Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79380.t1 | XP_013459112.1 | 100 | 35 | 0 | 0 | 1 | 35 | 14 | 48 | 8.80E-08 | 67.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79380.t1 | A0A072V4P7 | 100.0 | 35 | 0 | 0 | 1 | 35 | 14 | 48 | 6.3e-08 | 67.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050082 | MS.gene79380 | 0.804249 | 2.36E-49 | -1.69E-46 |
| MS.gene053568 | MS.gene79380 | 0.845141 | 4.89E-59 | -1.69E-46 |
| MS.gene058068 | MS.gene79380 | 0.825845 | 3.75E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79380.t1 | MTR_3g026230 | 77.593 | 241 | 15 | 6 | 1 | 204 | 14 | 252 | 1.04e-88 | 261 |
| MS.gene79380.t1 | MTR_3g026160 | 90.244 | 164 | 14 | 1 | 1 | 162 | 14 | 177 | 1.53e-78 | 233 |
| MS.gene79380.t1 | MTR_3g026160 | 61.364 | 88 | 20 | 2 | 110 | 197 | 35 | 108 | 3.82e-17 | 75.9 |
| MS.gene79380.t1 | MTR_3g026330 | 65.888 | 214 | 47 | 3 | 1 | 198 | 14 | 217 | 6.80e-67 | 209 |
| MS.gene79380.t1 | MTR_3g026330 | 65.829 | 199 | 45 | 2 | 27 | 204 | 148 | 344 | 4.35e-55 | 178 |
| MS.gene79380.t1 | MTR_3g026330 | 66.667 | 195 | 40 | 3 | 26 | 197 | 101 | 293 | 7.86e-53 | 172 |
| MS.gene79380.t1 | MTR_3g026330 | 65.289 | 121 | 34 | 3 | 20 | 140 | 225 | 337 | 2.49e-26 | 103 |
| MS.gene79380.t1 | MTR_3g026290 | 64.840 | 219 | 46 | 3 | 1 | 198 | 14 | 222 | 2.83e-65 | 205 |
| MS.gene79380.t1 | MTR_3g026290 | 62.981 | 208 | 47 | 2 | 27 | 204 | 153 | 360 | 6.54e-53 | 173 |
| MS.gene79380.t1 | MTR_3g026290 | 65.517 | 145 | 41 | 3 | 25 | 163 | 213 | 354 | 9.09e-32 | 118 |
| MS.gene79380.t1 | MTR_3g026290 | 65.455 | 110 | 32 | 3 | 23 | 129 | 247 | 353 | 6.33e-21 | 89.4 |
| MS.gene79380.t1 | MTR_3g026290 | 60.169 | 118 | 25 | 3 | 23 | 140 | 258 | 353 | 1.70e-20 | 88.2 |
| MS.gene79380.t1 | MTR_3g026240 | 53.191 | 94 | 39 | 2 | 1 | 94 | 14 | 102 | 2.26e-20 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79380.t1 | AT5G09530 | 59.545 | 220 | 51 | 6 | 13 | 197 | 30 | 246 | 1.34e-49 | 165 |
| MS.gene79380.t1 | AT5G09530 | 64.021 | 189 | 52 | 5 | 22 | 197 | 100 | 285 | 1.05e-45 | 155 |
| MS.gene79380.t1 | AT5G09530 | 62.827 | 191 | 55 | 5 | 19 | 197 | 179 | 365 | 1.06e-42 | 147 |
| MS.gene79380.t1 | AT5G09530 | 56.886 | 167 | 44 | 5 | 24 | 163 | 201 | 366 | 1.85e-29 | 112 |
| MS.gene79380.t1 | AT5G09530 | 60.440 | 91 | 28 | 2 | 22 | 106 | 282 | 370 | 1.29e-15 | 74.7 |
| MS.gene79380.t1 | AT5G09530 | 66.176 | 68 | 21 | 1 | 137 | 204 | 39 | 104 | 9.05e-11 | 60.5 |
| MS.gene79380.t1 | AT5G09520 | 45.517 | 145 | 47 | 3 | 1 | 145 | 16 | 128 | 1.45e-22 | 89.0 |
| MS.gene79380.t1 | AT5G09520 | 58.000 | 100 | 32 | 2 | 97 | 196 | 41 | 130 | 1.38e-20 | 83.6 |
| MS.gene79380.t1 | AT5G09520 | 54.651 | 86 | 35 | 1 | 123 | 204 | 34 | 119 | 1.75e-14 | 67.8 |
Find 70 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGTACCTTTGGTATTTC+TGG | 0.077856 | 3.1:-17092613 | None:intergenic |
| GGAACATCTTTAGGAGTTTC+AGG | 0.202854 | 3.1:-17092736 | None:intergenic |
| TCAGGTACCTTAGGCAATTC+TGG | 0.231204 | 3.1:-17092307 | None:intergenic |
| TCAGGTACCTTAGGTAATTC+TGG | 0.242157 | 3.1:-17092340 | None:intergenic |
| TTAGGAGTTTCAGGGAATTT+AGG | 0.242346 | 3.1:-17092727 | None:intergenic |
| AACTCTAGCTTTGGTAATTC+AGG | 0.247874 | 3.1:-17092631 | None:intergenic |
| AATTCTGGCTTTGGCAATTC+AGG | 0.265103 | 3.1:-17092325 | None:intergenic |
| ACTTTAGGTTGCTCGGGTTT+TGG | 0.275487 | 3.1:-17092475 | None:intergenic |
| AGTTCAGGCTTTGTCAATTC+AGG | 0.281138 | 3.1:-17092664 | None:intergenic |
| TTTGGCAATTCAGGGACTTT+AGG | 0.288403 | 3.1:-17092490 | None:intergenic |
| TCAGGTACCTTAGGGATATC+TGG | 0.309626 | 3.1:-17092547 | None:intergenic |
| TTTGTCAATTCAGGTATCTT+AGG | 0.317967 | 3.1:-17092655 | None:intergenic |
| TTAGGCAATTCAGGAATCTT+AGG | 0.318033 | 3.1:-17092283 | None:intergenic |
| TACCTTTGGTATTTCTGGCT+TGG | 0.319635 | 3.1:-17092608 | None:intergenic |
| AGCTCAGGCTTTGGAAGTTC+AGG | 0.319717 | 3.1:-17092358 | None:intergenic |
| AATTTAGGTAACTCGGGTTT+TGG | 0.322053 | 3.1:-17092712 | None:intergenic |
| ACCTTTGGTATTTCTGGCTT+GGG | 0.325986 | 3.1:-17092607 | None:intergenic |
| GTATTGGTTGGAACATCTTT+AGG | 0.328990 | 3.1:-17092745 | None:intergenic |
| TTAGGCAACTCGGGAACTTT+AGG | 0.329308 | 3.1:-17092439 | None:intergenic |
| TACCTTAGGGATATCTGGTT+TGG | 0.332667 | 3.1:-17092542 | None:intergenic |
| ATAGGTGGAAAATCAAGTTT+TGG | 0.353325 | 3.1:-17092244 | None:intergenic |
| ACTTTAGGTAGTTCATGTTT+TGG | 0.353892 | 3.1:-17092508 | None:intergenic |
| ACTTTGGGAAACTCGGGTTT+TGG | 0.357337 | 3.1:-17092406 | None:intergenic |
| TTAGGCAACTCAGGAACTTT+GGG | 0.358876 | 3.1:-17092421 | None:intergenic |
| TTGGGCAACTCAGAGACTTT+AGG | 0.363342 | 3.1:-17092523 | None:intergenic |
| ACCTTAGGTAATTCTGGCTT+TGG | 0.366886 | 3.1:-17092334 | None:intergenic |
| TTGGGCAACTCAGAGACTTT+TGG | 0.369313 | 3.1:-17092589 | None:intergenic |
| ACATTAACTTTAGGTAGTTC+AGG | 0.370017 | 3.1:-17092679 | None:intergenic |
| GGAAGCTCAGGCTTTGGTAT+AGG | 0.376080 | 3.1:-17092262 | None:intergenic |
| TTCAGGGACTTTAGGTTGCT+CGG | 0.381939 | 3.1:-17092482 | None:intergenic |
| AATTCTGGCTTAGGCAATTC+AGG | 0.383466 | 3.1:-17092292 | None:intergenic |
| AGTTCAGGGACATTAACTTT+AGG | 0.387475 | 3.1:-17092688 | None:intergenic |
| CTCAGGAACTTTGGGAAACT+CGG | 0.389158 | 3.1:-17092413 | None:intergenic |
| TTTAGGCAACTCAGGAACTT+TGG | 0.393082 | 3.1:-17092422 | None:intergenic |
| ATCTTAGGAAGCTCAGGCTT+TGG | 0.394512 | 3.1:-17092268 | None:intergenic |
| TTTGGTAATTCAGGTACCTT+TGG | 0.399783 | 3.1:-17092622 | None:intergenic |
| AACTTAGGTAGCTCAGGCTT+TGG | 0.406351 | 3.1:-17092367 | None:intergenic |
| TTCGGTAACTCAGGTACCTT+AGG | 0.407298 | 3.1:-17092556 | None:intergenic |
| TTTGGAAGTTCAGGTACCTT+AGG | 0.422522 | 3.1:-17092349 | None:intergenic |
| ACCTTAGGGATATCTGGTTT+GGG | 0.423518 | 3.1:-17092541 | None:intergenic |
| ATCTTAGGTAACTCTAGCTT+TGG | 0.432161 | 3.1:-17092640 | None:intergenic |
| AGTTCCAACTTAAGGAGTAT+TGG | 0.438613 | 3.1:-17092761 | None:intergenic |
| AGAGTATTACAATGGTTGTC+GGG | 0.440611 | 3.1:+17092185 | MS.gene79380:CDS |
| TTTGGCAATTCAGGTACCTT+AGG | 0.442441 | 3.1:-17092316 | None:intergenic |
| TCAGGAATCTTAGGAAGCTC+AGG | 0.462216 | 3.1:-17092274 | None:intergenic |
| ACATTAAACTTAGGTAGCTC+AGG | 0.466667 | 3.1:-17092373 | None:intergenic |
| TTTGGCAATTCAGGGAACTT+AGG | 0.478230 | 3.1:-17092457 | None:intergenic |
| TTCAGGGAATTTAGGTAACT+CGG | 0.478958 | 3.1:-17092719 | None:intergenic |
| GACAACCATTGTAATACTCT+TGG | 0.484545 | 3.1:-17092182 | None:intergenic |
| ACCTTAGGCAATTCTGGCTT+AGG | 0.484577 | 3.1:-17092301 | None:intergenic |
| AATTCAGGAACATTAAACTT+AGG | 0.490699 | 3.1:-17092382 | None:intergenic |
| GAACATCTTTAGGAGTTTCA+GGG | 0.495266 | 3.1:-17092735 | None:intergenic |
| TTCAGGGAACTTAGGCAACT+CGG | 0.499436 | 3.1:-17092449 | None:intergenic |
| TCAGGGACTTTAGGTTGCTC+GGG | 0.512283 | 3.1:-17092481 | None:intergenic |
| CCAACTTAAGGAGTATTGGT+TGG | 0.525013 | 3.1:-17092757 | None:intergenic |
| AAGAGTATTACAATGGTTGT+CGG | 0.526376 | 3.1:+17092184 | MS.gene79380:CDS |
| TCAGGAACTTTGGGAAACTC+GGG | 0.528389 | 3.1:-17092412 | None:intergenic |
| AGCTCAGGCTTTGGTATAGG+TGG | 0.530445 | 3.1:-17092259 | None:intergenic |
| TCGGTAACTCAGGTACCTTA+GGG | 0.543706 | 3.1:-17092555 | None:intergenic |
| TCAGGGAATTTAGGTAACTC+GGG | 0.549724 | 3.1:-17092718 | None:intergenic |
| TCGGGAACTTTAGGCAACTC+AGG | 0.569614 | 3.1:-17092430 | None:intergenic |
| AGCTCGGGTTTCGGTAACTC+AGG | 0.578248 | 3.1:-17092565 | None:intergenic |
| TCAGGGAACTTAGGCAACTC+GGG | 0.582113 | 3.1:-17092448 | None:intergenic |
| GCCAAAGCCAGAATTACCTA+AGG | 0.599842 | 3.1:+17092333 | MS.gene79380:CDS |
| GCCTAAGCCAGAATTGCCTA+AGG | 0.613699 | 3.1:+17092300 | MS.gene79380:CDS |
| GAGTATTACAATGGTTGTCG+GGG | 0.633099 | 3.1:+17092186 | MS.gene79380:CDS |
| GCCCAAACCAGATATCCCTA+AGG | 0.649847 | 3.1:+17092540 | MS.gene79380:CDS |
| GTCAGCCAAGAGTATTACAA+TGG | 0.663719 | 3.1:+17092177 | MS.gene79380:CDS |
| GCCCAAGCCAGAAATACCAA+AGG | 0.675655 | 3.1:+17092606 | MS.gene79380:CDS |
| TCTAGAGTCGAACATACCTG+AGG | 0.701502 | 3.1:+17092219 | MS.gene79380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATTCAGGAACATTAAACTT+AGG | - | chr3.1:17092385-17092404 | None:intergenic | 25.0% |
| ACATTAACTTTAGGTAGTTC+AGG | - | chr3.1:17092682-17092701 | None:intergenic | 30.0% | |
| TTTGTCAATTCAGGTATCTT+AGG | - | chr3.1:17092658-17092677 | None:intergenic | 30.0% | |
| ! | ACTTTAGGTAGTTCATGTTT+TGG | - | chr3.1:17092511-17092530 | None:intergenic | 30.0% |
| ! | ATAGGTGGAAAATCAAGTTT+TGG | - | chr3.1:17092247-17092266 | None:intergenic | 30.0% |
| !! | AAGAGTATTACAATGGTTGT+CGG | + | chr3.1:17092184-17092203 | MS.gene79380:CDS | 30.0% |
| ACATTAAACTTAGGTAGCTC+AGG | - | chr3.1:17092376-17092395 | None:intergenic | 35.0% | |
| AGTTCAGGGACATTAACTTT+AGG | - | chr3.1:17092691-17092710 | None:intergenic | 35.0% | |
| GACAACCATTGTAATACTCT+TGG | - | chr3.1:17092185-17092204 | None:intergenic | 35.0% | |
| TTAGGAGTTTCAGGGAATTT+AGG | - | chr3.1:17092730-17092749 | None:intergenic | 35.0% | |
| TTAGGCAATTCAGGAATCTT+AGG | - | chr3.1:17092286-17092305 | None:intergenic | 35.0% | |
| TTCAGGGAATTTAGGTAACT+CGG | - | chr3.1:17092722-17092741 | None:intergenic | 35.0% | |
| ! | AATTTAGGTAACTCGGGTTT+TGG | - | chr3.1:17092715-17092734 | None:intergenic | 35.0% |
| ! | AGAGTATTACAATGGTTGTC+GGG | + | chr3.1:17092185-17092204 | MS.gene79380:CDS | 35.0% |
| ! | ATCTTAGGTAACTCTAGCTT+TGG | - | chr3.1:17092643-17092662 | None:intergenic | 35.0% |
| ! | GAACATCTTTAGGAGTTTCA+GGG | - | chr3.1:17092738-17092757 | None:intergenic | 35.0% |
| ! | TTTGGTAATTCAGGTACCTT+TGG | - | chr3.1:17092625-17092644 | None:intergenic | 35.0% |
| !! | AACTCTAGCTTTGGTAATTC+AGG | - | chr3.1:17092634-17092653 | None:intergenic | 35.0% |
| !! | GTATTGGTTGGAACATCTTT+AGG | - | chr3.1:17092748-17092767 | None:intergenic | 35.0% |
| !!! | AAATCAAGTTTTGGAACCTC+AGG | - | chr3.1:17092238-17092257 | None:intergenic | 35.0% |
| !!! | AGTTCATGTTTTGGCAATTC+AGG | - | chr3.1:17092502-17092521 | None:intergenic | 35.0% |
| !!! | GTTCATGTTTTGGCAATTCA+GGG | - | chr3.1:17092501-17092520 | None:intergenic | 35.0% |
| GAGTATTACAATGGTTGTCG+GGG | + | chr3.1:17092186-17092205 | MS.gene79380:CDS | 40.0% | |
| TACCTTAGGGATATCTGGTT+TGG | - | chr3.1:17092545-17092564 | None:intergenic | 40.0% | |
| TCAGGGAATTTAGGTAACTC+GGG | - | chr3.1:17092721-17092740 | None:intergenic | 40.0% | |
| TCAGGTACCTTAGGTAATTC+TGG | - | chr3.1:17092343-17092362 | None:intergenic | 40.0% | |
| TCAGGTACCTTTGGTATTTC+TGG | - | chr3.1:17092616-17092635 | None:intergenic | 40.0% | |
| TTAGGCAACTCAGGAACTTT+GGG | - | chr3.1:17092424-17092443 | None:intergenic | 40.0% | |
| TTTAGGCAACTCAGGAACTT+TGG | - | chr3.1:17092425-17092444 | None:intergenic | 40.0% | |
| TTTGGAAGTTCAGGTACCTT+AGG | - | chr3.1:17092352-17092371 | None:intergenic | 40.0% | |
| TTTGGCAATTCAGGGAACTT+AGG | - | chr3.1:17092460-17092479 | None:intergenic | 40.0% | |
| TTTGGCAATTCAGGGACTTT+AGG | - | chr3.1:17092493-17092512 | None:intergenic | 40.0% | |
| TTTGGCAATTCAGGTACCTT+AGG | - | chr3.1:17092319-17092338 | None:intergenic | 40.0% | |
| ! | ACCTTAGGGATATCTGGTTT+GGG | - | chr3.1:17092544-17092563 | None:intergenic | 40.0% |
| ! | AGTTCAGGCTTTGTCAATTC+AGG | - | chr3.1:17092667-17092686 | None:intergenic | 40.0% |
| ! | GGAACATCTTTAGGAGTTTC+AGG | - | chr3.1:17092739-17092758 | None:intergenic | 40.0% |
| !! | AATTCTGGCTTAGGCAATTC+AGG | - | chr3.1:17092295-17092314 | None:intergenic | 40.0% |
| !! | AATTCTGGCTTTGGCAATTC+AGG | - | chr3.1:17092328-17092347 | None:intergenic | 40.0% |
| !! | ACCTTAGGTAATTCTGGCTT+TGG | - | chr3.1:17092337-17092356 | None:intergenic | 40.0% |
| !! | ACCTTTGGTATTTCTGGCTT+GGG | - | chr3.1:17092610-17092629 | None:intergenic | 40.0% |
| !! | GTCAGCCAAGAGTATTACAA+TGG | + | chr3.1:17092177-17092196 | MS.gene79380:CDS | 40.0% |
| !! | TACCTTTGGTATTTCTGGCT+TGG | - | chr3.1:17092611-17092630 | None:intergenic | 40.0% |
| AACTTAGGTAGCTCAGGCTT+TGG | - | chr3.1:17092370-17092389 | None:intergenic | 45.0% | |
| ATCTTAGGAAGCTCAGGCTT+TGG | - | chr3.1:17092271-17092290 | None:intergenic | 45.0% | |
| GCCAAAGCCAGAATTACCTA+AGG | + | chr3.1:17092333-17092352 | MS.gene79380:CDS | 45.0% | |
| TCAGGAATCTTAGGAAGCTC+AGG | - | chr3.1:17092277-17092296 | None:intergenic | 45.0% | |
| TCAGGTACCTTAGGCAATTC+TGG | - | chr3.1:17092310-17092329 | None:intergenic | 45.0% | |
| TCAGGTACCTTAGGGATATC+TGG | - | chr3.1:17092550-17092569 | None:intergenic | 45.0% | |
| TCGGTAACTCAGGTACCTTA+GGG | - | chr3.1:17092558-17092577 | None:intergenic | 45.0% | |
| TTAGGCAACTCGGGAACTTT+AGG | - | chr3.1:17092442-17092461 | None:intergenic | 45.0% | |
| TTCAGGGAACTTAGGCAACT+CGG | - | chr3.1:17092452-17092471 | None:intergenic | 45.0% | |
| TTCGGTAACTCAGGTACCTT+AGG | - | chr3.1:17092559-17092578 | None:intergenic | 45.0% | |
| TTGGGCAACTCAGAGACTTT+AGG | - | chr3.1:17092526-17092545 | None:intergenic | 45.0% | |
| ! | CTCAGGAACTTTGGGAAACT+CGG | - | chr3.1:17092416-17092435 | None:intergenic | 45.0% |
| ! | TCAGGAACTTTGGGAAACTC+GGG | - | chr3.1:17092415-17092434 | None:intergenic | 45.0% |
| ! | TCTAGAGTCGAACATACCTG+AGG | + | chr3.1:17092219-17092238 | MS.gene79380:CDS | 45.0% |
| ! | TTGGGCAACTCAGAGACTTT+TGG | - | chr3.1:17092526-17092545 | None:intergenic | 45.0% |
| !! | AACTCGGGTTTTGGCAATTC+AGG | - | chr3.1:17092400-17092419 | None:intergenic | 45.0% |
| !! | ACCTTAGGCAATTCTGGCTT+AGG | - | chr3.1:17092304-17092323 | None:intergenic | 45.0% |
| !! | ACTTTGGGAAACTCGGGTTT+TGG | - | chr3.1:17092409-17092428 | None:intergenic | 45.0% |
| !! | ACTTTTGGTAGCTCGGGTTT+CGG | - | chr3.1:17092577-17092596 | None:intergenic | 45.0% |
| !! | CTCAGAGACTTTTGGTAGCT+CGG | - | chr3.1:17092584-17092603 | None:intergenic | 45.0% |
| !! | TCAGAGACTTTTGGTAGCTC+GGG | - | chr3.1:17092583-17092602 | None:intergenic | 45.0% |
| !! | TTCAGGGACTTTAGGTTGCT+CGG | - | chr3.1:17092485-17092504 | None:intergenic | 45.0% |
| !!! | ACTTTAGGTTGCTCGGGTTT+TGG | - | chr3.1:17092478-17092497 | None:intergenic | 45.0% |
| GCCCAAACCAGATATCCCTA+AGG | + | chr3.1:17092540-17092559 | MS.gene79380:CDS | 50.0% | |
| GCCCAAGCCAGAAATACCAA+AGG | + | chr3.1:17092606-17092625 | MS.gene79380:CDS | 50.0% | |
| GCCTAAGCCAGAATTGCCTA+AGG | + | chr3.1:17092300-17092319 | MS.gene79380:CDS | 50.0% | |
| TCAGGGAACTTAGGCAACTC+GGG | - | chr3.1:17092451-17092470 | None:intergenic | 50.0% | |
| TCGGGAACTTTAGGCAACTC+AGG | - | chr3.1:17092433-17092452 | None:intergenic | 50.0% | |
| ! | AGCTCAGGCTTTGGTATAGG+TGG | - | chr3.1:17092262-17092281 | None:intergenic | 50.0% |
| ! | GGAAGCTCAGGCTTTGGTAT+AGG | - | chr3.1:17092265-17092284 | None:intergenic | 50.0% |
| !! | AACTCGGGTTTTGGCAGTTC+AGG | - | chr3.1:17092706-17092725 | None:intergenic | 50.0% |
| !! | ACTCGGGTTTTGGCAGTTCA+GGG | - | chr3.1:17092705-17092724 | None:intergenic | 50.0% |
| !! | AGCTCAGGCTTTGGAAGTTC+AGG | - | chr3.1:17092361-17092380 | None:intergenic | 50.0% |
| !! | GCTCGGGTTTTGGCAATTCA+GGG | - | chr3.1:17092468-17092487 | None:intergenic | 50.0% |
| !! | TCAGGGACTTTAGGTTGCTC+GGG | - | chr3.1:17092484-17092503 | None:intergenic | 50.0% |
| !! | TGCTCGGGTTTTGGCAATTC+AGG | - | chr3.1:17092469-17092488 | None:intergenic | 50.0% |
| AGCTCGGGTTTCGGTAACTC+AGG | - | chr3.1:17092568-17092587 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 17092160 | 17092774 | 17092160 | ID=MS.gene79380 |
| chr3.1 | mRNA | 17092160 | 17092774 | 17092160 | ID=MS.gene79380.t1;Parent=MS.gene79380 |
| chr3.1 | exon | 17092160 | 17092774 | 17092160 | ID=MS.gene79380.t1.exon1;Parent=MS.gene79380.t1 |
| chr3.1 | CDS | 17092160 | 17092774 | 17092160 | ID=cds.MS.gene79380.t1;Parent=MS.gene79380.t1 |
| Gene Sequence |
| Protein sequence |
