Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79793.t1 | XP_003619849.1 | 98.7 | 311 | 4 | 0 | 1 | 311 | 1 | 311 | 1.50E-176 | 628.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79793.t1 | Q9SE51 | 61.5 | 262 | 97 | 2 | 54 | 311 | 71 | 332 | 1.7e-96 | 354.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79793.t1 | G7KQ87 | 98.7 | 311 | 4 | 0 | 1 | 311 | 1 | 311 | 1.1e-176 | 628.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55980 | MS.gene79793 | PPI |
| MS.gene79793 | MS.gene058245 | PPI |
| MS.gene67725 | MS.gene79793 | PPI |
| MS.gene79793 | MS.gene00146 | PPI |
| MS.gene65650 | MS.gene79793 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79793.t1 | MTR_6g069850 | 98.714 | 311 | 4 | 0 | 1 | 311 | 1 | 311 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79793.t1 | AT3G17910 | 60.448 | 268 | 102 | 2 | 48 | 311 | 65 | 332 | 1.70e-121 | 353 |
| MS.gene79793.t1 | AT1G48510 | 38.944 | 303 | 162 | 6 | 24 | 311 | 21 | 315 | 3.43e-64 | 207 |
| MS.gene79793.t1 | AT1G48510 | 38.944 | 303 | 160 | 7 | 24 | 311 | 21 | 313 | 6.67e-64 | 206 |
| MS.gene79793.t1 | AT1G48510 | 38.284 | 303 | 165 | 6 | 24 | 311 | 21 | 316 | 8.22e-63 | 204 |
| MS.gene79793.t1 | AT1G48510 | 42.358 | 229 | 118 | 3 | 92 | 311 | 1 | 224 | 5.51e-57 | 186 |
Find 103 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGATCGTGGTGGAGATTT+TGG | 0.170725 | 6.2:+72856575 | MS.gene79793:CDS |
| ATTTCAGGAGTTACTGAAAA+TGG | 0.223891 | 6.2:+72855016 | MS.gene79793:CDS |
| GCGGAGCTCCGCGAGGATTC+TGG | 0.267249 | 6.2:-72852529 | None:intergenic |
| CCACGTTCAAGAAGCATTTC+AGG | 0.288011 | 6.2:+72855001 | MS.gene79793:CDS |
| CATCCTCTGTTAACTAGAAT+TGG | 0.310516 | 6.2:-72856460 | None:intergenic |
| GAGCAATTGCATTTGGTCTT+GGG | 0.332922 | 6.2:+72852846 | MS.gene79793:CDS |
| TGAAAGGAAAAGCTTCTAAA+TGG | 0.344815 | 6.2:+72852807 | MS.gene79793:intron |
| GGAGCAATTGCATTTGGTCT+TGG | 0.353787 | 6.2:+72852845 | MS.gene79793:CDS |
| TTACCTGGAGCAATTGCATT+TGG | 0.387630 | 6.2:+72852839 | MS.gene79793:CDS |
| TTCTGGAAGGCCGCAAGATC+GGG | 0.402652 | 6.2:-72857038 | None:intergenic |
| GGAAGAGGGTAAGGATTACT+TGG | 0.403772 | 6.2:-72857100 | None:intergenic |
| TTTGTTCCTGCAAATGATCC+TGG | 0.403973 | 6.2:+72856977 | MS.gene79793:CDS |
| CGCCGTATCTCCACCCGTAC+TGG | 0.409955 | 6.2:+72852549 | MS.gene79793:CDS |
| ACCATGTTAATATGTAGTTT+AGG | 0.414596 | 6.2:-72857171 | None:intergenic |
| AAGTGAGGAGTTAGATTCTC+TGG | 0.420653 | 6.2:+72854919 | MS.gene79793:CDS |
| GAAGACCCAGGATCATTTGC+AGG | 0.423232 | 6.2:-72856983 | None:intergenic |
| CGCGAGGATTCTGGCGGCAG+AGG | 0.430271 | 6.2:-72852520 | None:intergenic |
| AAACTTGTCTTTCCAACTGC+GGG | 0.437674 | 6.2:-72856488 | None:intergenic |
| TTGCATTTGGTCTTGGGAGT+TGG | 0.449563 | 6.2:+72852852 | MS.gene79793:CDS |
| AATGTTACAGATTAAAATGT+TGG | 0.450134 | 6.2:+72854838 | MS.gene79793:intron |
| CAATTCTAGTTAACAGAGGA+TGG | 0.450262 | 6.2:+72856461 | MS.gene79793:CDS |
| TTGCAGGAACAAATATGCTT+GGG | 0.457855 | 6.2:-72856967 | None:intergenic |
| TTTGCAGGAACAAATATGCT+TGG | 0.461261 | 6.2:-72856968 | None:intergenic |
| TAACACCTAACGAAGTGGTC+GGG | 0.463253 | 6.2:+72856924 | MS.gene79793:CDS |
| AAATGGTGGTTGTATTTACC+TGG | 0.465400 | 6.2:+72852824 | MS.gene79793:CDS |
| TTTCTGGAAGGCCGCAAGAT+CGG | 0.468311 | 6.2:-72857039 | None:intergenic |
| CAGCAGAGCTGATGCCAGTA+CGG | 0.468845 | 6.2:-72852563 | None:intergenic |
| TGATCATGAACTGGCATAAG+AGG | 0.470339 | 6.2:-72855055 | None:intergenic |
| GAATCTAACTCCTCACTTGA+CGG | 0.473964 | 6.2:-72854914 | None:intergenic |
| TACGCACCACTGAATTTCAA+TGG | 0.474966 | 6.2:-72854890 | None:intergenic |
| AGATTCTCTGGAATTTAGAA+AGG | 0.476299 | 6.2:+72854931 | MS.gene79793:CDS |
| ATTCTGGCGGCAGAGGTTGA+TGG | 0.479376 | 6.2:-72852513 | None:intergenic |
| TCTTCTTCCTCCGATTCAAA+TGG | 0.486388 | 6.2:+72852636 | MS.gene79793:CDS |
| CTGTCAGGATGATCATGAAC+TGG | 0.492334 | 6.2:-72855064 | None:intergenic |
| GAGGATGGGTTCCCCGCAGT+TGG | 0.495591 | 6.2:+72856476 | MS.gene79793:CDS |
| CCGCAAGATCGGGCAATGCT+AGG | 0.495974 | 6.2:-72857028 | None:intergenic |
| TGAGTGCTTACCATTTGAAT+CGG | 0.500805 | 6.2:-72852646 | None:intergenic |
| GCTTGTGAAGGGGAAGGAAG+TGG | 0.503225 | 6.2:-72856544 | None:intergenic |
| CCAAAATCTCCACCACGATC+TGG | 0.504975 | 6.2:-72856575 | None:intergenic |
| AATTGTTAGAAGAGAAGATA+AGG | 0.506166 | 6.2:+72852877 | MS.gene79793:CDS |
| ACGGCAGCAGCGGAGCTGAA+TGG | 0.506928 | 6.2:-72852591 | None:intergenic |
| ACTACCCCGACCACTTCGTT+AGG | 0.507230 | 6.2:-72856929 | None:intergenic |
| CCTTCCCCTTCACAAGCTGA+TGG | 0.512078 | 6.2:+72856550 | MS.gene79793:CDS |
| TGCCAGTACGGGTGGAGATA+CGG | 0.516332 | 6.2:-72852551 | None:intergenic |
| AGCAGAGCTGATGCCAGTAC+GGG | 0.517218 | 6.2:-72852562 | None:intergenic |
| TCGAGGGAAGAGGTTGCAAA+TGG | 0.520408 | 6.2:+72854865 | MS.gene79793:CDS |
| CGGAGGAAGAAGAAAGTGTT+GGG | 0.522263 | 6.2:-72852626 | None:intergenic |
| ATCAAGGCATTAACATCCTT+AGG | 0.523796 | 6.2:-72857121 | None:intergenic |
| TTGTTCCTGCAAATGATCCT+GGG | 0.533732 | 6.2:+72856978 | MS.gene79793:CDS |
| CATCACTGAACTTCGAATCA+AGG | 0.534814 | 6.2:-72857137 | None:intergenic |
| AGACCAAATGCAATTGCTCC+AGG | 0.535961 | 6.2:-72852842 | None:intergenic |
| GCATTAACATCCTTAGGAAG+AGG | 0.537524 | 6.2:-72857115 | None:intergenic |
| ATTAAAATGTTGGAGTATCG+AGG | 0.541307 | 6.2:+72854848 | MS.gene79793:CDS |
| GAGACAACCTCGCTGCTGAC+AGG | 0.542999 | 6.2:-72856607 | None:intergenic |
| ACATCCTTAGGAAGAGGGTA+AGG | 0.544644 | 6.2:-72857109 | None:intergenic |
| ATTTAGAAAGGTTGTCTGCA+AGG | 0.547498 | 6.2:+72854943 | MS.gene79793:CDS |
| TCGAAGTTCAGTGATGCCTC+AGG | 0.558011 | 6.2:+72857144 | MS.gene79793:CDS |
| TGGTTCCATCAGCTTGTGAA+GGG | 0.559259 | 6.2:-72856555 | None:intergenic |
| TAATCCTTACCCTCTTCCTA+AGG | 0.561040 | 6.2:+72857105 | MS.gene79793:CDS |
| TTTAGAAAGGTTGTCTGCAA+GGG | 0.561782 | 6.2:+72854944 | MS.gene79793:CDS |
| TGTTGGAGTATCGAGGGAAG+AGG | 0.567895 | 6.2:+72854855 | MS.gene79793:CDS |
| CTTCGTTAGGTGTTACAGAC+GGG | 0.568536 | 6.2:-72856916 | None:intergenic |
| CCTAGCATTGCCCGATCTTG+CGG | 0.570187 | 6.2:+72857028 | MS.gene79793:CDS |
| CAGTTCATGATCATCCTGAC+AGG | 0.571970 | 6.2:+72855065 | MS.gene79793:CDS |
| CTGGTTCCATCAGCTTGTGA+AGG | 0.577371 | 6.2:-72856556 | None:intergenic |
| TCGGAGGAAGAAGAAAGTGT+TGG | 0.577887 | 6.2:-72852627 | None:intergenic |
| GAAGTGGTCGGGGTAGTTCG+CGG | 0.578152 | 6.2:+72856935 | MS.gene79793:CDS |
| CATTAACATCCTTAGGAAGA+GGG | 0.579056 | 6.2:-72857114 | None:intergenic |
| AATTCTAGTTAACAGAGGAT+GGG | 0.581794 | 6.2:+72856462 | MS.gene79793:CDS |
| GGAATCAGAGACGGCAGCAG+CGG | 0.591224 | 6.2:-72852601 | None:intergenic |
| CAGCAGCGGAGCTGAATGGA+CGG | 0.599068 | 6.2:-72852587 | None:intergenic |
| GGAAGAAGAAAGTGTTGGGT+CGG | 0.602196 | 6.2:-72852622 | None:intergenic |
| GTCTGTAACACCTAACGAAG+TGG | 0.603834 | 6.2:+72856919 | MS.gene79793:CDS |
| TTAAAATGTTGGAGTATCGA+GGG | 0.604898 | 6.2:+72854849 | MS.gene79793:CDS |
| ATGTTAATATGTAGTTTAGG+TGG | 0.606805 | 6.2:-72857168 | None:intergenic |
| AACACCTAACGAAGTGGTCG+GGG | 0.607807 | 6.2:+72856925 | MS.gene79793:CDS |
| CCATCAGCTTGTGAAGGGGA+AGG | 0.608531 | 6.2:-72856550 | None:intergenic |
| GTAACACCTAACGAAGTGGT+CGG | 0.608874 | 6.2:+72856923 | MS.gene79793:CDS |
| TAGGTGTTACAGACGGGACC+TGG | 0.609434 | 6.2:-72856910 | None:intergenic |
| CCTGAAATGCTTCTTGAACG+TGG | 0.609460 | 6.2:-72855001 | None:intergenic |
| ATGATCCTGGGTCTTCTCAG+TGG | 0.611113 | 6.2:+72856990 | MS.gene79793:CDS |
| ACTTCGTTAGGTGTTACAGA+CGG | 0.614691 | 6.2:-72856917 | None:intergenic |
| GTGCTTACCATTTGAATCGG+AGG | 0.618003 | 6.2:-72852643 | None:intergenic |
| ATGGAACCATTGAAATTCAG+TGG | 0.619217 | 6.2:+72854884 | MS.gene79793:CDS |
| AAAACTTGTCTTTCCAACTG+CGG | 0.623376 | 6.2:-72856489 | None:intergenic |
| ACCTAAACTACATATTAACA+TGG | 0.626458 | 6.2:+72857170 | MS.gene79793:CDS |
| TGTTGGGTCGGAATCAGAGA+CGG | 0.630196 | 6.2:-72852610 | None:intergenic |
| AGAGCTGATGCCAGTACGGG+TGG | 0.634291 | 6.2:-72852559 | None:intergenic |
| AAGGAAAAGCTTCTAAATGG+TGG | 0.634466 | 6.2:+72852810 | MS.gene79793:intron |
| GAGCTCCGCGAGGATTCTGG+CGG | 0.639380 | 6.2:-72852526 | None:intergenic |
| CTGGCGGCAGAGGTTGATGG+TGG | 0.640892 | 6.2:-72852510 | None:intergenic |
| ATGTAGTTTAGGTGGTCCTG+AGG | 0.656016 | 6.2:-72857160 | None:intergenic |
| GGTTCCATCAGCTTGTGAAG+GGG | 0.657740 | 6.2:-72856554 | None:intergenic |
| CTCTGCCGCCAGAATCCTCG+CGG | 0.666926 | 6.2:+72852521 | MS.gene79793:CDS |
| AAGCTGATGGAACCAGATCG+TGG | 0.671297 | 6.2:+72856563 | MS.gene79793:CDS |
| TCTCCAATTCTAGTTAACAG+AGG | 0.674448 | 6.2:+72856457 | MS.gene79793:CDS |
| AACTTGTCTTTCCAACTGCG+GGG | 0.690169 | 6.2:-72856487 | None:intergenic |
| TAGAACCACTGAGAAGACCC+AGG | 0.690589 | 6.2:-72856995 | None:intergenic |
| TGGTGCGTATCCGTCAAGTG+AGG | 0.699435 | 6.2:+72854904 | MS.gene79793:CDS |
| TAAAGAGCCTGTCAGCAGCG+AGG | 0.727366 | 6.2:+72856600 | MS.gene79793:CDS |
| CAGTACGGGTGGAGATACGG+CGG | 0.747385 | 6.2:-72852548 | None:intergenic |
| CTGATGGAACCAGATCGTGG+TGG | 0.759524 | 6.2:+72856566 | MS.gene79793:CDS |
| AGATACGGCGGAGCTCCGCG+AGG | 0.770953 | 6.2:-72852536 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAATAATT+TGG | + | chr6.2:72853271-72853290 | MS.gene79793:intron | 0.0% |
| !!! | TTAATTTTTTTTTTTTTTTT+TGG | + | chr6.2:72852780-72852799 | MS.gene79793:intron | 0.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr6.2:72855706-72855725 | MS.gene79793:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr6.2:72855705-72855724 | MS.gene79793:intron | 10.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | - | chr6.2:72855670-72855689 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr6.2:72855707-72855726 | MS.gene79793:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr6.2:72855771-72855790 | MS.gene79793:intron | 15.0% |
| !! | TATCTAGATCATTAAAATAA+CGG | - | chr6.2:72854343-72854362 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr6.2:72855770-72855789 | MS.gene79793:intron | 15.0% |
| !! | TGATCTCTATAATTTATATT+AGG | + | chr6.2:72853095-72853114 | MS.gene79793:intron | 15.0% |
| !!! | AAAATGAACTTTTTCTTAAA+AGG | - | chr6.2:72852731-72852750 | None:intergenic | 15.0% |
| !!! | AAATTTTAATTATGAGAAAG+GGG | + | chr6.2:72853326-72853345 | MS.gene79793:intron | 15.0% |
| !!! | AACTATGTTTATATTGTTTT+TGG | + | chr6.2:72854077-72854096 | MS.gene79793:intron | 15.0% |
| !!! | AATGTTTTTATTGTTCAATT+TGG | - | chr6.2:72855487-72855506 | None:intergenic | 15.0% |
| !!! | AGTATTTTACTTTTGTTTTT+AGG | + | chr6.2:72856219-72856238 | MS.gene79793:intron | 15.0% |
| !!! | ATTGATTTTGATTATAAGAA+AGG | + | chr6.2:72853591-72853610 | MS.gene79793:intron | 15.0% |
| !!! | GAAATTTTAATTATGAGAAA+GGG | + | chr6.2:72853325-72853344 | MS.gene79793:intron | 15.0% |
| !!! | TGAAATTTTAATTATGAGAA+AGG | + | chr6.2:72853324-72853343 | MS.gene79793:intron | 15.0% |
| !!! | TTGATTTTGATTATAAGAAA+GGG | + | chr6.2:72853592-72853611 | MS.gene79793:intron | 15.0% |
| !!! | TTTTTTTTTTGGTATATGAA+AGG | + | chr6.2:72852791-72852810 | MS.gene79793:intron | 15.0% |
| !! | AAAAAAGAAAGAGAAATAGA+TGG | + | chr6.2:72856101-72856120 | MS.gene79793:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr6.2:72855730-72855749 | MS.gene79793:intron | 20.0% |
| !! | AACATTTATCATATGTAAAG+CGG | - | chr6.2:72855159-72855178 | None:intergenic | 20.0% |
| !! | AAGAATTATGTAGTGAAAAT+TGG | + | chr6.2:72853641-72853660 | MS.gene79793:intron | 20.0% |
| !! | AATGTTACAGATTAAAATGT+TGG | + | chr6.2:72854838-72854857 | MS.gene79793:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr6.2:72855803-72855822 | MS.gene79793:intron | 20.0% |
| !! | ATAGAGATGTAATATAATAG+TGG | - | chr6.2:72854437-72854456 | None:intergenic | 20.0% |
| !! | ATATGAAAATTGAAGAAACT+CGG | - | chr6.2:72856411-72856430 | None:intergenic | 20.0% |
| !! | ATATGTAAACAAACAACTTA+TGG | + | chr6.2:72854723-72854742 | MS.gene79793:intron | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | - | chr6.2:72855671-72855690 | None:intergenic | 20.0% |
| !! | CTTAATGCATCAAAAAATTA+TGG | - | chr6.2:72854370-72854389 | None:intergenic | 20.0% |
| !! | GATAAAAAATCAATCTATGT+GGG | + | chr6.2:72854977-72854996 | MS.gene79793:CDS | 20.0% |
| !! | GATATTTATGGAGATAATTT+AGG | + | chr6.2:72852990-72853009 | MS.gene79793:intron | 20.0% |
| !! | GGTAATAATTTAGGAAAATT+AGG | + | chr6.2:72853196-72853215 | MS.gene79793:intron | 20.0% |
| !! | GTCAGTATATAAAAATTGAA+TGG | - | chr6.2:72852921-72852940 | None:intergenic | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr6.2:72855804-72855823 | MS.gene79793:intron | 20.0% |
| !! | TAGTAGTTCTTAAATTTGAT+AGG | - | chr6.2:72855640-72855659 | None:intergenic | 20.0% |
| !!! | AGTATTTTACTTGTGTTTTT+AGG | - | chr6.2:72855348-72855367 | None:intergenic | 20.0% |
| !!! | ATTTGATAGGATCTAATTTT+AGG | - | chr6.2:72855627-72855646 | None:intergenic | 20.0% |
| !!! | CATAATTTTTTGATGCATTA+AGG | + | chr6.2:72854368-72854387 | MS.gene79793:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr6.2:72855840-72855859 | MS.gene79793:intron | 20.0% |
| !!! | TAAGTTTTTCCTTTTGATTA+AGG | + | chr6.2:72855196-72855215 | MS.gene79793:intron | 20.0% |
| !!! | TGATTTTGATTATAAGAAAG+GGG | + | chr6.2:72853593-72853612 | MS.gene79793:intron | 20.0% |
| ! | AAGAAATATTGTCGTTACTA+AGG | - | chr6.2:72854003-72854022 | None:intergenic | 25.0% |
| ! | AATTGAAGAAAGTAATTCAG+CGG | + | chr6.2:72856142-72856161 | MS.gene79793:intron | 25.0% |
| ! | AATTGTTAGAAGAGAAGATA+AGG | + | chr6.2:72852877-72852896 | MS.gene79793:CDS | 25.0% |
| ! | AATTTGATAAATTCCTCATG+TGG | + | chr6.2:72852677-72852696 | MS.gene79793:intron | 25.0% |
| ! | ACCATGTTAATATGTAGTTT+AGG | - | chr6.2:72857174-72857193 | None:intergenic | 25.0% |
| ! | ACCTAAACTACATATTAACA+TGG | + | chr6.2:72857170-72857189 | MS.gene79793:CDS | 25.0% |
| ! | ATGTTAATATGTAGTTTAGG+TGG | - | chr6.2:72857171-72857190 | None:intergenic | 25.0% |
| ! | CCAAATTTAAGCATTAAACA+AGG | - | chr6.2:72856663-72856682 | None:intergenic | 25.0% |
| ! | CGATAAAAAATCAATCTATG+TGG | + | chr6.2:72854976-72854995 | MS.gene79793:CDS | 25.0% |
| ! | CTGCTAATTAAAATTACCAA+TGG | + | chr6.2:72855599-72855618 | MS.gene79793:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr6.2:72855729-72855748 | MS.gene79793:intron | 25.0% |
| ! | TAATCTGTAACATTGTAAGA+TGG | - | chr6.2:72854832-72854851 | None:intergenic | 25.0% |
| ! | TTGAAGATGTAATGAAGTAA+TGG | - | chr6.2:72855566-72855585 | None:intergenic | 25.0% |
| !! | AAATTTTTGTTCTGTGTTTG+TGG | + | chr6.2:72854130-72854149 | MS.gene79793:intron | 25.0% |
| !! | CATCACAGTGTAATTTTTAT+AGG | - | chr6.2:72853022-72853041 | None:intergenic | 25.0% |
| !! | CCTTGTTTAATGCTTAAATT+TGG | + | chr6.2:72856660-72856679 | MS.gene79793:intron | 25.0% |
| !! | TGTTCTTTTGTGTATGATAA+TGG | - | chr6.2:72855535-72855554 | None:intergenic | 25.0% |
| !!! | GATTTTGATTATAAGAAAGG+GGG | + | chr6.2:72853594-72853613 | MS.gene79793:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr6.2:72855839-72855858 | MS.gene79793:intron | 25.0% |
| AAATTGAGCTCTTTACCAAA+AGG | - | chr6.2:72854597-72854616 | None:intergenic | 30.0% | |
| AACACCTTTGATCGATAATT+CGG | + | chr6.2:72853524-72853543 | MS.gene79793:intron | 30.0% | |
| AAGGGTTCAAATCTATTTAG+TGG | - | chr6.2:72853859-72853878 | None:intergenic | 30.0% | |
| AATCCAATAATGAAGATCGA+CGG | - | chr6.2:72853960-72853979 | None:intergenic | 30.0% | |
| AATTGAAGAAAGTAACTCAG+CGG | - | chr6.2:72855425-72855444 | None:intergenic | 30.0% | |
| ACTAGACTCTCGAATTTAAA+AGG | + | chr6.2:72855259-72855278 | MS.gene79793:intron | 30.0% | |
| AGATCAATTCAATGCATTGA+CGG | - | chr6.2:72853081-72853100 | None:intergenic | 30.0% | |
| AGGGATAATCCTTAATCAAA+AGG | - | chr6.2:72855208-72855227 | None:intergenic | 30.0% | |
| AGTTTCTCACTTCATCAATA+TGG | - | chr6.2:72853926-72853945 | None:intergenic | 30.0% | |
| ATTTCAGGAGTTACTGAAAA+TGG | + | chr6.2:72855016-72855035 | MS.gene79793:CDS | 30.0% | |
| CTAAATAGATTTGAACCCTT+TGG | + | chr6.2:72853859-72853878 | MS.gene79793:intron | 30.0% | |
| GTGAAAATTGGATAGAGATT+TGG | + | chr6.2:72853653-72853672 | MS.gene79793:intron | 30.0% | |
| GTTGACACTGGTAATAATTT+AGG | + | chr6.2:72853187-72853206 | MS.gene79793:intron | 30.0% | |
| TAAACAAGGAACGATATGAT+GGG | - | chr6.2:72856649-72856668 | None:intergenic | 30.0% | |
| TAGTGGAAAATATGTGAATG+TGG | + | chr6.2:72854042-72854061 | MS.gene79793:intron | 30.0% | |
| TGAAAGGAAAAGCTTCTAAA+TGG | + | chr6.2:72852807-72852826 | MS.gene79793:intron | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr6.2:72855714-72855733 | MS.gene79793:intron | 30.0% | |
| TGTTTACATATTATTCCCCT+GGG | - | chr6.2:72854714-72854733 | None:intergenic | 30.0% | |
| TTAAACAAGGAACGATATGA+TGG | - | chr6.2:72856650-72856669 | None:intergenic | 30.0% | |
| TTGTGTCAATTAAATTGGGA+CGG | - | chr6.2:72855666-72855685 | None:intergenic | 30.0% | |
| TTGTTTACATATTATTCCCC+TGG | - | chr6.2:72854715-72854734 | None:intergenic | 30.0% | |
| TTTAAGCCATCTACATATCA+AGG | - | chr6.2:72854544-72854563 | None:intergenic | 30.0% | |
| ! | AAGATATCATTGATGGCAAA+AGG | + | chr6.2:72856025-72856044 | MS.gene79793:intron | 30.0% |
| ! | AATTCTAGTTAACAGAGGAT+GGG | + | chr6.2:72856462-72856481 | MS.gene79793:CDS | 30.0% |
| ! | AGATATCATTGATGGCAAAA+GGG | + | chr6.2:72856026-72856045 | MS.gene79793:intron | 30.0% |
| ! | AGATGTATGATTTTTGCCAA+AGG | - | chr6.2:72853878-72853897 | None:intergenic | 30.0% |
| ! | ATGGTGGAATTTAATGCAAT+CGG | - | chr6.2:72855516-72855535 | None:intergenic | 30.0% |
| ! | ATGTTTTCATAATCTATCCC+AGG | + | chr6.2:72854694-72854713 | MS.gene79793:intron | 30.0% |
| ! | CTCTCGAATTTAAAAGGTTT+TGG | + | chr6.2:72855265-72855284 | MS.gene79793:intron | 30.0% |
| ! | GATGTATGATTTTTGCCAAA+GGG | - | chr6.2:72853877-72853896 | None:intergenic | 30.0% |
| ! | GGAAGTTTTTGATGTCAAAA+AGG | - | chr6.2:72856259-72856240 | None:intergenic | 30.0% |
| ! | TCAACATAGACAGTATTTTC+TGG | - | chr6.2:72857058-72857077 | None:intergenic | 30.0% |
| ! | TGTAATGAAGTAATGGAATC+TGG | - | chr6.2:72855559-72855578 | None:intergenic | 30.0% |
| ! | TGTTTTCATAATCTATCCCA+GGG | + | chr6.2:72854695-72854714 | MS.gene79793:intron | 30.0% |
| ! | TTGAAATGGGTCACTTATTT+TGG | + | chr6.2:72855817-72855836 | MS.gene79793:intron | 30.0% |
| !! | AAAATAATTTGGTGCTACAG+AGG | + | chr6.2:72853282-72853301 | MS.gene79793:intron | 30.0% |
| !! | AGATTCTCTGGAATTTAGAA+AGG | + | chr6.2:72854931-72854950 | MS.gene79793:CDS | 30.0% |
| !! | ATTAAAATGTTGGAGTATCG+AGG | + | chr6.2:72854848-72854867 | MS.gene79793:CDS | 30.0% |
| !! | GATCTAATTTTAGGAACCAT+TGG | - | chr6.2:72855618-72855637 | None:intergenic | 30.0% |
| !! | TGAAATGGGTCACTTATTTT+GGG | + | chr6.2:72855818-72855837 | MS.gene79793:intron | 30.0% |
| !! | TTAAAATGTTGGAGTATCGA+GGG | + | chr6.2:72854849-72854868 | MS.gene79793:CDS | 30.0% |
| !! | TTGCTATTATTTTGCGATAC+AGG | + | chr6.2:72853726-72853745 | MS.gene79793:intron | 30.0% |
| !!! | AGAATTTTTTGTGTGCCTTT+TGG | + | chr6.2:72854579-72854598 | MS.gene79793:intron | 30.0% |
| !!! | ATGATTTTGATTTACCTGTC+AGG | - | chr6.2:72855082-72855101 | None:intergenic | 30.0% |
| !!! | GCAATTTTCTAGAGCTTATA+GGG | - | chr6.2:72855305-72855324 | None:intergenic | 30.0% |
| !!! | TCTTTTGTGTATGATAATGG+TGG | - | chr6.2:72855532-72855551 | None:intergenic | 30.0% |
| !!! | TTTTTTATCAAAAGCATCCC+TGG | - | chr6.2:72853257-72853276 | None:intergenic | 30.0% |
| AAATACTTAAATGCCCTCAG+CGG | - | chr6.2:72856206-72856225 | None:intergenic | 35.0% | |
| AAATGGTGGTTGTATTTACC+TGG | + | chr6.2:72852824-72852843 | MS.gene79793:CDS | 35.0% | |
| AAGGAAAAGCTTCTAAATGG+TGG | + | chr6.2:72852810-72852829 | MS.gene79793:intron | 35.0% | |
| AATGACTTAGTCTACAAGCT+TGG | + | chr6.2:72854166-72854185 | MS.gene79793:intron | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr6.2:72855853-72855872 | MS.gene79793:intron | 35.0% | |
| ATACAGCCAACTCAAAAACA+TGG | - | chr6.2:72856380-72856399 | None:intergenic | 35.0% | |
| ATAGCAAAAGGGAAATGACA+TGG | + | chr6.2:72856065-72856084 | MS.gene79793:intron | 35.0% | |
| ATAGCGTAGTGTAATTTGGA+CGG | + | chr6.2:72853702-72853721 | MS.gene79793:intron | 35.0% | |
| ATCCAATAATGAAGATCGAC+GGG | - | chr6.2:72853959-72853978 | None:intergenic | 35.0% | |
| ATCTACCTCAGCATGATTTA+AGG | - | chr6.2:72852973-72852992 | None:intergenic | 35.0% | |
| ATGACTAGAAATCTCCTTGA+CGG | - | chr6.2:72854486-72854505 | None:intergenic | 35.0% | |
| ATGGAACCATTGAAATTCAG+TGG | + | chr6.2:72854884-72854903 | MS.gene79793:CDS | 35.0% | |
| ATTCACATTCACTGAGATAC+TGG | + | chr6.2:72853977-72853996 | MS.gene79793:intron | 35.0% | |
| ATTTAGAAAGGTTGTCTGCA+AGG | + | chr6.2:72854943-72854962 | MS.gene79793:CDS | 35.0% | |
| ATTTCCCTTGAAGTGATTGT+TGG | + | chr6.2:72855973-72855992 | MS.gene79793:intron | 35.0% | |
| ATTTCTTACTCCAGCCAATT+CGG | + | chr6.2:72854016-72854035 | MS.gene79793:intron | 35.0% | |
| CATCCTCTGTTAACTAGAAT+TGG | - | chr6.2:72856463-72856482 | None:intergenic | 35.0% | |
| CATGCTGAGGTAGATATTTA+TGG | + | chr6.2:72852978-72852997 | MS.gene79793:intron | 35.0% | |
| CATTAACATCCTTAGGAAGA+GGG | - | chr6.2:72857117-72857136 | None:intergenic | 35.0% | |
| CCATCTACATATCAAGGAAA+TGG | - | chr6.2:72854538-72854557 | None:intergenic | 35.0% | |
| CCATTTCCTTGATATGTAGA+TGG | + | chr6.2:72854535-72854554 | MS.gene79793:intron | 35.0% | |
| CGATAATCAAAGAGTGAACA+TGG | + | chr6.2:72854654-72854673 | MS.gene79793:intron | 35.0% | |
| CTTCACGAAGATATCATTGA+TGG | + | chr6.2:72856018-72856037 | MS.gene79793:intron | 35.0% | |
| GAGCTCAATTTAGTGCTTAT+TGG | + | chr6.2:72854606-72854625 | MS.gene79793:intron | 35.0% | |
| TATTTCAAGCCACTGAACTA+GGG | + | chr6.2:72856761-72856780 | MS.gene79793:intron | 35.0% | |
| TCTACATATCAAGGAAATGG+AGG | - | chr6.2:72854535-72854554 | None:intergenic | 35.0% | |
| TGAGTGCTTACCATTTGAAT+CGG | - | chr6.2:72852649-72852668 | None:intergenic | 35.0% | |
| TTAAAACGTTGCTCGTTTAC+AGG | + | chr6.2:72856886-72856905 | MS.gene79793:intron | 35.0% | |
| TTAAGGATTATCCCTTCTTG+CGG | + | chr6.2:72855213-72855232 | MS.gene79793:intron | 35.0% | |
| TTAATTATGAGAAAGGGGCA+AGG | + | chr6.2:72853331-72853350 | MS.gene79793:intron | 35.0% | |
| TTACATGTCCTGACATTTGT+CGG | + | chr6.2:72853228-72853247 | MS.gene79793:intron | 35.0% | |
| TTATCAATTGCTTGCTTTGC+AGG | + | chr6.2:72856348-72856367 | MS.gene79793:intron | 35.0% | |
| TTGCAGGAACAAATATGCTT+GGG | - | chr6.2:72856970-72856989 | None:intergenic | 35.0% | |
| TTTAGAAAGGTTGTCTGCAA+GGG | + | chr6.2:72854944-72854963 | MS.gene79793:CDS | 35.0% | |
| TTTGCAGGAACAAATATGCT+TGG | - | chr6.2:72856971-72856990 | None:intergenic | 35.0% | |
| ! | ATCAAGGCATTAACATCCTT+AGG | - | chr6.2:72857124-72857143 | None:intergenic | 35.0% |
| ! | ATTTTCCACTAGATCCGAAT+TGG | - | chr6.2:72854033-72854052 | None:intergenic | 35.0% |
| ! | CAATTCTAGTTAACAGAGGA+TGG | + | chr6.2:72856461-72856480 | MS.gene79793:CDS | 35.0% |
| ! | CATAGACAGTATTTTCTGGA+AGG | - | chr6.2:72857054-72857073 | None:intergenic | 35.0% |
| ! | GTTTTCATAATCTATCCCAG+GGG | + | chr6.2:72854696-72854715 | MS.gene79793:intron | 35.0% |
| ! | TATGATGGGAAAATGACTAG+AGG | - | chr6.2:72856635-72856654 | None:intergenic | 35.0% |
| ! | TCTCCAATTCTAGTTAACAG+AGG | + | chr6.2:72856457-72856476 | MS.gene79793:CDS | 35.0% |
| !! | AGAGTTTTGTCATGTGAATC+AGG | + | chr6.2:72854104-72854123 | MS.gene79793:intron | 35.0% |
| !! | AGTTTTGTCATGTGAATCAG+GGG | + | chr6.2:72854106-72854125 | MS.gene79793:intron | 35.0% |
| !! | GAGTTTTGTCATGTGAATCA+GGG | + | chr6.2:72854105-72854124 | MS.gene79793:intron | 35.0% |
| !! | TCAAGGAGATTTCTAGTCAT+AGG | + | chr6.2:72854486-72854505 | MS.gene79793:intron | 35.0% |
| !! | TCGATAATTCGGTGCTATTT+AGG | + | chr6.2:72853535-72853554 | MS.gene79793:intron | 35.0% |
| !!! | CTACTTCCATGTTTTTGAGT+TGG | + | chr6.2:72856371-72856390 | MS.gene79793:intron | 35.0% |
| !!! | GGCAATTTTCTAGAGCTTAT+AGG | - | chr6.2:72855306-72855325 | None:intergenic | 35.0% |
| AAACAAGAACGATCCACATG+AGG | - | chr6.2:72852693-72852712 | None:intergenic | 40.0% | |
| AAATACTTAAATGCCCCCAG+CGG | + | chr6.2:72855361-72855380 | MS.gene79793:intron | 40.0% | |
| AACCCGTCGATCTTCATTAT+TGG | + | chr6.2:72853954-72853973 | MS.gene79793:intron | 40.0% | |
| AAGTGAGGAGTTAGATTCTC+TGG | + | chr6.2:72854919-72854938 | MS.gene79793:CDS | 40.0% | |
| ACACACCTTAAATCATGCTG+AGG | + | chr6.2:72852965-72852984 | MS.gene79793:intron | 40.0% | |
| ACATATCAAGGAAATGGAGG+AGG | - | chr6.2:72854532-72854551 | None:intergenic | 40.0% | |
| ACATTTGGCTACAGTAGAGA+AGG | - | chr6.2:72854268-72854287 | None:intergenic | 40.0% | |
| ACTTGTTCTTCCTGGTGAAT+TGG | - | chr6.2:72855938-72855957 | None:intergenic | 40.0% | |
| AGAAGCCAACAATCACTTCA+AGG | - | chr6.2:72855981-72856000 | None:intergenic | 40.0% | |
| AGTGTTGTAGCTAGTGGAAT+TGG | + | chr6.2:72853792-72853811 | MS.gene79793:intron | 40.0% | |
| ATACATATTGAGCCGCAAGA+AGG | - | chr6.2:72855228-72855247 | None:intergenic | 40.0% | |
| CACTTTAGTGTTGTAGCTAG+TGG | + | chr6.2:72853786-72853805 | MS.gene79793:intron | 40.0% | |
| CATCACTGAACTTCGAATCA+AGG | - | chr6.2:72857140-72857159 | None:intergenic | 40.0% | |
| CCAGTGATATCTTTGAGTCA+TGG | + | chr6.2:72856732-72856751 | MS.gene79793:intron | 40.0% | |
| CCATGACTCAAAGATATCAC+TGG | - | chr6.2:72856735-72856754 | None:intergenic | 40.0% | |
| CGACATAGCGTAGTGTAATT+TGG | + | chr6.2:72853698-72853717 | MS.gene79793:intron | 40.0% | |
| CTACAGTAGAGAAGGAGAAT+AGG | - | chr6.2:72854260-72854279 | None:intergenic | 40.0% | |
| CTATTTCAAGCCACTGAACT+AGG | + | chr6.2:72856760-72856779 | MS.gene79793:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr6.2:72855854-72855873 | MS.gene79793:intron | 40.0% | |
| GAAGCCAACAATCACTTCAA+GGG | - | chr6.2:72855980-72855999 | None:intergenic | 40.0% | |
| GAATCTAACTCCTCACTTGA+CGG | - | chr6.2:72854917-72854936 | None:intergenic | 40.0% | |
| GATTGGATGCTCGTGTAAAA+AGG | + | chr6.2:72853048-72853067 | MS.gene79793:intron | 40.0% | |
| GCATTAACATCCTTAGGAAG+AGG | - | chr6.2:72857118-72857137 | None:intergenic | 40.0% | |
| GGGAAAGAGAGATAGAAAGA+AGG | + | chr6.2:72853614-72853633 | MS.gene79793:intron | 40.0% | |
| GTGCAAAGTGATGCAAATTG+CGG | + | chr6.2:72853754-72853773 | MS.gene79793:intron | 40.0% | |
| TAATCCTTACCCTCTTCCTA+AGG | + | chr6.2:72857105-72857124 | MS.gene79793:CDS | 40.0% | |
| TACATATTGAGCCGCAAGAA+GGG | - | chr6.2:72855227-72855246 | None:intergenic | 40.0% | |
| TACGCACCACTGAATTTCAA+TGG | - | chr6.2:72854893-72854912 | None:intergenic | 40.0% | |
| TCACGGATCACATGAAATAG+TGG | - | chr6.2:72853824-72853843 | None:intergenic | 40.0% | |
| TCTTCTTCCTCCGATTCAAA+TGG | + | chr6.2:72852636-72852655 | MS.gene79793:CDS | 40.0% | |
| TGACTAGAAATCTCCTTGAC+GGG | - | chr6.2:72854485-72854504 | None:intergenic | 40.0% | |
| TGATCATGAACTGGCATAAG+AGG | - | chr6.2:72855058-72855077 | None:intergenic | 40.0% | |
| TGTCAATTAAATTGGGACGG+AGG | - | chr6.2:72855663-72855682 | None:intergenic | 40.0% | |
| TTACCTGGAGCAATTGCATT+TGG | + | chr6.2:72852839-72852858 | MS.gene79793:CDS | 40.0% | |
| TTGTTCCTGCAAATGATCCT+GGG | + | chr6.2:72856978-72856997 | MS.gene79793:CDS | 40.0% | |
| TTTGTTCCTGCAAATGATCC+TGG | + | chr6.2:72856977-72856996 | MS.gene79793:CDS | 40.0% | |
| TTTGTTCTGTGTTTGTGGTG+AGG | + | chr6.2:72854135-72854154 | MS.gene79793:intron | 40.0% | |
| ! | ACTTCGTTAGGTGTTACAGA+CGG | - | chr6.2:72856920-72856939 | None:intergenic | 40.0% |
| ! | AGCACCGAATTATCGATCAA+AGG | - | chr6.2:72853531-72853550 | None:intergenic | 40.0% |
| ! | GAGCAATTGCATTTGGTCTT+GGG | + | chr6.2:72852846-72852865 | MS.gene79793:CDS | 40.0% |
| ! | TATCATTGATGGCAAAAGGG+AGG | + | chr6.2:72856029-72856048 | MS.gene79793:intron | 40.0% |
| !! | ACACTGTGATGTGAGTTGAT+TGG | + | chr6.2:72853031-72853050 | MS.gene79793:intron | 40.0% |
| !! | GAGATTTGGTGCATTGTTAG+CGG | + | chr6.2:72853667-72853686 | MS.gene79793:intron | 40.0% |
| AACGGTAGTTAACTACCGCT+GGG | - | chr6.2:72856207-72856188 | None:intergenic | 45.0% | |
| ACATCCTTAGGAAGAGGGTA+AGG | - | chr6.2:72857112-72857131 | None:intergenic | 45.0% | |
| ACCCTCAGAAACAGCATGTT+TGG | + | chr6.2:72855912-72855931 | MS.gene79793:intron | 45.0% | |
| AGACCAAATGCAATTGCTCC+AGG | - | chr6.2:72852845-72852864 | None:intergenic | 45.0% | |
| AGTAAACTTGGTCACAGCCT+TGG | + | chr6.2:72855888-72855907 | MS.gene79793:intron | 45.0% | |
| AGTGGCAGTGTTGTCAATCA+CGG | - | chr6.2:72853841-72853860 | None:intergenic | 45.0% | |
| ATGTAGTTTAGGTGGTCCTG+AGG | - | chr6.2:72857163-72857182 | None:intergenic | 45.0% | |
| CAGTTCATGATCATCCTGAC+AGG | + | chr6.2:72855065-72855084 | MS.gene79793:CDS | 45.0% | |
| CCTGAAATGCTTCTTGAACG+TGG | - | chr6.2:72855004-72855023 | None:intergenic | 45.0% | |
| CTAGTCATAGGCTCATGTTG+TGG | + | chr6.2:72854498-72854517 | MS.gene79793:intron | 45.0% | |
| CTGTCAGGATGATCATGAAC+TGG | - | chr6.2:72855067-72855086 | None:intergenic | 45.0% | |
| GGAAGAGGGTAAGGATTACT+TGG | - | chr6.2:72857103-72857122 | None:intergenic | 45.0% | |
| GGAGCAATTGCATTTGGTCT+TGG | + | chr6.2:72852845-72852864 | MS.gene79793:CDS | 45.0% | |
| GGGGCTGTAAGATAGCAAAA+GGG | + | chr6.2:72856054-72856073 | MS.gene79793:intron | 45.0% | |
| GTAACACCTAACGAAGTGGT+CGG | + | chr6.2:72856923-72856942 | MS.gene79793:CDS | 45.0% | |
| GTCTGTAACACCTAACGAAG+TGG | + | chr6.2:72856919-72856938 | MS.gene79793:CDS | 45.0% | |
| GTGCTTACCATTTGAATCGG+AGG | - | chr6.2:72852646-72852665 | None:intergenic | 45.0% | |
| TAACACCTAACGAAGTGGTC+GGG | + | chr6.2:72856924-72856943 | MS.gene79793:CDS | 45.0% | |
| TCCTAAGTCTTAACCCGTCA+AGG | + | chr6.2:72854469-72854488 | MS.gene79793:intron | 45.0% | |
| TGGGGCTGTAAGATAGCAAA+AGG | + | chr6.2:72856053-72856072 | MS.gene79793:intron | 45.0% | |
| TGGTTCCATCAGCTTGTGAA+GGG | - | chr6.2:72856558-72856577 | None:intergenic | 45.0% | |
| ! | ATTGATGGCAAAAGGGAGGA+TGG | + | chr6.2:72856033-72856052 | MS.gene79793:intron | 45.0% |
| ! | CTTCGTTAGGTGTTACAGAC+GGG | - | chr6.2:72856919-72856938 | None:intergenic | 45.0% |
| ! | TCGGAGGAAGAAGAAAGTGT+TGG | - | chr6.2:72852630-72852649 | None:intergenic | 45.0% |
| ! | TTGATGGCAAAAGGGAGGAT+GGG | + | chr6.2:72856034-72856053 | MS.gene79793:intron | 45.0% |
| !! | CCACGTTCAAGAAGCATTTC+AGG | + | chr6.2:72855001-72855020 | MS.gene79793:CDS | 45.0% |
| !! | CGGAGGAAGAAGAAAGTGTT+GGG | - | chr6.2:72852629-72852648 | None:intergenic | 45.0% |
| !! | GCCAAACATGCTGTTTCTGA+GGG | - | chr6.2:72855916-72855935 | None:intergenic | 45.0% |
| !! | GGAAGAAGAAAGTGTTGGGT+CGG | - | chr6.2:72852625-72852644 | None:intergenic | 45.0% |
| !! | GTTCAGCTTGTTGAACTGTC+TGG | + | chr6.2:72856839-72856858 | MS.gene79793:intron | 45.0% |
| !! | TCCTTGACGGGTTAAGACTT+AGG | - | chr6.2:72854473-72854492 | None:intergenic | 45.0% |
| !! | TTGCATTTGGTCTTGGGAGT+TGG | + | chr6.2:72852852-72852871 | MS.gene79793:CDS | 45.0% |
| !! | ATAAATAAATAATAAACATT+TGG | - | chr6.2:72854283-72854302 | None:intergenic | 5.0% |
| AACACCTAACGAAGTGGTCG+GGG | + | chr6.2:72856925-72856944 | MS.gene79793:CDS | 50.0% | |
| AACCAACACTGTCTGCGGTT+CGG | - | chr6.2:72856815-72856834 | None:intergenic | 50.0% | |
| AAGCTGATGGAACCAGATCG+TGG | + | chr6.2:72856563-72856582 | MS.gene79793:CDS | 50.0% | |
| ACGGTAGTTAACTACCGCTG+AGG | + | chr6.2:72856189-72856208 | MS.gene79793:intron | 50.0% | |
| ACGGTAGTTAACTACCGCTG+GGG | - | chr6.2:72856208-72856189 | None:intergenic | 50.0% | |
| ATGATCCTGGGTCTTCTCAG+TGG | + | chr6.2:72856990-72857009 | MS.gene79793:CDS | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr6.2:72855858-72855877 | MS.gene79793:intron | 50.0% | |
| CAACGGTAGTTAACTACCGC+TGG | - | chr6.2:72856206-72856187 | None:intergenic | 50.0% | |
| CCAAAATCTCCACCACGATC+TGG | - | chr6.2:72856578-72856597 | None:intergenic | 50.0% | |
| CGGTAGTTAACTACCGCTGA+GGG | + | chr6.2:72856190-72856209 | MS.gene79793:intron | 50.0% | |
| CTGACATTTGTCGGACACCA+GGG | + | chr6.2:72853237-72853256 | MS.gene79793:intron | 50.0% | |
| CTGGTTCCATCAGCTTGTGA+AGG | - | chr6.2:72856559-72856578 | None:intergenic | 50.0% | |
| CTGTGAACCAACACTGTCTG+CGG | - | chr6.2:72856820-72856839 | None:intergenic | 50.0% | |
| GAAGACCCAGGATCATTTGC+AGG | - | chr6.2:72856986-72857005 | None:intergenic | 50.0% | |
| GACGGAGGGAGTAGTAAACT+TGG | + | chr6.2:72855876-72855895 | MS.gene79793:intron | 50.0% | |
| GCATGTTTGGCCAATTCACC+AGG | + | chr6.2:72855925-72855944 | MS.gene79793:intron | 50.0% | |
| GCGGTAGTTAACTACCGTTG+AGG | + | chr6.2:72855380-72855399 | MS.gene79793:intron | 50.0% | |
| GCGGTAGTTAACTACCGTTG+AGG | - | chr6.2:72855399-72855380 | None:intergenic | 50.0% | |
| GGTTCCATCAGCTTGTGAAG+GGG | - | chr6.2:72856557-72856576 | None:intergenic | 50.0% | |
| GTTAACTACCGTTGAGGACC+CGG | + | chr6.2:72855386-72855405 | MS.gene79793:intron | 50.0% | |
| GTTAACTACCGTTGAGGACC+CGG | - | chr6.2:72855405-72855386 | None:intergenic | 50.0% | |
| TAGAACCACTGAGAAGACCC+AGG | - | chr6.2:72856998-72857017 | None:intergenic | 50.0% | |
| TCAACGTGTCAGCTTCGTGT+TGG | - | chr6.2:72853172-72853191 | None:intergenic | 50.0% | |
| TCCACTAGATCCGAATTGGC+TGG | - | chr6.2:72854029-72854048 | None:intergenic | 50.0% | |
| TCCAGCCAATTCGGATCTAG+TGG | + | chr6.2:72854025-72854044 | MS.gene79793:intron | 50.0% | |
| TCGAAGTTCAGTGATGCCTC+AGG | + | chr6.2:72857144-72857163 | MS.gene79793:CDS | 50.0% | |
| TCGAGGGAAGAGGTTGCAAA+TGG | + | chr6.2:72854865-72854884 | MS.gene79793:CDS | 50.0% | |
| TGATGGCAAAAGGGAGGATG+GGG | + | chr6.2:72856035-72856054 | MS.gene79793:intron | 50.0% | |
| TGTTGGGTCGGAATCAGAGA+CGG | - | chr6.2:72852613-72852632 | None:intergenic | 50.0% | |
| ! | GCTGTCAGACTTGTTCTTCC+TGG | - | chr6.2:72855946-72855965 | None:intergenic | 50.0% |
| ! | TTTCTGGAAGGCCGCAAGAT+CGG | - | chr6.2:72857042-72857061 | None:intergenic | 50.0% |
| !! | CCAGATCGTGGTGGAGATTT+TGG | + | chr6.2:72856575-72856594 | MS.gene79793:CDS | 50.0% |
| !! | CTGCGGTTCGGTTATTTGAG+TGG | - | chr6.2:72856803-72856822 | None:intergenic | 50.0% |
| !! | GATATCACTGGTTCGCTGTC+TGG | - | chr6.2:72856723-72856742 | None:intergenic | 50.0% |
| !! | GGCCAAACATGCTGTTTCTG+AGG | - | chr6.2:72855917-72855936 | None:intergenic | 50.0% |
| !! | TGCTGTTTCTGAGGGTACCA+AGG | - | chr6.2:72855908-72855927 | None:intergenic | 50.0% |
| !! | TGTCAGCGTCGTGTTGGTTT+CGG | - | chr6.2:72853430-72853449 | None:intergenic | 50.0% |
| !! | TGTTGGAGTATCGAGGGAAG+AGG | + | chr6.2:72854855-72854874 | MS.gene79793:CDS | 50.0% |
| AACCGAACCGCAGACAGTGT+TGG | + | chr6.2:72856810-72856829 | MS.gene79793:intron | 55.0% | |
| ACTACCCCGACCACTTCGTT+AGG | - | chr6.2:72856932-72856951 | None:intergenic | 55.0% | |
| AGCAGAGCTGATGCCAGTAC+GGG | - | chr6.2:72852565-72852584 | None:intergenic | 55.0% | |
| AGCGGTAGTTAACTGCTGCC+GGG | + | chr6.2:72856160-72856179 | MS.gene79793:intron | 55.0% | |
| AGCGGTAGTTAACTGCTGCC+GGG | - | chr6.2:72856179-72856160 | None:intergenic | 55.0% | |
| ATTCTGGCGGCAGAGGTTGA+TGG | - | chr6.2:72852516-72852535 | None:intergenic | 55.0% | |
| CAGCAGAGCTGATGCCAGTA+CGG | - | chr6.2:72852566-72852585 | None:intergenic | 55.0% | |
| CAGCGGTAGTTAACTGCTGC+CGG | + | chr6.2:72856159-72856178 | MS.gene79793:intron | 55.0% | |
| CAGCGGTAGTTAACTGCTGC+CGG | - | chr6.2:72856178-72856159 | None:intergenic | 55.0% | |
| CCATCAGCTTGTGAAGGGGA+AGG | - | chr6.2:72856553-72856572 | None:intergenic | 55.0% | |
| CCTAGCATTGCCCGATCTTG+CGG | + | chr6.2:72857028-72857047 | MS.gene79793:CDS | 55.0% | |
| CCTGACATTTGTCGGACACC+AGG | + | chr6.2:72853236-72853255 | MS.gene79793:intron | 55.0% | |
| CCTGGTGTCCGACAAATGTC+AGG | - | chr6.2:72853239-72853258 | None:intergenic | 55.0% | |
| CCTTCCCCTTCACAAGCTGA+TGG | + | chr6.2:72856550-72856569 | MS.gene79793:CDS | 55.0% | |
| CGAAGCTGACACGTTGACAC+TGG | + | chr6.2:72853175-72853194 | MS.gene79793:intron | 55.0% | |
| CGGTAGTTAACTACCGCTGG+GGG | - | chr6.2:72855377-72855396 | None:intergenic | 55.0% | |
| CGTTGCTCGTTTACAGGACC+AGG | + | chr6.2:72856892-72856911 | MS.gene79793:intron | 55.0% | |
| CTGATGGAACCAGATCGTGG+TGG | + | chr6.2:72856566-72856585 | MS.gene79793:CDS | 55.0% | |
| GCAGTTTCGCCCTAGTTCAG+TGG | - | chr6.2:72856773-72856792 | None:intergenic | 55.0% | |
| GCTTGTGAAGGGGAAGGAAG+TGG | - | chr6.2:72856547-72856566 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr6.2:72855862-72855881 | MS.gene79793:intron | 55.0% | |
| GTTTACTACTCCCTCCGTCC+CGG | - | chr6.2:72855875-72855894 | None:intergenic | 55.0% | |
| TAAAGAGCCTGTCAGCAGCG+AGG | + | chr6.2:72856600-72856619 | MS.gene79793:CDS | 55.0% | |
| TGCCAGTACGGGTGGAGATA+CGG | - | chr6.2:72852554-72852573 | None:intergenic | 55.0% | |
| TGGTGCGTATCCGTCAAGTG+AGG | + | chr6.2:72854904-72854923 | MS.gene79793:CDS | 55.0% | |
| ! | TAGGTGTTACAGACGGGACC+TGG | - | chr6.2:72856913-72856932 | None:intergenic | 55.0% |
| ! | TCGACTTGTCAGCGTCGTGT+TGG | - | chr6.2:72853436-72853455 | None:intergenic | 55.0% |
| ! | TTCTGGAAGGCCGCAAGATC+GGG | - | chr6.2:72857041-72857060 | None:intergenic | 55.0% |
| !! | CACTGGTTCGCTGTCTGGTT+TGG | - | chr6.2:72856718-72856737 | None:intergenic | 55.0% |
| !! | GTCAGCGTCGTGTTGGTTTC+GGG | - | chr6.2:72853429-72853448 | None:intergenic | 55.0% |
| !! | TCAGCGTCGTGTTGGTTTCG+GGG | - | chr6.2:72853428-72853447 | None:intergenic | 55.0% |
| AACTGCTGCCGGGTCCTCAA+CGG | + | chr6.2:72856170-72856189 | MS.gene79793:intron | 60.0% | |
| AACTGCTGCCGGGTCCTCAA+CGG | - | chr6.2:72856189-72856170 | None:intergenic | 60.0% | |
| AGAGCTGATGCCAGTACGGG+TGG | - | chr6.2:72852562-72852581 | None:intergenic | 60.0% | |
| CAGCAGCGGAGCTGAATGGA+CGG | - | chr6.2:72852590-72852609 | None:intergenic | 60.0% | |
| CAGTACGGGTGGAGATACGG+CGG | - | chr6.2:72852551-72852570 | None:intergenic | 60.0% | |
| CCGCAAGATCGGGCAATGCT+AGG | - | chr6.2:72857031-72857050 | None:intergenic | 60.0% | |
| GAAGTGGTCGGGGTAGTTCG+CGG | + | chr6.2:72856935-72856954 | MS.gene79793:CDS | 60.0% | |
| GAGACAACCTCGCTGCTGAC+AGG | - | chr6.2:72856610-72856629 | None:intergenic | 60.0% | |
| GGAATCAGAGACGGCAGCAG+CGG | - | chr6.2:72852604-72852623 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr6.2:72855861-72855880 | MS.gene79793:intron | 60.0% | |
| ACGGCAGCAGCGGAGCTGAA+TGG | - | chr6.2:72852594-72852613 | None:intergenic | 65.0% | |
| CGCCGTATCTCCACCCGTAC+TGG | + | chr6.2:72852549-72852568 | MS.gene79793:CDS | 65.0% | |
| CTCTGCCGCCAGAATCCTCG+CGG | + | chr6.2:72852521-72852540 | MS.gene79793:CDS | 65.0% | |
| GAGCTCCGCGAGGATTCTGG+CGG | - | chr6.2:72852529-72852548 | None:intergenic | 65.0% | |
| ! | GAGGATGGGTTCCCCGCAGT+TGG | + | chr6.2:72856476-72856495 | MS.gene79793:CDS | 65.0% |
| !! | CTGGCGGCAGAGGTTGATGG+TGG | - | chr6.2:72852513-72852532 | None:intergenic | 65.0% |
| AGATACGGCGGAGCTCCGCG+AGG | - | chr6.2:72852539-72852558 | None:intergenic | 70.0% | |
| CGCGAGGATTCTGGCGGCAG+AGG | - | chr6.2:72852523-72852542 | None:intergenic | 70.0% | |
| GCGGAGCTCCGCGAGGATTC+TGG | - | chr6.2:72852532-72852551 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 72852507 | 72857195 | 72852507 | ID=MS.gene79793 |
| chr6.2 | mRNA | 72852507 | 72857195 | 72852507 | ID=MS.gene79793.t1;Parent=MS.gene79793 |
| chr6.2 | exon | 72852507 | 72852657 | 72852507 | ID=MS.gene79793.t1.exon1;Parent=MS.gene79793.t1 |
| chr6.2 | CDS | 72852507 | 72852657 | 72852507 | ID=cds.MS.gene79793.t1;Parent=MS.gene79793.t1 |
| chr6.2 | exon | 72852813 | 72852898 | 72852813 | ID=MS.gene79793.t1.exon2;Parent=MS.gene79793.t1 |
| chr6.2 | CDS | 72852813 | 72852898 | 72852813 | ID=cds.MS.gene79793.t1;Parent=MS.gene79793.t1 |
| chr6.2 | exon | 72854848 | 72855086 | 72854848 | ID=MS.gene79793.t1.exon3;Parent=MS.gene79793.t1 |
| chr6.2 | CDS | 72854848 | 72855086 | 72854848 | ID=cds.MS.gene79793.t1;Parent=MS.gene79793.t1 |
| chr6.2 | exon | 72856450 | 72856621 | 72856450 | ID=MS.gene79793.t1.exon4;Parent=MS.gene79793.t1 |
| chr6.2 | CDS | 72856450 | 72856621 | 72856450 | ID=cds.MS.gene79793.t1;Parent=MS.gene79793.t1 |
| chr6.2 | exon | 72856908 | 72857195 | 72856908 | ID=MS.gene79793.t1.exon5;Parent=MS.gene79793.t1 |
| chr6.2 | CDS | 72856908 | 72857195 | 72856908 | ID=cds.MS.gene79793.t1;Parent=MS.gene79793.t1 |
| Gene Sequence |
| Protein sequence |
