG | + | chr3.1:70443333-70443352 | MS.gene79233:intron | 10.0% |
| !! | AAAATCAATTAAAACAAAAG+GGG | - | chr3.1:70443550-70443569 | None:intergenic | 15.0% |
| !!! | AATTCATATTTAACAGTTTT+AGG | - | chr3.1:70443094-70443113 | None:intergenic | 15.0% |
| !!! | AATTTTGATTATGATTTTCA+GGG | + | chr3.1:70443374-70443393 | MS.gene79233:intron | 15.0% |
| !!! | ATGTAGTTTTTCTATTTTTT+TGG | + | chr3.1:70443617-70443636 | MS.gene79233:intron | 15.0% |
| !!! | TAATTTTGATTATGATTTTC+AGG | + | chr3.1:70443373-70443392 | MS.gene79233:intron | 15.0% |
| !! | ATTTGATACAAAGATTGTAA+TGG | - | chr3.1:70445544-70445563 | None:intergenic | 20.0% |
| !! | GAAAGATTATGAATGAAATT+AGG | - | chr3.1:70443155-70443174 | None:intergenic | 20.0% |
| !! | GTTTAAGAAATATTTACCAT+TGG | - | chr3.1:70443528-70443547 | None:intergenic | 20.0% |
| !! | TATTATATTATTATACGTGC+AGG | + | chr3.1:70446223-70446242 | MS.gene79233:intron | 20.0% |
| !! | TGATTATGAACAATAACAAA+TGG | - | chr3.1:70445753-70445772 | None:intergenic | 20.0% |
| !! | TTAAATTGAATACGACTAAT+AGG | + | chr3.1:70443735-70443754 | MS.gene79233:intron | 20.0% |
| !! | TTATAAAGTTAACTATGTTG+TGG | + | chr3.1:70446048-70446067 | MS.gene79233:intron | 20.0% |
| !!! | ACTTTTCTTTTATTATCATC+AGG | + | chr3.1:70444642-70444661 | MS.gene79233:intron | 20.0% |
| !!! | ATTTATTGGTTTGATTTGTT+AGG | + | chr3.1:70443217-70443236 | MS.gene79233:intron | 20.0% |
| !!! | ATTTTGATTATGATTTTCAG+GGG | + | chr3.1:70443375-70443394 | MS.gene79233:intron | 20.0% |
| !!! | CTTTTCTTTTATTATCATCA+GGG | + | chr3.1:70444643-70444662 | MS.gene79233:intron | 20.0% |
| !!! | TAAAGCATTAAAGCTTTTTT+TGG | + | chr3.1:70445711-70445730 | MS.gene79233:intron | 20.0% |
| !!! | TTTAATTTTGCAACAAGAAA+AGG | + | chr3.1:70444895-70444914 | MS.gene79233:intron | 20.0% |
| !!! | TTTATTGGTTTGATTTGTTA+GGG | + | chr3.1:70443218-70443237 | MS.gene79233:intron | 20.0% |
| !!! | TTTTCTATTTTTTTGGTTCA+AGG | + | chr3.1:70443624-70443643 | MS.gene79233:intron | 20.0% |
| ! | AAATATTTACCATTGGAAGA+AGG | - | chr3.1:70443521-70443540 | None:intergenic | 25.0% |
| ! | ATATTAATCTACATGCTTCA+TGG | + | chr3.1:70444253-70444272 | MS.gene79233:intron | 25.0% |
| ! | CAGATGGAATTATAGTATTA+AGG | - | chr3.1:70445616-70445635 | None:intergenic | 25.0% |
| ! | GAAACTTGAGAATAACATAT+TGG | - | chr3.1:70445916-70445935 | None:intergenic | 25.0% |
| ! | GAATTATAGTATTAAGGAGA+CGG | - | chr3.1:70445610-70445629 | None:intergenic | 25.0% |
| ! | GTGATTAATGGGAAATTATA+TGG | + | chr3.1:70443345-70443364 | MS.gene79233:intron | 25.0% |
| ! | TTAATGAACTTATGTTGTGA+AGG | - | chr3.1:70445788-70445807 | None:intergenic | 25.0% |
| !! | AATTCATTGATAACAATCTC+TGG | - | chr3.1:70445465-70445484 | None:intergenic | 25.0% |
| !! | ACTTAATGTCTTTGATGATT+TGG | - | chr3.1:70444226-70444245 | None:intergenic | 25.0% |
| !! | ATATTCAGCAAATTTTAAGC+TGG | - | chr3.1:70444306-70444325 | None:intergenic | 25.0% |
| !! | TTATATACTGTAACCTTTTC+AGG | + | chr3.1:70445156-70445175 | MS.gene79233:intron | 25.0% |
| !! | TTCTTTTGCAACATAAACTA+GGG | - | chr3.1:70445416-70445435 | None:intergenic | 25.0% |
| !!! | TAACTTTTGTTTCATGTCTT+TGG | + | chr3.1:70445867-70445886 | MS.gene79233:intron | 25.0% |
| AAAATGACACGAAATGCAAA+TGG | - | chr3.1:70445975-70445994 | None:intergenic | 30.0% | |
| AAATAAAATGGAGTCCAAGA+TGG | + | chr3.1:70443918-70443937 | MS.gene79233:intron | 30.0% | |
| AATCAAACAGTTGTTCTTGA+TGG | - | chr3.1:70444682-70444701 | None:intergenic | 30.0% | |
| AATCAAGTGACAGATTTAGA+GGG | - | chr3.1:70444602-70444621 | None:intergenic | 30.0% | |
| AATCATCTTGGAAACAATGA+TGG | + | chr3.1:70444968-70444987 | MS.gene79233:CDS | 30.0% | |
| ACATGAATTCAGGGAATTTA+AGG | + | chr3.1:70444338-70444357 | MS.gene79233:intron | 30.0% | |
| AGATTCAGTGTACTTAACAT+TGG | - | chr3.1:70442990-70443009 | None:intergenic | 30.0% | |
| ATAAAGAGAAGAAACAAACC+TGG | - | chr3.1:70444576-70444595 | None:intergenic | 30.0% | |
| ATAGTGAGTTACAATCATCT+TGG | + | chr3.1:70444956-70444975 | MS.gene79233:CDS | 30.0% | |
| ATATTCATGTCCCTAAATTG+GGG | + | chr3.1:70443122-70443141 | MS.gene79233:CDS | 30.0% | |
| ATCAAGAACAACTGTTTGAT+TGG | + | chr3.1:70444681-70444700 | MS.gene79233:CDS | 30.0% | |
| ATCAGTTTAAGCATGCTATA+AGG | + | chr3.1:70443839-70443858 | MS.gene79233:intron | 30.0% | |
| ATTCAACAAGCCAATTACTT+TGG | + | chr3.1:70443423-70443442 | MS.gene79233:CDS | 30.0% | |
| ATTTAAGGAAGCAAACAAAG+TGG | + | chr3.1:70444353-70444372 | MS.gene79233:CDS | 30.0% | |
| ATTTAATATGTGACATGCAG+TGG | - | chr3.1:70443721-70443740 | None:intergenic | 30.0% | |
| ATTTCAACAGGTCTAATTTG+AGG | + | chr3.1:70443758-70443777 | MS.gene79233:intron | 30.0% | |
| CAATTTAGGGACATGAATAT+CGG | - | chr3.1:70443122-70443141 | None:intergenic | 30.0% | |
| CTTGTTCATGAAAATCGTAA+TGG | + | chr3.1:70443046-70443065 | MS.gene79233:CDS | 30.0% | |
| GATATTCATGTCCCTAAATT+GGG | + | chr3.1:70443121-70443140 | MS.gene79233:CDS | 30.0% | |
| GATTCAGTGTACTTAACATT+GGG | - | chr3.1:70442989-70443008 | None:intergenic | 30.0% | |
| TAATCAAGTGACAGATTTAG+AGG | - | chr3.1:70444603-70444622 | None:intergenic | 30.0% | |
| TGATCATGTTGTAGTCATTA+AGG | + | chr3.1:70445102-70445121 | MS.gene79233:CDS | 30.0% | |
| TTAATGACTACAACATGATC+AGG | - | chr3.1:70445103-70445122 | None:intergenic | 30.0% | |
| TTCGTTGAAAAACTATATGC+AGG | + | chr3.1:70443974-70443993 | MS.gene79233:intron | 30.0% | |
| TTGTAACTCACTATTGATGT+TGG | - | chr3.1:70444950-70444969 | None:intergenic | 30.0% | |
| TTGTTGAATCTTATCTTTGG+TGG | - | chr3.1:70443412-70443431 | None:intergenic | 30.0% | |
| ! | ACGATTTTCATGAACAAGTT+CGG | - | chr3.1:70443044-70443063 | None:intergenic | 30.0% |
| ! | CACCAAAACAGATTTCATTT+TGG | - | chr3.1:70444733-70444752 | None:intergenic | 30.0% |
| ! | GACCAAAATGAAATCTGTTT+TGG | + | chr3.1:70444728-70444747 | MS.gene79233:CDS | 30.0% |
| ! | GTTCTTTTGCAACATAAACT+AGG | - | chr3.1:70445417-70445436 | None:intergenic | 30.0% |
| ! | GTTGCTCTGAATTAATGTTT+AGG | + | chr3.1:70445831-70445850 | MS.gene79233:intron | 30.0% |
| ! | TACACTTCGGAAATTTTCAT+GGG | + | chr3.1:70445252-70445271 | MS.gene79233:CDS | 30.0% |
| !! | CAAAATGAAATCTGTTTTGG+TGG | + | chr3.1:70444731-70444750 | MS.gene79233:CDS | 30.0% |
| !! | TTGATTTGCAAAAGCAATTG+AGG | + | chr3.1:70444084-70444103 | MS.gene79233:CDS | 30.0% |
| AAGAACAACTGTTTGATTGG+TGG | + | chr3.1:70444684-70444703 | MS.gene79233:CDS | 35.0% | |
| AATCAAAGAACTCTCGTTTC+AGG | - | chr3.1:70445515-70445534 | None:intergenic | 35.0% | |
| ACGACTAATAGGATTTCAAC+AGG | + | chr3.1:70443746-70443765 | MS.gene79233:intron | 35.0% | |
| ACGTGCAAATAACGTTATCA+AGG | + | chr3.1:70444178-70444197 | MS.gene79233:CDS | 35.0% | |
| AGAACCAAGTCCAAGATAAT+AGG | - | chr3.1:70445333-70445352 | None:intergenic | 35.0% | |
| AGGATACTAACCCCAATTTA+GGG | - | chr3.1:70443135-70443154 | None:intergenic | 35.0% | |
| AGGTACAGTAACTTAGTTGT+AGG | + | chr3.1:70444411-70444430 | MS.gene79233:CDS | 35.0% | |
| AGTCAAGGATCCAAAGTAAT+TGG | - | chr3.1:70443436-70443455 | None:intergenic | 35.0% | |
| ATCCTTAACTCAAACCATCT+TGG | - | chr3.1:70443935-70443954 | None:intergenic | 35.0% | |
| ATTCTCCATAACACAAGCAA+TGG | - | chr3.1:70444514-70444533 | None:intergenic | 35.0% | |
| CAAATCAATGTCAAAAACCC+TGG | - | chr3.1:70444072-70444091 | None:intergenic | 35.0% | |
| CAACATAATCATGCAGCTTT+AGG | - | chr3.1:70445815-70445834 | None:intergenic | 35.0% | |
| CACCAAAAACAATGTCATCA+GGG | - | chr3.1:70444004-70444023 | None:intergenic | 35.0% | |
| CCTATGTTGACATGAATTCA+GGG | + | chr3.1:70444329-70444348 | MS.gene79233:intron | 35.0% | |
| CGATATTCATGTCCCTAAAT+TGG | + | chr3.1:70443120-70443139 | MS.gene79233:CDS | 35.0% | |
| CGTGCAAATAACGTTATCAA+GGG | + | chr3.1:70444179-70444198 | MS.gene79233:CDS | 35.0% | |
| GAAGAGTAAAAGACCTGAAA+AGG | - | chr3.1:70445172-70445191 | None:intergenic | 35.0% | |
| GAGAATGTTCCTTTCATCAA+TGG | + | chr3.1:70444528-70444547 | MS.gene79233:CDS | 35.0% | |
| GATTTCATTGCTGCTAATCA+AGG | + | chr3.1:70444152-70444171 | MS.gene79233:CDS | 35.0% | |
| GGTGGTTTCGTAATTGTAAA+CGG | - | chr3.1:70443023-70443042 | None:intergenic | 35.0% | |
| TAGGATACTAACCCCAATTT+AGG | - | chr3.1:70443136-70443155 | None:intergenic | 35.0% | |
| TCAGTTTCAAGAGACAAATC+CGG | + | chr3.1:70446194-70446213 | MS.gene79233:intron | 35.0% | |
| TCCTATGTTGACATGAATTC+AGG | + | chr3.1:70444328-70444347 | MS.gene79233:intron | 35.0% | |
| TGATTAGCAGCAATGAAATC+CGG | - | chr3.1:70444152-70444171 | None:intergenic | 35.0% | |
| TTGCATGTCATTGTGTAACT+TGG | - | chr3.1:70445683-70445702 | None:intergenic | 35.0% | |
| TTTGTTAGGGTAATGCTTGT+GGG | + | chr3.1:70443231-70443250 | MS.gene79233:intron | 35.0% | |
| ! | AACCCTGATGACATTGTTTT+TGG | + | chr3.1:70443999-70444018 | MS.gene79233:CDS | 35.0% |
| ! | AGGTCTTTTACTCTTCACTT+TGG | + | chr3.1:70445176-70445195 | MS.gene79233:intron | 35.0% |
| ! | ATTTGTTAGGGTAATGCTTG+TGG | + | chr3.1:70443230-70443249 | MS.gene79233:intron | 35.0% |
| ! | ATTTTCATGAACAAGTTCGG+TGG | - | chr3.1:70443041-70443060 | None:intergenic | 35.0% |
| ! | GTACACTTCGGAAATTTTCA+TGG | + | chr3.1:70445251-70445270 | MS.gene79233:CDS | 35.0% |
| ! | TCAGTTTAAATCTGAAGCTG+AGG | + | chr3.1:70445377-70445396 | MS.gene79233:CDS | 35.0% |
| !! | ATAATCATGCAGCTTTAGGA+AGG | - | chr3.1:70445811-70445830 | None:intergenic | 35.0% |
| !! | GGCTTGTTGAATCTTATCTT+TGG | - | chr3.1:70443415-70443434 | None:intergenic | 35.0% |
| !!! | ATGACATTGTTTTTGGTGGA+TGG | + | chr3.1:70444006-70444025 | MS.gene79233:CDS | 35.0% |
| !!! | GATTTTCAGGGGTATTTCAT+GGG | + | chr3.1:70443386-70443405 | MS.gene79233:intron | 35.0% |
| !!! | TGACATTGTTTTTGGTGGAT+GGG | + | chr3.1:70444007-70444026 | MS.gene79233:CDS | 35.0% |
| !!! | TGATTTTCAGGGGTATTTCA+TGG | + | chr3.1:70443385-70443404 | MS.gene79233:intron | 35.0% |
| AAAGCAATTGAGGCCTTACA+TGG | + | chr3.1:70444094-70444113 | MS.gene79233:CDS | 40.0% | |
| AACACAAGCAATGGCAAACA+GGG | - | chr3.1:70444505-70444524 | None:intergenic | 40.0% | |
| AACATCATGAGAGCTTGTGT+TGG | + | chr3.1:70446302-70446321 | MS.gene79233:CDS | 40.0% | |
| AAGTAGAATTAACGCACCAG+AGG | - | chr3.1:70446140-70446159 | None:intergenic | 40.0% | |
| AATAGCTGAAGCTTGAGTCA+AGG | - | chr3.1:70443451-70443470 | None:intergenic | 40.0% | |
| ACATAAGGCACATACTGCAA+AGG | - | chr3.1:70445204-70445223 | None:intergenic | 40.0% | |
| AGATAATAGGAGCAGCCAAA+AGG | - | chr3.1:70445320-70445339 | None:intergenic | 40.0% | |
| AGCTATGGATGAGTACACTT+CGG | + | chr3.1:70445239-70445258 | MS.gene79233:CDS | 40.0% | |
| ATCGTAATGGCACTTATCAG+TGG | + | chr3.1:70443059-70443078 | MS.gene79233:CDS | 40.0% | |
| ATTGGAAGAAGGCTCTTGAA+AGG | - | chr3.1:70443510-70443529 | None:intergenic | 40.0% | |
| CCACCAAAAACAATGTCATC+AGG | - | chr3.1:70444005-70444024 | None:intergenic | 40.0% | |
| CCCTGAATTCATGTCAACAT+AGG | - | chr3.1:70444332-70444351 | None:intergenic | 40.0% | |
| GATAATAGGAGCAGCCAAAA+GGG | - | chr3.1:70445319-70445338 | None:intergenic | 40.0% | |
| GATTAGCAGCAATGAAATCC+GGG | - | chr3.1:70444151-70444170 | None:intergenic | 40.0% | |
| GTTGCTCTTGGAAATTTCCT+TGG | - | chr3.1:70445026-70445045 | None:intergenic | 40.0% | |
| GTTTGCCATTGCTTGTGTTA+TGG | + | chr3.1:70444506-70444525 | MS.gene79233:CDS | 40.0% | |
| TAACACAAGCAATGGCAAAC+AGG | - | chr3.1:70444506-70444525 | None:intergenic | 40.0% | |
| TCTGTTAGCAATAACACCAC+CGG | - | chr3.1:70443286-70443305 | None:intergenic | 40.0% | |
| TCTTGGAAATTTCCTTGGAG+CGG | - | chr3.1:70445021-70445040 | None:intergenic | 40.0% | |
| TGAGGACTTCCATTGATGAA+AGG | - | chr3.1:70444540-70444559 | None:intergenic | 40.0% | |
| TGCTCCTATTATCTTGGACT+TGG | + | chr3.1:70445326-70445345 | MS.gene79233:CDS | 40.0% | |
| TTGCAGTATGTGCCTTATGT+TGG | + | chr3.1:70445204-70445223 | MS.gene79233:intron | 40.0% | |
| TTTCAAGAGCCTTCTTCCAA+TGG | + | chr3.1:70443509-70443528 | MS.gene79233:CDS | 40.0% | |
| TTTGACAATGCATTCACCAC+TGG | - | chr3.1:70446263-70446282 | None:intergenic | 40.0% | |
| TTTGGCTGCTCCTATTATCT+TGG | + | chr3.1:70445320-70445339 | MS.gene79233:CDS | 40.0% | |
| ! | AAACTGTGCAACTTGCTCAA+TGG | + | chr3.1:70445570-70445589 | MS.gene79233:intron | 40.0% |
| ! | ACTTCGGAAATTTTCATGGG+TGG | + | chr3.1:70445255-70445274 | MS.gene79233:CDS | 40.0% |
| ! | CTTCGGAAATTTTCATGGGT+GGG | + | chr3.1:70445256-70445275 | MS.gene79233:CDS | 40.0% |
| ! | GTCCAAGATGGTTTGAGTTA+AGG | + | chr3.1:70443930-70443949 | MS.gene79233:intron | 40.0% |
| ! | TCTAGGATCATGTTGTTCTC+TGG | - | chr3.1:70446335-70446354 | None:intergenic | 40.0% |
| ! | TGCAACTTGCTCAATGGTTA+TGG | + | chr3.1:70445576-70445595 | MS.gene79233:intron | 40.0% |
| !! | ATTCGAGTTGGATCTTTCCA+AGG | + | chr3.1:70443468-70443487 | MS.gene79233:CDS | 40.0% |
| !!! | CCTGATGACATTGTTTTTGG+TGG | + | chr3.1:70444002-70444021 | MS.gene79233:CDS | 40.0% |
| !!! | GTTTTGGTGGATTTCCTTGT+AGG | + | chr3.1:70444744-70444763 | MS.gene79233:CDS | 40.0% |
| AAATCCGGGTCATAGATACC+GGG | - | chr3.1:70444137-70444156 | None:intergenic | 45.0% | |
| AACAACGGTTCAACCCTTAC+CGG | + | chr3.1:70443264-70443283 | MS.gene79233:CDS | 45.0% | |
| AACTGAGGATGGTAGCAACA+GGG | - | chr3.1:70446103-70446122 | None:intergenic | 45.0% | |
| AGCAATAACACCACCGGTAA+GGG | - | chr3.1:70443280-70443299 | None:intergenic | 45.0% | |
| AGCAGCAAAAAGGTTCTCCA+TGG | - | chr3.1:70444448-70444467 | None:intergenic | 45.0% | |
| AGGAAGCAAACAAAGTGGAC+AGG | + | chr3.1:70444358-70444377 | MS.gene79233:CDS | 45.0% | |
| AGTATTAAGGAGACGGCCTT+TGG | - | chr3.1:70445603-70445622 | None:intergenic | 45.0% | |
| AGTTGGATCTTTCCAAGGAG+AGG | + | chr3.1:70443473-70443492 | MS.gene79233:CDS | 45.0% | |
| ATCGTCAACAACGTTGCTCT+TGG | - | chr3.1:70445038-70445057 | None:intergenic | 45.0% | |
| CAAGCTTCAGCTATTCGAGT+TGG | + | chr3.1:70443456-70443475 | MS.gene79233:CDS | 45.0% | |
| CATCCTCAGTTATCTGACCA+AGG | + | chr3.1:70446112-70446131 | MS.gene79233:CDS | 45.0% | |
| CATGAGAGCTTGTGTTGGAT+TGG | + | chr3.1:70446307-70446326 | MS.gene79233:CDS | 45.0% | |
| CCATACTCTTCAGAAGCAGA+TGG | - | chr3.1:70445632-70445651 | None:intergenic | 45.0% | |
| CTTGGTCAGATAACTGAGGA+TGG | - | chr3.1:70446114-70446133 | None:intergenic | 45.0% | |
| GAAATCCGGGTCATAGATAC+CGG | - | chr3.1:70444138-70444157 | None:intergenic | 45.0% | |
| GAGCAACGTTGTTGACGATA+TGG | + | chr3.1:70445039-70445058 | MS.gene79233:CDS | 45.0% | |
| GAGCATGAATTTCCTCTCCT+TGG | - | chr3.1:70443488-70443507 | None:intergenic | 45.0% | |
| GCTCAATGGTTATGGACCAA+AGG | + | chr3.1:70445584-70445603 | MS.gene79233:intron | 45.0% | |
| GGAACCATGGATTCCATGTA+AGG | - | chr3.1:70444110-70444129 | None:intergenic | 45.0% | |
| GGAAGCAAACAAAGTGGACA+GGG | + | chr3.1:70444359-70444378 | MS.gene79233:CDS | 45.0% | |
| GTTACTGTACCTCTCTGTGT+TGG | - | chr3.1:70444403-70444422 | None:intergenic | 45.0% | |
| TAACTGAGGATGGTAGCAAC+AGG | - | chr3.1:70446104-70446123 | None:intergenic | 45.0% | |
| TAGCAATAACACCACCGGTA+AGG | - | chr3.1:70443281-70443300 | None:intergenic | 45.0% | |
| TGTAGGACTCAATGACACCA+TGG | + | chr3.1:70444428-70444447 | MS.gene79233:CDS | 45.0% | |
| TGTGTTGCACAACACATGTG+AGG | + | chr3.1:70445290-70445309 | MS.gene79233:CDS | 45.0% | |
| TTCTGTCCACAGCAGCAAAA+AGG | - | chr3.1:70444458-70444477 | None:intergenic | 45.0% | |
| ! | CCATCTGCTTCTGAAGAGTA+TGG | + | chr3.1:70445629-70445648 | MS.gene79233:intron | 45.0% |
| ! | CCTCAGAACACTTTTGTTCC+AGG | + | chr3.1:70444555-70444574 | MS.gene79233:CDS | 45.0% |
| ! | CTCTTGCTGTCACCAACATA+AGG | - | chr3.1:70445219-70445238 | None:intergenic | 45.0% |
| ! | GGTGGTGATGATTTCAAGAG+TGG | + | chr3.1:70444702-70444721 | MS.gene79233:CDS | 45.0% |
| !! | CCTGGAACAAAAGTGTTCTG+AGG | - | chr3.1:70444558-70444577 | None:intergenic | 45.0% |
| !! | TAATAATATAATATAATAAC+CGG | - | chr3.1:70446216-70446235 | None:intergenic | 5.0% |
| !! | TGATTTATTTATTTATTTAT+TGG | + | chr3.1:70443203-70443222 | MS.gene79233:intron | 5.0% |
| AATGCCATCCTCTATGCACC+TGG | + | chr3.1:70445070-70445089 | MS.gene79233:CDS | 50.0% | |
| ACAAGCAATGGCAAACAGGG+TGG | - | chr3.1:70444502-70444521 | None:intergenic | 50.0% | |
| ACATGATCAGGATGTTCGCC+AGG | - | chr3.1:70445091-70445110 | None:intergenic | 50.0% | |
| ACTTCCCGGTATCTATGACC+CGG | + | chr3.1:70444130-70444149 | MS.gene79233:CDS | 50.0% | |
| CATGAACCTTGCTGATGCCA+TGG | + | chr3.1:70444040-70444059 | MS.gene79233:CDS | 50.0% | |
| CCTTGATACCAGCTCCTACA+AGG | - | chr3.1:70444761-70444780 | None:intergenic | 50.0% | |
| CCTTGTAGGAGCTGGTATCA+AGG | + | chr3.1:70444758-70444777 | MS.gene79233:CDS | 50.0% | |
| GAATCCATGGTTCCACTTCC+CGG | + | chr3.1:70444116-70444135 | MS.gene79233:CDS | 50.0% | |
| GAGCCTTGGTCAGATAACTG+AGG | - | chr3.1:70446118-70446137 | None:intergenic | 50.0% | |
| GAGGCCTTACATGGAATCCA+TGG | + | chr3.1:70444103-70444122 | MS.gene79233:CDS | 50.0% | |
| GATGGTAGCAACAGGGTGAA+AGG | - | chr3.1:70446096-70446115 | None:intergenic | 50.0% | |
| GGAAATTTCCTTGGAGCGGA+AGG | - | chr3.1:70445017-70445036 | None:intergenic | 50.0% | |
| GTGGATTTCCTTGTAGGAGC+TGG | + | chr3.1:70444750-70444769 | MS.gene79233:CDS | 50.0% | |
| TAGGGTAATGCTTGTGGGCT+GGG | + | chr3.1:70443236-70443255 | MS.gene79233:intron | 50.0% | |
| TGGACAGGGTTGTTGTACTC+TGG | + | chr3.1:70444373-70444392 | MS.gene79233:CDS | 50.0% | |
| TGGTGACAGCAAGAGAGCTA+TGG | + | chr3.1:70445224-70445243 | MS.gene79233:CDS | 50.0% | |
| TTAGGGTAATGCTTGTGGGC+TGG | + | chr3.1:70443235-70443254 | MS.gene79233:intron | 50.0% | |
| TTATACGTGCAGGTTCCACC+AGG | + | chr3.1:70446233-70446252 | MS.gene79233:intron | 50.0% | |
| TTATCTGACCAAGGCTCCTC+TGG | + | chr3.1:70446121-70446140 | MS.gene79233:CDS | 50.0% | |
| ! | CACATGTGAGGACTCCCTTT+TGG | + | chr3.1:70445302-70445321 | MS.gene79233:CDS | 50.0% |
| ! | CTCTCGTTTCAGGTGTCAGA+AGG | - | chr3.1:70445505-70445524 | None:intergenic | 50.0% |
| ! | GGAGAACCTTTTTGCTGCTG+TGG | + | chr3.1:70444449-70444468 | MS.gene79233:CDS | 50.0% |
| AAAAACCCTGGCCCTAGCCA+TGG | - | chr3.1:70444060-70444079 | None:intergenic | 55.0% | |
| AACGGTTCAACCCTTACCGG+TGG | + | chr3.1:70443267-70443286 | MS.gene79233:CDS | 55.0% | |
| ACCTTGCTGATGCCATGGCT+AGG | + | chr3.1:70444045-70444064 | MS.gene79233:CDS | 55.0% | |
| CCTTGCTGATGCCATGGCTA+GGG | + | chr3.1:70444046-70444065 | MS.gene79233:CDS | 55.0% | |
| CCTTGGAGCGGAAGGTTTGT+GGG | - | chr3.1:70445009-70445028 | None:intergenic | 55.0% | |
| CTTGGAGCGGAAGGTTTGTG+GGG | - | chr3.1:70445008-70445027 | None:intergenic | 55.0% | |
| GATACCGGGAAGTGGAACCA+TGG | - | chr3.1:70444123-70444142 | None:intergenic | 55.0% | |
| GATGTTCGCCAGGTGCATAG+AGG | - | chr3.1:70445081-70445100 | None:intergenic | 55.0% | |
| GCAATGGCAAACAGGGTGGA+AGG | - | chr3.1:70444498-70444517 | None:intergenic | 55.0% | |
| GGGTCATAGATACCGGGAAG+TGG | - | chr3.1:70444131-70444150 | None:intergenic | 55.0% | |
| GTCAAAGCAGCGAGCAATGC+TGG | + | chr3.1:70446277-70446296 | MS.gene79233:CDS | 55.0% | |
| TCCTTGGAGCGGAAGGTTTG+TGG | - | chr3.1:70445010-70445029 | None:intergenic | 55.0% | |
| TCTGGACTGCCAACACAGAG+AGG | + | chr3.1:70444391-70444410 | MS.gene79233:CDS | 55.0% | |
| TTAACGCACCAGAGGAGCCT+TGG | - | chr3.1:70446132-70446151 | None:intergenic | 55.0% | |
| TTCGCCAGGTGCATAGAGGA+TGG | - | chr3.1:70445077-70445096 | None:intergenic | 55.0% | |
| ! | AGGGTAATGCTTGTGGGCTG+GGG | + | chr3.1:70443237-70443256 | MS.gene79233:intron | 55.0% |
| CCCACAAACCTTCCGCTCCA+AGG | + | chr3.1:70445006-70445025 | MS.gene79233:CDS | 60.0% | |
| CCCTAGCCATGGCATCAGCA+AGG | - | chr3.1:70444049-70444068 | None:intergenic | 60.0% | |
| GCATTCACCACTGGTGTGCC+TGG | - | chr3.1:70446254-70446273 | None:intergenic | 60.0% | |
| GGAAGGTTTGTGGGGCTGAG+AGG | - | chr3.1:70445000-70445019 | None:intergenic | 60.0% | |
| TGATGCCATGGCTAGGGCCA+GGG | + | chr3.1:70444052-70444071 | MS.gene79233:CDS | 60.0% | |
| TTCACCACTGGTGTGCCTGG+TGG | - | chr3.1:70446251-70446270 | None:intergenic | 60.0% | |
| !! | GTAATGCTTGTGGGCTGGGG+TGG | + | chr3.1:70443240-70443259 | MS.gene79233:CDS | 60.0% |
| !! | GTGGGCTGGGGTGGAAACAA+CGG | + | chr3.1:70443249-70443268 | MS.gene79233:CDS | 60.0% |
| CTGATGCCATGGCTAGGGCC+AGG | + | chr3.1:70444051-70444070 | MS.gene79233:CDS | 65.0% | |
| GGTTCCACCAGGCACACCAG+TGG | + | chr3.1:70446244-70446263 | MS.gene79233:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 70442956 | 70446364 | 70442956 | ID=MS.gene79233 |
| chr3.1 | mRNA | 70442956 | 70446364 | 70442956 | ID=MS.gene79233.t1;Parent=MS.gene79233 |
| chr3.1 | exon | 70442956 | 70443143 | 70442956 | ID=MS.gene79233.t1.exon1;Parent=MS.gene79233.t1 |
| chr3.1 | CDS | 70442956 | 70443143 | 70442956 | ID=cds.MS.gene79233.t1;Parent=MS.gene79233.t1 |
| chr3.1 | exon | 70443239 | 70443307 | 70443239 | ID=MS.gene79233.t1.exon2;Parent=MS.gene79233.t1 |
| chr3.1 | CDS | 70443239 | 70443307 | 70443239 | ID=cds.MS.gene79233.t1;Parent=MS.gene79233.t1 |
| chr3.1 | exon | 70443395 | 70443530 | 70443395 | ID=MS.gene79233.t1.exon3;Parent=MS.gene79233.t1 |
| chr3.1 | CDS | 70443395 | 70443530 | 70443395 | ID=cds.MS.gene79233.t1;Parent=MS.gene79233.t1 |
| chr3.1 | exon | 70443996 | 70444243 | 70443996 | ID=MS.gene79233.t1.exon4;Parent=MS.gene79233.t1 |
| chr3.1 | CDS | 70443996 | 70444243 | 70443996 | ID=cds.MS.gene79233.t1;Parent=MS.gene79233.t1 |
| chr3.1 | exon | 70444350 | 70444576 | 70444350 | ID=MS.gene79233.t1.exon5;Parent=MS.gene79233.t1 |
| chr3.1 | CDS | 70444350 | 70444576 | 70444350 | ID=cds.MS.gene79233.t1;Parent=MS.gene79233.t1 |
| chr3.1 | exon | 70444664 | 70444779 | 70444664 | ID=MS.gene79233.t1.exon6;Parent=MS.gene79233.t1 |
| chr3.1 | CDS | 70444664 | 70444779 | 70444664 | ID=cds.MS.gene79233.t1;Parent=MS.gene79233.t1 |
| chr3.1 | exon | 70444947 | 70445123 | 70444947 | ID=MS.gene79233.t1.exon7;Parent=MS.gene79233.t1 |
| chr3.1 | CDS | 70444947 | 70445123 | 70444947 | ID=cds.MS.gene79233.t1;Parent=MS.gene79233.t1 |
| chr3.1 | exon | 70445210 | 70445398 | 70445210 | ID=MS.gene79233.t1.exon8;Parent=MS.gene79233.t1 |
| chr3.1 | CDS | 70445210 | 70445398 | 70445210 | ID=cds.MS.gene79233.t1;Parent=MS.gene79233.t1 |
| chr3.1 | exon | 70446080 | 70446142 | 70446080 | ID=MS.gene79233.t1.exon9;Parent=MS.gene79233.t1 |
| chr3.1 | CDS | 70446080 | 70446142 | 70446080 | ID=cds.MS.gene79233.t1;Parent=MS.gene79233.t1 |
| chr3.1 | exon | 70446245 | 70446364 | 70446245 | ID=MS.gene79233.t1.exon10;Parent=MS.gene79233.t1 |
| chr3.1 | CDS | 70446245 | 70446364 | 70446245 | ID=cds.MS.gene79233.t1;Parent=MS.gene79233.t1 |
| Gene Sequence |
| Protein sequence |
